Digital Commons Network^™

Beyond Covid-19: Designing Inclusive Public Health Surveillance By Including Wastewater Monitoring, Rochelle H. Holm, Na'taki Osborne Jelks, Rebecca Schneider, Ted Smith

Faculty Scholarship

Wastewater-based epidemiology is a promising and expanding public health surveillance method. The current wastewater testing trajectory to monitor primarily at community wastewater treatment plants was necessitated by immediate needs of the pandemic. Going forward, specific consideration should be given to monitoring vulnerable and underserved communities to ensure inclusion and rapid response to public health threats. This is particularly important when clinical testing data are insufficient to characterize community virus levels and spread in specific locations. Now is a timely call to action for equitably protecting health in the United States, which can be guided with intentional and inclusive wastewater monitoring.

Sustainability Analysis: Large-Scale Desalination Implications For Coastal California, Elizabeth H. Whitford

Master's Projects and Capstones

In response to prolonged drought, desalination is gaining popularity as an alternative water production method for fresh water. However, water desalting technology poses concerns; the process is energy intensive, creates brine waste, and has the potential to damage sensitive coastal ecosystems. Significant research is available on the technological, economic, and energy efficiency aspects of desalination, while only a small percentage of the current literature focuses on environmental impacts. This research analyzes the desalination literature holistically in terms of both energy consumption and environmental impacts by conducting 1) a historical and current state review of the sector, 2) a technology analysis …

Evaluating The Ability Of Constructed Intertidal Eastern Oyster (Crassostrea Virginica) Reefs To Address Shoreline Erosion In South Carolina, Peter R. Kingsley-Smith, Andrew W. Tweel, Sharleen P. Johnson, Gary W. Sundin, Michael S. Hodges, Benjamin W. Stone, Gregory D. Sorg, Denise M. Sanger

Journal of South Carolina Water Resources

The application of nature-based solutions to address shoreline erosion and the loss of salt marsh in coastal South Carolina has centered around the creation of intertidal oyster (Crassostrea virginica) reefs that act as natural breakwaters. The installation of such living shoreline materials often results in a rapid accumulation of fine sediments, followed by wild oyster recruitment to suitable materials, and then more gradually the growth of salt marshes (primarily Spartina alterniflora). Leveraging more than two decades of oyster reef restoration and living shorelines research at the South Carolina Department of Natural Resources, this study quantitatively assessed performance rates for both …

Uncover The Underground : Distribution And Population Status Of Blind Snakes And Bogadek’S Burrowing Lizards, Man Ho Chan

Lingnan Theses (MPhil & PhD)

Globally, 28% of the reptiles are fossorial. Fossorial reptiles, which perform important ecological functions, such as being ecosystem engineers, top predators and bioindicators, are indispensable members of the soil ecosystem. However, the ecology of fossorial reptiles is relatively little known because of their cryptic behavior and rarity. In Hong Kong, there are four species of fossorial reptile, three of which are rare and of potential conservation concern. Among the four fossorial reptile species that occur in Hong Kong, Indotyphlops lazelli and Dibamus bogadeki, are endemic to Hong Kong and are globally threatened species. On the other hand, the distribution …

Characterizing Spatial Variability In Soil Co2 Fluxes In The Chihuahuan Desert Using Geostatistical Techniques, Viridiana Orona

Open Access Theses & Dissertations

Spatial variability in soil CO2 efflux across landscapes is an important feature of the â??Critical Zoneâ?? within dryland ecosystems. In dryland critical zones, resources are often distributed in patches or resource islands. Although this is particularly true in natural settings, the significance of spatial variability in CO2 efflux and its patterns also extends to dryland agriculture. In both irrigated and unirrigated systems, human management practices can significantly impact both organic and inorganic carbon cycling processes, highlighting the importance of studying CO2 efflux in these systems. We examined the spatial patterns of soil CO2 efflux and quantified the magnitude and scale …

Online Dashboards For Sars-Cov-2 Wastewater Data Need Standard Best Practices: An Environmental Health Communication Agenda, Colleen C. Naughton, Rochelle H. Holm, Nancy J. Lin, Brooklyn P. James, Ted Smith

Faculty Scholarship

The COVID-19 pandemic has highlighted the benefits of wastewater surveillance to supplement clinical data. Numerous online information dashboards have been rapidly, and typically independently, developed to communicate environmental surveillance data to public health officials and the public. In this study, we review dashboards presenting SARS-CoV-2 wastewater data and propose a path toward harmonization and improved risk communication. A list of 127 dashboards representing 27 countries was compiled. The variability was high and encompassed aspects including the graphics used for data presentation (e.g., line/bar graphs, maps, and tables), log versus linear scale, and 96 separate ways of labeling SARS-CoV-2 wastewater concentrations. …

Detection Of A Diverse Endophyte Assemblage Within Fungal Communities Associated With The Arundo Leaf Miner, Lasioptera Donacis (Diptera: Cecidomyiidae), Marie-Claude Bon, John A. Goolsby, Guy Mercadier, Fatiha Guermache, Javid Kashef, Massimo Cristofaro, Ann T. Vacek, Alan Kirk

School of Earth, Environmental, and Marine Sciences Faculty Publications and Presentations

The larvae of Lasioptera donacis Coutin feed on fungal communities lining galleries within the mesophyll of leaf sheaths of Arundo donax in an aggregative manner. It has been stated that L. donacis could have established a fundamental symbiotic relationship with one fungus, although the fungal composition of these communities remains unsettled. Using a culture-dependent approach and ITS sequencing, the present work characterizes and compares the fungal communities associated with L. donacis in Eurasia with the endophytes of A. donax in Texas where L. donacis is absent. The 65 cultivable isolates obtained from L. donacis fungal communities were sorted into 15 …

Predicting Groundwater Spring Locations From Topographic And Climatic Data Using Maxent Modeling, Ayten Ece Koc

USF Tampa Graduate Theses and Dissertations

The World Resources Institute reveals that 17 countries face extremely high levels of water stress. Moreover, with increasing population and industrialization, the gap between water supply and demand increases day by day around the world. Groundwater is a key freshwater source, and springs are important resources as they enable to access groundwater. Therefore, it is crucial to monitor, protect, and manage groundwater springs. The first step in spring management is to recognize and define freshwater resources and to determine the locations of groundwater springs that serve as natural discharge points. Traditionally, field studies have been employed to determine the locations …

Agroforestry For The Future: Motivations Behind Tasmanian Farmers Planting Trees, Josh Lipp

Independent Study Project (ISP) Collection

Agroforestry is the act of combining farming and tree planting, and many Tasmanian farmers are starting to plant trees on their properties for multiple reasons. Through conducting 9 interviews with farmers and researchers and visiting field sites, 3 main themes were identified to answer the question: why are Tasmanian farmers planting trees, and what are the benefits and downsides to agroforestry? Interviews help us understand farmers’ perceptions of agroforestry, and field data collection will prove the benefits of agroforestry in the future. Tasmania was chosen as the location of study as it is a state in Australia that largely focuses …

Benthic Habitat Mapping Of Mountain Top Bank Within The Northern Gulf Of Mexico Through Integrated Geophysical And Visual Data Analysis, Bethany Pertain

Master's Theses

Mesophotic coral ecosystems (MCEs) are among the seafloor ecosystems that have been poorly studied throughout the world’s oceans, but they are a vital and diverse ecosystem that should be prioritized for future mapping and ecological studies. Priority should be given to them because they possess natural, social, and economic values, and face a variety of threats, all of which, if not better understood will result in the loss of this unique ecosystem. Insights into these ecosystems, among other deep-sea environments, are lacking due to difficulty accessing them, inherent lag between data collection by an autonomous system and observation by a …

Cascading Effects Of Cover Crops On The Subsequent Cash Crop Defense Against The Polyphagous Herbivore Fall Armyworm (Spodoptera Frugiperda), Adegboyega Fajemisin, Alexis Racelis, Rupesh R. Kariyat

School of Earth, Environmental, and Marine Sciences Faculty Publications and Presentations

Simple Summary

Development Of A Benchmark Eddy Flux Evapotranspiration Dataset For Evaluation Of Satellite-Driven Evapotranspiration Models Over The Conus, John M. Volk, Justin Huntington, Forrest S. Melton, Richard Allen, Martha C. Anderson, Joshua B. Fisher, Ayse Kilic, Gabriel Senay, Gregory Halverson, Kyla Knipper, Blake Minor, Christopher Pearson, Tianxin Wang, Yun Yang, Steven Evett, Andrew N. French, Richard Jasoni, William Kustas

School of Natural Resources: Faculty Publications

A large sample of ground-based evapotranspiration (ET) measurements made in the United States, primarily from eddy covariance systems, were post-processed to produce a benchmark ET dataset. The dataset was produced primarily to support the intercomparison and evaluation of the OpenET satellite-based remote sensing ET (RSET) models and could also be used to evaluate ET data from other models and approaches. OpenET is a web-based service that makes field-delineated and pixel-level ET estimates from well-established RSET models readily available to water managers, agricultural producers, and the public. The benchmark dataset is composed of flux and meteorological data from a variety of …

Role Of Social Determinants Of Health In Differential Respiratory Exposure And Health Outcomes Among Children, Jagadeesh Puvvula, Jill A. Poole, Yeongjin Gwon, Eleanor G. Rogan, Jesse E. Bell

School of Natural Resources: Faculty Publications

Background Attributes defining the Social Determinants of Health (SDoH) are associated with disproportionate exposures to environmental hazards and differential health outcomes among communities. The dynamics between SDoH, disproportionate environmental exposures, and differential health outcomes are often specific to micro-geographic areas.

Methods This study focused on children less than 20 years of age who lived in Douglas County, Nebraska, during 2016–2019. To assess the role of SDoH in differential exposures, we evaluated the association between SDoH metrics and criteria pollutant concentrations and the association between SDoH and pediatric asthma exacerbations to quantify the role of SDoH in differential pediatric asthma outcomes. …

Panarchy Theory For Convergence, Shana M. Sundstrom, David G. Angeler, Jesse Bell, Michael J. Hayes, Jennifer Hodbod, Babak Jalalzadeh‑Fard, Rezaul Mahmood, Elizabeth Vanwormer, Craig R. Allen

School of Natural Resources: Faculty Publications

Coping with surprise and uncertainty resulting from the emergence of undesired and unexpected novelty or the sudden reorganization of systems at multiple spatiotemporal scales requires both a scientific process that can incorporate diverse expertise and viewpoints, and a scientific framework that can account for the structure and dynamics of interacting social-ecological systems (SES) and the inherent uncertainty of what might emerge in the future. We argue that combining a convergence scientific process with a panarchy framework provides a pathway for improving our understanding of, and response to, emergence. Emergent phenomena are often unexpected (e.g., pandemics, regime shifts) and can be …

Drought Influences Annual Survival Of Painted Turtles In Western Nebraska, Allyson N. Beard, Larkin Powell

School of Natural Resources: Faculty Publications

Aquatic habitats in the Great Plains of North America have increased risk of droughts under climate forecasts. Droughts have the potential to influence the population dynamics of pond turtles, and long-term studies are useful to assess the impact of climatic variation on turtles. We compiled twelve years of mark-recapture data for painted turtles (Chrysemys picta) captured in a pond in Keith County, Nebraska during 2005–2016 that included two periods of drought. We used a robust design analysis to investigate influences on population size, annual survival, temporary immigration, and capture probability. Estimates of the annual population size ranged from 92 (CI: …

Role Of Social Determinants Of Health In Differential Respiratory Exposure And Health Outcomes Among Children, Jagadeesh Puvvula, Jill A. Poole, Yeongjin Gwon, Eleanor G. Rogan, Jesse E. Bell

Daugherty Water for Food Global Institute: Faculty Publications

Background Attributes defining the Social Determinants of Health (SDoH) are associated with disproportionate exposures to environmental hazards and differential health outcomes among communities. The dynamics between SDoH, disproportionate environmental exposures, and differential health outcomes are often specific to micro-geographic areas.

Methods This study focused on children less than 20 years of age who lived in Douglas County, Nebraska, during 2016–2019. To assess the role of SDoH in differential exposures, we evaluated the association between SDoH metrics and criteria pollutant concentrations and the association between SDoH and pediatric asthma exacerbations to quantify the role of SDoH in differential pediatric asthma outcomes. …

Changing Blow Fly (Diptera: Calliphoridae) Populations In Orlando, Florida, United States, Amanda Roe, Russell J. Barnes, Leon G. Higley, Neal H. Haskell

School of Natural Resources: Faculty Publications

Blow flies (Diptera: Calliphoridae) were collected from various carrion baits in Orlando, Florida over 2 periods: Jun 2009 to Sep 2009 and Apr 2010 to Oct 2010. In a previous study conducted from 2002 to 2004 the dominant blow fly in Orlando, Florida, was Lucilia coeruleiviridis Macquart (Gruner et al. 2007). This collection documents a shift to Chrysomya megacephala Fabricius, as the most dominant blow fly species found in Orlando, Florida in 2009 to 2010. These field results have potential forensic implications, particularly in the analysis of cold cases.

Integrating Robotics Into Wildlife Conservation: Testing Improvements To Predator Deterrents Through Movement, Stewart W. Breck, Jeffrey T. Schultz, David Prause, Cameron Krebs, Anthony J. Giordano, Byron Boots

United States Department of Agriculture Wildlife Services: Staff Publications

Background Agricultural and pastoral landscapes can provide important habitat for wildlife conservation, but sharing these landscapes with wildlife can create conflict that is costly and requires managing. Livestock predation is a good example of the challenges involving coexistence with wildlife across shared landscapes. Integrating new technology into agricultural practices could help minimize human-wildlife conflict. In this study, we used concepts from the fields of robotics (i.e., automated movement and adaptiveness) and agricultural practices (i.e., managing livestock risk to predation) to explore how integration of these concepts could aid the development of more effective predator deterrents.

Methods …

Changing Blowfly (Diptera: Calliphoridae) Populations In Orlando, Florida, United States, A. Roe, R. J. Barnes, Leon G. Higley, N. H. Haskell

School of Natural Resources: Faculty Publications

No abstract provided.

Carnivore And Ungulate Occurrence In A Fire-Prone Region, Sara J. Moriarty-Graves

Cal Poly Humboldt theses and projects

Increasing fire size and severity in the western United States causes changes to ecosystems, species’ habitat use, and interspecific interactions. Wide-ranging carnivore and ungulate mammalian species and their interactions may be influenced by an increase in fire activity in northern California. Depending on the fire characteristics, ungulates may benefit from burned habitat due to an increase in forage availability, while carnivore species may be differentially impacted, but ultimately driven by bottom-up processes from a shift in prey availability. I used a three-step approach to estimate the single-species occupancy of four large mammal species: mountain lion (Puma concolor), coyote …

Small Mammal Community Structure And Bait Preference In Missouri Prairie Patches, Sofia L. Orlando

MSU Graduate Theses

Ecological community studies provide insights on how species interact with biotic and abiotic factors in an ecosystem. Community assembly is dynamic and often mediated by stochastic processes or deterministic properties. Establishing patterns in community composition could help to predict the suitability of a patch, which is crucial in endangered ecosystems. Small mammals are a model indicator for community change as their populations experience perplexing fluctuations. Many mechanisms have been proposed to drive small mammal species composition, but inconsistencies in past studies warrant further investigation. A previous study on prairie patches in Missouri revealed that there was an unknown catalyst for …

Using Machine Learning Classification And Esa Sentinel 2 Multispectral Imager Data To Delineate Marsh Vegetation And Measure Ecotone Movement In Coastal Georgia, Thomas A. Pudil

Electronic Theses and Dissertations

Tidal marshes are unique communities that are subjected to environmental stressors including sea level rise, salinity change, and drought, resulting in constant change. It is important to monitor these changing areas because of the ecosystem services they provide to us, such as protection from storms and carbon sequestration. The proposed work for this thesis project is focused on the study of tidal marshes and the dynamics between the vegetation species within them. The aim of this project is to use geospatial technology and analyses, along with machine learning classification methods, to monitor change in these valuable ecosystems. The Georgia coast …

Refining The Use Of Stable Isotope Analysis In Detecting Wildlife Laundering, Kevin Guilfoyle

Electronic Theses and Dissertations, 2020-2023

The international wildlife trade has caused significant declines in wild populations. Captive breeding can reduce the pressure on wild populations caused by overcollection, but if not properly monitored, wildlife laundering can lead to further population declines. Improving the forensic ability to detect wildlife laundering will assist in monitoring the wildlife trade and enforcing regulations, thereby aiding recovery of wild populations. Stable isotope analysis has grown in importance as a forensic tool, but improvements are needed. Here, stable isotope analysis (δ13C) on eggshells of captive bred and wild sourced island apple snails (Pomacea maculata) distinguished between the two; eggshells of captive …

Dormant Propagules In Demographic Studies: A Recurrent Bias And Potential Solutions, Federico Borghesi

Graduate Thesis and Dissertation 2023-2024

In the face of unprecedented anthropogenic change, we increasingly turn to emergent technologies and extensive data sets for solutions that complement much needed systemic changes in our societies. These technological solutions, however, must be approached with care. We must recognize and address biases in the way data has been accumulated. In demographic studies, dormant life stages, such as seed banks, and other cryptic factors have often been neglected. The potential consequences of these omissions have been extensively described in the literature. In the first chapter, I analyze patterns of seed bank omissions in demographic models, finding unjustified omissions are widespread …

Effects Of Agricultural Chemicals On Native Plants Of The Northern Great Plains, Gabrielle Bolwerk

Electronic Theses and Dissertations

Agricultural chemicals are ubiquitous on the Northern Great Plains landscape and have negative impacts on non-target plant communities, even at small doses. Northern Great Plains grassland plant communities may experience herbicide drift from agricultural fields or be subject to livestock pharmaceuticals in grazing lands. My research objective was to evaluate if and how native plants are affected by agricultural chemical presence at different concentrations. In Chapter 2, I studied the effect of different concentrations of three common agricultural herbicides (2,4-D, atrazine, and trifluralin) on the germination, emergence, and growth of native plant species of the Northern Great Plains. I performed …

Population Density Of The Small Indian Mongoose (Urva Auropunctata) Across Multiple Habitat Types And Seasons In Puerto Rico, Are R. Berentsen, Caroline C. Sauvé, Mel J. Rivera-Rodriguez, Fabiola B. Torres-Toledo, Richard B. Chipman, Amy T. Gilbert

United States Department of Agriculture Wildlife Services: Staff Publications

The small Indian mongoose (Urva auropunctata) is a rabies reservoir on several Caribbean Islands including Puerto Rico. In the continental United States, oral rabies vaccination (ORV) has been used to control and locally eliminate rabies viruses targeting meso-carnivores including raccoons (Procyon lotor), grey foxes (Urocyon cinereoargenteus), and coyotes (Canis latrans), and has more recently been proposed to mitigate and control mongoose rabies in Puerto Rico. A fundamental understanding of the population density of the target species is an important factor in planning bait application rates prior to ORV operations. In Puerto Rico, …

Comparison Of Daily Activity Patterns Across Seasons Using Gps Telemetry And Camera Trap Data For A Widespread Mammal, David W. Wolfson, Peter E. Schlichting, Raoul K. Boughton, Ryan S. Miller, Kurt C. Vercauteren, Jesse S. Lewis

United States Department of Agriculture Wildlife Services: Staff Publications

Daily activity patterns of animals can be dynamic across seasons in response to changing environmental conditions. Daily activity, though, has rarely been evaluated in relation to multiple factors (for example, seasons, demographics, and data collection methods), which could be important for understanding what drives activity patterns. Here, we evaluated the daily activity patterns of a widespread invasive species, wild pigs (Sus scrofa), across two ecologically different study areas at Buck Island Ranch, Florida, and Tejon Ranch, California (United States), from 2015 to 2018. Using GPS telemetry data (62 individuals in Florida, 21 individuals in California) and detections from …

Examining The Effects Of Seed Mix Diversity And Composition, Biochar Application, Seeding Rate, Species Identity, And Topography On Palouse Prairie Restoration, Thurman Johnson

EWU Masters Thesis Collection

With over 99.9% of the Palouse prairie lost to land conversion, restoring native plant communities is crucial for ecological function, however, research on Palouse prairie restoration methods is sparse. Seed-based restoration uses a mix of seeded species to enhance competition against weeds, diversify vegetation, and adapt to environmental conditions. However, many factors can be varied, such as seed mix diversity and composition, the proportion of forbs to grasses, and seeding rate, and the most effective levels of each are not clear. Further, soil amendments, such as biochar, may benefit properties of tilled soils, but have not explored in Palouse Prairie …

Fairy Shrimp (Anostraca) In The Vernal Pools Of Eastern Washington, Megan Garvey

EWU Masters Thesis Collection

Vernal pools are ephemeral wetlands that retain water annually from winter and spring precipitation and snowmelt but are dry the rest of the year. Though important habitats and sources of freshwater biodiversity, they are little accounted for in wetland conservation and restoration practices. Like much of the world’s wetlands, they have seen a significant decline from anthropogenic impacts and conversion for alternative land use. Pools are also at significant risk due to the impacts of climate change and invasive species. These small temporary water bodies perform vital ecosystem services and are host to rare and endemic species. Anostraca, or fairy …

Connecting Antibiotic Resistance To The Environment (Care): Introducing A Novel Framework Integrating Chemical Cross-Resistance And Place-Based Engagement To The Blue Marsh Watershed In Reading, Pennsylvania, Jill Felker

Antioch University Dissertations & Theses

Antibiotic resistance is a serious health threat around the world. Millions of individuals are infected with antibiotic-resistant bacteria yearly, and thousands die from previously curable illnesses. Although antibiotic resistance occurs naturally, misuse of antibiotics accelerates the loss of their effectiveness. Public health campaigns focusing on antibiotic awareness have not effectively communicated and educated the public on this health crisis. New efforts to combat antibiotic resistance are urgently needed. This dissertation focuses on the ecological and public health components of antibiotic resistance research that must be addressed to decelerate antibiotic resistance. A new interdisciplinary theoretical framework was developed to Connect Antibiotic …