Digital Commons Network^™

Characterizing Complexes Of Dna And Elastin-Like Polypeptides, Bryce Noe

Undergraduate Research Posters 2018

Elastin-like polypeptides (ELPs) are a class of environmental responsive materials. When prepared with a protein motif that selectively binds to nucleic acids, a nucleic acid-ELP complex can be formed, conferring the responsive properties of ELP onto the nucleic acid. One possible use for such a complex is in DNA origami, where nanoscaled assemblies of DNA can be transformed into nanomachines by using the ELP as an actuator. Other possible uses include the isolation and extraction of a selected strands of genetic material, or the delivery of genetic material to a cell. Using a bacterial expression system, our lab has prepared …

Surface Functionalization Of Pure-Chirality Carbon Nanotubes By Covalent And Noncovalent Chemistry, Fjorela Xhyliu, Niyousha Mohammad Shafie

Undergraduate Research Posters 2018

Single-wall carbon nanotubes (SWCNTs) are one-dimensional cylindrical nanostructures with distinct electronic and optical properties. With all its atoms on the surface, SWCNTs have been widely explored for chemical modification through noncovalent and covalent chemistry, which can provide promising applications in bioimaging and sensing. Here we investigated surface functionalization of purechirality SWCNTs with various glycopolymers, surfactants, and RPMI cell culture media with and without fetal bovine serum (FBS). Raman, vis-NIR absorption, and vis-NIR fluorescence spectra of SWCNTs in various solvent environments were monitored over time. While nanotube aggregation was not observed for incubation in FBS containing RPMI for 8 hours, interactions …

Reverse Insulator Dielectrophoresis: Utilizing Droplet Microenvironments For Discerning Molecular Expressions On Cell Surfaces, Jeana Collins

Dissertations, Master's Theses and Master's Reports

Lab-on-a-chip (LOC) technologies enable the development of portable analysis devices that use small sample and reagent volumes, allow for multiple unit operations, and couple with detectors to achieve high resolution and sensitivity, while having small footprints, low cost, short analysis times, and portability. Droplet microfluidics is a subset of LOCs with the unique benefit of enabling parallel analysis since each droplet can be utilized as an isolated microenvironment. This work explored adaptation of droplet microfluidics into a unique, previously unexplored application where the water/oil interface was harnessed to bend electric field lines within individual droplets for insulator dielectrophoretic (iDEP) characterizations. …

Investigation Of Mechanical, Electrical, And Thermal Properties Of Particulate/Fiber/Polymer Composites, Julie Tomasi

Dissertations, Master's Theses and Master's Reports

Composites have many applications due to their high strength to weight ratio, chemical resistance, and the ability to tune properties like electrical resistivity (ER). In this work, polyetheretherketone (PEEK) and cycloaliphatic epoxy (CE) composites with different fillers were studied. PEEK composites contained up to 10 wt% Akzo Nobel Ketjenblack carbon black (CB), up to 15 wt% Asbury Carbons TC307 graphene nanoplatelets (GNP), up to 30 wt% Solvay carbon fiber (CF), and combinations of the three carbons. Formulations were developed for electrostatic dissipative and electrically conductive applications. The most conductive formulation was 7.5 wt% CB/30 wt% CF/PEEK, which had an electrical …

Molecular Biogeochemistry Of A Poor Fen, Zhimin Song

Dissertations, Master's Theses and Master's Reports

Variations in climate may rapidly change the carbon balance of peatlands and increase greenhouse gas emissions through accelerated decomposition of peat and dissolved organic matter (DOM). In this study, porewater samples were collected monthly from May to October in 2017 to study the effects of plant functional groups (PFGs) on DOM, dissolved inorganic and organic nitrogen through the season in a poor fen with replicate plots dominated by different PFGs in Nestoria, Michigan, USA (46.34˚N 88.16˚W). The composition of the peat porewater showed strong statistical significance with plot type and season.The observed PFG and season impact on the composition of …

Using Agricultural Wastes To Treat Lead-Contaminated Water In Western Australia, Hanie Hashtroudi

Theses: Doctorates and Masters

Aqueous solutions are becoming increasingly contaminated in all parts of the world (2015). Heavy metals are toxic contaminants that are mainly distributed in urban stormwater run-off and industrial wastewaters as a result of some mining operations, electronic assembly planting, battery manufacturing, and etching operations (Kadirvelu et al. 2001). Pb (II) is a heavy metal that causes significant damage in the human body. Drinking lead-contaminated water even at low concentrations may cause lifethreatening conditions such as cancer, kidney damage, brain damage, and liver problems (El-Said 2010). Therefore, it is necessary to remove lead from aqueous solutions.

Several conventional physical, chemical, and …

Development Of Bioreactors For Comparative Study Of Naturalattenuation, Biostimulation, And Bioaugmentation Ofpetroleum-Hydrocarbon Contaminated Soil, Mohammad-Saeed Safdari, Hamid-Reza Kariminia, Mahmood Rahmati, Farhad Fazlollahi, Alexandra Polasko, Shaily Mahendra, W Vincent Wilding, Thomas H. Fletcher

Faculty Publications

Bioremediation of soil and groundwater sites contaminated by petroleum hydrocarbons is known as a technically viable, cost-effective, and environmentally sustainable technology. The purpose of this study is to investigate laboratory-scale bioremediation of petroleum-hydrocarbon contaminated soil through development of eight bioreactors, two bioreactors for each bioremediation mode. The modes were: (1)natural attenuation (NA); (2) biostimulation (BS) with oxygen and nutrients; (3) bioaugmentation (BA)with hydrocarbon degrading isolates; (4) a combination of biostimulation and bioaugmentation (BS-BA). Total petroleum hydrocarbons (TPH) mass balance over the bioreactors showed about 2% of initial20,000 mg kg-soil−1TPH was removed by advection due to synthetic groundwater which was flow-ing …

Formation And Regeneration Of Shape-Selective Zsm-35 Catalysts For N‐Butene Skeletal Isomerization To Isobutene, Quan Xu, Wenjing Yang, Zhiwei Chen, Yingchun Ye, Yan Luo, Jason Street, Hongjun Zhou, Chunming Xu

Faculty & Staff Scholarship

Skeletal isomerization of n-butene to isobutene was performed over formed ZSM-35 zeolites in a lab-scale, fixed-bed reactor. The formation conditions to produce isobutene with zeolites were varied to determine the most advantageous binding agent (pseudo-boehmite) amount and steam dealumination conditions. The optimal binding agent amount was 20 wt %. Steam dealumination stabilized the catalysts and enhanced the catalytic performance because of the stable Si/Al framework and suitable acidity. The optimized process conditions involved a reaction temperature of 410 °C, a weight hourly space velocity of 5 h−1, and an n-butene concentration in feedstock of 50%. After being on-stream for 296 …

Cm-Dii And Mcf-7 Breast Cancer Cell Responses To Chemotherapeutic Agents, Ashten M.C. Anderson

Honors Theses

CM-DiI is a lipophilic, red fluorescent dye used for staining and tracking the migration of cells. CM-DiI makes it possible to visualize cells in histological regions and can therefore be very useful for the tracking of cancer cell proliferation and metastasis in vivo. The ability to track and quantitate cancer cell proliferation in vivo is essential for cancer drug discovery. If CM-DiI labeled cancer cells respond to chemotherapy agents similar to unlabeled cancer cells, it facilitates screening of potential anti-cancer compounds using CM-DiI labeled cells in a xenotransplanted, transgenic zebrafish model (Danio rerio). To investigate whether CM-DiI labeling would affect …

The Development And Optimization Of An Ethylbenzene Process, Aynslie Fritz

Honors Theses

The purpose of this thesis was to optimize a pre-existing vapor phase ethylbenzene process, and to develop a base case liquid phase ethylbenzene process. A brief introduction is included to present an overview of process optimization and suggest common strategies to employ. While optimizing the vapor phase process, discrete optimization was performed to determine the local optima for multiple unit operations by comparing their net present value to that of the base case. After optimization, an $81.5 million increase in net present value was obtained. When developing the liquid phase ethylbenzene process, Antoine's Equation, Raoult's Law, the first law of …

Inhibition Of Blood Coagulation Factor Xii: Evaluation Of Flavonoids As A Drug Candidate, Betsy Crosswhite

Honors Theses

This study investigated natural product inhibitors of blood coagulation Factor XII (FXII). FXII initiates the Kallikrein Kinin-System (KKS) within the intrinsic coagulation pathway. Increased expression of this system leads to proinflammatory and procoagulant activities. Inflammation occurs through downstream activation in the KKS. Following the activation of FXII-dependent pathway, bradykinin (BK) binds to the BK receptor 2 (B2) and produces inflammatory signaling. Abnormally increased BK can result in life threatening Hereditary Angioedema (HAE), characterized by severe reoccurring swelling. FXII is critical for pathogenic thrombosis, but is dispensable for hemostasis. This unique property of FXII makes it an attractive drug target. We …

Effects Of Predation On The Biochemical Constituents Of The Bleached Soft Coral Sinularia Polydactyla, Carley Elizabeth Cole

Honors Theses

Climate change can indirectly affect the level of predation on soft corals. As sea temperatures rise, more and more bleaching events are occurring, which can affect the production of chemical defenses and the concentrations of the biochemical constituents that make up the soft corals. These changes may make the soft corals more attractive to predators. This phenomenon is suggested by the environmental stress theory (EST), which states that under stressful conditions, more of an organism's energy is allocated to survival rather than to other factors, such as reproduction or predator deterrence. To test the effect of predation on already bleached …

Targeting Metastatic Breast Cancer With Statin Drugs And Coq10, Jacob Thrasher

Honors Theses

Statin drugs are commonly prescribed to lower cholesterol levels in patients, but recently statins have been under investigation as a potential anti-cancer drug. Statins are HMG-CoA reductase inhibitors and subsequently inhibit the mevalonate pathway and cholesterol synthesis. Since cholesterol trafficking is vital in the growth and metastasis of cancer, statin drugs are being studied to explore their effects on cancer cells. CoQ10, one of the products from the mevalonate pathway, also has shown some potential anti-cancer properties, but its use to combat cancer is controversial. While some studies have shown that CoQ10 supplements can be synergistic with other cancer treatment …

Process Design And Optimization: Analysis Of An Ethylbenzene Production Plant, Jonathan Butler Vanveckhoven

Honors Theses

This thesis will cover the steps I took to evaluate an ethylbenzene production plant. I, along with my senior design team, was first tasked with optimizing a vapor-phase ethylbenzene production plant based off of a given base case. Our team was able to improve the net present value of the plant from -$4.8 million to $70.4 million through discrete optimization. After the vapor-phase plant was evaluated, I was tasked with creating a base case, liquid-phase ethylbenzene production plant. I explain the theory behind process flow diagram development, then explain how I produced the process flow diagram and stream table for …

Financial Optimization Of An Ethylbenzene Production Process, Philip B. Thomas

Honors Theses

A crucial step in chemical engineering design is process optimization. This paper describes the steps in the design process with special emphasis placed on process optimization and the preceding step, creation of a base case for the process. The paper also describes what is meant by financial optimization in chemical engineering and explains some of its imperfections. An example of financial optimization of a gas-phase ethylbenzene production process is given. The example provides a summary of one cycle of both topological and parametric single variable discrete optimization to find a local optimum. Net present value was used as the objective …

Development Of A Scn1a Null Zebrafish Model For Screening Potential Anti-Epileptic Natural Products, Patricia Ann Lipson

Honors Theses

Epilepsy affects around 50 million people in the world. Thus, it is imperative that new more effective and safe treatments be found. This study was designed to use zebrafish to screen potential anti-epileptic natural products. We utilized two scn1Lab null zebrafish models (morpholino-injected fish where scn1Lab was transiently knocked down and a transgenic scn1Lab -/- fish line). Alternatively, we used AB wildtype fish to test compounds in a chemically-induced seizure model. Natural compounds including cannabidiol, CBD, and Tapinanthus globiferous, TG, extracts were screened for their anti-seizure activity. When scn1Lab -/- fish were treated with CBD (0.075 and 0.3 mg/L) from …

Investigation Of Combustion Characteristics Of A Heavy-Duty Diesel Engine Retrofitted To Natural Gas Spark Ignition Operation, Jinlong Liu

Graduate Theses, Dissertations, and Problem Reports

The conversion of existing diesel engines to natural-gas spark ignition operation by adding a gas injector in the intake manifold for fuel delivery and replacing the diesel fuel injector with a spark plug to initiate and control the combustion process can reduce U.S. dependence on petroleum imports and curtail engine-out emissions. As the conventional diesel combustion chamber (i.e., flat head and bowl-in-piston) creates high turbulence, the engine can operate leaner, which would increase its efficiency and reduce emissions. However, natural gas combustion in such retrofitted engines presents differences compared to that in conventional spark ignited engines. Subsequently, the main goal …

Applications Of Cellular Components In Engineered Environments, Xiao Hu

Graduate Theses, Dissertations, and Problem Reports

Manipulation of cellular components in synthetic environment has attracted interest for applications ranging from sensors to nanelectronics and from catalysis to biomedical devices. In such applications, biological-based processes such as specific recognition and self-assembly direct the formation of hierarchical structures, all at minimum energetic costs, with high efficiency and reliability.

Among such cellular machines, microtubules and kinesins have attracted special interest. Inside the cells, microtubules are giving structural integrity while serving as regular and uniform tracks for transport of vesicles or organelles. Kinesin uses a microtubule track in vivo to progress to specific locations with processive and coordinated steps, all …

Pressure-Driven Stabilization Of Capacitive Deionization, Landon S. Caudill

Theses and Dissertations--Mechanical Engineering

The effects of system pressure on the performance stability of flow-through capacitive deionization (CDI) cells was investigated. Initial data showed that the highly porous carbon electrodes possessed air/oxygen in the micropores, and the increased system pressure boosts the gases solubility in saline solution and carries them out of the cell in the effluent. Upon applying a potential difference to the electrodes, capacitive-based ion adsorption occurs in competition with faradaic reactions that consume oxygen. Through the addition of backpressure, the rate of degradation decreases, allowing the cell to maintain its salt adsorption capacity (SAC) longer. The removal of oxygen from the …

Characterization Of Rotary Bell Atomizers Through Image Analysis Techniques, Jacob E. Wilson

Theses and Dissertations--Mechanical Engineering

Three methods were developed to better understand and characterize the near-field dynamic processes of rotary bell atomization. The methods were developed with the goal of possible integration into industry to identify equipment changes through changes in the primary atomization of the bell. The first technique utilized high-speed imaging to capture qualitative ligament breakup and, in combination with a developed image processing technique and PIV software, was able to gain statistical size and velocity information about both ligaments and droplets in the image data. A second technique, using an Nd:YAG laser with an optical filter, was used to capture size statistics …

NoX Formation In Light-Hydrocarbon, Premixed Flames, Robert T. Hughes

Theses and Dissertations--Mechanical Engineering

This study explores the reactions and related species of NO_x pollutants in methane flames in order to understand their production and consumption during the combustion process. To do this, several analytical simulations were run to explore the behavior of nitrogen species in the pre-flame, post- flame, and reaction layer regions. The results were then analyzed in order to identify all "steady-state" species in the flame as well as the determine all the unnecessary reactions and species that are not required to meet a defined accuracy. The reductions were then applied and proven to be viable.

Surface And Structural Modification Of Carbon Electrodes For Electroanalysis And Electrochemical Conversion, Yan Zhang

Theses and Dissertations--Chemistry

Electrocatalysis is key to both sensitive electrochemical sensing and efficient electrochemical energy conversion. Despite high catalytic activity, traditional metal catalysts have poor stability, low selectivity, and high cost. Metal-free, carbon-based materials are emerging as alternatives to metal-based catalysts because of their attractive features including natural abundance, environmental friendliness, high electrical conductivity, and large surface area. Altering surface functionalities and heteroatom doping are effective ways to promote catalytic performance of carbon-based catalysts. The first chapter of this dissertation focuses on developing electrode modification methods for electrochemical sensing of biomolecules. After electrochemical pretreatment, glassy carbon demonstrates impressive figures-of-merit in detecting small, redox-active …

Toxicological Inhalation Effects Of Metal-Based Nanoparticle Aerosols As Studied By A Portable In Vitro Exposure Cassette, Lynn E. Secondo

Theses and Dissertations

The toxicology of aerosols in occupational settings is often performed through particle collection on a filter followed by reconstitution into cell culture media which can alter the biological effects. Current in vitro exposure systems require additional instruments to control temperature and humidity, making the system bulky and difficult to take to the field. The Portable In Vitro Exposure Cassette (PIVEC) was designed for personal monitoring, characterized using copper nanoparticles, tested with alveolar cells, and set-up for real-time monitoring. Three differently sized copper nanoparticles, 40-800 nm, were dispersed as a dry aerosol and measured gravimetrically and on a number concentration basis …

Process Optimization For The Synthesis Of Gold Nanoparticles From A Mixed Metal Precursor Solution, Kathryn Ann Dill

Theses and Dissertations

Separation methods involving a mixture of metals typically include upfront processing that leads to one final product. To lower the waste and ultimately environmental burden, the potential to synthesize multiple functional products from a mixed metal precursor solution is explored. The initial precursor solutions contained varying ratios of gold and copper, gold and nickel, and finally a ternary solution of gold, copper, and nickel. The amount of gold was kept constant, while the amount of copper and/or nickel was sequentially increased. Two separate synthesis processes were tested, the traditional Turkevich method involving trisodium citrate and another chemical reduction method involving …

Metabolic Engineering Of Serratia Marcescens, Qiang Yan

Theses and Dissertations

The potential value of the chitin biomass (e.g. food waste) is recently considered being ignored by landfill. Chitin can be a potential cheap carbon source for converting into value-added chemicals by microorganisms. Serratia marcescens is a chitinolytic bacterium that harbors endogenous chitinase systems. With goals of characterzing S. marcescens chitinolytic capabilities and applying S. marcescens to chemical production from chitin, my dissertation main content includes five chapters: 1) Chapter 1 highlights background information of chitin source, S. marcescens and potential metabolic engineering targets using chitin as a substrate; 2) Chapter 2 demonstrates that ChiR is a key regulator in regulating …

Reduced Exhaust Emissions Through Blending N-Butanol With Ultra Low Sulfur Diesel And Synthetic Paraffinic Kerosene In Reactivity Controlled Compression Ignition Combustion, Remi Gaubert

Electronic Theses and Dissertations

Increasing restrictions on the emitted exhaust emissions in diesel engines are becoming a more challenging task than in previous years. An electronic common rail fuel injection system and a port fuel injection (PFI) system were developed for an experimental engine to research dual fuel combustion. The experimental research was conducted at 1500 rpm and 4, 5, and 6 bar indicated mean effective pressure (IMEP). n-Butanol was port fuel injected at a 60% by mass fraction coupled with direct injection (DI) of three fuels, including ultra-low sulfur diesel (ULSD RCCI), a 50-50 wt-% blend of ULSD and butanol (ULSD-Bu RCCI), and …