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Full-Text Articles in Biological and Physical Anthropology

From The Human To The Planetary: Speculative Futures Of Care, Miriam Ticktin Oct 2019

From The Human To The Planetary: Speculative Futures Of Care, Miriam Ticktin

Publications and Research

This is largely a theoretical, speculative essay that takes on the question of what ‘care’ looks like at a moment when climate change is increasingly taking center stage in public and political discussions. Starting with two new practices, namely, humanitarian care for nonhumans and One Health collaborations, I seek to determine what forms of political care can incorporate the well-being of future generations and future iterations of the earth. After an exploration of One Health as an approach to planetary care, I ask what its parts enable us to think, despite its limitations; I focus on the new human-nonhuman assemblages …


Successful Enrichment And Recovery Of Whole Mitochondrial Genomes From Ancient Human Dental Calculus, Andrew T. Ozga, Maria A. Nieves-Colon, Tanvi P. Honap, Krithivasan Sankaranarayanan, Courtney A. Hofman, George R. Milner, Cecil M. Lewis Jr., Anne C. Stone, Christina Warinner Aug 2019

Successful Enrichment And Recovery Of Whole Mitochondrial Genomes From Ancient Human Dental Calculus, Andrew T. Ozga, Maria A. Nieves-Colon, Tanvi P. Honap, Krithivasan Sankaranarayanan, Courtney A. Hofman, George R. Milner, Cecil M. Lewis Jr., Anne C. Stone, Christina Warinner

Andrew Ozga

Objectives

Archaeological dental calculus is a rich source of host‐associated biomolecules. Importantly, however, dental calculus is more accurately described as a calcified microbial biofilm than a host tissue. As such, concerns regarding destructive analysis of human remains may not apply as strongly to dental calculus, opening the possibility of obtaining human health and ancestry information from dental calculus in cases where destructive analysis of conventional skeletal remains is not permitted. Here we investigate the preservation of human mitochondrial DNA (mtDNA) in archaeological dental calculus and its potential for full mitochondrial genome (mitogenome) reconstruction in maternal lineage ancestry analysis.

Materials and …


Origins Of An Unmarked Georgia Cemetery Using Ancient Dna Analysis, Andrew T. Ozga, Raul Y. Tito, Brian M. Kemp, Hugh Matternes, Alexandra J. Obregon-Tito, Leslie Neal, Cecil M. Lewis Jr. Aug 2019

Origins Of An Unmarked Georgia Cemetery Using Ancient Dna Analysis, Andrew T. Ozga, Raul Y. Tito, Brian M. Kemp, Hugh Matternes, Alexandra J. Obregon-Tito, Leslie Neal, Cecil M. Lewis Jr.

Andrew Ozga

Determining the origins of those buried within undocumented cemeteries is of incredible importance to historical archaeologists and, in many cases, the nearby communities. In the case of Avondale Burial Place, a cemetery in Bibb County, Georgia, in use from 1820 to 1950, all written documentation of those interred within it has been lost. Osteological and archaeological evidence alone could not describe, with confidence, the ancestral origins of the 101 individuals buried there. In the present study, we used ancient DNA extraction methods in well-preserved skeletal fragments from 20 individuals buried in Avondale Burial Place to investigate the origins of the …


Comparison Of Two Ancient Dna Extraction Protocols For Skeletal Remains From Tropical Environments, Maria A. Nieves-Colon, Andrew T. Ozga, William J. Pestle, Andrea Cucina, Vera Tiesler, Travis W. Stanton, Anne C. Stone Aug 2019

Comparison Of Two Ancient Dna Extraction Protocols For Skeletal Remains From Tropical Environments, Maria A. Nieves-Colon, Andrew T. Ozga, William J. Pestle, Andrea Cucina, Vera Tiesler, Travis W. Stanton, Anne C. Stone

Andrew Ozga

Objectives

The tropics harbor a large part of the world's biodiversity and have a long history of human habitation. However, paleogenomics research in these climates has been constrained so far by poor ancient DNA yields. Here we compare the performance of two DNA extraction methods on ancient samples of teeth and petrous portions excavated from tropical and semi‐tropical sites in Tanzania, Mexico, and Puerto Rico (N = 12).

Materials and Methods

All samples were extracted twice, built into double‐stranded sequencing libraries, and shotgun sequenced on the Illumina HiSeq 2500. The first extraction protocol, Method D, was previously designed for …


Comparison Of Play Frequency In Four Sympatric Monkey Species In Kibale National Park, Uganda, Sara G. Lucci Aug 2019

Comparison Of Play Frequency In Four Sympatric Monkey Species In Kibale National Park, Uganda, Sara G. Lucci

Theses and Dissertations

This study describes play in red colobus (Procolobus rufomitratus), grey-cheeked mangabeys (Lophocebus albigena), black-and-white colobus (Colobus guereza), and redtail monkeys (Cercopithecus ascanius) to test Instinct-Practice Theory. Solitary locomotor play was different among the species. Rough-and-tumble play was different between male and female redtail monkeys. These results partially support Instinct-Practice Theory.


An Early Modern Human Outside Africa, Eric Delson Jul 2019

An Early Modern Human Outside Africa, Eric Delson

Publications and Research

Analysis of two fossils from a Greek cave has shed light on early hominins in Eurasia. One fossil is the earliest known specimen of Homo sapiens found outside Africa; the other is a Neanderthal who lived 40,000 years later.


Probability, Populations, Phylogenetics And Hominin Speciation, Niccolo Caldararo Jul 2019

Probability, Populations, Phylogenetics And Hominin Speciation, Niccolo Caldararo

Human Biology Open Access Pre-Prints

A number of recent articles have appeared on the hominin Denisova fossil remains. Many of them focus on attempts to produce DNA sequences from the extracted samples. Often these project mtDNA sequences from the fossil remains of a number of Neandertal fossils and the Denisovans in an attempt to understand the evolution of Mid Pleistocene human ancestors. These papers, introduce a number of problems in the interpretation of speciation in hominins. One concerns the degradation of the ancient DNA and its interpretation as authentic genetic information. Another concerns the idea of “species” versus that of “population” and the use of …


Microdamage As A Bone Quality Component: Practical Guidelines For The Two‐Dimensional Analysis Of Linear Microcracks In Human Cortical Bone, Victoria M. Dominguez, Amanda M. Agnew May 2019

Microdamage As A Bone Quality Component: Practical Guidelines For The Two‐Dimensional Analysis Of Linear Microcracks In Human Cortical Bone, Victoria M. Dominguez, Amanda M. Agnew

Publications and Research

Microdamage is a component of bone quality believed to play an integral role in bone health. However, comparability between existing studies is fraught with issues due to highly variable methods of sample preparation and poorly defined quantification criteria. To address these issues, this article has two aims. First, detailed methods for preparation and analysis of linear microcracks in human ribs, specifically addressing troubleshooting issues cited in previous studies, are laid out. Second, new, partially validated criteria are proposed in an effort to reduce subjective differences in microcrack counts and measures, ensuring more comparable results between studies. Revised definitions based on …


The Functional Morphology Of Ingestion In The Platyrrhine Sclerocarpic Harvesters (Platyrrhini, Primates), Zachary Stoffel Klukkert May 2019

The Functional Morphology Of Ingestion In The Platyrrhine Sclerocarpic Harvesters (Platyrrhini, Primates), Zachary Stoffel Klukkert

Dissertations, Theses, and Capstone Projects

The identification of anatomical correlates of diet and feeding behavior in nonhuman primates is an important area of research in biological anthropology. The morphology of the jaws and teeth reflects the phylogeny and adaptations that distinguish taxa and their different ecological niches. Studying the form-function relationships of jaws and teeth in modern species provides a framework for interpreting the diets of extinct species and for inferring the ecological pressures that may have contributed to the evolutionary diversification of primate craniodental morphology. Previous work on modeling primate jaw mechanics has focused largely on the functional context of a closed jaw. Little …


Evolution Of Endurance Running Genes Across Primates, Natalia T. Grube Apr 2019

Evolution Of Endurance Running Genes Across Primates, Natalia T. Grube

Theses and Dissertations

The endurance running hypothesis has emerged as a key idea to explain several unique anatomical, physiological, and genetic features of modern humans—among these features is the evolution of ACTN3 (Bramble & Lieberman 2004, Nature), a gene linked to human athletic performance. An additional gene linked to human endurance performance is ACE. Because endurance running is a uniquely human trait, I predicted that ACE and ACTN3 genes would be evolving adaptively in the human lineage when examined in a wider primatological framework. To test this I compiled ACE and ACTN3 genes from 14 primate species and phylogenetically tested if these genes …


Climatic Variables Are Strong Predictors Of Allonursing And Communal Nesting In Primates, Alexandra Louppova Feb 2019

Climatic Variables Are Strong Predictors Of Allonursing And Communal Nesting In Primates, Alexandra Louppova

Theses and Dissertations

Allomaternal care (AMC) is widespread throughout the primate order, previous studies have focused on benefits and costs to individuals. However, our understanding of environmental impacts on AMC behaviors in primates is still limited. Our study examines how ecology and environmental factors can predict certain AMC behaviors more than others.


The Morphology And Evolution Of The Primate Brachial Plexus, Brian M. Shearer Feb 2019

The Morphology And Evolution Of The Primate Brachial Plexus, Brian M. Shearer

Dissertations, Theses, and Capstone Projects

Primate evolutionary history is inexorably linked to the evolution of a broad array of locomotor adaptations that have facilitated the clade’s invasion of new niches. Researchers studying the evolution of primates and of their individual locomotor adaptations have traditionally relied on bony morphology – a practical choice given the virtual non-existence of any other type of tissue in the fossil record. However, this focus downplays the potential importance of the many other structures involved in locomotion, such as muscle, cartilage, and neural tissue, which may each be influenced by separate selective forces because of their different roles in facilitating movement. …


Occam's Razor Vol. 9 - Full (2019) Jan 2019

Occam's Razor Vol. 9 - Full (2019)

Occam's Razor

No abstract provided.


Mobilizing Heads And Hearts For Wildlife Conservation, Valérie A. M. Schoof, Simon L'Allier Jan 2019

Mobilizing Heads And Hearts For Wildlife Conservation, Valérie A. M. Schoof, Simon L'Allier

Animal Sentience

Highlighting the shared evolutionary relationships between humans and animals — and recognizing that all species, including humans, are unique in their own way — may facilitate caring for and conserving animals by tapping into a human emotion: empathy.


Effects Of Habitat Disturbance On The Teeth Of Propithecus Diadema In The Forests Of Tsinjoarivo, Madagascar: Implications For Species Viability And Conservation, Katie Susann Heffernan Jan 2019

Effects Of Habitat Disturbance On The Teeth Of Propithecus Diadema In The Forests Of Tsinjoarivo, Madagascar: Implications For Species Viability And Conservation, Katie Susann Heffernan

Graduate Research Theses & Dissertations

The accelerated transformation of Madagascar’s ecosystems is a direct result of habitat destruction which has devastating consequences for the viability of the island’s animals. This dissertation focuses on the critically endangered diademed sifaka, Propithecus diadema, living in the rainforests of Tsinjoarivo, Madagascar. Tsinjoarivo has been heavily impacted by slash and burn agriculture and transformed into isolated forest fragments. Previous research by Irwin and colleagues has demonstrated that the diet and group dynamics of Propithecus diadema differ between continuous and degraded forests, but whether fragmented landscapes provide tougher foods and lead to behavioral changes through increased tooth wear has not been …


Effect Of Group Size On The Activity Budget Of Two Captive Chimpanzees (Pan Troglodytes), Kaeley Sullins Jan 2019

Effect Of Group Size On The Activity Budget Of Two Captive Chimpanzees (Pan Troglodytes), Kaeley Sullins

All Master's Theses

Captive facilities housing chimpanzees are required to provide adequate care and provisions such as dietary, social, and environmental enrichment to promote the psychological well-being of the apes in their care. Chimpanzees are social creatures and changes in groups as well as relocation to a facility with new social partners, can impact each individual chimpanzee’s welfare. By tracking each chimpanzee’s activity budgets, managers can assess welfare and make improvements or adjustments if necessary. I looked at the activity budgets of two captive chimpanzees after the death of a group member and the two chimpanzees’ subsequent relocation to a novel, more socially …


Evaluations Of Health In Sympatric Free-Ranging Saguinus Imperator And Leontocebus Weddelli Using Neopterin, Urinalysis, And Blood Chemistry Analyses, Alexandra J. Sacco Jan 2019

Evaluations Of Health In Sympatric Free-Ranging Saguinus Imperator And Leontocebus Weddelli Using Neopterin, Urinalysis, And Blood Chemistry Analyses, Alexandra J. Sacco

All Master's Theses

This thesis is composed of one journal-ready article and one chapter that includes a preliminary interpretation of data for later publication. In summary, this thesis proposes the use of three different methods of evaluating the health status of New World Monkeys: urinary neopterin measurement, blood chemistry analyses, and urinalysis. Chapter II addresses the question of whether or not the neopterin molecule, a biomarker for cell-mediated immune system activation, is conserved across primate taxa. To do so, we collected urine samples across three New World Monkey (NWM) families including captive Leontopithecus rosalia and Pithecia pithecia, and wild populations of Leontocebus …


The Effect Of Sound On Captive Chimpanzees (Pan Troglodytes), Grace Coffman Jan 2019

The Effect Of Sound On Captive Chimpanzees (Pan Troglodytes), Grace Coffman

All Master's Theses

Sound exposure can have detrimental physiological and psychological effects on humans, but effects on nonhuman primates are not as well understood. Captive chimpanzees are exposed to markedly different acoustic environments than their wild counterparts. This study assessed the organic soundscape of a chimpanzee sanctuary, the Fauna Foundation, in Carignan, Québec, Canada. Noninvasive, observational data collection assessed for frequency of behavior and correlations between chimpanzee behavioral categories, arousal level, and decibel level. Agonistic behavior occurred more frequently in the highest decibel level category. There was a positive correlation between decibel level and arousal level. These findings suggest the need for increased …