Social and Behavioral Sciences Commons^™

Exploring Germplasm Diversity To Understand The Domestication Process In Cicer Spp. Using Snp And Dart Markers, Manish Roorkiwal, Eric J. Von Wettberg, Hari D. Upadhyaya, Emily Warschefsky, Abhishek Rathore, Rajeev K. Varshney

College of Agriculture and Life Sciences Faculty Publications

To estimate genetic diversity within and between 10 interfertile Cicer species (94 genotypes) from the primary, secondary and tertiary gene pool, we analysed 5,257 DArT markers and 651 KASPar SNP markers. Based on successful allele calling in the tertiary gene pool, 2,763 DArT and 624 SNP markers that are polymorphic between genotypes from the gene pools were analyzed further. STRUCTURE analyses were consistent with 3 cultivated populations, representing kabuli, desi and pea-shaped seed types, with substantial admixture among these groups, while two wild populations were observed using DArT markers. AMOVA was used to partition variance among hierarchical sets of landraces …

Agent-Based Modeling Of Malaria Vectors: The Importance Of Spatial Simulation, Arne Bomblies

College of Engineering and Mathematical Sciences Faculty Publications

Background: The modeling of malaria vector mosquito populations yields great insight into drivers of malaria transmission at the village scale. Simulation of individual mosquitoes as "agents" in a distributed, dynamic model domain may be greatly beneficial for simulation of spatial relationships of vectors and hosts. Methods. In this study, an agent-based model is used to simulate the life cycle and movement of individual malaria vector mosquitoes in a Niger Sahel village, with individual simulated mosquitoes interacting with their physical environment as well as humans. Various processes that are known to be epidemiologically important, such as the dependence of parity on …

Computational Studies Of Multiple-Particle Nonlinear Dynamics In A Spatio-Temporally Periodic Potential, Owen D. Myers, Junru Wu, Jeffrey S. Marshall, Christopher M. Danforth

College of Engineering and Mathematical Sciences Faculty Publications

The spatio-temporally periodic (STP) potential is interesting in Physics due to the intimate coupling between its time and spatial components. In this paper, we begin with a brief discussion of the dynamical behaviors of a single particle in a STP potential and then examine the dynamics of multiple particles interacting in a STP potential via the electric Coulomb potential. For the multiple particles' case, we focus on the occurrence of bifurcations when the amplitude of the STP potential varies. It is found that the particle concentration of the system plays an important role; the type of bifurcations that occur and …

Rewriting The Call To Charity: From Food Shelf Volunteer To Food Justice Advocate, Beth Dixon

Food Systems Summit 2014

Consider the food shelf volunteer (or any charity worker) who is inspired to practice good work on behalf of those who are poor and hungry. Her beneficence is praiseworthy. But a simple call to charity may also blind the volunteer to certain facts about food justice. First, it leaves out why clients who utilize the food shelf are hungry. Second, it suggests that the generous volunteers who staff the food shelf have met their political responsibilities. In this viewpoint I argue that hunger relief advocates may be transformed into policy advocates only if they are epistemically positioned to do so. …

Racism And Capitalism: Dual Challenges For The Food Movement, Eric Holt-Giménez

Food Systems Summit 2014

No abstract provided.

Developing An Agenda For Research About Policies To Improve Access To Healthy Foods In Rural Communities: A Concept Mapping Study, Donna B. Johnson, Emilee Quinn, Marilyn Sitaker, Alice Ammerman, Carmen Byker, Wesley Dean, Sheila Fleischhacker, Jane Kolodinsky, Courtney Pinard, Stephanie B.Jilcott Pitts, Joseph Sharkey

College of Agriculture and Life Sciences Faculty Publications

Background: Policies that improve access to healthy, affordable foods may improve population health and reduce health disparities. In the United States most food access policy research focuses on urban communities even though residents of rural communities face disproportionately higher risk for nutrition-related chronic diseases compared to residents of urban communities. The purpose of this study was to (1) identify the factors associated with access to healthy, affordable food in rural communities in the United States; and (2) prioritize a meaningful and feasible rural food policy research agenda. Methods. This study was conducted by the Rural Food Access Workgroup (RFAWG), a …

New Perspectives In Ecosystem Services Science As Instruments To Understand Environmental Securities, Ferdinando Villa, Brian Voigt, Jon D. Erickson

Rubenstein School of Environment and Natural Resources Faculty Publications

As societal demand for food, water and other life-sustaining resources grows, the science of ecosystem services (ES) is seen as a promising tool to improve our understanding, and ultimately the management, of increasingly uncertain supplies of critical goods provided or supported by natural ecosystems. This promise, however, is tempered by a relatively primitive understanding of the complex systems supporting ES, which as a result are often quantified as static resources rather than as the dynamic expression of human-natural systems. This article attempts to pinpoint the minimum level of detail that ES science needs to achieve in order to usefully inform …

A Methodology For Adaptable And Robust Ecosystem Services Assessment, Ferdinando Villa, Kenneth J. Bagstad, Brian Voigt, Gary W. Johnson, Rosimeiry Portela, Miroslav Honzák, David Batker

Rubenstein School of Environment and Natural Resources Faculty Publications

Ecosystem Services (ES) are an established conceptual framework for attributing value to the benefits that nature provides to humans. As the promise of robust ES-driven management is put to the test, shortcomings in our ability to accurately measure, map, and value ES have surfaced. On the research side, mainstream methods for ES assessment still fall short of addressing the complex, multi-scale biophysical and socioeconomic dynamics inherent in ES provision, flow, and use. On the practitioner side, application of methods remains onerous due to data and model parameterization requirements. Further, it is increasingly clear that the dominant "one model fits all" …

Genetic Diversity And Demographic History Of Cajanus Spp. Illustrated From Genome-Wide Snps, Rachit K. Saxena, Eric Von Wettberg, Hari D. Upadhyaya, Vanessa Sanchez, Serah Songok, Kulbhushan Saxena, Paul Kimurto, Rajeev K. Varshney

College of Agriculture and Life Sciences Faculty Publications

Understanding genetic structure of Cajanus spp. is essential for achieving genetic improvement by quantitative trait loci (QTL) mapping or association studies and use of selected markers through genomic assisted breeding and genomic selection. After developing a comprehensive set of 1,616 single nucleotide polymorphism (SNPs) and their conversion into cost effective KASPar assays for pigeonpea (Cajanus cajan), we studied levels of genetic variability both within and between diverse set of Cajanus lines including 56 breeding lines, 21 landraces and 107 accessions from 18 wild species. These results revealed a high frequency of polymorphic SNPs and relatively high level of cross-species transferability. …

Crowdsourcing Novel Childhood Predictors Of Adult Obesity, Kirsten E. Bevelander, Kirsikka Kaipainen, Robert Swain, Simone Dohle, Josh C. Bongard, Paul D.H. Hines, Brian Wansink

College of Engineering and Mathematical Sciences Faculty Publications

Effective and simple screening tools are needed to detect behaviors that are established early in life and have a significant influence on weight gain later in life. Crowdsourcing could be a novel and potentially useful tool to assess childhood predictors of adult obesity. This exploratory study examined whether crowdsourcing could generate well-documented predictors in obesity research and, moreover, whether new directions for future research could be uncovered. Participants were recruited through social media to a question-generation website, on which they answered questions and were able to pose new questions that they thought could predict obesity. During the two weeks of …

The Forest Has A Story: Cultural Ecosystem Services In Kona, Hawai‘I, Rachelle K. Gould, Nicole M. Ardoin, Ulalia Woodside, Terre Satterfield, Neil Hannahs, Gretchen C. Daily

Rubenstein School of Environment and Natural Resources Faculty Publications

Understanding cultural dimensions of human/environment relationships is now widely seen as key to effective management, yet characterizing these dimensions remains a challenge. We report on an approach for considering the nonmaterial values associated with ecosystems, i.e., cultural ecosystem services. We applied the approach in Kona, Hawai‘i, using 30 semistructured interviews and 205 in-person surveys, striving to balance pragmatism and depth. We found spirituality, heritage, and identity-related values to be particularly salient, with expression of some of these values varying among respondents by ethnicity and duration of residence in Hawai‘i. Although people of various backgrounds reported strong spirituality and heritage-related values, …

Whales As Marine Ecosystem Engineers, Joe Roman, James A. Estes, Lyne Morissette, Craig Smith, Daniel Costa, James Mccarthy, J. B. Nation, Stephen Nicol, Andrew Pershing, Victor Smetacek

Rubenstein School of Environment and Natural Resources Faculty Publications

Baleen and sperm whales, known collectively as the great whales, include the largest animals in the history of life on Earth. With high metabolic demands and large populations, whales probably had a strong influence on marine ecosystems before the advent of industrial whaling: as consumers of fish and invertebrates; as prey to other large-bodied predators; as reservoirs of and vertical and horizontal vectors for nutrients; and as detrital sources of energy and habitat in the deep sea. The decline in great whale numbers, estimated to be at least 66% and perhaps as high as 90%, has likely altered the structure …

Impacts Of Projected Climate Change Over The Lake Champlain Basin In Vermont, Justin Guilbert, Brian Beckage, Jonathan M. Winter, Radley M. Horton, Timothy Perkins, Arne Bomblies

College of Agriculture and Life Sciences Faculty Publications

The Lake Champlain basin is a critical ecological and socioeconomic resource of the northeastern United States and southern Quebec, Canada. While general circulation models (GCMs) provide an overview of climate change in the region, they lack the spatial and temporal resolution necessary to fully anticipate the effects of rising global temperatures associated with increasing greenhouse gas concentrations. Observed trends in precipitation and temperature were assessed across the Lake Champlain basin to bridge the gap between global climate change and local impacts. Future shifts in precipitation and temperature were evaluated as well as derived indices, including maple syrup production, days above …

Exploring Relationships Between Building And Transportation Energy Use Of Residents In U.S. Metropolitan Regions, Timothy Pede

Graduate College Dissertations and Theses

There is much potential to decrease energy consumption in the U.S. by encouraging compact, centralized development. Although many studies have examined the extent to which built environment and demographic factors are related to household energy use, few have considered both building and transportation energy together. We hypothesized that residents living further from city centers, or urban cores, consume more energy for both purposes than their inner city counterparts, resulting in a direct relationship between building and transportation energy usage. This hypothesis was tested with two case studies.

The first focused on New York City. Annual building energy per unit of …

Shade Coffee: Update On A Disappearing Refuge For Biodiversity, Shalene Jha, Christopher M. Bacon, Stacy M. Philpott, V. Ernesto Méndez, Peter Läderach, Robert A. Rice

College of Agriculture and Life Sciences Faculty Publications

In the past three decades, coffee cultivation has gained widespread attention for its crucial role in supporting local and global biodiversity. In this synthetic Overview, we present newly gathered data that summarize how global patterns in coffee distribution and shade vegetation have changed and discuss implications for biodiversity, ecosystem services, and livelihoods. Although overall cultivated coffee area has decreased by 8% since 1990, coffee production and agricultural intensification have increased in many places and shifted globally, with production expanding in Asia while contracting in Africa. Ecosystem services such as pollination, pest control, climate regulation, and nutrient sequestration are generally greater …

Extension 3.0: Managing Agricultural Knowledge Systems In The Network Age, Mark Lubell, Meredith T. Niles, Matthew Hoffman

College of Agriculture and Life Sciences Faculty Publications

This paper develops the idea of “Extension 3.0” as an approach to agricultural extension that capitalizes on the network structure of local agricultural knowledge systems. Over the last century, agricultural knowledge systems have evolved into networks of widely distributed actors with a diversity of specializations and expertise. Agricultural extension programs need to manage these networks in ways that maximize the synergy between experiential, technical, and social learning. Using empirical research from California farmers, we highlight the structure of these networks within and across contexts, and the importance of boundary-spanning relationships. We provide some initial recommendations about actions needed to realize …

More Cells, Bigger Cells Or Simply Reorganization? Alternative Mechanisms Leading To Changed Internode Architecture Under Contrasting Stress Regimes, Heidrun Huber, Jan De Brouwer, Eric J. Von Wettberg, Heinjo J. During, Niels P.R. Anten

College of Agriculture and Life Sciences Faculty Publications

Summary: Shading and mechanical stress (MS) modulate plant architecture by inducing different developmental pathways. Shading results in increased stem elongation, often reducing whole-plant mechanical stability, while MS inhibits elongation, with a concomitant increase in stability. Here, we examined how these organ-level responses are related to patterns and processes at the cellular level by exposing Impatiens capensis to shading and MS. Shading led to the production of narrower cells along the vertical axis. By contrast, MS led to the production of fewer, smaller and broader cells. These responses to treatments were largely in line with genetic differences found among plants from …

Diversification Activities Of Vermont Dairy Farmers: A Study Of Raw Milk And Local Beef Processing In The State., Ryan Leamy

Graduate College Dissertations and Theses

The vast majority of earned agricultural dollars in Vermont come from the dairy industry, but with volatility in the market in recent years, including rising costs of feed and the fluctuating price of milk, state officials have begun to recommend diversification of farm activities to instill resiliency into the system. The research presented in this thesis explores two avenues for diversification, farm-to-consumer sales of raw milk and local beef production.

The second chapter utilizes diffusion theory to understand the prevalence of raw milk consumption in Vermont, develop a profile of the raw milk consumer, document the motivations of raw milk …

Makers And Mongers: Exploring Social Networks Of Vermont Artisan Cheese, Rachel Anne Distefano

Graduate College Dissertations and Theses

Vermont is widely-regarded as a hub for artisan cheese production, with more cheesemakers per capita than any other US state. Despite significant local and statewide support, out-of-state markets are essential to the long-term success of these small-scale producers. In spatially extended supply chains, retailers occupy a pivotal position. This thesis aims to examine the intermediary role of retailers in building social networks between producers and consumers. Consumers appreciate Vermont artisan cheese, in part, because it is embedded in a complex network of social values and relations related to where and how it is produced. Guided by social theories of consumption, …

Food Sovereignty: An Alternative Paradigm For Poverty Reduction And Biodiversity Conservation In Latin America, M. Jahi Chappell, Hannah Wittman, Christopher M. Bacon, Bruce G. Ferguson, Luis García Barrios, Raúl García Barrios, Daniel Jaffee, Jefferson Lima, V. Ernesto Méndez, Helda Morales, Lorena Soto-Pinto, John Vandermeer, Ivette Perfecto

College of Agriculture and Life Sciences Faculty Publications

Strong feedback between global biodiversity loss and persistent, extreme rural poverty are major challenges in the face of concurrent food, energy, and environmental crises. This paper examines the role of industrial agricultural intensification and market integration as exogenous socio-ecological drivers of biodiversity loss and poverty traps in Latin America. We then analyze the potential of a food sovereignty framework, based on protecting the viability of a diverse agroecological matrix while supporting rural livelihoods and global food production. We review several successful examples of this approach, including ecological land reform in Brazil, agroforestry, milpa, and the uses of wild varieties in …

Coupling Self-Organizing Maps With A Naïve Bayesian Classifier: Stream Classification Studies Using Multiple Assessment Data, Nikolaos Fytilis, Donna M. Rizzo

College of Engineering and Mathematical Sciences Faculty Publications

Organizing or clustering data into natural groups is one of the most fundamental aspects of understanding and mining information. The recent explosion in sensor networks and data storage associated with hydrological monitoring has created a huge potential for automating data analysis and classification of large, high-dimensional data sets. In this work, we develop a new classification tool that couples a Naïve Bayesian classifier with a neural network clustering algorithm (i.e., Kohonen Self-Organizing Map (SOM)). The combined Bayesian-SOM algorithm reduces classification error by leveraging the Bayesian's ability to accommodate parameter uncertainty with the SOM's ability to reduce high-dimensional data to lower …

Happiness And The Patterns Of Life: A Study Of Geolocated Tweets, Morgan R. Frank, Lewis Mitchell, Peter Sheridan Dodds, Christopher M. Danforth

College of Engineering and Mathematical Sciences Faculty Publications

The patterns of life exhibited by large populations have been described and modeled both as a basic science exercise and for a range of applied goals such as reducing automotive congestion, improving disaster response, and even predicting the location of individuals. However, these studies have had limited access to conversation content, rendering changes in expression as a function of movement invisible. In addition, they typically use the communication between a mobile phone and its nearest antenna tower to infer position, limiting the spatial resolution of the data to the geographical region serviced by each cellphone tower. We use a collection …

Parental Environments And Interactions With Conspecifics Alter Salinity Tolerance Of Offspring In The Annual Medicago Truncatula, Brenna M. Castro, Ken S. Moriuchi, Maren L. Friesen, Mounawer Badri, Sergey V. Nuzhdin, Sharon Y. Strauss, Douglas R. Cook, Eric Von Wettberg

College of Agriculture and Life Sciences Faculty Publications

Summary: Based on expectations of the stress-gradient hypothesis for conspecific interactions, stress-sensitive genotypes may be able to persist in stressful environments when positive interactions between individuals occur under stressful environments. Additionally, we test how parental environmental effects alter responses to stress and outcomes of conspecific interactions in stress. While the stress-gradient hypothesis focuses on plant growth, earlier flowering may provide stress avoidance in short-lived organisms. We studied responses to soil salinity and conspecific neighbour using genotypes of Medicago truncatula (Fabaceae) originating from saline or non-saline environments, utilizing seeds from parental plants grown in saline or non-saline environments. During the early …

Beyond Climate-Smart Agriculture: Toward Safe Operating Spaces For Global Food Systems, Henry Neufeldt, Molly Jahn, Bruce M. Campbell, John R. Beddington, Fabrice Declerck, Alessandro De Pinto, Jay Gulledge, Jonathan Hellin, Mario Herrero, Andy Jarvis, David Lezaks, Holger Meinke, Todd Rosenstock, Mary Scholes, Robert Scholes, Sonja Vermeulen, Eva Wollenberg, Robert Zougmoré

Rubenstein School of Environment and Natural Resources Faculty Publications

Agriculture is considered to be "climate-smart" when it contributes to increasing food security, adaptation and mitigation in a sustainable way. This new concept now dominates current discussions in agricultural development because of its capacity to unite the agendas of the agriculture, development and climate change communities under one brand. In this opinion piece authored by scientists from a variety of international agricultural and climate research communities, we argue that the concept needs to be evaluated critically because the relationship between the three dimensions is poorly understood, such that practically any improved agricultural practice can be considered climate-smart. This lack of …

Dynamical Influence Processes On Networks: General Theory And Applications To Social Contagion, Kameron Decker Harris, Christopher M. Danforth, Peter Sheridan Dodds

College of Engineering and Mathematical Sciences Faculty Publications

We study binary state dynamics on a network where each node acts in response to the average state of its neighborhood. By allowing varying amounts of stochasticity in both the network and node responses, we find different outcomes in random and deterministic versions of the model. In the limit of a large, dense network, however, we show that these dynamics coincide. We construct a general mean-field theory for random networks and show this predicts that the dynamics on the network is a smoothed version of the average response function dynamics. Thus, the behavior of the system can range from steady …

Linking Environmental Variability To Village-Scale Malaria Transmission Using A Simple Immunity Model, Teresa K. Yamana, Arne Bomblies, Ibrahim M. Laminou, Jean Bernard Duchemin, Elfatih A.B. Eltahir

College of Engineering and Mathematical Sciences Faculty Publications

Background: Individuals continuously exposed to malaria gradually acquire immunity that protects from severe disease and high levels of parasitization. Acquired immunity has been incorporated into numerous models of malaria transmission of varying levels of complexity (e.g. Bull World Health Organ 50:347, 1974; Am J Trop Med Hyg 75:19, 2006; Math Biosci 90:385-396, 1988). Most such models require prescribing inputs of mosquito biting rates or other entomological or epidemiological information. Here, we present a model with a novel structure that uses environmental controls of mosquito population dynamics to simulate the mosquito biting rates, malaria prevalence as well as variability in protective …

It Is Not How Far You Go, It Is Whether You Can Get There: Modeling The Effects Of Mobility On Quality Of Life In Rural New England, Jane M. Kolodinsky, Thomas Patrick Desisto, David Propen, Matthew E. Putnam, Erin Roche, William R. Sawyer

College of Agriculture and Life Sciences Faculty Publications

Many northern rural areas in the United States present particular challenges to providing year-round transportation options for residents. Climate and the distribution of population and amenities present challenges to developing rural mobility systems that may result in a higher quality of life. Using structural equation modeling and a 2009 survey of residents of Vermont, Maine, and New Hampshire, this study estimated how the availability of built amenities, natural amenities, weather and attitudes toward travel explain actual and unserved travel demand and subsequently quality of life. The presence of unserved travel demand significantly decreased quality of life, while the predicted number …

Payments For Ecosystem Services And The Fatal Attraction Of Win-Win Solutions, R. Muradian, M. Arsel, L. Pellegrini, F. Adaman, B. Aguilar, B. Agarwal, E. Corbera, D. Ezzine De Blas, J. Farley, G. Froger, E. Garcia-Frapolli, E. Gómez-Baggethun, J. Gowdy

College of Agriculture and Life Sciences Faculty Publications

In this commentary we critically discuss the suitability of payments for ecosystem services and the most important challenges they face. While such instruments can play a role in improving environmental governance, we argue that over-reliance on payments as win-win solutions might lead to ineffective outcomes, similar to earlier experience with integrated conservation and development projects. Our objective is to raise awareness, particularly among policy makers and practitioners, about the limitations of such instruments and to encourage a dialogue about the policy contexts in which they might be appropriate. © 2013 Wiley Periodicals, Inc.

The Geography Of Happiness: Connecting Twitter Sentiment And Expression, Demographics, And Objective Characteristics Of Place, Lewis Mitchell, Morgan R. Frank, Kameron Decker Harris, Peter Sheridan Dodds, Christopher M. Danforth

College of Engineering and Mathematical Sciences Faculty Publications

We conduct a detailed investigation of correlations between real-time expressions of individuals made across the United States and a wide range of emotional, geographic, demographic, and health characteristics. We do so by combining (1) a massive, geo-tagged data set comprising over 80 million words generated in 2011 on the social network service Twitter and (2) annually-surveyed characteristics of all 50 states and close to 400 urban populations. Among many results, we generate taxonomies of states and cities based on their similarities in word use; estimate the happiness levels of states and cities; correlate highly-resolved demographic characteristics with happiness levels; and …

Limited Imitation Contagion On Random Networks: Chaos, Universality, And Unpredictability, Peter Sheridan Dodds, Kameron Decker Harris, Christopher M. Danforth

College of Engineering and Mathematical Sciences Faculty Publications

We study a family of binary state, socially inspired contagion models which incorporate imitation limited by an aversion to complete conformity. We uncover rich behavior in our models whether operating with either probabilistic or deterministic individual response functions on both dynamic and fixed random networks. In particular, we find significant variation in the limiting behavior of a population's infected fraction, ranging from steady state to chaotic. We show that period doubling arises as we increase the average node degree, and that the universality class of this well-known route to chaos depends on the interaction structure of random networks rather than …