Physics Commons^™

Identification Of Clay Minerals Of The Eastern Southern Region Of Lake Victoria By Ethylene Glycol And Heat: X-Ray Diffraction And Infrared Spectroscopy Studies, E. H. J. Lugwisha

Tanzania Journal of Science

The effect of glycol and heat on some clay minerals of the eastern southern region of Lake Victoria in Tanzania has been studied. First, Whole Rock Powder mount XRD analysis was carried out at the measuring range 2 # ranging between 2o – 65o. Four non-clay minerals found in samples were Na-feldspar, K-feldspar, pyrope and quartz. Oriented clay mineral XRD analysis diffractograms were developed when the air-dried samples were diffracted in measuring range 2# between 2oo – 32o. Main clay mineral groups found in the samples were kaolinite, illite and montmorillonite. After glycolating the samples, it was evident that kaolinite …

Implementation Of A Tabu Search Heuristic For The Examinations Timetabling Problem, A. R. Mushi

Tanzania Journal of Science

This paper reports on the design and implementation of an algorithm for the construction of an examinations timetable. The Examinations Timetabling Problem is the problem of assigning examinations and candidates to time periods and examination rooms while satisfying a set of specific constraints. Every University has a different set of constraints and structure of examinations. Generally, timetabling problems are NP-Hard and therefore very difficult to solve. However, they are of great interest due to their important practical application in educational institutions. This paper discusses a heuristic algorithm basing on the examinations timetabling at the University of Dar es salaam. The …

The Hubble Space Telescope * Cluster Supernova Survey. Ii. The Type Ia Supernova Rate In High-Redshift Galaxy Clusters, K Barbary, G Aldering, R Amanullah, M Brodwin, N Connolly, Ks Dawson, M Doi, P Eisenhardt, L Faccioli, V Fadeyev, Hk Fakhouri, As Fruchter, D G. Gilbank, Md Gladders, G Goldhaber, A Goobar, T Hattori, E Hsiao, Xiaosheng Huang, Y Ihara, K Kashikawa, B Koester, K Konishi, M Kowalski, C Lidman, L Lubin, J Meyers, T Morokuma, T Oda, N Panagia, S Perlmutter, M Postman, P Ripoche, P Rosati, D Rubin, Dj Schlegel, Al Spadafora, Sa Stanford, M Strovink, N Suzuki, N Takanashi, K Tokita, N Yasuda

Physics and Astronomy

We report a measurement of the Type Ia supernova (SN Ia) rate in galaxy clusters at 0.9 < z < 1.46 from the Hubble Space Telescope Cluster Supernova Survey. This is the first cluster SN Ia rate measurement with detected z > 0.9 SNe. Finding 8 ± 1 cluster SNe Ia, we determine an SN Ia rate of 0.50+0.23 –0.19 (stat) +0.10 –0.09 (sys) h 2 70 SNuB (SNuB ≡ 10–12 SNe L –1 ☉, B yr–1). In units of stellar mass, this translates to 0.36+0.16 –0.13 (stat) +0.07 –0.06 (sys) h 2 70 SNuM (SNuM ≡ 10–12 SNe M –1 ☉ yr–1). This represents a …

Superhalogen Properties Of Cumcln Clusters: Theory And Experiment, Y. J. Ko, H. Wang, K. Pradhan, P. Koirala, Anil K. Kandalam, K. H. Bowen, P. Jena

Physics & Engineering Faculty Publications

No abstract provided.

Entangled-Photon Compressive Ghost Imaging, Petros Zerom, Kam Wai Clifford Chan, John C. Howell, Robert W. Boyd

Mathematics, Physics, and Computer Science Faculty Articles and Research

We have experimentally demonstrated high-resolution compressive ghost imaging at the single-photon level using entangled photons produced by a spontaneous parametric down-conversion source and using single-pixel detectors. For a given mean-squared error, the number of photons needed to reconstruct a two-dimensional image is found to be much smaller than that in quantum ghost imaging experiments employing a raster scan. This procedure not only shortens the data acquisition time, but also suggests a more economical use of photons for low-light-level and quantum image formation.

A Cultured Greigite-Producing Magnetotactic Bacterium In A Novel Group Of Sulfate-Reducing Bacteria, Christopher T. Lefèvre, Nicholas Menguy, Fernanda Abreu, Ulysses Lins, Mihály Pósfai, Tanya Prozorov, David Pignol, Richard B. Frankel, Dennis A. Bazylinski

Physics

Magnetotactic bacteria contain magnetosomes—intracellular, membrane-bounded, magnetic nanocrystals of magnetite (Fe₃O₄) or greigite (Fe₃S₄)—that cause the bacteria to swim along geomagnetic field lines. We isolated a greigite-producing magnetotactic bacterium from a brackish spring in Death Valley National Park, California, USA, strain BW-1, that is able to biomineralize greigite and magnetite depending on culture conditions. A phylogenetic comparison of BW-1 and similar uncultured greigite- and/or magnetite-producing magnetotactic bacteria from freshwater to hypersaline habitats shows that these organisms represent a previously unknown group of sulfate-reducing bacteria in the Deltaproteobacteria. Genomic analysis of BW-1 reveals …

Magnetic And Electronic Properties Of Thin (Ga,Mn)N Films Due To An Embedded Mn-Delta-Doping Layer, H. C. Jeon, S. J. Lee, Tae Won Kang, K. J. Chang, Yung Kee Yeo, T. F. George

Faculty Publications

The magnetization curve as a function of the magnetic field at 5 K showed that the magnetization in the (Ga_0.995Mn_0.005)N thin film was significantly enhanced due to Mn delta-doping. The magnetization curve as a function of the temperature showed that the Curie temperature of the Mn delta-doped (Ga_0.995Mn_0.005)N thin film was estimated to be above room temperature. The theoretical results showed that Ga vacancies near the Mn delta-doping layer were likely to cause p-type conductance in the (Ga_0.995Mn_0.005)N thin film. Abstract © 2011 AIP

Internal Electric Fields Due To Piezoelectric And Spontaneous Polarizations In Cdzno/Mgzno Quantum Well, H. C. Jeon, S. J. Lee, Tae Won Kang, S. H. Park, Yung Kee Yeo, T. F. George

Faculty Publications

We have investigated optical properties as a function of internal and external fields in the quantum well (QW). Optical properties of CdZnO/MgZnO QW structures are investigated by using many‐body effects. The CdZnO/MgZnO QW structure with high Cd composition is found to have smaller optical gain because the strain‐induced piezoelectric polarization and the spontaneous polarization in the well increase with the inclusion of Cd. These results demonstrate that high performance laser diode operation can be realized in CdZnO/MgZnO QW structures by reducing those polarizations adopting dipole reverse method.

Are Three Flavors Special?, Joseph Schechter, Amir H. Fariborz, Renata Jora, M. Naeem Shahid

Physics - All Scholarship

It has become clearer recently that the regular pattern of three flavor nonets describing the low spin meson multiplets seems to require some modification for the case of the spin 0 scalar mesons. One picture which has had some success, treats the scalars in a chiral Lagrangian framework and considers them to populate two nonets. These are, in turn, taken to result from the mixing of two "bare" nonets, one of which is of quark- antiquark type and the other of two quark- two antiquark type. Here we show that such a mixing is, before chiral symmetry breaking terms are …

Electroluminescence Studies On Longwavelength Indium Arsenide Quantum Dot Microcavities Grown On Gallium Arsenide, John C. Ramsey

Theses and Dissertations

A comprehensive study of the electroluminescence of four GaAs/AlGaAs microcavity devices with InAs/GaInAs quantum dot active regions emitting near 1.3 µm was conducted. The four molecular beam epitaxial grown samples with AlAs oxide aperture confinement layers were fabricated, characterized, and optically modeled. Optical power transmission of the samples was modeled using Matlab and compared with measured transmission data. Resonant cavity light emitting diodes (RCLEDs) and three vertical cavity surface emitting laser (VCSEL) samples were fabricated and electro-optically characterized over a range of injection currents and temperatures. Devices achieved continuous wave room temperature lasing at 1.28 µm with an output power …

Kinetics Of The Electrical Discharge Pumped Oxygen-Iodine Laser, Matthew A. Lange

Theses and Dissertations

A systematic study of microwave discharges at 2.45 GHz has been performed through the pressure range of sustainable electric discharges in pure oxygen flows of 2 to 10 Torr. A corresponding study of 13.56 MHz has also been performed at pressures of 2, 4, and 7 Torr. Optical emissions from O2(a 1Δ), O2(b 1Σ), and O-atoms have been measured from the center of a μ-wave discharge. Discharge residence times from 0.1 to 5 ms have been reported. The O2(b 1Σ) emissions, with a spectral resolution of 0.01 nm, have been used to measure the temperature of the gas, which typically …

Formation Of Organized Nanostructures From Unstable Bilayers Of Thin Metallic Liquids, Mikhail Khenner, Sagar Yadavali, Ramki Kalyanaraman

Mathematics Faculty Publications

Dewetting of pulsed-laser irradiated, thin (< 20 nm), optically reflective metallic bilayers on an optically transparent substrate with a reflective support layer is studied within the lubrication equations model. A steady-state bilayer film thickness (h) dependent temperature profile is derived based on the mean substrate temperature estimated from the elaborate thermal model of transient heating and melting/freezing. Large thermocapillary forces are observed along the plane of the liquid-liquid and liquid-gas interfaces due to this h-dependent temperature, which, in turn, is strongly influenced by the h-dependent laser light reflection and absorption. Consequently the dewetting is a result of the competition between thermocapillary and intermolecular forces. A linear analysis of the dewetting length scales established that the non-isothermal calculations better predict the experimental results as compared to the isothermal case within the bounding Hamaker coefficients. Subsequently, a computational non-linear dynamics study of the dewetting pathway was performed for Ag/Co and Co/Ag bilayer systems to predict the morphology evolution. We found that the systems evolve towards formation of different morphologies, including core-shell, embedded, or stacked nanostructure morphologies.

Ordered Phases In Ruthenium Binary Alloys From High-Throughput First-Principles Calculations, Gus L. W. Hart, Lance J. Nelson, Michal Jahnátek, Ohad Levy, Roman V. Chepulskii, J. Xue, Stephano Curtarolo

Faculty Publications

Despite the increasing importance of ruthenium in numerous technological applications, e.g., catalysis and electronic devices, experimental and computational data on its binary alloys are sparse. In particular, data are scant on those binary systems believed to be phase-separating. We performed a comprehensive study of ruthenium binary systems with the 28 transition metals, using high-throughput first-principles calculations. These computations predict novel unsuspected compounds in 7 of the 16 binary systems previously believed to be phase-separating and in two of the three systems reported with only a high-temperature σ phase. They also predict a few unreported compounds in five additional systems and …

Statistical Spectral Parameter Estimation Of Acoustic Signals With Applications To Byzantine Music, Kyriakos Michael Tsiappoutas

LSU New Orleans Theses and Dissertations

Digitized acoustical signals of Byzantine music performed by Iakovos Nafpliotis are used to extract the fundamental frequency of each note of the diatonic scale. These empirical results are then contrasted to the theoretical suggestions and previous empirical findings. Several parametric and non-parametric spectral parameter estimation methods are implemented. These include: (1) Phase vocoder method, (2) McAulay-Quatieri method, (3) Levinson-Durbin algorithm,(4) YIN, (5) Quinn & Fernandes Estimator, (6) Pisarenko Frequency Estimator, (7) MUltiple SIgnal Characterization (MUSIC) algorithm, (8) Periodogram method, (9) Quinn & Fernandes Filtered Periodogram, (10) Rife & Vincent Estimator, and (11) the Fourier transform. Algorithm performance was very precise. …

Multimessenger Astronomy: Modeling Gravitational And Electromagnetic Radiation From A Stellar Binary System, Kevin Kern

Honors Theses

Our Solar System is one of roughly 100 billion other stars that make up the Milky Way Galaxy. Two-thirds of all stars are paired off, forming a gravitational bond between one another. Such systems are known as stellar binaries. Although these binaries are prevalent there is much yet to be learned about their formation, evolution, and interactions. The approach taken in this thesis is to produce simulated data representing the expected measurements that an observational astronomer would collect. Specifically, we have simulated the data from an eclipsing binary light curve, spectroscopic velocity curve, and the gravitational wave times series form …

Photocatalytic Activity Of Zinc Oxide Thin Films Prepared By Dc Sputter Deposition And Thermal Oxidation, Robert Louder

Honors Theses

Zinc oxide (ZnO) is a wide-bandgap semiconductor with a broad range of applications, such as photocatalysis. The photocatalytic properties of ZnO result from the highly oxidizing holes and reducing electrons that are induced on the ZnO surface by ultraviolet (UV) light. The efficiency of electron-hole pair formation is therefore critical for photocatalysis, and thus the optical quality of the films in the UV region is of critical importance. ZnO thin films have been fabricated using DC sputter deposition of Zn-metal films followed by thermal oxidation at different temperatures (300, 600, and 900°C). Characterization of the optical properties of the resulting …

Development Of A Strontium-87 Ion Interferometer, Christopher Joseph Erickson

Theses and Dissertations

I present the construction of a low-velocity intense source (LVIS) of laser-cooled neutral strontium using permanent ring magnets. The LVIS consists of a magneto-optical trap from which cold strontium is extracted in a well-collimated beam. I also present the development and implementation of a full suite of low-noise, high-bandwidth laser control electronics including a microcontroller unit. This microcontroller remotely controls and monitors the current driver, temperature controller, and PID lock circuit for each diode laser simultaneously. The current driver output is accurate to within 2 micro-amps and repeatable to with a few nano-amps. The noise spectral density of the current …

Background-Oriented Schlieren Pattern Optimization, Jeffery E. Hartberger

Theses and Dissertations

This paper describes a test series to investigate background patterns used for the Background-Oriented Schlieren field density measurement technique. Several varying background patterns were substituted under similar fluid density conditions to visualize and isolate the effects of patterns in the background images. A qualitative comparison was completed of the flow visualization results of each background pattern to categorize background conditions that improved the flow visualization image. Changes in background patterns revealed significant changes in flow visualization. Pattern contrast, spacing and sizing all played large parts in the quality of the visual density gradient imaging during the test series.

Second-Order Weak Lensing From Modified Gravity, R. Ali Vanderveld, Robert R. Caldwell, Jason Rhodes

Dartmouth Scholarship

We explore the sensitivity of weak gravitational lensing to second-order corrections to the spacetime metric within a cosmological adaptation of the parametrized post-Newtonian framework. Whereas one might expect nonlinearities of the gravitational field to introduce non-Gaussianity into the statistics of the lensing convergence field, we show that such corrections are actually always small within a broad class of scalar-tensor theories of gravity. We show this by first computing the weak lensing convergence within our parametrized framework to second order in the gravitational potential, and then computing the relevant post-Newtonian parameters for scalar-tensor gravity theories. In doing so we show that …

The Lick Agn Monitoring Project 2011: Reverberation Mapping Of Markarian 50, Aaron J. Barth, Anna Pancoast, Shawn J. Thorman, Vardha N. Bennert, David J. Sand, Weidong Li, Gabriela Canalizo, Alexei V. Filippenko, Elinor L. Gates, Jenny E. Greene, Matthew A. Malkan, Daniel Stern, Tommaso Treu, Jong-Hak Woo, Roberto J. Assef, Hyun-Jin Bae, Brendon J. Brewer, Tabitha Buehler, S. Bradley Cenko, Kelsey I. Clubb, Michael C. Cooper, Aleksandar M. Diamond-Stanic, Kyle D. Hiner, Sebastian F. Hönig, Michael D. Joner, Michael T. Kandrashoff, C. David Laney, Mariana S. Lazarova, A. M. Nierenberg, Dawoo Park, Jeffrey M. Silverman, Donghoon Son, Alessandro Sonnenfeld, Erik J. Tollerud, Jonelle L. Walsh, Richard Walters, Robert L. Da Silva, Michele Fumagalli, Michael D. Gregg, Chelsea E. Harris, Eric Y. Hsiao, Jeffrey Lee, Liliana Lopez, Jacob Rex, Nao Suzuki, Jonathan R. Trump, David Tytler, Gábor Worseck, Hassan M. Yesuf

Physics

The Lick AGN Monitoring Project 2011 observing campaign was carried out over the course of 11 weeks in spring 2011. Here we present the first results from this program, a measurement of the broad-line reverberation lag in the Seyfert 1 galaxy Mrk 50. Combining our data with supplemental observations obtained prior to the start of the main observing campaign, our data set covers a total duration of 4.5 months. During this time, Mrk 50 was highly variable, exhibiting a maximum variability amplitude of a factor of ~4 in the U-band continuum and a factor of ~2 in the Hβ …

Veritas Observations Of Gamma-Ray Bursts Detected By Swift, V. A. Acciari, E. Aliu, T. Arlen, T. Aune, M. Beilicke, W. Benbow, S. M. Bradbury, J. H. Buckley, V. Bugaev, K. Byrum, A. Cannon, A. Cesarini, J. L. Christiansen, L. Ciupik, E. Collins-Hughes, M. P. Connolly, W. Cui, C. Duke, M. Errando, A. Falcone, J. P. Finley, G. Finnegan, L. Fortson, A. Furniss, N. Galante, D. Gall, S. Godambe, S. Griffin, J. Grube, R. Guenette, G. Gyuk, D. Hanna, J. Holder, G. Hughes, C. M. Hui, T. B. Humensky, D. J. Jackson, P. Kaaret, N. Karlsson, M. Kertzman, D. Kieda, H. Krawczynski, F. Krennrich, M. J. Lang, A. S. Madhavan, G. Maier, S. Mcarthur, A. Mccann, P. Moriarty, M. D. Newbold, R. A. Ong, M. Orr, A. N. Otte, N. Park, J. S. Perkins, M. Pohl, H. Prokoph, J. Quinn, K. Ragan, L. C. Reyes, P. T. Reynolds, E. Roache, H. J. Rose, J. Ruppel, D. B. Saxon, M. Schroedter, G. H. Sembroski, G. D. Şentürk, A. W. Smith, D. Staszak, S. P. Swordy, G. Tešić, M. Theiling, S. Thibadeau, K. Tsurusaki, A. Varlotta, V. V. Vassiliev, S. Vincent, M. Vivier, S. P. Wakely, J. E. Ward, T. C. Weekes, A. Weinstein, T. Weisgarber, D. A. Williams, M. Wood

Physics

We present the results of 16 Swift-triggered Gamma-ray burst (GRB) follow-up observations taken with the Very Energetic Radiation Imaging Telescope Array System (VERITAS) telescope array from 2007 January to 2009 June. The median energy threshold and response time of these observations were 260 GeV and 320 s, respectively. Observations had an average duration of 90 minutes. Each burst is analyzed independently in two modes: over the whole duration of the observations and again over a shorter timescale determined by the maximum VERITAS sensitivity to a burst with a t^−1.5 time profile. This temporal model is characteristic of GRB …

A New Mass Spectrometer For Upper Atmospheric Measurements In The Auroral Region, Addison E. Everett, James S. Dyer, Mike Watson, Wayne Sanderson, Scott Schicker, Dalon Work, Christopher J. Mertens, Scott M. Bailey, Erik A. Syrstad

Graduate Student Posters

We have previously presented a new rocket-borne time-of-flight mass spectrometer (TOF-MS) for measurements in the mesosphere / lower thermosphere (MLT). Traditionally, mass spectrometry in the MLT has been difficult, mainly due to the elevated ambient pressures of the MLT and high speeds of a sounding rocket flight, which affect the direct sampling of the ambient atmosphere and spatial resolution. The TOF-MS is a versatile, inherently adaptable, axial-sampling instrument, capable of operating in a traditional TOF mode or in a multiplexing Hadamard-transform mode where high spatial resolution is desired. To minimize bow shock effects at low altitudes (~70-110km), the ram surface …

Viscoelastic Transition And Yield Strain Of The Folded Protein, Yong Wang, Giovanni Zocchi

Physics Faculty Publications and Presentations

For proteins, the mechanical properties of the folded state are directly related to function, which generally entails conformational motion. Through sub-Angstrom resolution measurements of the AC mechanical susceptibility of a globular protein we describe a new fundamental materials property of the folded state. For increasing amplitude of the forcing, there is a reversible transition from elastic to viscoelastic response. At fixed frequency, the amplitude of the deformation is piecewise linear in the force, with different slopes in the elastic and viscoelastic regimes. Effectively, the protein softens beyond a yield point defined by this transition. We propose that ligand induced conformational …

Nanozeolites Doped Photopolymer Layers With Reduced Shrinkage, Mohesh Moothanchery, Izabela Naydenova, Svetlana Mintova, Vincent Toal

Articles

An acrylamide based photopolymer doped with pure silica MFI-type zeolite (silicalite-1) nanoparticles has been characterized for holographic recording purposes. The concentrations of the silicalite-1 nanoparticles in the photopolymer layers were 1, 2.5, 5 and 7.5 wt.%. The inclusion of silicalite-1 nanoparticle in the photopolymer has resulted in an increase of the diffraction efficiency by up to 40%, and decrease of the shrinkage from 1.32% to 0.57%. The best results were obtained in layers doped with 5 wt.% silicalite-1 nanoparticles.

Two-Dimensional Electron Gas At Oxide Interfaces, Karolina Janicka

Department of Physics and Astronomy: Dissertations, Theses, and Student Research

Extraordinary phenomena can occur at the interface between two oxide materials. A spectacular example is a formation of a two-dimensional electron gas (2DEG) at the SrTiO₃/LaAlO₃ interface. In this dissertation the properties of the 2DEG are investigated from first principles.

The spatial extent of the 2DEG formed at the SrTiO₃/LaAlO₃ n-type interface is studied. It is shown that the confinement of the 2DEG is controlled by metal induced gap states formed in the band gap of SrTiO₃. The confinement width is then determined by the attenuation length of the metal induced gap …

The Design And Construction Of A Green Laser And Fabry-Perot Cavity System For Jefferson Lab's Hall A Compton Polarimeter, Abdurahim Rakhman

Physics - Dissertations

A high finesse Fabry-Perot cavity with a frequency doubled green laser (CW, 532 nm) have been built and installed in Hall A of Jefferson Lab for high precision Compton polarimetry project in spring of 2010. It provides a high intensity circularly polarized photon target for measuring the polarization of electron beam with energies from 1.0 GeV to 11.0 GeV in a nondestructive manner. The IR beam (CW, 1064 nm) from a Ytterbium doped fiber laser amplifier seeded by a Nd:YAG narrow linewidth NPRO laser is frequency doubled in by a single-pass Periodically Poled Lithium Niobate (PPMgLN) crystal. The maximum achieved …

An Extension Of The Rishon Model, Paul Finkler

Paul Finkler Papers

We present an extension of the Rishon Model of Harari, et. al. [1] [2] [3] In that model, the first generation leptons and quarks are each made from three rishons of two varieties, T and V as follows: v_e = V V V , e⁺ = T T T , d = T V V , and u = T T V . In addition to the original rishons and their anti-rishons T and V , we introduce the dark rishon X and its anti-rishon X; all have spin 1/2.

An exciting possibility that emerges from this idea …

Thermodynamics And Phase Transitions For The Heisenberg Model On The Pinwheel Distorted Kagome Lattice, Ehsan Khatami, Rajiv Singh, Marcos Rigol

Faculty Publications

We study the Heisenberg model on the pinwheel distorted kagome lattice as observed in the material Rb2Cu3SnF12. Experimentally relevant thermodynamic properties at finite temperatures are computed utilizing numerical linked-cluster expansions. We also develop a Lanczos-based, zero-temperature, numerical linked-cluster expansion to study the approach of the pinwheel distorted lattice to the uniform kagome-lattice Heisenberg model. We find strong evidence for a phase transition before the uniform limit is reached, implying that the ground state of the kagome-lattice Heisenberg model is likely not pinwheel dimerized and is stable to finite pinwheel-dimerizing perturbations.

Developing Hybrid Approaches To Predict Pka Values Of Ionizable Groups, Shawn Witham, Kemper Talley, Lin Wang, Zhe Zhang, Daquan Gao, Wei Yang, Emil Alexov

Publications

Accurate predictions of pKa values of titratable groups require taking into account all relevant processes associated with the ionization/deionization. Frequently, however, the ionization does not involve significant structural changes and the dominating effects are purely electrostatic in origin allowing accurate predictions to be made based on the electrostatic energy difference between ionized and neutral forms alone using a static structure. On another hand, if the change of the charge state is accompanied by a structural reorganization of the target protein, then the relevant conformational changes have to be taken into account in the pKa calculations. Here we report a hybrid …

Progress In The Prediction Of Pka Values In Proteins, Emil Alexov, Ernest L. Mehler, Nathan Baker, Antonio Baptista, Yong Huang, Francesca Milletti, Jens Erik Nielsen, Damien Farrell, Tommy Carstensen, Mats H.M. Olsson, Jana K. Shen, Jim Warwicker, Sarah Williams, J Michael Word

Publications

The pK_a-cooperative aims to provide a forum for experimental and theoretical researchers interested in protein pK_a values and protein electrostatics in general. The first round of the pK_a-cooperative, which challenged computational labs to carry out blind predictions against pK_as experimentally determined in the laboratory of Bertrand Garcia-Moreno, was completed and results discussed at the Telluride meeting (July 6–10, 2009). This article serves as an introduction to the reports submitted by the blind prediction participants that will be published in a special issue of PROTEINS: Structure, Function and Bioinformatics. …