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Dimension Reduction Techniques For High Dimensional And Ultra-High Dimensional Data, Subha Datta Dec 2019

Dimension Reduction Techniques For High Dimensional And Ultra-High Dimensional Data, Subha Datta

Dissertations

This dissertation introduces two statistical techniques to tackle high-dimensional data, which is very commonplace nowadays. It consists of two topics which are inter-related by a common link, dimension reduction.

The first topic is a recently introduced classification technique, the weighted principal support vector machine (WPSVM), which is incorporated into a spatial point process framework. The WPSVM possesses an additional parameter, a weight parameter, besides the regularization parameter. Most statistical techniques, including WPSVM, have an inherent assumption of independence, which means the data points are not connected with each other in any manner. But spatial data violates this assumption. Correlation between …


Amyloid Proteins And Fibrils Stability, Farbod Mahmoudinobar Dec 2019

Amyloid Proteins And Fibrils Stability, Farbod Mahmoudinobar

Dissertations

Compared to globular proteins that have a stable native structure, intrinsically disordered peptides (IDP) sample an ensemble of structures without folding into a native conformation.One example of IDP is the amyloid-beta(Abeta) protein which is the main constituent of senile plaques in the brain of Alzheimer's patients.Understanding the process by which IDPs undergo structural changes to form oligomers that eventually aggregate into senile plaques/amyloid fibrils may significantly advance the development of novel therapeutic methods to treat neurodegenerative diseases, for which there is no cure to date. This dissertation has two main objectives. The first one is to investigate and identify structural …


Multi-Wavelength Investigation Of Energy Release And Chromospheric Evaporation In Solar Flares, Viacheslav M. Sadykov May 2019

Multi-Wavelength Investigation Of Energy Release And Chromospheric Evaporation In Solar Flares, Viacheslav M. Sadykov

Dissertations

For a comprehensive understanding of the energy release and chromospheric evaporation processes in solar flares it is necessary to perform a combined multi-wavelength analysis using observations from space-based and ground-based observatories, and compare the results with predictions of the radiative hydrodynamic (RHD) flare models. Initially, the case study of spatially-resolved chromospheric evaporation properties for an M 1.0-class solar flare (SOL2014-06-12T21:12) using data form IRIS (Interface Region Imaging Spectrograph), HMI/SDO (Helioseismic and Magnetic Imager onboard Solar Dynamics Observatory), and VIS/GST (Visible Imaging Spectrometer at Goode Solar Telescope), demonstrate a complicated nature of evaporation and its connection to the magnetic field topology. …


Rare Event Sampling In Applied Stochastic Dynamical Systems, Yiming Yu May 2019

Rare Event Sampling In Applied Stochastic Dynamical Systems, Yiming Yu

Dissertations

Predicting rare events is a challenging problem in many complex systems arising in physics, chemistry, biology, and materials science. Simulating rare events is often prohibitive in such systems due to their high dimensionality and the numerical cost of their simulation, yet analytical expressions for rare event probabilities are usually not available. This dissertation tackles the problem of approximation of the probability of rare catastrophic events in optical communication systems and spin-torque magnetic nanodevices. With the application of the geometric minimum action method, the probability of pulse position shifts or other parameter changes in a model of an actively mode-locked laser …