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2014

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Articles 151 - 180 of 181

Full-Text Articles in Other Environmental Sciences

Getting Plant Conservation Right (Or Not): The Case Of The United States, Kayri Havens, Andrea T. Kramer, Edward O. Guerrant Jr. Jan 2014

Getting Plant Conservation Right (Or Not): The Case Of The United States, Kayri Havens, Andrea T. Kramer, Edward O. Guerrant Jr.

Environmental Science and Management Faculty Publications and Presentations

Effective plant conservation includes addressing basic needs such as information about species distribution and rarity; research, management, education, and training capacity to mitigate threats facing threatened species; policy and funding to support continued capacity and conservation; and, ultimately, a public that understands and supports the importance of plants and the need for their conservation. Coordination of plant conservation efforts is also needed to ensure that resources and expertise are used in a strategic, efficient, and effective manner.We argue that no country is currently getting plant conservation right; plants are becoming increasingly rare around the world. Plants are often not fully …

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Adverse Outcome Pathway And Risks Of Anticoagulant Rodenticides To Predatory Wildlife, Barnett A. Rattner, Rebecca S. Lazarus, John E. Elliott, Richard F. Shore, Nico Van Den Brink Jan 2014

Adverse Outcome Pathway And Risks Of Anticoagulant Rodenticides To Predatory Wildlife, Barnett A. Rattner, Rebecca S. Lazarus, John E. Elliott, Richard F. Shore, Nico Van Den Brink

United States Geological Survey: Staff Publications

Despite a long history of successful use, routine application of some anticoagulant rodenticides (ARs) may be at a crossroad due to new regulatory guidelines intended to mitigate risk. An adverse outcome pathway for ARs was developed to identify information gaps and end points to assess the effectiveness of regulations. This framework describes chemical properties of ARs, established macromolecular interactions by inhibition of vitamin K epoxide reductase, cellular responses including altered clotting factor processing and coagulopathy, organ level effects such as hemorrhage, organism responses with linkages to reduced fitness and mortality, and potential consequences to predator populations. Risk assessments have led …

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Improving The Representation Of Roots In Terrestrial Models, Erica A.H. Smithwick, Melissa S. Lucash, M. Luke Mccormack, Gajan Sivandran Jan 2014

Improving The Representation Of Roots In Terrestrial Models, Erica A.H. Smithwick, Melissa S. Lucash, M. Luke Mccormack, Gajan Sivandran

Environmental Science and Management Faculty Publications and Presentations

Root biomass, root production and lifespan, and root-mycorrhizal interactions govern soil carbon fluxes and resource uptake and are critical components of terrestrial models. However, limitations in data and confusions over terminology, together with a strong dependence on a small set of conceptual frameworks, have limited the exploration of root function in terrestrial models. We review the key root processes of interest to both field ecologists and modelers including root classification, production, turnover, biomass, resource uptake, and depth distribution to ask (1) what are contemporary approaches for modeling roots in terrestrial models? and (2) can these approaches be improved via recent …

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The Effects Of Mountaintop Removal Mining And Valley Fills On Stream Salamander Communities, Brenee' Lynn Muncy Jan 2014

The Effects Of Mountaintop Removal Mining And Valley Fills On Stream Salamander Communities, Brenee' Lynn Muncy

Theses and Dissertations--Forestry and Natural Resources

Mountaintop removal mining and valley filling (MTR/VF) is a common form of land conversion in Central Appalachia and threatens the integrity of stream ecosystems. We investigated the effects of MTR/VF on stream salamander occupancy probabilities and community structure by conducting area constrained active searches for stream salamanders within intermittent streams located in mature forest (i.e., control) and those impacted by MTR/VF. During March to June of 2013, we detected five stream salamander species (Desmognathus fuscus, D. monticol, Eurycea cirrigera, Pseudotriton ruber, and Gyrinophilus porphyriticus) and found that the probability of occupancy was greatly reduced in MTR/VF streams compared …

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Reconstruction Of The Hirnantian (Late Ordovician) Palaeotopography In The Upper Yangtze Region, Linna Zhang, Junxuan Fan, Qing Chen, Shuang-Ye Wu Jan 2014

Reconstruction Of The Hirnantian (Late Ordovician) Palaeotopography In The Upper Yangtze Region, Linna Zhang, Junxuan Fan, Qing Chen, Shuang-Ye Wu

Department of Earth, Environment and Sustainability Faculty Publications

Reconstruction of the Hirnantian (Late Ordovician) palaeotopography in South China is important for understanding the distribution pattern of the Hirnantian marine depositional environment. In this study, we reconstructed the Hirnantian palaeotopography in the Upper Yangtze region based on the rankings of the palaeo-water depths, which were inferred according to the lithofacies and biofacies characteristics of the sections. Data from 374 Hirnantian sections were collected and standardized through the online Geobiodiversity Database. The Ordinary Kriging interpolation method in the ArcGIS software was applied to create the continuous surface of the palaeo-water depths, i.e. the Hirnantian palaeotopography. Meanwhile, the line transect analysis …

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Effects Of Including Saponins (Micro-Aid®) On Intake, Rumenfermentation And Digestibility In Steers Fed Low-Qualityprairie Hay, C P. Mcmurphy, A J. Sexten, G L. Mourer, E D. Sharman, S J. Trojan, M J. Rincker, W K. Coblentz, D L. Lalman Jan 2014

Effects Of Including Saponins (Micro-Aid®) On Intake, Rumenfermentation And Digestibility In Steers Fed Low-Qualityprairie Hay, C P. Mcmurphy, A J. Sexten, G L. Mourer, E D. Sharman, S J. Trojan, M J. Rincker, W K. Coblentz, D L. Lalman

United States Department of Agriculture-Agricultural Research Service / University of Nebraska-Lincoln: Faculty Publications

Sixteen ruminally cannulated crossbred steers (529 ± 45 kg initial body weight, BW) wereused to evaluate in situ dry matter (DM), neutral detergent fiber (aNDF), and N degrada-tion characteristics of low-quality prairie hay, blood urea-N (BUN) and rumen fermentationparameters in steers provided a protein supplement with or without Micro-Aid®(MA; plantderived saponin). Steers were allowed ad libitum access to chopped prairie hay (49 g crudeprotein (CP)/kg DM and 738 g aNDF/kg DM) and randomly assigned to one of four treat-ments: (1) no supplement (C), (2) cottonseed meal and wheat middlings: 920 g DM/d (PC;positive control), (3) MA added to PC to …

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Land Cover Changes And Their Biogeophysical Effects On Climate, Rezaul Mahmood Jan 2014

Land Cover Changes And Their Biogeophysical Effects On Climate, Rezaul Mahmood

School of Natural Resources: Faculty Publications

No abstract provided.

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Assessing Satellite-Based Start-Of-Season Trends In The U.S High Plains, Rezaul Mahmood Jan 2014

Assessing Satellite-Based Start-Of-Season Trends In The U.S High Plains, Rezaul Mahmood

School of Natural Resources: Faculty Publications

No abstract provided.

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Taphonomic Considerations Of A Whipworm Infection In A Mummy From The Dominican Church Of The Holy Spirit, Vilnius, Lithuania, Johnica J. Morrow, Annie S. Larsen, Dario Piombino-Mascali, Rimantas Jankauskas, Justina Kozakaitė, Adauto Araújo, Karl J. Reinhard Jan 2014

Taphonomic Considerations Of A Whipworm Infection In A Mummy From The Dominican Church Of The Holy Spirit, Vilnius, Lithuania, Johnica J. Morrow, Annie S. Larsen, Dario Piombino-Mascali, Rimantas Jankauskas, Justina Kozakaitė, Adauto Araújo, Karl J. Reinhard

School of Natural Resources: Faculty Publications

In the present study, the abdominal contents of 10 mummies from beneath the Dominican Church of the Holy Spirit in Vilnius, Lithuania, were examined for the presence of helminth parasites using standard archaeoparasitological techniques. Of the mummies examined, only one individual presented with evidence of parasitism. This individual was infected with both Trichuris trichiura and Ascaris lumbricoides (5,222 parasite eggs/gram). The conditions of many of the T. trichiura eggs suggest that a fortuitously embedded female whipworm decomposed within the individual’s gut to release the eggs, as opposed to the eggs actually being passed by the adult helminth. This study highlights …

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Nongeocentric Axial Dipole Field Behavior During The Mono Lake Excursion, Robert M. Negrini, Daniel T. Mccuan, Robert A. Horton, James D. Lopez, William S. Cassata, James E. T. Channell, Kenneth L. Verosub, Jeffrey R. Knott, Robert S. Coe, Joseph C. Liddicoat, Steven P. Lund, Larry Benson, Andrei M. Sarna-Wojcicki Jan 2014

Nongeocentric Axial Dipole Field Behavior During The Mono Lake Excursion, Robert M. Negrini, Daniel T. Mccuan, Robert A. Horton, James D. Lopez, William S. Cassata, James E. T. Channell, Kenneth L. Verosub, Jeffrey R. Knott, Robert S. Coe, Joseph C. Liddicoat, Steven P. Lund, Larry Benson, Andrei M. Sarna-Wojcicki

United States Geological Survey: Staff Publications

A new record of the Mono Lake excursion (MLE) is reported from the Summer Lake Basin of Oregon, USA. Sediment magnetic properties indicate magnetite as the magnetization carrier and imply suitability of the sediments as accurate recorders of the magnetic field including relative paleointensity (RPI) variations. The magnitudes and phases of the declination, inclination, and RPI components of the new record correlate well with other coeval but lower resolution records from western North America including records from the Wilson Creek Formation exposed around Mono Lake. The virtual geomagnetic pole (VGP) path of the new record is similar to that from …

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Wetland Reserve Program Enhances Site Occupancy And Species Richness In Assemblages Of Anuran Amphibians In The Mississippi Alluvial Valley, Usa, Susan C. Walls, J. Hardin Waddle, Stephen P. Faulkner Jan 2014

Wetland Reserve Program Enhances Site Occupancy And Species Richness In Assemblages Of Anuran Amphibians In The Mississippi Alluvial Valley, Usa, Susan C. Walls, J. Hardin Waddle, Stephen P. Faulkner

United States Geological Survey: Staff Publications

We measured amphibian habitat use to quantify the effectiveness of conservation practices implemented under the Wetland Reserve Program (WRP), an initiative of the U.S. Department of Agriculture’s Natural Resources Conservation Service. From February to June 2007, we quantified calling male anurans in cultivated cropland, former cultivated cropland restored through the WRP, and mature bottomland hardwood forest. Sites were located in two watersheds within the Mississippi Alluvial Valley of Arkansas and Louisiana, USA. We estimated detection probability and site occupancy within each land use category using a Bayesian hierarchical model of community species occurrence, and derived an estimate of species richness …

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Mapping Irrigated Areas In Afghanistan Over The Past Decade Using Modis Ndvi, Md. Shahriar Pervez, Michael Budde, James Rowland Jan 2014

Mapping Irrigated Areas In Afghanistan Over The Past Decade Using Modis Ndvi, Md. Shahriar Pervez, Michael Budde, James Rowland

United States Geological Survey: Staff Publications

Agricultural production capacity contributes to food security in Afghanistan and is largely dependent on irrigated farming, mostly utilizing surface water fed by snowmelt. Because of the high contribution of irrigated crops (> 80%) to total agricultural production, knowing the spatial distribution and year-to-year variability in irrigated areas is imperative to monitoring food security for the country. We used 16-day composites of the Normalized Difference Vegetation Index (NDVI) from the Moderate Resolution Imaging Spectroradiometer (MODIS) sensor to create 23-point time series for each year from 2000 through 2013. Seasonal peak values and time series were used in a threshold-dependent decision tree …

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Nutrient Composition Of Selected Traditional United States Northern Plains Native American Plant Foods, Katherine M. Phillips, Pamela R. Pehrsson, Wanda W. Agnew, Angela J. Scheett, Jennifer R. Follett, Henry C. Lukaski, Kristine Y. Patterson Jan 2014

Nutrient Composition Of Selected Traditional United States Northern Plains Native American Plant Foods, Katherine M. Phillips, Pamela R. Pehrsson, Wanda W. Agnew, Angela J. Scheett, Jennifer R. Follett, Henry C. Lukaski, Kristine Y. Patterson

United States Department of Agriculture-Agricultural Research Service / University of Nebraska-Lincoln: Faculty Publications

Ten wild plants (cattail broad leaf shoots, chokecherries, beaked hazelnuts, lambsquarters, plains prickly pear, prairie turnips, stinging nettles, wild plums, raspberries, and rose hips) from three Native American reservations in North Dakota were analyzed to expand composition information of traditional foraged plants. Proximates, dietary fiber (DF), vitamins, minerals, carotenoids, and folate vitamers were assayed using standard methods and reference materials. Per serving, all were rich in Mn (100–2808 mg). Several provided >10% DRI of Fe (cattail shoots, steamed lambsquarters, and prairie turnips), Ca (steamed lambsquarters, prickly pear, and prairie turnips), Mg (cattail shoots, lambsquarters, prickly pear, and prairie turnips), vitamins …

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Structural Equation Models Of Vmt Growth In Us Urbanised Areas, Reid Ewing, Shima Hamidi, Frank Gallivan, Arthur C. Nelson, James B. Grace Jan 2014

Structural Equation Models Of Vmt Growth In Us Urbanised Areas, Reid Ewing, Shima Hamidi, Frank Gallivan, Arthur C. Nelson, James B. Grace

United States Geological Survey: Staff Publications

Vehicle miles travelled (VMT) is a primary performance indicator for land use and transportation, bringing with it both positive and negative externalities. This study updates and refines previous work on VMT in urbanised areas, using recent data, additional metrics and structural equation modelling (SEM). In a cross-sectional model for 2010, population, income and freeway capacity are positively related to VMT, while gasoline prices, development density and transit service levels are negatively related. Findings of the cross-sectional model are generally confirmed in a more tightly controlled longitudinal study of changes in VMT between 2000 and 2010, the first model of its …

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Merging Remote Sensing Data And National Agricultural Statistics To Model Change In Irrigated Agriculture, Jesslyn F. Brown, Md Shahriar Pervez Jan 2014

Merging Remote Sensing Data And National Agricultural Statistics To Model Change In Irrigated Agriculture, Jesslyn F. Brown, Md Shahriar Pervez

United States Geological Survey: Staff Publications

Over 22 million hectares (ha) of U.S. croplands are irrigated. Irrigation is an intensified agricultural land use that increases crop yields and the practice affects water and energy cycles at, above, and below the land surface. Until recently, there has been a scarcity of geospatially detailed information about irrigation that is comprehensive, consistent, and timely to support studies tying agricultural land use change to aquifer water use and other factors. This study shows evidence for a recent overall net expansion of 522 thousand ha across the U.S. (2.33%) and 519 thousand ha (8.7%) in irrigated cropped area across the High …

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Comparing Crop Land Net Primary Production Estimates From Inventory, A Satellite-Based Model, And A Process-Based Model In The Midwest Of The United States Zhengpeng, Zhengpeng Li, Shuguang Liu, Zhengxi Tan, Normann B. Bliss, Claudia J. Young, Tristram O. West, Stephen M. Ogle Jan 2014

Comparing Crop Land Net Primary Production Estimates From Inventory, A Satellite-Based Model, And A Process-Based Model In The Midwest Of The United States Zhengpeng, Zhengpeng Li, Shuguang Liu, Zhengxi Tan, Normann B. Bliss, Claudia J. Young, Tristram O. West, Stephen M. Ogle

United States Geological Survey: Staff Publications

Accurately quantifying the spatial and temporal variability of net primary production (NPP) for crop-lands is essential to understand regional cropland carbon dynamics. We compared three NPP estimates for croplands in the Midwestern United States: inventory-based estimates using crop yield data from the U.S. Department of Agriculture (USDA) National Agricultural Statistics Service (NASS); estimates from the satellite-based Moderate Resolution Imaging Spectro radiometer (MODIS) NPP product; and esti-mates from the General Ensemble bio geochemical Modeling System (GEMS) process-based model. The three methods estimated mean NPP in the range of 469–687 g C m−2yr−1and total NPP in the range …

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Summary Of The Snowmastodon Project Special Volume: A High-Elevation, Multi-Proxy Biotic And Environmental Record Of Mis 6–4 From The Ziegler Reservoir Fossil Site, Snowmass Village, Colorado, Usa, Ian M. Miller, Jeffrey S. Pigati, R. Scott Anderson, Kirk R. Johnson, Shannon A. Mahan, Thomas A. Ager, Richard G. Baker, Maarten Blaauw, Jordon Bright, Peter M. Brown, Bruce Bryant, Zachary T. Calamari, Paul E. Carrara, Michael D. Cherney, John R. Demboski, Scott A. Elias, Daniel C. Fisher, Harrison J. Gray, Danielle R. Haskett, Jeffrey S. Honke, Stephen T. Jackson, Gonzalo Jiménez- Moreno, Douglas Kline, Eric M. Leonard, Nathaniel A. Lifton, Carol Lucking, H. Gregory Mcdonald, Dane M. Miller, Daniel R. Muhs, Stephen E. Nash, Cody Newton, James B. Paces, Lesley Petrie, Mitchell A. Plummer, David F. Porinchu, Adam N. Rountrey, Eric Scott, Joseph J.W. Sertich, Saxon E. Sharpe, Gary L. Skipp, Laura E. Strickland, Richard K. Stucky, Robert S. Thompson, Jim Wilson Jan 2014

Summary Of The Snowmastodon Project Special Volume: A High-Elevation, Multi-Proxy Biotic And Environmental Record Of Mis 6–4 From The Ziegler Reservoir Fossil Site, Snowmass Village, Colorado, Usa, Ian M. Miller, Jeffrey S. Pigati, R. Scott Anderson, Kirk R. Johnson, Shannon A. Mahan, Thomas A. Ager, Richard G. Baker, Maarten Blaauw, Jordon Bright, Peter M. Brown, Bruce Bryant, Zachary T. Calamari, Paul E. Carrara, Michael D. Cherney, John R. Demboski, Scott A. Elias, Daniel C. Fisher, Harrison J. Gray, Danielle R. Haskett, Jeffrey S. Honke, Stephen T. Jackson, Gonzalo Jiménez- Moreno, Douglas Kline, Eric M. Leonard, Nathaniel A. Lifton, Carol Lucking, H. Gregory Mcdonald, Dane M. Miller, Daniel R. Muhs, Stephen E. Nash, Cody Newton, James B. Paces, Lesley Petrie, Mitchell A. Plummer, David F. Porinchu, Adam N. Rountrey, Eric Scott, Joseph J.W. Sertich, Saxon E. Sharpe, Gary L. Skipp, Laura E. Strickland, Richard K. Stucky, Robert S. Thompson, Jim Wilson

United States Geological Survey: Staff Publications

In North America, terrestrial records of biodiversity and climate change that span Marine Oxygen Isotope Stage (MIS) 5 are rare. Where found, they provide insight into how the coupling of the ocean–atmosphere system is manifested in biotic and environmental records and how the biosphere responds to climate change. In 2010–2011, construction at Ziegler Reservoir near Snowmass Village, Colorado (USA) revealed a nearly continuous, lacustrine/wetland sedimentary sequence that preserved evidence of past plant communities between ~140 and 55 ka, including all of MIS 5. At an elevation of 2705 m, the Ziegler Reservoir fossil site also contained thousands of well-preserved bones …

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Radiocarbon Dating Loess Deposits In The Mississippi Valley Using Terrestrial Gastropod Shells (Polygyridae, Helicinidae, And Discidae), Jeffrey S. Pigati, John Mcgeehin, Daniel R. Muhs, David A. Grimley, Jeffrey C. Nekola Jan 2014

Radiocarbon Dating Loess Deposits In The Mississippi Valley Using Terrestrial Gastropod Shells (Polygyridae, Helicinidae, And Discidae), Jeffrey S. Pigati, John Mcgeehin, Daniel R. Muhs, David A. Grimley, Jeffrey C. Nekola

United States Geological Survey: Staff Publications

Small terrestrial gastropod shells (mainly Succineidae) have been used successfully to date late Quaternary loess deposits in Alaska and the Great Plains. However, Succineidae shells are less common in loess deposits in the Mississippi Valley compared to those of the Polygyridae, Helicinidae, and Discidae families. In this study, we conducted several tests to determine whether shells of these gastropods could provide reliable ages for loess deposits in the Mississippi Valley. Our results show that most of the taxa that we investigated incorporate small amounts (1–5%) of old carbon from limestone in their shells, meaning that they should yield ages that …

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Geologic Setting And Stratigraphy Of The Ziegler Reservoir Fossil Site, Snowmass Village, Colorado, Jeffrey S. Pigati, Ian M. Miller, Kirk R. Johnson, Jeffrey S. Honke, Paul E. Carrara, Daniel R. Muhs, Gary Skipp, Bruce Bryant Jan 2014

Geologic Setting And Stratigraphy Of The Ziegler Reservoir Fossil Site, Snowmass Village, Colorado, Jeffrey S. Pigati, Ian M. Miller, Kirk R. Johnson, Jeffrey S. Honke, Paul E. Carrara, Daniel R. Muhs, Gary Skipp, Bruce Bryant

United States Geological Survey: Staff Publications

The geologic setting of the Ziegler Reservoir fossil site is somewhat unusual—the sediments containing the Pleistocene fossils were deposited in a lake on top of a ridge. The lake basin was formed near Snowmass Village, Colorado (USA) when a glacier flowing down Snowmass Creek Valley became thick enough to overtop a low point in the eastern valley wall and entered the head of Brush Creek Valley. When the glacier retreated at about 155–130 ka, near the end of Marine Oxygen Isotope Stage 6, the Brush Creek Valley lobe left behind a moraine that impounded a small alpine lake. The lake …

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Toxicity Of Pb‐Contaminated Soil To Japanese Quail (Coturnix Japonica) And The Use Of The Blood–Dietary Pb Slope In Risk Assessment, W. Nelson Beyer, Yu Chen, Paula Henry, Thomas May, David Mosby, Barnett A. Rattner, Valerie I. Shearn-Bochsler, Daniel Sprague, John Weber Jan 2014

Toxicity Of Pb‐Contaminated Soil To Japanese Quail (Coturnix Japonica) And The Use Of The Blood–Dietary Pb Slope In Risk Assessment, W. Nelson Beyer, Yu Chen, Paula Henry, Thomas May, David Mosby, Barnett A. Rattner, Valerie I. Shearn-Bochsler, Daniel Sprague, John Weber

United States Geological Survey: Staff Publications

This study relates tissue concentrations and toxic effects of Pb in Japanese quail (Coturnix japonica) to the dietary exposure of soil‐borne Pb associated with mining and smelting. From 0% to 12% contaminated soil, by weight, was added to 5 experimental diets (0.12 to 382mg Pb/kg, dry wt) and fed to the quail for 6 weeks. Benchmark doses associated with a 50% reduction in delta‐aminolevulinic acid dehydratase activity were 0.62mg Pb/kg in the blood, dry wt, and 27mg Pb/kg in the diet. Benchmark doses associated with a 20% increase in the concentration of erythrocyte protoporphyrin were 2.7mg Pb/kg in …

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Testing Metapopulation Concepts: Effects Of Patch Characteristics And Neighborhood Occupancy On The Dynamics Of An Endangered Lagomorph, Mitchell J. Eaton, Phillip T. Hughes, James E. Hines, James D. Nichols Jan 2014

Testing Metapopulation Concepts: Effects Of Patch Characteristics And Neighborhood Occupancy On The Dynamics Of An Endangered Lagomorph, Mitchell J. Eaton, Phillip T. Hughes, James E. Hines, James D. Nichols

United States Geological Survey: Staff Publications

Metapopulation ecology is a field that is richer in theory than in empirical results. Many existing empirical studies use an incidence function approach based on spatial patterns and key assumptions about extinction and colonization rates. Here we recast these assumptions as hypotheses to be tested using 18 years of historic detection survey data combined with four years of data from a new monitoring program for the Lower Keys marsh rabbit. We developed a new model to estimate probabilities of local extinction and colonization in the presence of nondetection, while accounting for estimated occupancy levels of neighboring patches. We used model …

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Probit Models For Capture-Recapture Data Subject To Imperfect Detection, Individual Heterogeneity And Misidentification, Brett T. Mcclinktock, Larissa L. Bailey, Brian P. Dreher, William A. Link Jan 2014

Probit Models For Capture-Recapture Data Subject To Imperfect Detection, Individual Heterogeneity And Misidentification, Brett T. Mcclinktock, Larissa L. Bailey, Brian P. Dreher, William A. Link

United States Geological Survey: Staff Publications

As noninvasive sampling techniques for animal populations have become more popular, there has been increasing interest in the development of capture-recapture models that can accommodate both imperfect detection and misidentification of individuals (e.g., due to genotyping error). However, current methods do not allow for individual variation in parameters, such as detection or survival probability. Here we develop misidentification models for capture-recapture data that can simultaneously account for temporal variation, behavioral effects and individual heterogeneity in parameters. To facilitate Bayesian inference using our approach, we extend standard probit regression techniques to latent multinomial models where the dimension and zeros of the …

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Testing Metapopulation Concepts: Effects Of Patch Characteristics And Neighborhood Occupancy On The Dynamics Of An Endangered Lagomorph, Mitchell J. Eaton, Phillip T. Hughes, James E. Hines, James D. Nichols Jan 2014

Testing Metapopulation Concepts: Effects Of Patch Characteristics And Neighborhood Occupancy On The Dynamics Of An Endangered Lagomorph, Mitchell J. Eaton, Phillip T. Hughes, James E. Hines, James D. Nichols

United States Geological Survey: Staff Publications

Metapopulation ecology is a field that is richer in theory than in empirical results. Many existing empirical studies use an incidence function approach based on spatial patterns and key assumptions about extinction and colonization rates. Here we recast these assumptions as hypotheses to be tested using 18 years of historic detection survey data combined with four years of data from a new monitoring program for the Lower Keys marsh rabbit. We developed a new model to estimate probabilities of local extinction and colonization in the presence of nondetection, while accounting for estimated occupancy levels of neighboring patches. We used model …

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Probit Models For Capture-Recapture Data Subject To Imperfect Detection, Individual Heterogeneity And Misidentification1, Brett T. Mcclintock, Larissa L. Bailey, Brian P. Dreher, William A. Link Jan 2014

Probit Models For Capture-Recapture Data Subject To Imperfect Detection, Individual Heterogeneity And Misidentification1, Brett T. Mcclintock, Larissa L. Bailey, Brian P. Dreher, William A. Link

United States Geological Survey: Staff Publications

As noninvasive sampling techniques for animal populations have become more popular, there has been increasing interest in the development of capture-recapture models that can accommodate both imperfect detection and misidentification of individuals (e.g., due to genotyping error). However, current methods do not allow for individual variation in parameters, such as detection or survival probability. Here we develop misidentification models for capture-recapture data that can simultaneously account for temporal variation, behavioral effects and individual heterogeneity in parameters. To facilitate Bayesian inference using our approach, we extended standard probit regression techniques to latent multinomial models where the dimension and zeros of the …

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Loess Records, Daniel R. Muhs, Stephen R. Cattle, Onn Crouvi, Denis-Didier Rousseau, Jimin Sun, Marcelo A. Zárate Jan 2014

Loess Records, Daniel R. Muhs, Stephen R. Cattle, Onn Crouvi, Denis-Didier Rousseau, Jimin Sun, Marcelo A. Zárate

United States Geological Survey: Staff Publications

Loess is aeolian sediment, dominated by silt-sized particles, that is identifiable in the field as a distinct sedimentary body. It covers a significant portion of the land surface of the Earth and as such constitutes one of the most important archives of long-term dust deposition. Large tracts of loess cover Europe, Asia, South America, and North America, and smaller loess bodies are found covering parts of Africa, the Middle East, New Zealand, and Australia. Loess thickness, particle size, and carbonate content decrease downwind from sources, trends that are powerful tools for reconstructing paleowinds. Many loess sections consist of relatively thick …

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Evidence Of Repeated Wildfires Prior To Human Occupation On San Nicolas Island, California, Jeffrey S. Pigati, John P. Mcgeehin, Gary L. Skipp, Daniel R. Muhs Jan 2014

Evidence Of Repeated Wildfires Prior To Human Occupation On San Nicolas Island, California, Jeffrey S. Pigati, John P. Mcgeehin, Gary L. Skipp, Daniel R. Muhs

United States Geological Survey: Staff Publications

Understanding how early humans on the California Channel Islands might have changed local fire regimes requires a baseline knowledge of the frequency of natural wildfires on the islands prior to human occupation. A sedimentary sequence that was recently discovered in a small canyon on San Nicolas Island contains evidence of at least 24 burn events that date to between ~37 and 25 ka (thousands of calibrated 14C years before present), well before humans entered North America. The evidence includes abundant macroscopic charcoal, blackened sediments, and discrete packages of oxidized, reddish-brown sediments that are similar in appearance to sedimentary features …

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Larval Mortality And Development For Rotation-Resistant And Rotation-Susceptible Populations Of Western Corn Rootworm On Bt Corn, N A. Tinsley, J L. Spencer, R E. Estes, J. R. Prasifka, P M. Schrader, B. W. French, M E. Gray Jan 2014

Larval Mortality And Development For Rotation-Resistant And Rotation-Susceptible Populations Of Western Corn Rootworm On Bt Corn, N A. Tinsley, J L. Spencer, R E. Estes, J. R. Prasifka, P M. Schrader, B. W. French, M E. Gray

United States Department of Agriculture-Agricultural Research Service / University of Nebraska-Lincoln: Faculty Publications

The western corn rootworm, Diabrotica virgifera virgifera LeConte, is one of the most economically important insect pests threatening the production of corn, Zea mays (L.), in the United States. Throughout its history, this insect has displayed considerable adaptability by overcoming a variety of pest management tactics, including the cultural practice of annual crop rotation. Since first reported in Illinois in the late 1980s, populations of the rotation-resistant western corn rootworm have spread over a wide area of the eastern Corn Belt. Currently, little information is available concerning the interaction of rotation resistance with the use of genetically modified corn expressing …

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Changing The Climate Narrative: How A Long-Term Climate Change Might Save Our Lives, Natalie P. Harreld Jan 2014

Changing The Climate Narrative: How A Long-Term Climate Change Might Save Our Lives, Natalie P. Harreld

CMC Senior Theses

The goal of this paper is to offer new insights into the climate change debate by shifting away from the heated anthropologic arguments that dominate politics, media, and popular science. Instead, I choose to rely on the long-term impacts of a changing climate on our planet. The paper begins with a break down of key processes involved in short-term and long-term climate change, using the latest research. After a foundational understanding of climate sciences is established, we will discuss the failure of the climate change debate in educating the general public about the facts of a changing climate. Finally, the …

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"Mining" For A Reference Condition In Southern West Virginia Streams, Matthew Rouch Jan 2014

"Mining" For A Reference Condition In Southern West Virginia Streams, Matthew Rouch

Theses and Dissertations

Quarterly samples were used to estimate assemblage-level (all species combined) fish production within three minimally-impacted, southern West Virginia streams. The total annual fish production estimate was highest in Slaunch Fork (37.52 kg∙ha-1∙y-1), a tributary of the Tug Fork River, and lowest in Cabin Creek (10.59 kg∙ha-1∙y-1), a Guyandotte River tributary. Creek Chub Semotilus atromaculatus, Mottled Sculpin Cottus bairdii and Blacknose Dace Rhinicthys atratulus were the most abundant species among sites, accounting for >90% of all sampled individuals. Reference condition criteria were also selected and metrics calculated for each of the three …

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A Not-So-Silent Spring: The Impacts Of Traffic Noise On Call Features Of The Bloody Bay Poison Frog (Mannophryne Olmonae), Catherine G. Clemmens Jan 2014

A Not-So-Silent Spring: The Impacts Of Traffic Noise On Call Features Of The Bloody Bay Poison Frog (Mannophryne Olmonae), Catherine G. Clemmens

Senior Independent Study Theses

No abstract provided.

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