Other Environmental Sciences Commons^™

Land Use, Landscapes, And Biological Invasions, Karie L. Decker, Craig R. Allen, Leonardo Acosta, Michelle L. Hellman, Christopher F. Jorgensen, Ryan J. Stutzman, Kody M. Unstad, Amy Williams, Matthew Yans

Nebraska Cooperative Fish and Wildlife Research Unit: Staff Publications

The negative effect of invasive species on native species, communities, and ecosystems is widely recognized, and the economic effects in the United States are estimated to be billions of dollars annually. Studies often examine traits of nonnative species or examine what makes a particular habitat invasible. To better understand the factors governing invasions, we used the flora of Nebraska to characterize and compare native and nonnative plant occurrences throughout the state. In addition, we assessed four critical landscape predictors of nonnative plant richness: human population size and three land cover attributes that included percentage of grassland, percentage of agriculture, and …

Predictions And Retrodictions Of The Hierarchical Representation Of Habitat In Heterogeneous Environments, Jurek Kolasa, Craig R. Allen, Jan Sendzimir, Craig A. Stow

Nebraska Cooperative Fish and Wildlife Research Unit: Staff Publications

Interaction between habitat and species is central in ecology. Habitat structure may be conceived as being hierarchical, where larger, more diverse, portions or categories contain smaller, more homogeneous portions. When this conceptualization is combined with the observation that species have different abilities to relate to portions of the habitat that differ in their characteristics, a number of known patterns can be derived and new patterns hypothesized. We propose a quantitative form of this habitat–species relationship by considering species abundance to be a function of habitat specialization, habitat fragmentation, amount of habitat, and adult body mass. The model reproduces and explains …

Droughtscape, Winter 2012, National Drought Mitigation Center

DroughtScape: Quarterly Newsletter of the National Drought Mitigation Center (2007–2023)

Drought Planning for Kansas Ranchers Jan. 21

South Hoping La Niña Dryness Stays Away

2011 Brought Record-Breaking Extent of D4

Reported Impacts Ease as Growing Season Ends

Disaster Planning in Nanjing at Hohai U

Ag, Fire and Water Supply Topped 2011 Impacts

Hurricane Disturbance And Recovery Of Energy Balance, Co2 Fluxes And Canopy Structure In A Mangrove Forest Of The Florida Everglades, Jordan G. Barr, Vic Engel, Thomas J. Smith, José D. Fuentes

United States Geological Survey: Staff Publications

Eddy covariance (EC) estimates of carbon dioxide (CO2) fluxes and energy balance are examined to investigate the functional responses of a mature mangrove forest to a disturbance generated by Hurricane Wilma on October 24, 2005 in the Florida Everglades. At the EC site, high winds from the hurricane caused nearly 100% defoliation in the upper canopy and widespread tree mortality. Soil temperatures down to −50 cm increased, and air temperature lapse rates within the forest canopy switched from statically stable to statically unstable conditions following the disturbance. Unstable conditions allowed more efficient transport of water vapor and CO₂ from …

Nest Predation, Food, And Female Age Explain Seasonal Declines In Clutch Size, Karie L. Decker, Courtney J. Conway, Joseph J. Fontaine

Nebraska Cooperative Fish and Wildlife Research Unit: Staff Publications

The selection pressures responsible for intra- and interspecific variation in avian clutch size have been debated for over half a century. Seasonal declines in clutch size represent one of the most robust patterns in avian systems, yet despite extensive research on the subject, the mechanisms underlying this pattern remain largely unknown. We tested a combination of experimental and observational predictions to evaluate ten hypotheses, representing both evolutionary and proximate mechanisms proposed to explain seasonal declines in avian clutch size. In line with long held life-history theory, we found strong support for both an evolved and proximate response to food availability …

Habitat Selection By Adult Walleye During Spawning Season In Irrigation Reservoirs: A Patch Occupancy Modeling Approach, Dustin R. Martin, Larkin A. Powell, Kevin L. Pope

Nebraska Cooperative Fish and Wildlife Research Unit: Staff Publications

Recruitment of walleye (Sander vitreus Mitchill) is limited in irrigation reservoirs of the Republican River basin in southwestern Nebraska. The causal mechanism for this limited recruitment is unknown, but may be related to a lack of suitable spawning habitat. Patch occupancy models were developed to describe variation in detection probability and habitat selection during spawning season using shoreline electrofishing data. Detection of adult walleye was negatively affected by water temperature, silt substrate, and woody cover. Adult walleye selected sites with cooler water temperatures and greater fetch at Enders Reservoir, and large rock substrate and no cover at Hugh Butler …

Copper Pellets Simulating Oral Exposure To Copper Ammunition: Absence Of Toxicity In American Kestrels (Falco Sparverius), J. Christian Franson, Lesanna L. Lahner, Carol U. Meteyer, Barnett A. Rattner

United States Geological Survey: Staff Publications

To evaluate the potential toxicity of copper

(Cu) in raptors that may consume Cu bullets, shotgun

pellets containing Cu, or Cu fragments as they feed on

wildlife carcasses, we studied the effects of metallic Cu

exposure in a surrogate, the American kestrel (Falco

sparverius). Sixteen kestrels were orally administered

5 mg Cu/g body mass in the form of Cu pellets

(1.18–2.00 mm in diameter) nine times during 38 days and

10 controls were sham gavaged on the same schedule. With

one exception, all birds retained the pellets for at least 1 h,

but most (69%) regurgitated pellets during …

Mapping Recent Decadal Climate Variations In Precipitation And Temperature Across Eastern Africa And The Sahel, Christopher Funk, Joel Michaelsen, Michael T. Marshall

United States Geological Survey: Staff Publications

This chapter presents a novel interpolation approach that combines long-term mean satellite observations, station data, and topographic fields to produce grids of climate normals and trends. The approach was developed by the Climate Hazard Group (CHG) at the University of California, Santa Barbara (UCSB), to support food security analyses for the U.S. Agency for International Development’s (USAID) Famine Early Warning Systems Network (FEWS NET). The resulting FEWS NET Climatology (FCLIM) combines moving window regressions (MWRs) with geostatistical interpolation (kriging). Satellite and topographic fields often exhibit strong local correlations with in situ measurements of air temperature and rainfall. The FCLIM method …

Development And Evaluation Of A Quantitative Pcr Assay Targeting Sandhill Crane (Grus Canadensis) Fecal Pollution, Hodon Ryu, Jingrang Lu, Jason Vogel, Michael Elk, Felipe Chávez-Ramírez, Nicholas Ashbolt, Jorge Santo Domingo

United States Environmental Protection Agency: Publications

While the microbial water quality in the Platte River is seasonally impacted by excreta from migrating cranes, there are no methods available to study crane fecal contamination. Here we characterized microbial populations in crane feces using phylogenetic analysis of 16S rRNA gene fecal clone libraries. Using these sequences, a novel crane quantitative PCR (Crane1) assay was developed, and its applicability as a microbial source tracking (MST) assay was evaluated by determining its host specificity and detection ability in environmental waters. Bacteria from crane excreta were dominated by bacilli and proteobacteria, with a notable paucity of sequences homologous to Bacteroidetes and …

Evaluation Of Elevated Bait Trays For Attracting Blackbirds (Icteridae) In Central North Dakota, George M. Linz, Jamison B. Winter, William J. Bleier

United States Department of Agriculture Wildlife Services: Staff Publications

Sunflower (Helianthus annuus L.) became an economically important crop in North Dakota in the 1970s, providing a major source of food for post-breeding blackbirds (Icteridae). Reducing local blackbird populations with rice grains treated with an avicide is one proposed alternative for reducing sunflower damage. In fall 2007 and 2008, we evaluated the idea of attracting blackbirds to rice-baited trays attached to wire cages supplied with live blackbirds. During our observations (1011 h), we saw 3888 birds, consisting of 25 species and 12 families, on the bait trays. Blackbirds made up 90.4% of the bird observations, whereas sparrows (Emberizidae) made …

Seasonal Variation In Heat Fluxes, Predicted Emissions Of Malodorants, And Wastewater Quality Of An Anaerobic Swine Waste Lagoon, Rezaul Mahmood

School of Natural Resources: Faculty Publications

No abstract provided.

Profitable Farms And Woodlands: A Practical Guide In Agroforestry For Landowners, Farmers And Ranchers, J. O. Idassi

United States Department of Agriculture, Forest Service / University of Nebraska-Lincoln: Faculty Publications

This handbook is part of an interdisciplinary, interinstitutional and comprehensive effort to develop a practical guide to assist underserved and limited resource small farmers and woodland owners to adopt best management technologies in agroforestry. Funding for this effort was provided through the USDA National Agroforestry Center (NAC) from the US Forest Service and the Natural Resources Conservation Service (NRCS) under cooperative agreement number 68-7482-7-361 with Tennessee State University, Cooperative Extension Program and the 1890/1862 Agroforestry Team.

This guide was prepared by an agroforestry team of research and extension specialists from the 1862 and 1890 Land Grant Universities in collaboration with …

Agroforestry: Accounting For Windbreak's Climate Change Contributions, Michele Schoeneberger, Jim Brandle, Xinhua Zhou, John Kort, Tom Sauer

United States Department of Agriculture, Forest Service / University of Nebraska-Lincoln: Faculty Publications

No abstract provided.

Gene Transcription In Sea Otters (Enhydra Lutris); Development Of A Diagnostic Tool For Sea Otter And Ecosystem Health, Lizabeth Bowen, A. Keith Miles, Michael Murray, Martin Haulena, Judy Tuttle, William Van Bonn, Lance Adams, James L. Bodkin, Brenda Ballachey, James A. Estes, M. Tim Tinker, Robin Keister, Jeffrey L. Stott

United States Geological Survey: Staff Publications

Gene transcription analysis for diagnosing or monitoring wildlife health requires the ability to distinguish pathophysiological change from natural variation. Herein, we describe methodology for the development of quantitative real-time polymerase chain reaction (qPCR) assays to measure differential transcript levels of multiple immune function genes in the sea otter (Enhydra lutris); sea otter-specific qPCR primer sequences for the genes of interest are defined. We establish a ‘reference’ range of transcripts for each gene in a group of clinically healthy captive and free-ranging sea otters. The 10 genes of interest represent multiple physiological systems that play a role in immuno-modulation, …

Do Bioclimate Variables Improve Performance Of Climate Envelope Models?, James I. Watling, Stephanie S. Romanach, David N. Bucklin, Carolina Speroterra, Laura A. Brandt, Leonard G. Pearlstine, Frank J. Mazzotti

United States Geological Survey: Staff Publications

Climate envelope models are widely used to forecast potential effects of climate change on species distributions. A key issue in climate envelope modeling is the selection of predictor variables that most directly influence species. To determine whether model performance and spatial predictions were related to the selection of predictor variables, we compared models using bioclimate variables with models constructed from monthly climate data for twelve terrestrial vertebrate species in the southeastern USA using two different algorithms (random forests or generalized linear models), and two model selection techniques (using uncorrelated predictors or a subset of user-defined biologically relevant predictor variables). There …

Global Air Temperature Variability Independent Of Sea-Surface Temperature Influences, Andrew C. Comrie, Gregory J. Mccabe

United States Geological Survey: Staff Publications

Mean global surface air temperature (SAT) and sea surface temperature (SST) display substantial variability on timescales ranging from annual to multi-decadal. We review the key recent literature on connections between global SAT and SST variability. Although individual ocean influences on SAT have been recognized, the combined contributions of worldwide SST variability on the global SAT signal have not been clearly identified in observed data.Weanalyze these relations using principal components of detrended SST, and find that removing the underlying combined annual, decadal, and multi-decadal SST variability from the SAT time series reveals a nearly monotonic global warming trend in SAT since …

Gonadal Abnormalities In Frogs (Lithobates Spp.) Collected From Managed Wetlands In An Agricultural Region Of Nebraska, Usa, Diana M. Papoulias, Matt S. Schwarz, Lourdes Mena

United States Geological Survey: Staff Publications

Nebraska’s Rainwater Basin (RWB) provides important wetland habitat for North American migratory birds. Concern exists that pesticide and nutrient runoff from surrounding row-crops enters wetlands degrading water quality and adversely affecting birds and wildlife. Frogs may be especially vulnerable. Plains leopard (Lithobates blairi) metamorphs from RWB wetlands with varying concentrations of pesticides were evaluated for a suite of biomarkers of exposure to endocrine active chemicals. Froglets had ovarian dysgenesis, high rates of testicular oocytes, and female-biased sex ratios however, there was no clear statistical association between pesticide concentrations and biomarkers. Data interpretation was hindered because timing and duration …

History And Evaluation Of National-Scale Geochemical Data Sets For The United States, David B. Smith, Steven M. Smith, John D. Horton

United States Geological Survey: Staff Publications

Six national-scale, or near national-scale, geochemical data sets for soils or stream sediments exist for the United States. The earliest of these, here termed the ‘Shacklette’ data set, was generated by a U.S. Geological Survey (USGS) project conducted from 1961 to 1975. This project used soil collected from a depth of about 20 cm as the sampling medium at 1323 sites throughout the conterminous U.S. The National Uranium Resource Evaluation Hydrogeochemical and Stream Sediment Reconnaissance (NUREHSSR) Program of the U.S. Department of Energy was conducted from 1975 to 1984 and collected either stream sediments, lake sediments, or soils at more …

Remote Sensing Of Evapotranspiration For Operational Drought Monitoring Using Principles Of Water And Energy Balance, Gabriel B. Senay, Stefanie Bohms, James P. Verdin

United States Geological Survey: Staff Publications

Evapotranspiration (ET) is an important component of the hydrologic budget because it reflects the exchange of mass and energy between the soil–water–vegetation system and the atmosphere. Prevailing weather conditions influence potential or reference ET through variables such as radiation, temperature, wind, and relativity humidity. In addition to these weather variables, actual ET (ET_a) is also affected by land cover type and condition, as well as soil moisture. The dependence of ET_a on land cover and soil moisture, and its direct relationship with carbon dioxide assimilation in plants, makes it an important variable for monitoring drought, crop yield, …

Development And Application Of Methods Used To Source Prehistoric Southwestern Maize: A Review, Larry Benson

United States Geological Survey: Staff Publications

Archaeological cobs free of mineral contaminants should be used to source the soils in which they were grown. Mineral contaminants often contain much higher concentrations of metals than vegetal materials and can alter a cob’s apparent metal and heavy-isotope content. Cleaning a cob via immersion in an acid solution for more than a few minutes will result in the incongruent and sometimes complete leaching of metals, including strontium (Sr), from the cob. When using ⁸⁷Sr/⁸⁶Sr to determine the location of potential agriculture fields, it is best to either integrate several depth-integrated soil samples or to integrate several …

On Thinning Of Chains In Mcmc, William A. Link, Mitchell J. Eaton

United States Geological Survey: Staff Publications

1. Markov chain Monte Carlo (MCMC) is a simulation technique that has revolutionised the analysis of ecological data, allowing the fitting of complex models in a Bayesian framework. Since 2001, there have been nearly 200 papers using MCMC in publications of the Ecological Society of America and the British Ecological Society, including more than 75 in the journal Ecology and 35 in the Journal of Applied Ecology.

2. We have noted that many authors routinely ‘thin’ their simulations, discarding all but every kth sampled value; of the studies we surveyed with details on MCMC implementation, 40% reported thinning.

3. Thinning …

Spatially Explicit Models For Inference About Density In Unmarked Or Partially Marked Populations, Richard B. Chandler, J. Andrew Royle

United States Geological Survey: Staff Publications

Recently developed spatial capture-recapture (SCR) models represent a major advance over traditional capture-recapture (CR) models because they yield explicit estimates of animal density instead of population size within an unknown area. Futhermore, unlike nonspatial CR methods, SCR models account for heterogeneity in capture probability arising from the juxtaposition of animal activity centers and sample locations. Although the utility of SCR methods is gaining recognition, the requirement that all individuals can be uniquely identified exludes their use in many contexts. In this paper, we develop models for situations in which individual recognition is not possible, thereby allowing SCR concepts to be …

On Thinning Of Chains In Mcmc, William A. Link, Mitchell J. Eaton

United States Geological Survey: Staff Publications

1. Markov chain Monte Carlo (MCMC) is a simulation technique that has revolutionised the analysis of ecological data, allowing the fitting of complex models in a Bayesian framework. Since 2001, there have been nearly 200 papers using MCMC in publications of the Ecological Society of America and the British Ecological Society, including more than 75 in the journal Ecology and 35 in the Journal of Applied Ecology.

2. We have noted that many authors routinely ‘thin’ their simulations, discarding all but every kth sampled value; of the studies we surveyed with details on MCMC implementation, 40% reported thinning.

3. Thinning …

Sea-Level History During The Last Interglacial Complex On San Nicolas Island, California: Implications For Glacial Isostatic Adjustment Processes, Paleozoogeography And Tectonics, Daniel R. Muhs, Kathleen R. Simmons, R. Randall Schumann, Lindsey T. Groves, Jerry X. Mitrovica, Deanna Laurel

United States Geological Survey: Staff Publications

San Nicolas Island, California has one of the best records of fossiliferous Quaternary marine terraces in North America, with at least fourteen terraces rising to an elevation of ~270 m above present-day sea level. In our studies of the lowest terraces, we identified platforms at 38–36 m (terrace 2a), 33–28 m (terrace 2b), and 13–8 m (terrace 1). Uranium-series dating of solitary corals from these terraces yields three clusters of ages: ~120 ka on terrace 2a (marine isotope stage [MIS] 5.5), ~120 and ~100 ka on terrace 2b (MIS 5.5 and 5.3), and ~80 ka (MIS 5.1) on terrace 1.We …

Tectonic Influences On The Preservation Of Marine Terraces: Old And New Evidence From Santa Catalina Island, California, R. Randall Schumann, Scott A. Minor, Daniel R. Muhs, Lindsey T. Groves, John P. Mcgeehan

United States Geological Survey: Staff Publications

The California Channel Islands contain some of the best geologic records of past climate and sea-level changes, recorded in uplifted, fossil-bearing marine terrace deposits. Among the eight California Channel Islands and the nearby Palos Verdes Hills, only Santa Catalina Island does not exhibit prominent emergent marine terraces, though the same terrace-forming processes that acted on the other Channel Islands must also have occurred on Santa Catalina. We re-evaluated previous researchers' field evidence and examined new topographic, bathymetric, and stream-profile data in order to find possible explanations for the lack of obvious marine terrace landforms or deposits on the island today. …

Ensemble Forecast Spread Induced By Soil Moisture Changes Over Mid-South And Neighbouring Midwestern Region Of The Usa, Arturo I. Quintanar, Rezaul Mahmood

School of Natural Resources: Faculty Publications

This study investigated the potential impact of soil moisture perturbations on the statistical spread of an ensemble forecast for three different synoptic events during the summer of 2006. Soil moisture was perturbed from a control simulation to generate a 12 member ensemble with six drier and six moister soils. The impacts on the near-surface atmospheric conditions and on precipitation were analysed. It was found, as previous studies have confirmed, that soil moisture can change the spatial and temporal distribution of precipitation and of the overlying circulation. It was found that regardless of the conditions in synoptic forcing, temperature, relative humidity …

Adaptive Management Of Bull Trout Populations In The Lemhi Basin, Andrew J. Tyre, James T. Peterson, Sarah J. Converse, Tiffany Bogich, Damien Miller, Max Post Van Der Burg, Carmen Thomas, Ralph Thompson, Jeri Wood, Donna C. Brewer, Michael C. Runge

School of Natural Resources: Faculty Publications

The bull trout Salvelinus confluentus, a stream-living salmonid distributed in drainages of the northwestern United States, is listed as threatened under the Endangered Species Act because of rangewide declines. One proposed recovery action is the reconnection of tributaries in the Lemhi Basin. Past water use policies in this core area disconnected headwater spawning sites from downstream habitat and have led to the loss of migratory life history forms. We developed an adaptive management framework to analyze which types of streams should be prioritized for reconnection under a proposed Habitat Conservation Plan. We developed a Stochastic Dynamic Program that identified optimal …

Characterizing The Performance Of Ecosystem Models Across Time Scales: A Spectral Analysis Of The North American Carbon Program Site-Level Synthesis, Michael C. Dietze, Rodrigo Vargas, Andrew D. Richardson, Paul C. Stoy, Alan G. Barr, Ryan S. Anderson, M. Altaf Arain, Ian T. Baker, T. Andrew Black, Jing M. Chen, Philippe Ciais, Lawrence B. Flanagan, Christopher M. Gough, Robert F. Grant, David Hollinger, R. Cesar Izaurralde, Christopher J. Kucharik, Peter Lafleur, Shugang Liu, Erandathie Lokupitiya, Yiqi Luo, J. William Munger, Changhui Peng, Benjamin Poulter, David T. Price, Daniel M. Ricciuto, William J. Riley, Alok Kumar Sahoo, Kevin Schaefer, Andrew E. Suyker, Hanqin Tian, Christina Tonitto, Hans Verbeeck, Shashi B. Verma, Weifeng Wang, Ensheng Weng

School of Natural Resources: Faculty Publications

Ecosystem models are important tools for diagnosing the carbon cycle and projecting its behavior across space and time. Despite the fact that ecosystems respond to drivers at multiple time scales, most assessments of model performance do not discriminate different time scales. Spectral methods, such as wavelet analyses, present an alternative approach that enables the identification of the dominant time scales contributing to model performance in the frequency domain. In this study we used wavelet analyses to synthesize the performance of 21 ecosystem models at 9 eddy covariance towers as part of the North American Carbon Program’s site-level intercomparison. This study …

Heritable Choice Of Colony Size In Cliff Swallows: Does Experience Trump Genetics In Older Birds?, Erin A. Roche, Charles R. Brown, Mary Bomberger Brown

School of Natural Resources: Faculty Publications

The variation in breeding colony size seen in populations of most colonial birds may reflect heritable choices made by individuals that are phenotypically specialized for particular social environments. Although a few studies have reported evidence for genetically based choice of group sizes in birds, we know relatively little about the extent to which animals potentially rely on experience versus innate preferences in deciding how many conspecifics to settle with at different times of their lives. We conducted a cross-fostering experiment in 1997–1998 on cliff swallows, Petrochelidon pyrrhonota, in southwestern Nebraska, USA, in which some individuals were reared in colonies …

A Gis Approach For Estimating Optimal Sites For Grid-Connected Photovoltaic (Pv) Cells In Nebraska, Tomotoshi Funabashi

Department of Environmental Studies: Undergraduate Student Theses

In the context of rising energy concerns and increased spotlight on solar energy, this study examines and draws attention to the state of mid potential sunlight. The purpose of this study is to estimate the optimal sites for grid-connected photovoltaic cells in Nebraska, which is ranked 13th nationally in terms of insolation potential. Five factors – insolation potential, adjacency to roads, accessibility to grid, topography, and acreage – are examined with the use of Geographic Information System (GIS). Insolation potential was quantitatively analyzed by averaging, plotting, and interpolating the 20 years of datasets recoded at 28 weather stations of High …