Other Environmental Sciences Commons^™

Harmful Algal Blooms Threaten The Health Of Peri-Urban Fisher Communities: A Case Study In Kisumu Bay, Lake Victoria, Kenya, Amber Roegner, Lewis Sitoki, Chelsea Weirich, Jessica Corman, Dickson Owage, Moses Umami, Ephraim Odada, Jared Miruka, Zachary Ogari, Woutrina Smith, Eliska Rejmankova, Todd R. Miller

School of Natural Resources: Faculty Publications

Available guidance to mitigate health risks from exposure to freshwater harmful algal blooms (HABs) is largely derived from temperate ecosystems. Yet in tropical ecosystems, HABs can occur year-round, and resource-dependent populations face multiple routes of exposure to toxic components. Along Winam Gulf, Lake Victoria, Kenya, fisher communities rely on lake water contaminated with microcystins (MCs) from HABs. In these peri-urban communities near Kisumu, we tested hypotheses that MCs exceed exposure guidelines across seasons, and persistent HABs present a chronic risk to fisher communities through ingestion with minimal water treatment and frequent, direct contact. We tested source waters at eleven communities …

Population Demographics, Distribution, And Environmental History Of Asian Carp In A Great Plains River, Jake Werner

School of Natural Resources: Dissertations, Theses, and Student Research

Silver Carp Hypophthalmichthys molitrix, Bighead Carp H. nobilis, and Black Carp Mylopharyngodon piceus, collectively known as Asian carp, are a group of invasive fishes in the U.S.A. that have garnered much attention over the last couple decades. Most research devoted to this group of fishes has been focused in the Mississippi River basin with little investigation in the Missouri River drainage, particularly in tributary systems. The Kansas River is a major tributary to the Missouri River that has multiple anthropogenic barriers creating varying levels of connectivity within the Kansas River itself, and with the Missouri River. Information …

Impacts Of Environmental Conditions On Fleas In Black-Tailed Prairie Dog Burrows, Julia E. Poje, Tonie Rocke, Michael D. Samuel

United States Geological Survey: Staff Publications

Sylvatic plague, caused by the bacterium Yersinia pestis and transmitted by fleas, occurs in prairie dogs of the western United States. Outbreaks can devastate prairie dog communities, often causing nearly 100% mortality. Three competent flea vectors, prairie dog specialists Oropsylla hirsuta and O. tuberculata, and generalist Pulex simulans, are found on prairie dogs and in their burrows. Fleas are affected by climate, which varies across the range of black-tailed prairie dogs (Cynomys ludovicianus), but these effects may be ameliorated somewhat due to the burrowing habits of prairie dogs. Our goal was to assess how temperature and precipitation …

Linking Mosquito Surveillance To Dengue Fever Through Bayesian Mechanistic Modeling, Clinton B. Leach, Jennifer A. Hoeting, Kim M. Pepin, Alvaro E. Eiras, Mevin B. Hooten, Colleen T. Webb

United States Department of Agriculture Wildlife Services: Staff Publications

Our ability to effectively prevent the transmission of the dengue virus through targeted control of its vector, Aedes aegypti, depends critically on our understanding of the link between mosquito abundance and human disease risk. Mosquito and clinical surveillance data are widely collected, but linking them requires a modeling framework that accounts for the complex non-linear mechanisms involved in transmission. Most critical are the bottleneck in transmission imposed by mosquito lifespan relative to the virus’ extrinsic incubation period, and the dynamics of human immunity. We developed a differential equation model of dengue transmission and embedded it in a Bayesian hierarchical …

Flowers Are Essential To Maintain High Beetle Diversity (Coleoptera) In A Neotropical Rainforest Canopy, Susan Kirmse, Caroline S. Chaboo

University of Nebraska State Museum: Staff and Affiliates, Publications

Many hypotheses have been proposed to explain the megadiversity of angiosperms and insects. Flowers and their pollinators represent the most common terrestrial mutualistic interaction today and this is thought to have driven the evolution of angiosperms and their visitors. Within the framework of that interaction, this paper develops and tests two new hypotheses: 1) megadiversity of canopy beetles in tropical rainforests is largely based on flower resources, and 2) the majority of adult canopy beetles are adapted to visit flowers. To test hypothesis 1, the beetle fauna associated with 23 canopy tree species (13 families, 45 individuals) in a 1.4 …

Assessing The Impact Of Land Use And Land Cover Data Representation On Weather Forecast Quality: A Case Study In Central Mexico, Rezaul Mahmood

School of Natural Resources: Faculty Publications

In atmospheric modeling, an accurate representation of land cover is required because such information impacts water and energy budgets and, consequently, the performance of models in simulating regional climate. This study analyzes the impact of the land cover data on an operational weather forecasting system using the Weather Research and Forecasting (WRF) model for central Mexico, with the aim of improving the quality of the operative forecast. Two experiments were conducted using different land cover datasets: a United States Geological Survey (USGS) map and an updated North American Land Change Monitoring System (NALCMS) map. The experiments were conducted as a …

The Role Of Eolian-Fluvial Interactions And Dune Dams In Landscape Change, Late Pleistocene-Holocene, Mojave Desert, Usa, Mark R. Sweeney, Eric V. Mcdonald, Lucas P. Chabela, Paul R. Hanson

School of Natural Resources: Faculty Publications

The formation of the Kelso Dunes in the eastern Mojave Desert, California, was a landscape-changing event triggered by an increase in sediment supply that followed the incision of Afton Canyon by the Mojave River ca. 25 ka. Eastward migration of sand dunes occurred along a well-defined eolian trans­port corridor. Dunes temporarily blocked washes resulting in substantial aggradation of eolian and fluvial sediments. Stratigraphic exposures reveal numerous fining-up sequences with interbedded eolian sands that provide evidence of dune dams and subsequent aggradation. Luminescence ages reveal that dune blocking and aggradation correspond to a regional pulse of alluvial fan sedimentation that occurred …

Spotted Owls And Forest Fire: Comment, Gavin M. Jones, R. J. Gutiérrez, William M. Block, Peter C. Carlson, Emily J. Comfort, Samuel A. Cushman, Raymond J. Davis, Stephanie A. Eyes, Alan B. Franklin, Joseph L. Ganey, Shaula Hedwall, John J. Keane, Rodd Kelsey, Damon B, Lesmeister, Malcolm P. North, Susan L. Roberts, Jeremy T. Rockweit, Jamie S. Sanderlin, Sarah C. Sawyer, Ben Solvesky, Douglas J. Tempel, Ho Yi Wan, A. Leroy Westerling, Gary C. White, M. Zachariah Peery

United States Department of Agriculture Wildlife Services: Staff Publications

Western North American forest ecosystems are experiencing rapid changes in disturbance regimes because of climate change and land use legacies (Littell et al. 2018). In many of these forests, the accumulation of surface and ladder fuels from a century of fire suppression, coupled with a warming and drying climate, has led to increases in the number of large fires (Westerling 2016) and the proportion of areas burning at higher severity (Safford and Stevens 2017, Singleton et al. 2018). While the annual area burned by fire is still below historical levels (Taylor et al. 2016), some forest types in the west …

Toward The Standardization Of Mesoscale Meteorological Networks, Christopher Fiebrich, Kevin Brinson, Rezaul Mahmood, Stuart Foster, Megan Schargorodski, Nathan L. Edwards, Christopher A. Redmond, Jennie R. Atkins, Jeffrey Andresen, Xiaomao Lin

School of Natural Resources: Faculty Publications

Although they share many common qualities in design and operation, mesonetworks across the United States were established independently and organically over the last several decades. In numerous instances, the unique ways each network matured and developed new protocols has led to important lessons learned. These experiences have been shared in informal ways among various network operators over the years to promote reliable operation. As existing networks begin to introduce new sensors and technologies, and as new networks come online, there is a common need for guidance on best practices. This paper aims to formally provide recommendations to improve and harmonize …

Significance Statements Communicate Our Science More Widely, Rezaul Mahmood

School of Natural Resources: Faculty Publications

The American Meteorological Society (AMS) mission statement specifically calls for advancing ‘‘the atmospheric and related sciences . . . for the benefit of society.’’ To further the goal of communicating the importance of the science in our journals more widely, AMS is encouraging the inclusion in submitted papers of a ‘‘significance statement,’’ written in plain language and aimed at an educated layperson without formal training or education in the atmospheric and related sciences. As of 6 November 2020, Earth Interactions authors now have the option to include a significance statement with their submitted papers. A significance statement is an explanation …

Data Availability Principles And Practice, Rezaul Mahmood, Joseph A. Santanello, Xiaoyang Zhang

School of Natural Resources: Faculty Publications

Science requires evidence. Making data available lets other scientists confirm results, uncover errors, or find new insights. Moreover, gathering data can be expensive and time consuming. Since the same data can be used for a range of purposes, making data available can be an efficient use of limited research resources. Doing so can also improve traceability and, thus, accountability, when it comes to research findings. These reasons and more lie behind recent efforts to promote data availability. The American Meteorological Society (AMS) recently updated its data policy guidelines (https://www.ametsoc.org/ index.cfm/ams/publications/ethical-guidelines-and-ams-policies/data-policy-and-guidelines/) to require, among other things, that papers in its journals …

Loci Associated With Antibody Response In Feral Swine (Sus Scrofa) Infected With Brucella Suis, Courtney F. Pierce, Vienna R. Brown, Steven C. Olsen, Paola Boggiatto, Kerri Pedersen, Ryan S. Miller, Scott E. Speidel, Timothy J. Smyser

United States Department of Agriculture Wildlife Services: Staff Publications

Feral swine (Sus scrofa) are a destructive invasive species widespread throughout the United States that disrupt ecosystems, damage crops, and carry pathogens of concern for the health of domestic stock and humans including Brucella suis—the causative organism for swine brucellosis. In domestic swine, brucellosis results in reproductive failure due to abortions and infertility. Contact with infected feral swine poses spillover risks to domestic pigs as well as humans, companion animals, wildlife, and other livestock. Genetic factors influence the outcome of infectious diseases; therefore, genome wide association studies (GWAS) of differential immune responses among feral swine can provide …

A Review Of Avian Influenza A Virus Associations In Synanthropic Birds, Susan A. Shriner, J. Jeffrey Root

United States Department of Agriculture Wildlife Services: Staff Publications

Avian influenza A viruses (IAV) have received significant attention due to the threat they pose to human, livestock, and wildlife health. In this review, we focus on what is known about IAV dynamics in less common avian species that may play a role in trafficking IAVs to poultry operations. Specifically, we focus on synanthropic bird species. Synanthropic species, otherwise known as peridomestic, are species that are ecologically associated with humans and anthropogenically modified landscapes, such as agricultural and urban areas. Aquatic birds such as waterfowl and shorebirds are the species most commonly associated with avian IAVs, and are generally considered …

Resource Selection At Homesites By Wolves And Eastern Coyotes In A Canis Hybrid Zone, Teresa Oliveira, John F. Benson, Connor Thompson, Brent R. Patterson

School of Natural Resources: Faculty Publications

We modeled resource selection by wolves (Canis spp.), eastern coyotes (C. latrans), and admixed canids during the pup-rearing season at den and rendezvous sites (collectively, homesites) within a largely unprotected landscape proposed as the recovery zone for federally and provincially threatened eastern wolves (C. lycaon) in Ontario, Canada. Overall, canids selected wetlands, while avoiding secondary roads and open-structure rock-grass habitat patches. Packs with greater wolf ancestry selected wetlands and tertiary roads more strongly, while avoiding mixed conifer-hardwood forests. Contrary to our prediction, canids with greater coyote ancestry did not establish homesites closer to roads, which likely mitigated their risk of …

Developing A Model Of Graduate Teaching Assistant Teacher Efficacy: How Do High And Low Teacher Efficacy Teaching Assistants Compare?, Cody R. Smith, Cesar Delgado

School of Natural Resources: Faculty Publications

Graduate teaching assistants (TAs) are often responsible for teaching introductory courses to undergraduate science, technology, engineering, and mathematics students. The TAs are usually novices at teaching, and an important factor in their resilience and persistence in the face of inevitable challenges is self-efficacy. Little is known about what affects TA teacher efficacy or whether and how high- and low-efficacy TAs differ in their development as teachers. Bridging these gaps in the literature will inform best practices in developing and implementing professional development (PD) for TAs. Using a mixed-methods sequential exploratory research design, this study found differences in high- and low-efficacy …

Implementation Of An Occupancy-Based Monitoring Protocol For A Widespread And Cryptic Species, The New England Cottontail (Sylvilagus Transitionalis), Colin P. Shea, Mitchell J. Eaton, Darryl I. Mackenzie

United States Geological Survey: Staff Publications

Context. Designing effective long-term monitoring strategies is essential for managing wildlife populations. Implementing a cost-effective, practical monitoring program is especially challenging for widespread but locally rare species. Early successional habitat preferred by the New England cottontail (NEC) has become increasingly rare and fragmented, resulting in substantial declines from their peak distribution in the mid-1900s. The introduction of a possible competitor species, the eastern cottontail (EC),may also have played a role. Uncertainty surrounding how these factors have contributed to NEC declines has complicated management and necessitated development of an appropriate monitoring framework to understand possible drivers of distribution and dynamics.

Aims. …

A Profile Shape Correction To Reduce The Vertical Sensitivity Of Cosmic-Ray Neutron Sensing Of Soil Moisture, Lena M. Scheiffele, Gabriele Baroni, Trenton E. Franz, Jannis Jakobi, Sascha E. Oswald

School of Natural Resources: Faculty Publications

n recent years, cosmic-ray neutron sensing (CRNS) has shown a large potential among proximal sensing techniques to monitor soil moisture noninvasively, with high frequency and a large support volume (radius up to 240 m and sensing depth up to 80 cm). This signal is, however, more sensitive to closer distances and shallower depths. Inherently, CRNS-derived soil moisture is a spatially weighted value, different from an average soil moisture as retrieved by a sensor network. In this study, we systematically test a new profile shape correction on CRNS-derived soil moisture, based on additional soil moisture profile measurements and vertical unweighting, which …

Tools, Techniques And Teamwork: Transferring New Technologies For Wildlife Management, Conservation And Economic Development, John Eisemann, Gail Keirn

United States Department of Agriculture Wildlife Services: Staff Publications

Did you ever wonder who invented radio telemetry? Or breakaway snares? What about the bird repellent methyl anthranilate or the livestock protection collar? These and many other tools used in wildlife damage management resulted from creative thinking by biologists, technicians, researchers and managers working to solve complex wildlife issues. Over the past 90 years, these “aha moments” within the U.S. Department of Agriculture’s Wildlife Services program have ranged from developing novel scare devices, traps and vaccines to exploiting an animal’s visual capabilities to stop unwanted behaviors. Once discovered, these unique ideas may lead to practical, feasible and cost-effective wildlife damage …

Droughtscape, Fall 2020, National Drought Mitigation Center

DroughtScape: Quarterly Newsletter of the National Drought Mitigation Center (2007–2023)

DroughtScape, Fall 2020

Instability Of Glucocorticoid Metabolites In Coyote Scats: Implications For Field Sampling, Erika T. Stevenson, Eric M. Gese, Lorin A. Neuman-Lee, Susannah S. French

United States Department of Agriculture Wildlife Services: Staff Publications

Studying physiologic stress responses can assist in understanding the welfare of animals. One method of measuring the physiologic stress response is evaluating concentrations of glucocorticoid metabolites in feces. Previously, using an adrenocorticotropic hormone challenge, we found fecal glucocorticoid metabolite levels were a reliable indicator of physiologic stress response in coyotes (Canis latrans). We determine whether glucocorticoid metabolite concentrations remain stable when collecting feces over a 2-week period, a timeframe commonly used in scat surveys for wild canids. We collected feces from 6 captive coyotes maintained at the U.S. Department of Agriculture, Wildlife Services, National Wildlife Research Center, Predator …

Repetitive Sampling And Control Threshold Improve 16s Rrna Gene Sequencing Results From Produced Waters Associated With Hydraulically Fractured Shale, Jenna L. Shelton, Elliott P. Barnhart, Leslie Ruppert, Aaron M. Jubb, Madalyn S. Blondes, Christina A. Devera

United States Geological Survey: Staff Publications

Sequencing microbial DNA from deep subsurface environments is complicated by a number of issues ranging from contamination to non-reproducible results. Many samples obtained from these environments – which are of great interest due to the potential to stimulate microbial methane generation – contain low biomass. Therefore, samples from these environments are difficult to study as sequencing results can be easily impacted by contamination. In this case, the low amount of sample biomass may be effectively swamped by the contaminating DNA and generate misleading results. Additionally, performing field work in these environments can be difficult, as researchers generally have limited access …

Effects Of Riparian Deforestation On Benthic Invertebrate Community And Leaf Processing In Atlantic Forest Streams, Monalisa Silva-Araujo, Eduardo F. Silva-Junior, Vinicius Neres-Lima, Rafael Feijo-Lima, Flavia Tromboni, Christine Lourenco-Amorim, Steven A. Thomas, Timothy P. Moulton

School of Natural Resources: Faculty Publications

Riparian deforestation may strongly affect stream functioning, with consequences for biodiversity and ecosystem services. These effects can be assessed using bioindicators relating to biotic community structure and ecosystem functioning. We evaluated the effects of riparian deforestation on 1. measures of community structure using aquatic benthic invertebrates, and 2. an aspect of ecosystem functioning, aquatic leaf processing. We selected sites along gradients of riparian land use in four Atlantic rainforest streams and measured physical and chemical properties for their association with riparian deforestation. We sampled benthic invertebrates and calculated metrics of community structure at each site. We measured rates of leaf …

Dynamic Scaling Of The Generalized Complementary Relationship (Gcr) Improves Long-Term Tendency Estimates In Land Evaporation, Jozsef Szilagyi, Richard Crago, Ning Ma

School of Natural Resources: Faculty Publications

Most large-scale evapotranspiration (ET) estimation methods require detailed information of land use, land cover, and/or soil type on top of various atmospheric measurements. The complementary relationship of evaporation (CR) takes advantage of the inherent dynamic feedback mechanisms found in the soil−vegetation−atmosphere interface for its estimation of ET rates without the need of such biogeophysical data. ET estimates over the conterminous United States by a new, globally calibrated, static scaling (GCR-stat) of the generalized complementary relationship (GCR) of evaporation were compared to similar estimates of an existing, calibration-free version (GCR-dyn) of the GCR that employs a temporally varying dynamic scaling. Simplified …

Agate Fossil Beds National Monument, Paleontological Resources Management Plan (Public Version), Scott Kottkamp, Vincent L. Santucci, Justin S. Tweet, Jessica De Smet, Ellen Stark

United States National Park Service: Publications

Executive Summary

Since Agate Springs Ranch was founded by James H. Cook in 1887, exquisite examples of transitional Miocene mammalian fauna have been found along this stretch of the Niobrara River valley. Collectively these paleontological discoveries, along with the existing archeological and historical Native American collection, were the basis for establishing Agate Fossil Beds National Monument (AGFO) as a unit of the National Park System (NPS). The fossil remains from the Harrison and Anderson Ranch formations span a short, but important, time period within the Miocene Epoch. AGFO has provided science with an intimate look into North American mammalian evolution …

Resilience Characteristics Of The Urban Agriculture System In Lansing, Michigan: Importance Of Support Actors In Local Food Systems, Caitlin K. Kirby, Lissy Goralnik, Jennifer Hodbod, Zach Piso, Julie C. Libarkin

School of Natural Resources: Faculty Publications

Urban agriculture is a growing movement in cities across the United States, including the post-industrial Midwest. Maintaining a resilient local food system is a challenge given the environmental, resource, and institutional barriers facing urban farmers. In this descriptive correlational study, we take an in-depth look at the demographics, farm characteristics, motivations, barriers, and resilience indicators of individuals in the urban agriculture system in Lansing, Michigan, a city of the US Midwest with a growing urban agriculture system. Survey responses (n = 92) revealed that support actors, community gardeners, and farmers have descriptive differences in their motivations, with support actors (e.g. …

Evaluating Airsoft Electric Guns For Control Of Invasive Brown Treesnakes, Adam J. Knox, Björn Lardner, Amy Yackel Adams, Robert N. Reed

United States Geological Survey: Staff Publications

Firearms are often used in lethal control of invasive vertebrates, but safety and regulatory aspects limit the circumstances under which they can be used. During August 2016 at the Brown Treesnake Project laboratory on Guam, we evaluated hobby‐grade Airsoft Electric Guns (AEGs; a lower powered, less‐hazardous, and less‐regulated alternative to firearms) for capture and control of small animals, with specific emphasis on invasive brown treesnakes (Boiga irregularis). Tests of AEGs differing in power with ammunition (plastic pellets) masses ranging from 0.20 to 0.39 g, fired at gelatin blocks from distances of 4, 8, and 12 m, showed that …

Vampire Bats: Preparing For Range Expansion Into The U.S., Michael J. Bodenchuk, David L. Bergman

United States Department of Agriculture Wildlife Services: Staff Publications

The common vampire bat apparently is expanding its range northwards in Mexico and seems poised to enter the southern United States. Climate models predict suitable habitat in the U.S. in south Texas and parts of southern Arizona. While vampire bats’ northward range expansion is not unexpected, the fact that this species brings a strain of rabies that impacts livestock and people warrants a strategic response. Annual economic damages from bats are estimated between $7M and $9M, largely associated with deaths of livestock from rabies. To prepare for the emerging rabies issue, USDA Wildlife Services programs in Texas and Arizona have …

Growing Season Air Mass Equivalent Temperature (TE) In The East Central Usa, Dolly Na-Yemeh, Rezaul Mahmood, Gregory Goodrich, Keri Younger, Kevin Cary, Joshua D. Durkee

School of Natural Resources: Faculty Publications

Equivalent temperature (T_E), which incorporates both dry (surface air temperature, T) and moist heat content associated with atmospheric moisture, is a better indicator of overall atmospheric heat content compared to T alone. This paper investigates the impacts of different types of air masses on T_E during the growing season (April–September). The study used data from the Kentucky Mesonet for this purpose. The growing season was divided into early (April–May), mid (June–July), and late (August–September). Analysis suggests that T_E for moist tropical (MT) air mass was as high as 61 and 81 °C for the early and …

Connections Between The Hydrological Cycle And Crop Yield In The Rainfed U.S. Corn Belt, Wang Zhou, Kaiyu Guan, Bin Peng, Jiancheng Shi, Chongya Jiang, Brian Wardlow, Ming Pan, John S. Kimball, Trenton Franz, Pierre Gentine, Mingzhu He, Jingwen Zhang

School of Natural Resources: Faculty Publications

No abstract provided.

Nitrate Dynamics And Source Within Nested Watersheds Of An Agricultural Stream, Nebraska, Usa, Galen Richards

School of Natural Resources: Dissertations, Theses, and Student Research

Nitrate concentrations have been increasing throughout the globe, primarily due to heightened agricultural activity. Nitrate concentrations in Bazile Creek, located in Northeastern Nebraska, have been steadily rising since the early 2000s. Groundwater nitrate concentrations within the Bazile Creek watershed are high (> 10 mg/L nitrate-N), and there is strong connectivity between groundwater and surface water systems. This study aimed to better understand temporal nitrate concentration variability within the watershed through sampling tributaries and the main channel during baseflow conditions. Nitrate source was also investigated though the use of dual δ¹⁵N and δ¹⁸O nitrate isotopes, with samples …