Natural Resources and Conservation Commons^™

Bibliography Of Assorted Institute Of Agriculture And Natural Resources Publications

School of Natural Resources: Faculty Publications

No abstract provided.

Transmission Dynamics Of Toxoplasma Gondii In Arctic Foxes (Vulpes Lagopus): A Long-Term Mark-Recapture Serologic Study At Karrak Lake, Nunavut, Canada, Emilie Bouchard, Stacey A. Elmore, Ray T. Alisauskas, Gustaf Samelius, Alvin A. Gajadhar, Keaton Schmidt, Sasha Ross, Emily J. Jenkins

United States Department of Agriculture Wildlife Services: Staff Publications

Transmission dynamics of Toxoplasma gondii, a parasite of importance for wildlife and human health, are enigmatic in the Arctic tundra, where free-ranging wild and domestic felid definitive hosts are absent and rarely observed, respectively. Through a multiyear mark-recapture study (2011– 17), serosurveillance was conducted to investigate transmission of T. gondii in Arctic foxes (Vulpes lagopus) in the Karrak Lake region, Nunavut, Canada. Sera from adult foxes and fox pups were tested for antibodies to T. gondii by using serologic methods, including the indirect fluorescent antibody test, direct agglutination test, and modified agglutination test. The overall seroprevalence was 39% in adults …

Droughtscape, Fall 2019, Cory Matteson

DroughtScape: Quarterly Newsletter of the National Drought Mitigation Center (2007–2023)

Contents

From the Director

Quarterly drought summary

Quarterly drought impacts

Ranchers delayed response to drought

Drought Monitor celebrates 20 years

Drought Monitor state impact tables

Directorcontributesto U.N.droughtproject

Updated Drought Risk Atlas

New fact sheet lists recovery resources

Droughtscape, Summer 2019, Cory Matteson

DroughtScape: Quarterly Newsletter of the National Drought Mitigation Center (2007–2023)

Contents

From the Director

Quarterly drought summary

Quarterly drought impacts

NDMC welcomes African visitors

Ready for Drought game debuts

U.S. Virgin Islands added to USDM

Australian programmer visits NDMC

Upcoming events

Partnerships with NDMC extended

Relative Density And Resource Selection Of Urban Red Foxes In Lincoln, Nebraska, Kyle Dougherty

School of Natural Resources: Dissertations, Theses, and Student Research

Since early reports of urban red fox (Vulpes vulpes) populations in Great Britain, red fox populations have been studied in many large cities throughout Europe, North America, and Australia. However, there has been relatively little research conducted in moderately sized North American cities. To further the ecological understanding of red foxes in moderately sized cities, we investigated relative density and resource selection of the urban fox population in Lincoln, Nebraska. We used presence-only data collected from a citizen science project and inhomogeneous point process models to investigate relative density of urban foxes and deployed GPS collars on ten red …

Investigation Of Grace-Derived Information On Forest Drought Stress Across The Contiguous Us, Beichen Zhang

School of Natural Resources: Dissertations, Theses, and Student Research

This research derives z-score monthly groundwater storage (GWS) anomalies and z-score monthly root zone soil moisture (RZSM) anomalies from products of Gravity Recovery and Climate Experiment Data Assimilation (GRACE-DA). Z-score monthly GWS and RZSM anomalies are compared to two drought indicators: Standardized Precipitation Index (SPI) and Standardized Precipitation-Evapotranspiration Index (SPEI) to investigate the usefulness of GRACE-DA information to detect drought conditions at tree-ring sites. This study also compares z-score monthly GWS and RZSM anomalies with the Tree Ring Standardized Growth Index (TRSGI) that is resampled by bootstrapping to investigate the capability of monitoring forest drought stress. Finally, this research uses …

Not All Surveillance Data Are Created Equal—A Multi‐Method Dynamic Occupancy Approach To Determine Rabies Elimination From Wildlife, Amy J. Davis, Jordona D. Kirby, Richard B. Chipman, Kathleen M. Nelson, Tatiana Xifara, Colleen T. Webb, Ryan Wallace, Amy T. Gilbert, Kim M. Pepin

United States Department of Agriculture Wildlife Services: Staff Publications

1. A necessary component of elimination programmes for wildlife disease is effective surveillance. The ability to distinguish between disease freedom and non‐detection can mean the difference between a successful elimination campaign and new epizootics. Understanding the contribution of different surveillance methods helps to optimize and better allocate effort and develop more effective surveillance programmes.

2. We evaluated the probability of rabies virus elimination (disease freedom) in an enzootic area with active management using dynamic occupancy modelling of 10 years of raccoon rabies virus (RABV) surveillance data (2006–2015) collected from three states in the eastern United States. We estimated detection probability …

Survival, Fidelity, And Dispersal Of Double-Crested Cormorants On Two Lake Michigan Islands, Christopher R. Ayers, Katie C. Hanson-Dorr, Ken Stromborg, Todd W. Arnold, Jacob S. Ivan, Brian S. Dorr

United States Department of Agriculture Wildlife Services: Staff Publications

Colony fidelity and dispersal can have important consequences on the population dynamics of colonial-nesting birds. We studied survival and inter-colony movements of Double-crested Cormorants (Phalacrocorax auritus; cormorants) nesting at Spider and Pilot islands, located 9 km apart in western Lake Michigan, during 2008–2014. We used live resighting and dead recovery data from both colonies, plus dead recoveries from throughout North America, in a multistate live and dead encounter model to estimate annual survival, inter-colony movements, plus temporary and permanent emigration to unmonitored sites. Annual survival averaged 0.37 (annual process variation, ˆ = 0.07) for hatch-year, 0.78 (ˆ= 0.08) for secondyear, …

The Long Winter Of 1880-1881, Barbara Mayes Boustead, Martha Shulski, Steven D. Hilberg

School of Natural Resources: Faculty Publications

The story of the winter of 1880-1881 in the central United States has been retold in historical fiction, including Laura Ingalls Wilder’s The Long Winter, as well as in local histories and folklore. What story does the meteorological data tell, and how does it measure up when compared to the fiction and folklore? What were the contributing factors to the severity of the Long Winter, and has it been or could it be repeated? Examining historical and meteorological data, reconstructions, and reanalysis, including the Accumulated Winter Season Severity Index, the Long Winter emerges as one of the most severe since …

Use Of Unmanned Aircraft Systems (Uas) And Multispectral Imagery For Quantifying Agricultural Areas Damaged By Wild Pigs, Justin W. Fischer, Kelsey Greiner, Mark W. Lutman, Bryson L. Webber, Kurt C. Vercauteren

United States Department of Agriculture Wildlife Services: Staff Publications

Wild pigs (Sus scrofa) cause extensive damage to agricultural crops, resulting in lost production and income. A major challenge associated with assessing damage to crops is locating and quantifying damaged areas within agricultural fields. We evaluated a novel method using multispectral high-resolution aerial imagery, collected from sensors mounted on unmanned aircraft systems (UAS), and feature extraction techniques to detect and map areas of corn fields damaged by wild pigs in southern Missouri, USA. Damaged areas were extracted from orthomosaics using visible and near-infrared band combinations, an object-based classification approach, and hierarchical learning cycles. To validate estimates we also collected ground …

Confronting Models With Data: The Challenges Of Estimating Disease Spillover, Paul C. Cross, Diann J. Prosser, Andrew M. Ramey, Ephraim M. Hanks, Kim M. Pepin

United States Department of Agriculture Wildlife Services: Staff Publications

For pathogens known to transmit across host species, strategic investment in disease control requires knowledge about where and when spillover transmission is likely. One approach to estimating spillover is to directly correlate observed spillover events with covariates. An alternative is to mechanistically combine information on host density, distribution and pathogen prevalence to predict where and when spillover events are expected to occur. We use several case studies at the wildlife–livestock disease interface to highlight the challenges, and potential solutions, to estimating spatiotemporal variation in spillover risk. Datasets on multiple host species often do not align in space, time or resolution, …

Landscape Edges Shape Dispersal And Population Structure Of A Migratory Fish, Mark A. Kaemingk, S. E. Swearer, S. J. Bury, J. S. Shima

Nebraska Cooperative Fish and Wildlife Research Unit: Staff Publications

Many freshwater organisms have a life-history stage that can disperse through seawater. This has obvious benefits for colonization and connectivity of fragmented sub-populations, but requires a physiologically challenging migration across a salinity boundary. We consider the role of landscape boundaries between freshwater and seawater habitats, and evaluate their potential effects on traits and developmental histories of larvae and juveniles (i.e., dispersing life-history stages) of an amphidromous fish, Galaxias maculatus. We sampled juvenile fish on their return to 20 rivers in New Zealand: 10 rivers had abrupt transitions to the sea (i.e., emptying to an open coastline); these were paired …

Typha (Cattail) Invasion In North American Wetlands: Biology, Regional Problems, Impacts, Ecosystem Services, And Management, Sheel Bansal, Shane C. Lishawa, Sue Newman, Brian A. Tangen, Douglas Wilcox, Dennis Albert, Michael J. Anteau, Michael J. Chimney, Ryann L. Cressey, Edward Dekeyser, Kenneth J. Elgersma, Sarah A. Finkelstein, Joanna Freeland, Richard Grosshans, Page E. Klug, Daniel J. Larkin, Beth A. Lawrence, George Linz, Joy Marburger, Gregory Noe, Clint Otto, Nicholas Reo, Jennifer Richards, Curtis Richardson, Leroy Rodgers, Amy J. Schrank, Dan Svedarsky, Steven Travis, Nancy Tuchman, Lisamarie Windham-Myers

United States Department of Agriculture Wildlife Services: Staff Publications

Typha is an iconic wetland plant found worldwide. Hybridization and anthropogenic disturbances have resulted in large increases in Typha abundance in wetland ecosystems throughout North America at a cost to native floral and faunal biodiversity. As demonstrated by three regional case studies, Typha is capable of rapidly colonizing habitats and forming monodominant vegetation stands due to traits such as robust size, rapid growth rate, and rhizomatic expansion. Increased nutrient inputs into wetlands and altered hydrologic regimes are among the principal anthropogenic drivers of Typha invasion. Typha is associated with a wide range of negative ecological impacts to wetland and agricultural …

Sensitivity Analysis Of Aquifer Parameter Estimations Based On The Laplace Equation With Linearized Boundary Conditions, Jozsef Szilagyi

School of Natural Resources: Faculty Publications

No abstract provided.

A Crash In The Night, Mary Ann Steiner, Sam Taylor, Judy Diamond

Zea E-Books Collection

The illustrations in this book describe a wildlife encounter. Wild animals, like people, have challenges in life. They are adaptable and inventive, and they find new ways of solving problems to help them survive. As you turn the pages, describe what you see. How would you solve this wildlife challenge?

Mary Ann Steiner: Working on this story was exciting to me because I believe at any age, we can notice what is happening around us and make decisions to protect and enjoy nature! In this story, the kids see an exciting new character in the community. Once they figure out …

Extreme Site Fidelity As An Optimal Strategy In An Unpredictable And Homogeneous Environment, Brian D. Gerber, Mevin B. Hooten, Christopher P. Peck, Mindy B. Rice, James H. Gammonley, Anthony D. Apa, Amy J. Davis

United States Department of Agriculture Wildlife Services: Staff Publications

1. Animal site fidelity structures space use, population demography and ultimately gene flow. Understanding the adaptive selection for site fidelity patterns provides a mechanistic understanding to both spatial and population processes. This can be achieved by linking space use with environmental variability (spatial and temporal) and demographic parameters. However, rarely is the environmental context that drives the selection for site fidelity behaviour fully considered.

2. We use ecological theory to understand whether the spatial and temporal variability in breeding site quality can explain the site fidelity behaviour and demographic patterns of Gunnison sage‐grouse (Centrocercus minimus). We examined female site fidelity …

Quantitative Modelling Biology Undergraduate Assessment, Robert Mayes, Kent Rittschof, Joseph Dauer, Bryon Gallant

School of Natural Resources: Faculty Publications

The Quantitative Modelling Biology Undergraduate Assessment (QM BUGS Version II) assesses undergraduate biology students’ quantitative modelling abilities and confidence. The assessment is intended to be given in undergraduate biology courses where instructors are engaging students in quantitative modelling within biological contexts. The assessment consists of 36 questions: 25 multiple choice questions addressing four subcategories within quantitative modelling understanding (Quantitative Act, Quantitative Interpretation, Quantitative Modelling, and Meta-Modelling) and 11 Likert questions addressing student confidence about modelling in biology within the four subcategories. QM BUGS assessments were piloted in multiple undergraduate biology courses at both a research intensive university and regional university …

Extinction Vortex Dynamics Of Top Predators Isolated By Urbanization, John F. Benson, Peter J. Mahoney, T. Winston Vickers, Jeff A. Sikich, Paul Beier, Seth P.D. Riley, Holly B. Ernest, Walter M. Boyce

School of Natural Resources: Faculty Publications

Extinction risk is elevated in small, isolated populations due to demographic and genetic interactions. Therefore, it is critical to model these processes realistically in population viability analyses (PVA) to inform local management and contribute to a greater understanding of mechanisms within the extinction vortex. We conducted PVA’s for two small mountain lion populations isolated by urbanization in southern California to predict population growth, extinction probability, and loss of genetic diversity with empirical data. Specifically, we (1) provide the first PVA for isolated mountain lions in the Santa Ana Mountains (SAM) that considers both demographic and genetic risk factors and (2) …

The Adaptive Cycle: More Than A Metaphor, Shana M. Sundstrom, Craig R. Allen

School of Natural Resources: Faculty Publications

The adaptive cycle and its extension to panarchy (nested adaptive cycles) has been a useful metaphor and conceptual model for understanding long-term dynamics of change in ecological and social–ecological systems. We argue that adaptive cycles are ubiquitous in complex adaptive systems because they reflect endogenously generated dynamics as a result of processes of self-organization and evolution. We synthesize work from a wide array of fields to support this claim. If dynamics of growth, conservation, collapse and renewal are endogenous dynamics of complex adaptive systems, then there ought to be signals of system change over time that reflect this. We describe …

Drought Impacts And Management In Prairie And Sandhills State Parks, Theresa M. Jedd, Devarati Bhattacharya, Cara Pesek, Michael J. Hayes

School of Natural Resources: Faculty Publications

The combination of decreased water availability and increased temperatures can interfere with outdoor activities, particularly with surface water decline and the increased risk of wildfire. Drought is a longer-term climate trend, but there is a tendency toward short-term reactions only when a drought occurs. Policy mechanisms for drought, where present, are often left to managerial discretion because they are not needed every year, and lack specific indicators. Recreator choices contribute to adaptation and public lands managers also shape drought response by monitoring meteorological trends and managing resources wisely. Despite these trends, no singular recreational drought definition exists. To understand socio-environmental …

Review Of A Field Guide To The Natural World Of The Twin Cities By John J. Moriarty, Photography By Siah L. St. Clair, Douglas H. Johnson, Bonnie Sample

The Prairie Naturalist

A Field Guide to the Natural World of the Twin Cities has two foci: natural areas in the Twin Cities of Minnesota and the species that live in each. The geographical scope is the seven counties that envelop Minneapolis and Saint Paul. The author describes nine major habitat types that can be found there: prairie, savanna, big woods, oak woods, wetlands (marshes and swamps), fens and bogs, lakes, rivers, and urban and suburban. It is useful to know that “big woods” are not just woods that are large in extent, but woodlands that occur in Minnesota and western Wisconsin dominated …

Factors Affecting White Bass Abundance In Two Missouri River Reservoirs, William J. Radigan, Mark J. Fincel

The Prairie Naturalist

Annual angler harvest of white bass (Morone chrysops) increased from 1985–2005 in Lake Oahe and Lake Sharpe, two mainstem Missouri River reservoirs in South Dakota. In 2006, harvest rates dropped appreciably in both reservoirs and remained low through 2015. It is hypothesized that a confirmed 2005 columnaris disease outbreak led to reduced annual angler harvest of white bass from both reservoirs. Mean annual angler harvest prior to the outbreak (1985–2005) in Lake Oahe decreased 65% and in Lake Sharpe decreased 57% post outbreak (2006–2015). To assess potential causes of sustained decreased adult white bass abundance in the reservoirs, …

Review Of Gulls Simplified: A Comparative Approach To Identification By Pete Dunne And Kevin T. Karlson, Garrett J. Macdonald

The Prairie Naturalist

The title of Pete Dunne and Kevin Karlson’s new book, Gulls Simplified, may seem like an oxymoron to many birders. Gulls are, after all, one of the most vexing groups of North American birds due to their myriad identification challenges, and many seasoned birders simply “don’t do gulls.” Indeed, Dunne, in the first line of the Introduction (page 13), writes, “Ask any bird-watcher to name the bird group that is most intimidating, and to a man, woman, and tour leader they often shout: GULLS!” The genesis of the book, and the authors’ approach to identification within, arises from the notion …

Incidental Captures Of Plains Spotted Skunks In Central South Dakota, Samantha Fino, Joshua D. Stafford, Aaron T. Pearse, Jonathan A. Jenks

The Prairie Naturalist

The plains spotted skunk (Spilogale putorius interrupta) had a historically broad distribution in the central United States, extending from the Mississippi River west to the Rocky Mountains. This subspecies of the eastern spotted skunk (S. putorius) has experienced population declines in recent decades possibly due to habitat loss and reduction of prey through conversion of grasslands and forests to croplands, as well as reductions in abandoned buildings, fence rows, creek bottoms, and wood piles throughout the region (Crabb 1948, Kaplan and Mead 1991, Gompper and Hackett 2005, Sasse 2017). Woody debris provides access to prey, and …

Enhancing Rural Economies Through Agroforestry, Gary Bentrup, Dean Current, Christopher Hartley, Marlen Eve, Tricia Kovacs, Kate Mcfarland, Eric Norland, David Smith, Susan Stein, Richard Straight

United States Department of Agriculture, Forest Service / University of Nebraska-Lincoln: Faculty Publications

Executive Summary

Accelerating the adoption of agroforestry will require a better understanding of the economic opportunities and financial benefits to society, says a recent assessment of United States agroforestry.1 Providing this understanding is critical for agroforestry to reach its full potential, whereby it enhances rural economies and provides ecological services that people need, such as clean drinking water. To assess emerging opportunities, the United States Department of Agriculture (USDA) convened more than 60 people in March 2018 to learn, network, and, above all, generate ideas for raising the economic profile and viability of agroforestry in the United States.

The effort …

The Prairie Naturalist, Volume 51, No. 1

The Prairie Naturalist

1 EDITOR’S NOTE

RESEARCH ARTICLES

3 Factors Affecting White Bass Abundance in Two Missouri River Reservoirs, William J. Radigan and Mark J. Fincel

17 Suitability of single-pass backpack electrofishing to estimate fish abundance and describe assemblage structure in prairie streams, Morgan J. Kauth, David A. Schumann, Katie N. B. Graeb, and W. Wyatt Hoback

NOTES

25 Channel Catfish Reproductive Traits in the Lower Platte River, Nebraska, USA - Mackenzie Zwiener, Jonathan Spurgeon, & Mark Pegg

30 Quantifying Signpost Usage By Captive Male White-Tailed Deer - Cassie L. Auxt, Eric S. Michel, and Jonathan A. Jenks.

33 Incidental Captures of Plains …

Suitability Of Single-Pass Backpack Electrofishing To Estimate Fish Abundance And Describe Assemblage Structure In Prairie Streams, Morgan J. Kauth, David A. Schumann, Katie N.B. Graeb, William Wyatt Hoback

The Prairie Naturalist

Electrofishing is commonly used by fisheries professionals to assess fish assemblage structure and species abundance in streams. Accurate estimates of fish abundance and, consequently assemblage metrics, are typically generated with mark-recapture or maximum-likelihood depletion techniques, but doing so requires considerable sampling effort. Less intensive sampling approaches may be beneficial to fisheries managers, particularly in cases where frequent sampling of many streams is preferred. We used regression and Spearman rank-order correlation analyses to compare species catch rates and the assemblage metrics generated from single-pass electrofishing samples with multiple-pass depletion abundance estimates in Nebraska streams. We examined the influence of instream habitat …

Channel Catfish Reproductive Traits In The Lower Platte River, Nebraska, Usa, Mackenzie Zwiener, Jonathan J. Spurgeon, Mark Pegg

The Prairie Naturalist

Reproductive traits including fecundity, egg diameter, and condition of freshwater fishes influence offspring survival and abundance and may provide insight regarding timing of reproduction (Winemiller and Rose 1992, Johnston and Leggett 2002). Fish size (i.e., length or weight) may influence the number of eggs produced by an individual female (i.e., fecundity; Michaletz 1998). Larger individuals may, thus, disproportionately contribute to year-classes through increased fecundity if egg and larval survival is similar or greater than those from smaller reproductive females (Gwinn et al. 2015). Likewise, maternal fish size may influence egg diameter and offspring survival, whereby larger egg diameters are associated …

Analysing Habitat Connectivity And Home Ranges Of Bigmouth Buffalo And Channel Catfish Using A Large-Scale Acoustic Receiver Network, Eva C. Enders, Colin Charles, Douglas A. Watkinson, Colin Kovachik, Douglas R. Leroux, Henry Hansen, Mark Pegg

School of Natural Resources: Faculty Publications

The determination if fish movement of potadromous species is impeded in a river system is often difficult, particularly when timing and extent of movements are unknown. Furthermore, evaluating river connectivity poses additional challenges. Here, we used large-scale, long-term fish movement to study and identify anthropogenic barriers to movements in the Lake Winnipeg basin including the Red, Winnipeg, and Assiniboine rivers. In the frame of the project, 80 Bigmouth Buffalo (Ictiobus cyprinellus) and 161 Channel Catfish (Ictalurus punctatus) were tagged with acoustic transmitters. Individual fish were detected with an acoustic telemetry network. Movements were subsequently analyzed using a continuous-time Markov model …

River-Wide Habitat Availability For Fish Habitat Guilds: Implications For In-Stream Flow Protection, Jonathan Spurgeon, Mark A. Pegg, Piotr Parasiewicz, Joe Rogers

School of Natural Resources: Faculty Publications

The variation in river discharge alters habitat heterogeneity with implications for the distribution of fish species with different habitat requirements. Assessments of habitat availability following changes in river discharge are difficult to apply at broad spatial scales and with relevance to multiple species. We used a MesoHABSIM modeling approach to quantify river-wide changes in habitat availability for five fish habitat guilds under three river discharge levels along the Niobrara River, NE, USA.We used a time-series of river discharge (1958–2010) to create uniform continuous under-threshold habitat duration curves that identified habitat conditions that may result in periods of stress for fish …