Environmental Monitoring Commons^™

Early Successional Response To Stream Daylighting In Redwood National And State Parks, Orick, California, Rylee Rawson

Cal Poly Humboldt theses and projects

In-channel stream restoration projects can act as both disturbance and recovery mechanisms, disrupting existing conditions to reestablish the hydrologic and ecological processes that sustain stream ecosystems. These interventions initiate successional trajectories in which channel form and biological communities reorganize over time. In Redwood National and State Parks (California, USA), the Redwoods Rising initiative restores buried headwater channels by recontouring legacy logging roads and daylighting streams buried by Humboldt crossings. Using the National Park Service Klamath Network wadable stream monitoring protocol, I evaluated nine restored reaches spanning one to five years post-restoration, alongside old-growth reference reaches and available pre-treatment data. I …

Elucidating The Relationship Between Water Quality And Antibiotic Resistance Of Rainwater Microbes Across Western Humboldt County, Theo P. Murphy, Eve Wendley, Justice Laskowski, Tyler Paredes

Humboldt Journal of Microbiology

Limited studies have been conducted regarding the fecal contamination and microbial dispersal through rainwater, with no known studies investigating the potential connection between antibiotic resistant microbes and water quality in rainwater. This study seeks to identify the presence of a correlation between water quality and incidence of antibiotic resistance in rainwater microbes. We hypothesize that there will be a correlation between these two variables. We additionally anticipate a high incidence of fecal contamination across rural and urban collection sites alike, with fecal contamination being more prevalent in rural areas than urban locals. To determine water quality, we measured the concentration …

Investigating Woody Vegetation Recruitment Post Riparian Enhancement Extraction Along The Baduwa't, Rize Martins De Oliveira, Wiley Hughes, Owen Lenox

Forestry, Fire, & Rangeland Management Senior Capstones

The Baduwa’t River in Humboldt County, California, faces a legacy of channelization, poor land management, and severe flooding that has left high, dry floodplain terraces disconnected from the river and dominated by invasive vegetation. In response to sediment deficits during drought years, Riparian Enhancement Extractions (REEs) were introduced as an alternative gravel mining method that simultaneously presented opportunities for habitat restoration. This study evaluates five REEs along the Baduwa’t to identify the construction features and site conditions that promote successful riparian vegetation establishment. Findings show that REEs can create seasonal wetlands conducive to native riparian habitat reestablishment, when excavation is …

Assessing Understory Along The Elk River (Hikshari') In Headwaters Forest Reserve, Humboldt County, California, Julie R. Meyers, Aliyah M. Ingram, Caleb N. Larkin, Joshua L. Carpenter

Environmental Science & Management Senior Capstones

Northern California’s extensive logging history and lack of forest management has altered old-growth coast redwood (Sequoia sempervirens) forests, leaving dense, homogenous second and third-growth forest stands. This has led to the use of modern restoration techniques such as variable density thinning (VDT) which aims to rehabilitate old-growth forest conditions by improving stand heterogeneity and light availability for understory species. Our study was done in Headwaters Forest Reserve (HFR) along the Elk River (Hikshari’) Trail in Humboldt County, California. Initially, the project was supervised by the Bureau of Land Management (BLM) Arcata Field Office. However, the 2025 U.S. government …

Six Rivers National Forest Hazardous Fuels And Fire Management Project 2025 Orleans Complex Fire Effects From 9/13/25 - 9/14/25, James L. Parr, Nosheen Maung, Darby J. Lewis, Javier E. Margarito, Giancarlo Golloti

Environmental Science & Management Senior Capstones

The 2025 Orleans Complex affected the Klamath National Priority Landscape, designated by Congress as a priority to reduce fuel load and mitigate wildfire risk near rural, at-risk communities. To address the threat of large destructive wildfires, the 2023 Six Rivers Hazardous Fuels and Fire Management Project identified desired ecological conditions, using the right type of fire at the right time and place.

Ecocultural Monitoring And Erosion Mitigation In Powers Creek, A Baduwa’T Tributary, In Blue Lake, California, Sebastian Castillo, Lillyauna Perry, Daniel Price, Lokey Struve

Undergraduate Scholarship

Riparian areas are of great ecological and cultural importance. They provide a variety of ecosystem services, protecting water quality, minimizing climatological changes, and acting as valuable wildlife habitat. They are often also places of connection and access to resources for indigenous communities. Powers Creek, a tributary of the Baduwa’t, is one such place for the Blue Lake Rancheria tribal community. Through the utilization of the process based restoration methodology, our team was able to develop dynamic, place-based solutions for the environmental ails impacting Powers Creek. On-site vegetation and rock weirs were employed as low-tech bioengineering technologies in order to slow …

Eco-Cultural Restoration Of Mouralherwaqh: Site Description And Invasive Species Treatment Plan In King Salmon, California, Natalie Bridget Calderon, Myion Rickey, King Baptista, Owen Bardsley, Jillian Snowhook

Undergraduate Scholarship

In July of 2022, the Wiyot Tribe bought back one of their first pieces of ancestral forest within the Mouralherwaqh "more-RAH-share-wahg" village area (Wiyot, 2022). Before this repatriation, the Tribe owned less than 1% of their ancestral lands; after, the Tribe’s land holdings increased by 10% (Reclaiming Mouralherwaqh | Humboldt NOW | Cal Poly Humboldt, 2022). Mouralherwaqh is a 46 acre coastal site located near present day King Salmon, California and has high ecological and culturally significant values (Wiyot, 2022). Prior to the change of ownership, Mouralherwaqh was privately-owned and in 2014 underwent a clear-cut timber harvest within eight-acres of …

Influence Of Elevation On Plant Survivorship In Baduwa’T Estuary, Richard Louis Toledo Jr., Celine Aguilera, Rivé Prater, Claire Durbin

Undergraduate Scholarship

The Baduwa’t is a river in Humboldt County, California that has been adversely impacted by agricultural operations. Disturbances from agriculture have altered the surrounding ecosystems and hydrology of the river. The conservation stewardship group, California Trout, initiated a collaborative restoration project that created a new channel and off-channel pond to provide habitat for salmonids and other native fish in the estuary. As an extension of this project, sections of the site underwent revegetation efforts. The survivorship rates of this new vegetation were lower than anticipated and we were asked by California Trout to assess if the elevation on the site …

Riparian Revegetation: Re-Indigenizing The Powers Creek Tributary Of The Baduwa’T Watershed At Blue Lake Rancheria, California, Genesis Beltran, Ruben Lopez, Ben Stock

Undergraduate Scholarship

This project focuses on the ecological and cultural restoration of Powers Creek, a tributary of the Baduwa’t watershed at Blue Lake Rancheria, California. Riparian ecosystems play a critical role in biodiversity, water quality, and climate resilience, particularly for species like salmonids reliant on cold-water refugia. The restoration efforts, guided by Indigenous knowledge, addressed the removal of non-native competitive species such as Scotch broom (Cytisus scoparius) and French broom (Genista monspessulana) – which are shown to increase wildfire severity and challenge native plant communities – in addition to freeing established plantings of vegetative competition. Through collaborative planning …

Using Environmental Dna Methods For Estimating Juvenile Chinook Salmon Abundance, Jacqueline Marie Bridegum

Cal Poly Humboldt theses and projects

In the Central Valley of California, stocks of Chinook Salmon are declining, and two out of the four ecotypes of Chinook Salmon within the Sacramento River system are federally listed. A monitoring network has been developed to estimate the abundances of downstream migrating Chinook Salmon smolts, but there is high uncertainty in these estimates due to low catch rates. Environmental DNA (eDNA) monitoring, which involves capture of genetic material that organisms release into their surrounding environment, has shown promise for estimating abundance of salmonids and could complement existing monitoring efforts and potentially reduce uncertainty in abundance estimates. This research project …

Post Wildfire Vegetation Response To The Wildland-Urban Interface: A Case Study Of The Station Fire, Angelo C. De Guzman, Raju Bista, Parveen K. Chhetri

CSU Journal of Sustainability and Climate Change

In the past, wildfires served as a method for mother nature to promote biodiversity and to help maintain a functioning ecosystem. However, climate change alters the fire regime, significantly impacting vegetation recovery. Human disturbances and increased land use and land cover heighten vegetation disruption and abundance after a fire. Wildland-urban interface (WUI) – the region where the vegetation intermingles with the roads, houses, and human-made structures – threatens vegetation and the human population. Overall vegetation recovery after the Station Fire of 2009 spread through the San Gabriel Mountains, Los Angeles County was observed using Digital Elevation Model (DEM), Normalized Difference …

Evaluating Benthic Macroinvertebrate Populations In Response To Scouring Events In The Trinity River, Ca, Liam Hay, Michael W. O'Neil, Chloe Pieper-Wasem

Environmental Science & Management Senior Capstones

River systems across California have been impacted by appurtenant structures such as dams and diversions. These structures have had an adverse impact on Benthic invertebrate (BMI) communities by regulating river systems and changing the natural hydraulic pulses that follow seasonal precipitation. Benthic invertebrates are a critical food resource for salmonids and serve as an indicator of ecosystem health. Our study was interested in seeing the effects of scouring events on BMI in the Trinity River of Trinity County, C.A. Following a large precipitation event that occurred in the region in December 2022, an influx of water entered the river through …

Prevalence Of Hesperevax Sparsiflora Var. Brevifolia (Short-Leaved Evax) At Ocean Ranch, Humboldt County, California: Exploring The Effects Of Disturbance, Shelby Diquirco, Matthew Estrada, Alana T. Fraley, Alexander D. Smith

Environmental Science & Management Senior Capstones

The prevalence of special-status plants within a landscape can be an indicator of the ecological health of that site, and therefore inform restoration efforts and post-restoration monitoring. Hesperevax sparsiflora var. brevifolia (short-leaved evax) is a special status species found within the Ocean Ranch unit of Humboldt, California. A primary threat to native plant communities are invasive plant species. Coastal dune ecosystems are largely dominated by invasive species, including Ammophila arenaria (European beachgrass). To work towards the eradication of A. arenaria, the California Department of Fish and Wildlife utilized treatment combinations of herbicide and prescribed fire at Ocean Ranch in …

Monitoring Bull Kelp (Nereocystis Leutkeana) Remotely At High Resolutions, Hannah E. Joss

Cal Poly Humboldt theses and projects

Bull kelp (Nereocystis leutkeana) is a foundational seaweed in nearshore, marine systems, traditionally supporting economically important fisheries, extracting nutrients in its vicinity, and sequestering carbon and transporting it great distances to subsidize shallow and deep-sea environments. Bull kelp is also a culturally important species for some indigenous peoples along the northeastern Pacific coastline and provides a harvestable product with growing demand. Global trends in kelp distribution show patterns of decline, and the immense loss of northern California bull kelp forests in response to climatic changes have highlighted the need for alternative sources of kelp, both for the product …

Seasonal Growth, Movement, And Survival Of Juvenile Coho Salmon (Oncorhynchus Kisutch) Utilizing Restored Rearing Habitat, Monica S. Tonty

Cal Poly Humboldt theses and projects

The Scott River supports the most robust population of threatened Coho Salmon Oncorhynchus kisutch remaining in the Klamath River basin. Even in the Scott River, low quality and restricted extent of juvenile rearing habitat limits the Coho Salmon population to a small fraction of historic abundance. To support persistence and recovery of Scott River Coho Salmon, the Scott River Watershed Council (SRWC) has constructed a portfolio of restoration projects to improve juvenile rearing habitat, including beaver dam analogs (BDAs). The Scott River BDAs were the first implemented anywhere in California. This study compares juvenile Coho Salmon responses associated with production …

Treatment Plan And Educational Guide For Removing Invasive Barnyard Grass, Canada Thistle, And Cocklebur Within The Baduwa't (Mad River) Estuary, Ashley S. Turner, Alex D. Lallman

Undergraduate Scholarship

Our project is located at the Baduwa’t Estuary. We partnered with CalTrout to assist them with meeting one of the objectives for their Mad River (Baduwa’t) Estuary Floodplain Habitat and Public Access Enhancement Project. CalTrout partnered with the landowner, McKinleyville Community Services District, to restore 4.25 acres of the estuary. Our project focused on reducing the abundance of invasive plant species within the estuary area. The target plant species were barnyard grass, Canada thistle, and cocklebur. First, we conducted a literature review to learn the best management practices for eradicating the three target species. Then we conducted a field survey …

Comparing Fish Species Assemblage Between Impacted And Restored Estuarine Salt Marshes Within The Eel River Estuary, Humboldt Co. Ca, Adam Aguilar, Isaac Basham-Clair, Tristan F. Parkinson, Larkin C. Wells

Undergraduate Scholarship

This report details a study assessing the fish assemblages of a recently restored estuarine salt marsh site, and a similar unrestored and impacted site along the Eel River estuary. These two sites are located within the Eel River (Wiya’t) estuary, roughly 10 miles west of the city of Fortuna, CA. This study was conducted during the months of September through October 2023. Data collection was done through seine net dragging at randomly selected sample points across both sites. Seine net hauls were recorded by species and species count, which were later computed using a diversity index to provide values representative …

Analysis Of Benthic Macroinvertebrate Response To Restoration Flows And Scour In The Trinity River, Northern California, Sarah Gutierrez, Julie Avina

Undergraduate Scholarship

This study investigates the ecological impact of restoration flows and scouring events on benthic macroinvertebrate (BMI) communities within the Trinity River, an ecosystem historically impacted by anthropogenic activities. Central to this study is the examination of how hydrologic alterations, especially the construction of the Lewiston Dam, have influenced these vital ecological indicators. Using data collected earlier in 2023 from a current study by Benjamin King, we analyzed BMI samples from three river sites (Junction City, Pear Tree, and Lorenz Gulch), both prior to and following a major scouring event in January 2023. This paper utilizes statistical analyses, including ANOVA and …

Concentration Of Heavy Metals In Three Distinct Algae Families From Humboldt County, California, Kodiak E. Miller, Caleb J. Strait, Jacob I. Begorre, Brittney L. Mitchell, Claire P. Till

IdeaFest: Interdisciplinary Journal of Creative Works and Research from Cal Poly Humboldt

Anthropogenic impacts on marine environments can impact metal fluxes and concentrations available to marine species. Monitoring these impacts is necessary to better understand the interactions between the biotic and abiotic components of these ecosystems and mitigate the risk posed by harmful toxins introduced by human activities. Biomoniters, like macroscopic algae, are useful indicators that illuminate the bioaccumulation of toxins commonly introduced from anthropogenic activity. With this in mind, the concentrations of heavy metals zinc (Zn), nickel (Ni), and copper (Cu) were analyzed via the assessment of algae (Representatives from Ulva, Mastocarpus, Fucus) in two sites in Humboldt County: …

Comparing Molecular Methods To Estimate Fish Stomach Contents And Gastric Evacuation Rates: Implications For Measuring The Impacts Of Predation On Central Valley Chinook Salmon, Cory M. Dick

Cal Poly Humboldt theses and projects

Juvenile Chinook Salmon (Oncorhynchus tshawytscha) migrating through the Sacramento – San Joaquin Delta (the Delta) in central California have higher mortality rates than salmonids migrating through other west coast estuaries. Some hypotheses for high mortality rates include entrainment into water export facilities, physical alterations of the river system, and predation. Of these factors, predation is considered the least understood but may have the largest impact. Predation from large populations of non-native piscivorous fishes in the Delta is believed to effect abundances of Central Valley Chinook salmon, however sufficient data supporting this hypothesis is scarce. In this study, I …

Comparison Of Environmental Dna And Underwater Visual Count Surveys For Detecting Juvenile Coho Salmon (Oncorhynchus Kisutch) In Rivers, Jason T. Shaffer

Cal Poly Humboldt theses and projects

Environmental DNA (eDNA) has developed into a useful tool for determining the distribution of rare aquatic species, but relatively few studies have directly compared the detection probabilities of this method with other conventional survey techniques. These comparisons can inform which method may be better suited to address study objectives. In this study, the overall goal was to compare the ability of eDNA and underwater visual count (UVC) surveys to detect juvenile coho salmon (Oncorhynchus kisutch), a species of conservation concern at the southern extent of its geographic range. Specifically, I address two objectives: (1) compare the ability of …

A Clash Of Cultures: The Struggle Of Native Americans To Participate In Traditional Ecological Knowledge And Western Science Under California’S Marine Life Protection Act, John W. Corbett, Ruthie A. Maloney

IdeaFest: Interdisciplinary Journal of Creative Works and Research from Cal Poly Humboldt

This article comprehensively details the culture clash that took place between Native Americans, the North Group Science Panel, and the Science Advisory Team (SAT) involved in the Marine Life Protection Act (MLPA). In 1999, the California Legislature passed the Marine Life Protection Act to create a statewide, science-driven network of marine reserves along the 1,100 miles of the California coast. The MLPA was meant to protect marine areas from overharvesting, and an initiative was formed to create a state marine reserve system advised by regional science panels. The science panel, a public body, decided that Native Americans science was not …

Satellite-Based Phenology Analysis In Evaluating The Response Of Puerto Rico And The United States Virgin Islands' Tropical Forests To The 2017 Hurricanes, Melissa Collin

Cal Poly Humboldt theses and projects

The functionality of tropical forest ecosystems and their productivity is highly related to the timing of phenological events. Understanding forest responses to major climate events is crucial for predicting the potential impacts of climate change. This research utilized Landsat satellite data and ground-based Forest Inventory and Analysis (FIA) plot data to investigate the dynamics of Puerto Rico and the U.S. Virgin Islands’ (PRVI) tropical forests after two major hurricanes in 2017. Analyzing these two datasets allowed for validation of the remote sensing methodology with field data and for the investigation of whether this is an appropriate approach for estimating forest …

Assessing California Commercial Fishing Community Well-Being In The Context Of Marine Protected Area (Mpa) Formation, Samantha Cook

Cal Poly Humboldt theses and projects

Marine protected areas (MPAs)—defined geographic areas where fishing and harvesting activity is limited or restricted—have emerged as a popular marine biodiversity and climate resilience strategy worldwide. MPA monitoring efforts often follow MPA designation to help inform the adaptive management of MPAs and MPA networks. In 2012, California completed the largest statewide system of MPAs to date, consisting of 124 MPAs covering 16% of state waters. Following MPA implementation, the state initiated a long-term monitoring program (2019-2022) to help inform the 10-year MPA management review. This two-chapter thesis presents findings from a state-funded project to conduct long-term socioeconomic monitoring for human …

Effects Of Large Wood Restoration On Coho Salmon In A Northern California Watershed: A Before-After-Control-Impact Experiment, Natalie B. Okun

Cal Poly Humboldt theses and projects

Substantial time, money, and effort are invested in river and stream restoration projects to aid in the recovery of imperiled salmonid populations, but there is little evidence that these efforts have had lasting positive impacts on juvenile fish growth and survival. To assess the effectiveness of large woody debris (LWD) restoration, which is one of the most common restoration practices, I evaluated the growth and survival response of endangered Central California Coast coho salmon (Oncorhynchus kisutch) in a paired watershed before-after impact-control (BACI) study. To determine if LWD supplementation influenced coho salmon growth and survival, two neighboring, similar …

Sediment Production And Delivery From Timber Harvest Roads In Humboldt County, California, Chris P. Faubion

Cal Poly Humboldt theses and projects

Sediment delivery from unpaved actively-used and relatively un-trafficked forest roads are one of the most common sources of impairment to aquatic ecosystems. Hence the objectives of this study were to: 1) compare the variability in erosion rates from actively used and relatively un-trafficked timber harvest roads across multiple water years in Railroad Gulch; 2) identify segment scale controls on road surface erosion and road-to-stream connectivity; 3) develop storm-based and annual segment scale models to predict road sediment production and compare the accuracy of these models to WEPP: Road; and 4) estimate road-related sediment loads to streams.

Between 2014 and 2019 …

Identification Of Mined Areas That May Contribute To Water Quality Degradation At Hobet Coal Mine, West Virginia, Brian P. Murphy

IdeaFest: Interdisciplinary Journal of Creative Works and Research from Cal Poly Humboldt

No abstract provided.

Modeling The Flow Of Hall Creek, Humboldt County, California Using Visualizing Ecosystem Land Management Assessments (Velma) And Calculating The Channel Forming Flow Using The Effective Discharge Calculation, Ethan A. Luckens

Cal Poly Humboldt theses and projects

Due to wide spread stream degradation across the globe, there is great potential for restoring stream and riverine habitat. Land managers often lack necessary information about the stream discharges of ungauged watersheds. This lack of data makes designing stream restoration projects in ungauged watersheds more difficult. This is especially true when trying to determine the channel-forming flow, the discharge that will support a stable channel geometry. In this study, the channel-forming flow was approximated using effective flow. Effective flow is the level of flow that transports to the greatest amount of sediments. One method for calculating effective flow is to …

Assessing Spatio-Temporal Patterns Of Forest Decline Across A Diverse Landscape In The Klamath Mountains Using A 28-Year Landsat Time-Series Analysis, Drew S. Bost

Cal Poly Humboldt theses and projects

Rates of tree mortality in California and the Pacific Northwest have greatly increased in recent years, driven largely by pest and pathogen outbreaks as well as the effects of hotter, warmer droughts. While there have been a multitude of regional-scale assessments of mortality and forest decline, landscape-level studies are necessary to better identify forests that are most vulnerable to decline and to anticipate future changes. This need is particularly notable in the remote and little-studied mountains of northwest California, which are renowned for their diverse, heterogeneous vegetation types. A recent observation of elevated levels of Shasta red fir (Abies …

Persistence Of Stream Restoration With Large Wood, Redwood National And State Parks, California, Diedra L. Rodriguez

Cal Poly Humboldt theses and projects

The conservation and recovery of anadromous salmonids (Oncorhynchus sp.) depend on stream restoration and protection of freshwater habitats. In-stream large wood dictates channel morphology, increases retention of terrestrial inputs such as organic matter, nutrients and sediment, and enhances the quality of fish habitat. Historic land use/land cover changes have resulted in aquatic systems devoid of large wood. Restoration by placement of large wood jams is intended to restore physical and biological processes. An important question for scientists and restoration managers, in addition to the initial effectiveness of restoration, is the persistence and fate of large wood installations. In this …