Environmental Sciences Commons^™

Understanding The Long-Term Patterns Of Change Of A Tidal Marsh In Mission Bay, San Diego, California, Carrie A. Shuster, Theresa Sinicrope Talley Ph.D., Drew Talley Ph.D., Zhi-Yong Yin Ph.D., Kellie Uyeda Ph.D.

Theses

Coastal marshes are among California’s most productive ecosystems and the most impacted, having been extensively modified by dredging, filling, and urban development. This thesis investigates over a century of change for a marsh in Northern Mission Bay, San Diego, California using ecological and spatial analyses.

Chapter 1 provides an overview of the environmental history and current land use of the Northern Mission Bay marsh, tracing changes from pre-contact Indigenous stewardship through colonial and modern urban development. It also introduces a restoration plant palette derived from historical and contemporary species occurrences, ecological functions, and documented cultural uses. By integrating ethnobotanical knowledge …

Testing The Intermediate Disturbance Hypothesis On Anthropogenic Pressure In Central Alabama, Gavin Terrell

Theses

Biodiversity is fundamental to maintaining ecosystem structure and function globally. Prior to the late 20th century, ecological theory generally predicted that biodiversity would be highest in systems experiencing minimal disturbance. However, Joseph H. Connell challenged this view with the Intermediate Disturbance Hypothesis (IDH), which posits that species diversity peaks at intermediate levels of disturbance and declines under conditions of both low and high disturbance. Although widely cited, the applicability of the IDH to natural systems remains debated, particularly in the context of anthropogenic disturbances and when diversity is measured beyond species richness alone.

This study evaluated the predictions of the …

Evaluating Stormwater & Carbon Benefits Of Urban Street Trees, Anthony J. Rodriguez Diaz

Theses

Urban areas experience a multitude of environmental challenges, including flooding and air pollution. In response to these pressures, urban forests have emerged as an essential nature-based strategy to enhance resilience and reduce climate-related risks. The implementation and expansion of urban street trees further contribute to this effort by mitigating stormwater runoff and reducing atmospheric carbon emissions.

Fortunately, advances in environmental modeling have made it increasingly possible to quantify these ecosystem services using specialized software. The United States Department of Agriculture (USDA) Forest Service's i-Tree suite exemplifies this progress. The software provides a comprehensive set of tools designed to quantify environmental …

Assessing Expected Cover Of Invasive Flora Species Near Corridor Features By Distance, Joshua G. Logan

Theses

Fragmentation of landscapes has been a growing topic of interest within scientific literature over the past several decades, as the way we as humans affect our planet becomes more apparent as the years go on. As humans, we have shaped the land and what it contains in immeasurable ways, erasing or forever altering entire natural ecosystems. Chief among the drivers altering these ecosystems is the fragmentation of landscapes, which can have all kinds of effects on natural ecosystems, from limiting nutrient transport to providing easier access for invasives to permeate throughout a landscape. Corridors are significant areas of interest regarding …

Characterizing Fish Communities Using Traditional And Emerging Monitoring Approaches In San Diego County Estuaries, Natalie Katherine De Wet

Theses

Fish communities are essential to estuarine health, playing key roles in food webs, nutrient cycling, and ecosystem functioning. However, the persistence of native fish populations is increasingly threatened by the cumulative impacts of coastal development, pollution, and climate change. Rapid, effective monitoring of species distributions is a priority, enabling timely conservation and management. However, the study of any ecosystem is limited by time, resources, and the consideration that research of a system can damage the ecosystem under study.

This research aimed to characterize fish species richness and evaluate the benefits and limitations of different estuary monitoring approaches. Specifically, this study …

Climate Influence On Both Spatial And Temporal Patterns Of Rocky Intertidal Community Structure In San Diego, California, Emily Jenkins

Theses

The rocky intertidal ecosystem, the coastal area between high and low tides, serves as a critical buffer between land and sea. This ecosystem supports a diverse array of species and provides rich opportunities for exploration and education. With the influence of climate change, this ecosystem faces significant shifts in species distribution, resilience and recovery from environmental disturbances, as well as habitat loss (Jackson & McIlvenny 2011; Jueterbock et al. 2013; Menge & Gravem 2022; Rilov et al. 2021; Sagarin & Barry 1999). Between 2014-2016, climate anomalies El Niño (ENSO) and the Pacific Decadal Oscillation (PDO) combined to create a period …

Monitoring Marine Animal Interactions With Open Ocean Aquaculture And The Potential For Measuring Impacts, Ryan Richard Yont

Theses

Aquaculture, the farming of water-based organisms, is one of the fastest growing industries in the food production sector globally. Aquaculture farms, regardless of type, are categorized as either coastal or offshore marine aquaculture and are generalized into three categories: fed (e.g., finfish), unfed (e.g., filter-feeding bivalves), and autotrophic (e.g. kelp). Viewed as an agricultural industry, marine aquaculture is tightly regulated, particularly in the U.S. Despite this, an area of concern for the public and management alike is the potential for marine life interactions with aquaculture gear. Even the best-run farms represent a change in the physical and biological characteristics of …

An Investigation Of The Sub-Lethal Impacts To Pollinators From Pesticides, Emily Beahm

Theses

In order to feed a growing global population, agricultural practices must utilize pesticides to maintain high yields. Responsible use of pesticides should be based on literature confirming their efficacy and safety. When pesticides are not adequately investigated prior to their release, there can be severe consequences. Many highly effective pesticides, such as the class neonicotinoids, were allowed to be used commercially prior to thorough assessment of their environmental risks, resulting in consequences that largely have fallen to the exposed pollinator populations. To avoid similar outcomes, I tested the popular biopesticide Botanigard which contains Beauveria bassiana, an entomopathogenic fungus previously exposed …

Effects Of Simulated Climate Change On Native Southeastern Grassland Vegetation Using Open Top Chambers, Makaila Carpenter

Theses

The southeastern United States is a critical biodiversity hotspot once covered in prairie grassland ecosystems and now facing significant threats due to urbanization, habitat destruction, over-exploitation, biological invasions, pollution, and climate change. This study analyzes the response of Alabama’s native prairie ecosystem to climate change. We used open top chambers (OTCs) to simulate climate change-induced warming. We assessed the response of ecosystem function and structure to higher temperatures (1-3^oC). The indicators of ecosystem function included phenology, leaf surface area (LSA), specific leaf area (SLA), and aboveground and below net primary productivity (ANPP and BNPP respectively). Ecosystem structure was …

Exploring Microplastic Concentrations And The Sedimentology Of San Diego's Offshore Benthic Environments, Rachel Sarner

Theses

Marine pollution studies are showing infiltration of plastic debris in remote parts of oceans including the deep sea. Microplastics (MPs) are being discovered not only in the ocean’s water column but also benthic sediments reaching thousands of meters in depth. This is the first study to analyze MP concentrations in conjunction with sedimentary characteristics from varying deep-sea environments (coastal, deep ocean, offshore terrace) in the Southern California Continental Borderland (CCB). Our goal for this study was to observe how the concentration and type (morphology, color, size) of microplastics varied with distance from shore, with water depth, and between different submarine …

Glacier Lake Inventory And Lake Outburst Flood Hazard Assessment In Kanchenjunga Conservation Area, Nepal, Prabish Khadka Chhetri

Theses

This study presents a comprehensive assessment of glacial lakes and land surface temperature (LST) dynamics within the Kanchenjunga Conservation Area (KCA) from 2010 to 2023. The KCA holds significant ecological importance, serving as a critical habitat for diverse flora and fauna, while also playing a vital role in regional hydrological systems. Additionally, its stunning landscapes attract tourists and mountaineers from around the world, further emphasizing the need for understanding environmental changes within the area. Utilizing medium to high-resolution satellite imagery from PlanetScope for glacial mapping and Landsat for LST analysis, the research aimed to achieve two primary objectives: creating an …

Investigating The Mass Mortality Induced Factors Of Pearl Oyster (Pinctada Radiata) At Abu Dhabi Pearls Farm, Uae, Hamad Ahmed Almansoori

Theses

The aquaculture of shellfish plays a crucial role in enhancing maritime environments by mitigating algal blooms and improving water quality through the filtration of organic matter, nutrients, and bacteria. This study investigated the environmental factors influencing oyster (Pinctada radiata) mortalities through a comprehensive analysis of water quality in Al Mirfa and Al Mughirah farming sites of Abu Dhabi (UAE), from February 2021 to February 2022. To reach such understanding of the main factors led to mass mortalities of cultivated oysters, different monthly sampling and both chemical and biological analyses of the farm water, sediments as well as for both living …

Economical And Environmental Evaluation Of Non-Residential Demand Response In The European Transition To Zero-Carbon Energy, Markus Fleshutz

Theses

To meet climate objectives, major energy consumers with local multi-energy systems (L- MESs) must transition to renewable energy sources soon. The variability of renewable energies requires increased operational flexibility for integration. In this context, demand response (DR), a strategy in which electricity consumers adjust their load profiles in response to incentives, has become crucial, offering cost-effective flexibility. It supports L-MESs in integrating renewable energy, reducing decarbonization costs, and enhancing resilience. However, quantifying the economic DR potentials for L-MESs under carbon emission constraints is complex, especially when considering investment options in distributed energy resources. This complexity hinders the rapid adoption of …

Biochemical Charactrization Of A Fructosyltransferase Enzyme From A Halophilic Archaeon, Haloarcula Marismotui, For Biotechnological Applications, Ahlam Khalifa Al Ameri

Theses

Fructosyltransferase enzymes are involved in the production of fructans, which are polymers of fructose and naturally present in many foods like fruits, vegetables, legumes, and cereals. Fructans with short chain lengths are called Fructooligosaccharides (FOS), which are small dietary fibers having low caloric values and are known as “prebiotics”. Fructans have a broad range of applications in the food, pharmaceutical, cosmetics, and chemical industries. They have unique physiochemical properties and functionalities depending on the source of enzyme used for their production. The present study aimed at the utilization of a recently discovered unique fructosyltransferase enzyme from an extremely halophilic microorganism, …

Tourism, Mapping, Retail And Recreational Trails: A Case Study Of Connectivity Between Trails And Adjacent Downtowns In Anniston, Alabama, Usa, Jennifer Green

Theses

This study examines the estimated increase in economic impact on a geography’s local economy by creating cross-marketing efforts between expanding an established outdoor recreation trail to a closely located city downtown commerce district. This research will analyze the resulting potential rise in sales/lodging tax revenues for that city by mapping the trail and downtown district, and cross-marketing the other to users of both or either venue. Potential increase in economic impact will be estimated utilizing IMPLAN methodology by assessing the economic impact on the local economy that a percentage range of increased spending resulting from this cross-marketing effort could generate.

Biohydrogen Production Of A Co-Culture Consisting Of Halophytic Cyanobacterium Phormidium Keutzingianum And Activated Sludge Bacteria Using Different Exogenous Carbon Substrates And Salt Concentrations, Maitha Mohammed Al Nuaimi

Theses

Various studies have proved the ability of different types of cyanobacteria and algae to produce hydrogen (H₂) by splitting water molecules into H₂ and oxygen (O₂) using specialized enzymes (hydrogenase and nitrogenase enzymes) through the biophotolysis process. However, the production of O₂ acts as the main process inhibitor. Several researchers studied this O₂ sensitivity and proposed effective solutions to regulate O₂ concentration. By co-culturing algae with aerobic bacteria, the consumption of the resulting oxygen could be attained and thus reducing the sensitivity of the enzyme to the evolved O₂. In …

Assessing Ecosystem Health Through Contaminants In The Tijuana River National Estuarine Research Reserve, Nancy Torres

Theses

Although the Tijuana River Estuary (TRE) remains the largest, most-intact coastal wetland in Southern California, it has a history of major changes, much of this related to its location immediately north of the US / Mexico Border. One of the primary challenges is cross-border flows from the rapidly growing city of Tijuana, Baja California, Mexico, and the delivery of wastewater, debris, and sediment to sensitive coastal wetland ecosystems. There is a need to more fully investigate these environmental changes to assess the ecosystem health of the Tijuana River Estuary over time, especially related to pollution impacts. This can inform an …

Assessing The Effectiveness Of Integrated Multi-Trophic Aquaculture For Growing West Coast Venus Clams, Avery Wallace

Theses

With demand for sustainable sources of seafood on the rise, California is looking to expand aquaculture with a focus on innovative culturing methods and use of native or resident species. Therefore, this study examined the potential for culturing native North American west coast venus clams (Chione californiensis and Chione undatella) using integrated multi-trophic aquaculture (IMTA). An ITMA approach was chosen because it is a culture method that uses species from different but functionally complementary trophic levels that have been found to reduce the potential negative effects of traditional monoculture. California sea cucumber (Parastichopus californicus) and the seaweeds red ogo (Gracilaria …

Assessing The Health Effects Of Climate Change, Social Vulnerability, And Environmental Justice In Camden County, New Jersey, Daniil Ivanov

Theses

Climate change negatively impacts health, while socially vulnerable and overburdened communities disproportionately experience climate change and negative health determinants. Camden County is used as a case study for analyzing environment, socioeconomics, and health. Environmental variables—PM2.5 and land cover of impervious surfaces, floodplains, and forests—were compared to the CDC Social Vulnerability Index (SVI) at the census tract level, finding significant correlations between land cover, air quality, and the SVI. The overburdened communities defined by the NJ Environmental Justice Law experienced a significantly higher incidence of emergency department visitation for respiratory, circulatory, and mental illnesses than non-overburdened communities. Health outcomes were compared …

Mangrove Growth Promotion By Endophytic Actinobacteria And Seaweed Extract, Ameera Khalfan Salem Alkaabi

Theses

In this study, I aimed to determine the impact of the application of a commercial seaweed extract (SWE) bio-stimulant and endophytic actinobacterial isolates on growth performance and endogenous hormonal levels of mangroves. Therefore, I isolated endophytic plant growth promoting (PGP) actinobacteria (PGPA) from mangrove roots; and evaluated their potential as biological inoculants on mangrove seedlings under greenhouse and open-field nursery conditions. Seven salt tolerant isolates had the ability to produce different levels of in vitro plant growth regulators (PGRs) and 1-aminocyclopropane-1-carboxylic acid (ACC) deaminase (ACCD), and to solubilize phosphorus. Accordingly, only one isolate, Streptomyces tubercidicus UAE1 (St), was …

The Effect Of Different Feeding Regimes On Recent Nutritional And Growth Measurements In Juvenile California Killifish (Fundulus Parvipinnis), Emily Parks

Theses

Gaining a deeper understanding of in-situ growth approximations for juvenile fishes is one way to understand how food consumption may affect fish growth. If variations in growth rate are strongly mirrored by past food status, then the condition (degree of well-being) of fish can be potentially used as a reference for relative prey availability. Furthermore, confirming that there is a positive relationship between food availability and fish growth rate is a critical first step to deepen our understanding of growth rate variation as well as examining if growth can be a proxy for habitat quality.

The California killifish (Fundulus …

Safe Water For All: A Multi-Modal Approach To North Alabama's Water Resources, Elijah Walker

Theses

Environmental degradation is a destructive force produced by the human disturbance of pollution. It is a phenomenon that gradually evolves landscapes over time resulting in irreversible outcomes. Environmental degradation physically affects spaces’ resources, objects, and inhabiting humans. This study observes the impacts of pollution beyond physical boundaries and how it affects human identity/sense of place through the utilization of geographic information systems. Specifically, it examines cultural identity developed through human experiences and connections to landscapes containing water resources. Following, pollution contaminates water resources disrupting experiences and connections thus causing the cultural identity to disappear. The case study applied to this …

Application Of Natural Radioactivity For Hydrogeological And Environmental Assessment Of Groundwater In Ras Alkhaimah, Uae, Mohammed Nasser Abdullah Al-Saqri

Theses

Groundwater includes a certain concentration of natural radioactive isotopes of uranium (U) and its decay products (daughters) like radon (Rn). Defining the concentration levels, spatial distribution, and possible environmental impact of these isotopes in groundwater is vital for sustainable groundwater resources in the United Arab Emirates (UAE). This dissertation focuses on documenting the distribution and determining the probable environmental impact and sources of Uranium-235 (²³⁵U), Uranium-238 (²³⁸U), and Radon-222 (²²²Rn) in groundwater in the Northern part of the UAE and specifically in the Wadi Al Bih aquifer in Ras Al Khaimah Emirate. The sampled …

Studying Neurotoxic Effects Of Three Synthetic Insecticides And Two Herbal Infusions On The Nervous System Of The Fruit Fly Drosophila Melanogaster, Sara Khamis Obaid Hamarain Al Dhaheri

Theses

Pesticides applied on plants and animals can reach the human diet once they enter food chains. Insecticides are neurotoxic agents; they have the potential of causing damage to the nervous system in people. The damage could induce or promote neurodegenerative diseases such as the Parkinson’s and Alzheimer's. It is well-documented that the exposure to the insecticide chlorpyrifos (CPF) stimulate the Parkinson disease in humans and experimental animals. Thus, this research project will study effect of three synthetic insecticides pirimicarb, tefluthrin, and CPF on the nervous system of Drosophila melanogaster as a model organism. In addition, the project will evaluate the …

Biological Treatment Of Produced Water Using Algae: A Proof Of Concept, Shibin Hashem Mohammed Nadersha

Theses

Produced water (PW) is the effluent generated during oil mining and extraction. On average, for every barrel of oil, 4 - 5 barrels of PW are generated worldwide. In UAE, 1.22 billion cubic meters of PW were generated in the year 2017. Proper management of PW is thus very important taking into account the large volumes of it being generated. In addition, PW is considered toxic as it contains various contaminants such as aliphatic and aromatic hydrocarbons, inorganic salts, metals, phenols, radioactive materials, and chemical additives. Disposal of untreated PW into oceans and water bodies can cause adverse effects on …

Improving Phytoremediation Of Oil Polluted Soil In The Uae Using Acc Deaminase Producing Bacteria Under Arid Conditions, Maitha Mubarak Almansoori

Theses

Many 1-aminocyclopropane-1-carboxylic acid (ACC) deaminase-producing and oil-degrading rhizosphere actinobacteria were isolated from oil-contaminated soils in the United Arab Emirates. These actinobacterial isolates were further selected based on their ability to solubilize phosphorus, to produce siderophores, and to produce plant growth regulators (PGRs) including auxins and polyamines. The ability of the most-promising isolate #20 (Streptomyces sp.) to promote the growth of the hyper-accumulating plants “Bermuda grass” in soil polluted with Light Arabian Crude Oil (LACO) was evaluated under greenhouse conditions. Under controlled greenhouse conditions, the application of the strongest Streptomyces sp. #20 which exhibited the maximum production of ACC deaminase and …

Plankton Dynamic At Eastern Arabian Gulf And Sea Of Oman, Muzna Mohammed Husam Saeed Al Junaibi

Theses

The present study is part of the collaborative research project entitled “Comparative Analysis and Predictions of Algal Blooms in the Arabian Gulf and the Sea of Oman”, between the United Arab Emirates University and Sultan Qaboos University (Grant # G00002684- 31S321), in which simultaneous and intensive biweekly plankton and water samples were collected from two opposite coastal stations off the Strait of Hormuz with the aim to study plankton dynamics at the Arabian Gulf and the Sea of Oman and the effect of environmental parameters on their community structures during the period from May 2018 until May …

The Red Palm Weevil In The Uae: Morphological Diversity And Rnai-Mediated Gene Silencing Of Two Cuticle-Related Genes, Safa Hashem Mohammed Musaed

Theses

Red Palm Weevil (RPW), Rhynchophorus ferrugineus (Coleoptera: Curculionidae), threatens palm trees worldwide. A better understanding of this insect can help with designing an adequate management strategy. This study aimed to a better understand the morphological diversity of RPW and examined RNAi-mediated gene silencing of two cuticle-related genes, vestigial (vg) gene, and Laccase (Lac2) gene by injecting the last larval stage with double-stranded RNA (dsRNA). For the morphological diversity study, adults of RPW were collected and classified by their prothoracic spots. Additional morphological characters were measured such as Pronotum Length (PL), Pronotum Width (PW), Elytra Length (EL), Elytra Width (EW), and …

Assessment Of Heavy Metals In Sharks From The Arabian Gulf Waters, The United Arab Emirates, Noor Alali

Theses

Metals occur naturally in the environment however anthropogenic activities have contributed to their increase in the marine ecosystem. As elements have the ability to bioaccumulate, biomagnify and transfer between biological compartments throughout the food web, they pose a great threat to living biota. The characteristics of the Arabian Gulf make it a harsh environment for marine species especially when multiple stressors are acting together. Rhizoprionodon acutus (milk shark) and Carcharhinus sorrah (spot-tail shark) are essential compartments of the Arabian Gulf ecosystem. As they are found up in the food chain and considered a predator species they are under the threat …

Environmental Assessment Of The Impact Of Land-Based Discharges On Marine Water And Sediment Quality In Dubai, Uae, Ayman Fathy Halawa

Theses

The current seawater and Creek – Canal waterway in the Emirate of Dubai, UAE, is under tremendous pressure because of continuous urban water discharges from land-based sources. Therefore, the impact of urban water discharges on marine water and sediment quality in the Emirate requires a thorough assessment. The main objective of this study is to assess the impacts of effluent discharges on the quality of water and sediment in the open sea and Dubai Creek. The land-based sources include the power and desalination plants, industrial sector, sewage treatment plant, and stormwater runoff. To achieve the stated objective, relevant data on …