Geology Commons^™

Biogeochemical Evolution Of Cryoconite Holes On Canada Glacier, Taylor Valley, Antarctica, Elizabeth A. Bagshaw, Martyn Tranter, Andrew G. Fountain, Kathleen A. Welch, Hassan J. Basagic, W. Berry Lyons

Geography Faculty Publications and Presentations

The cryoconite holes of the McMurdo Dry Valleys are simple, closed biogeochemical systems involving water, ice, mineral and organic debris, which serve as ecosystems for consortia of microorganisms. This study is the first to document the seasonal and annual chemical evolution of solutes in cryoconite holes. Samples of glacier ice, frozen cryoconite holes and those containing water were collected during the austral summer of 2005–2006. The isolation age was calculated from the excess Cl‾ in the holes, and varied from 0 to 5 years (a), consistent with the last hot summer when the cryoconite holes were open to the atmosphere. …

Evaluation Of Equalization Basins As Initial Treatment For Flue Gas Desulfurization Waters, Meg Iannacone

All Theses

Coal-fired power plants are introducing flue gas desulfurization (FGD) scrubbers to reduce sulfur dioxide and mercury emissions in order to meet air quality standards. FGD scrubber systems utilize a mixture of limestone, water, and organic acids to precipitate sulfur compounds. The resulting FGD water and associated particulates often contain constituents of concern including chlorides, inorganic elements (Hg, As, and Se), and sulfates that must be treated before discharge. Constructed wetland treatment systems, consisting of an equalization basin followed by wetland reactors, present a viable option to efficiently treat FGD waters. Equalization basins are designed to cool and homogenize FGD water …

The Rate And Timing Of Direct Mountain Front Recharge In An Arid Environment, Silver Island Mountains, Utah, Gregory T. Carling

Theses and Dissertations

Direct mountain front recharge (MFR), water table recharge at the base of the mountain front, was evaluated on the arid (<250 mm/yr precipitation) Silver Island Mountains by comparing mountain precipitation to groundwater response. Direct MFR contributions were assessed on two catchments, one bedrock (i.e., mountain block) dominated and the other alluvial fan (i.e., mountain front) dominated. Catchment precipitation and shallow groundwater levels at each catchment outlet were measured for a 24 month period beginning October 2005. This time period captured one complete hydrologic cycle (December 2005-February 2007) for which annual and seasonal direct MFR rates were calculated. Annual direct MFR was calculated using a modified version of the water table fluctuation (WTF) method as 0.015-0.016% of precipitation on both catchments, with seasonal variations of 0% in summer up to 0.023% in winter, spring and fall. Seasonal direct MFR contributions are similar on the bedrock and the alluvial fan dominated catchments, with a notable exception during fall 2006 when direct MFR was twice as effective on the bedrock dominated system than on the alluvial fan dominated system (0.022% and 0.011% of precipitation, respectively). Darcy's law calculations show similarly low annual direct MFR contributions (0.013-0.032% of precipitation) as those calculated by the WTF method. Calculated direct MFR is 10% or less than typical calculated combined MFR (near surface recharge and deep underflow from the mountain block) for similar terrains and climates, and is only 3.5% of the combined MFR for the Silver Island Mountains as calculated by the Maxey-Eakin model. However, based on total recharge to the adjacent playa, it is apparent that the Maxey-Eakin model overestimates combined MFR, and the small calculated direct MFR is at least 50% of combined MFR. Despite some uncertainty in the numerical results, several patterns are evident in the data. The data show that direct MFR occurs in response to small rainfall events throughout much of the year, and that snowmelt is not necessary to produce direct MFR. The data also show that direct MFR responds more quickly and flushes through the system faster on the alluvial fan catchment than on the bedrock catchment.

The Global Stratotype Section And Point (Gssp) For The Base Of The Katian Stage Of The Upper Ordovician Series At Black Knob Ridge, Southeastern Oklahoma, Usa, Daniel Goldman, Stephen A. Leslie, Jaak Nõlvak, Seth Young, Stig M. Bergström, Warren D. Huff

Geology Faculty Publications

The International Subcomission on Ordovician Stratigraphy (ISOS) of the International Commission on Stratigraphy (ICS) recently defined the base of the global Upper Ordovician Series to be at the first appearance datum (FAD) of the graptolite species Nemagraptus gracilis in the Fågelsång GSSP in southern Sweden. This designation recognized the tremendous utility for global correlation of the first appearance of a cosmopolitan taxon that occurs within a consistent succession of other first appearance datums (e.g., Finney and Bergström, 1986; Bergström et al., 2000). Current efforts by the ISOS have focused on subdividing the Upper Ordovician into three stages and choosing appropriate …

Adsorption Of Lead On Single And Mixed Solid Systems, Soumya Das

Dissertations

Metal oxy-hydroxides and phyllosilicate minerals play a significant role in the fate and transport of heavy metals in the environment (Bertsch and Seaman, 1999). Chemical speciation of metals affects their bioavailability and chemical reactivity (Stumm and Morgan, 1996). Surface complexation models (SCMs) based on equilibrium thermodynamic principles have been successfully used to quantify adsorption of heavy metals on pure solid minerals, including phyllosilicates and oxy-hydroxides. For natural sediments with mixed mineralogy, Davis et al. (1998) suggested two different SCM approaches, namely, the component additivity and generalized composite models. In this study, adsorption of lead on pure HFO, silica and kaolinite …

Ground-Level Ozone Across Kentucky: Modeling And A Synoptic Analysis Of High Concentrations, John Walker

Masters Theses & Specialist Projects

Rural areas are often more susceptible to high concentrations of ground-level ozone (O3) than urban areas. However, rural populations are, for the most part, unaware of this problem. Currently the rural areas of Kentucky have no daily forecast for O3. This research addresses the issue by using methodologies from previous Kentucky O3 modeling research to develop a daily forecast model within Geographic Information Systems. The rural O3 model developed by Kendrick (2005) will be used in this research, as a Standard model, along with an application of the model introduced by Cobourn and Hubbard (1999), as the Hi model, to …

Major And Trace-Element Chemistry Of Minerals In Lithologies A And B In Martian Meteorite Eeta79001: Petrogenesis Revisited, Michael Joseph Mellin

Masters Theses

EETA79001 is a unique shergottite composed of two mafic lithologies (termed LithA and LithB) that are separated by an igneous contact. Both lithologies have basaltic compositions; however, LithA contains megacrysts of olivine, orthopyroxenes, and chromite whereas LithB does not; also, LithA is finer-grained than LithB. Currently, the literature is in disagreement regarding the formation of this unique meteorite, especially regarding LithA. Different formational theories (e.g. fractional crystallization, magma mixing, assimilation, and impact melting) have their own constraints (chemical, thermal, or petrographic). This study uses petrographic observations combined with major- and trace- element compositions within minerals to investigate the petrogenesis of …

Persistent Near-Bottom Aggregations Of Mesopelagic Animals Along The North Carolina And Virginia Continental Slopes, John V. Gartner Jr., Kenneth J. Sulak, Steve W. Ross, Ann Marie Necaise

United States Geological Survey: Staff Publications

Submersible observations during four missions over the North Carolina and Virginia continental slopes (184–900 m) documented the occurrence of large aggregations of mesopelagic Wshes and macronektonic invertebrates near or on the bottom. Aggregated mesopelagics formed a layer up to tens of meters deep positioned from a few centimeters to 20 m, usually <10 >m, above the substrate. Aggregations were numerically dominated by microvores, notably the myctophid Wsh Ceratoscopelus maderensis and the penaeid shrimp Sergestes arcticus. Consistently present but in relatively lower numbers, were mesopelagic predators, including the paralepidids Notolepis rissoi and Lestidium atlanticum, the eel Nemichthys scolopaceus, the …

An Approach To Mapping Of Shallow Petroleum Reservoirs Using Integrated Conventional 3d And Shallow P- And Sh-Wave Seismic Reflection Methods At Teapot Dome Field In Casper, Wyoming, Anita Onohuome Okojie-Ayoro

Theses and Dissertations

Using the famous Teapot Dome oil field in Casper, Wyoming, USA as a test case, we demonstrate how high-resolution compressional (P) and horizontally polarized shear (SH) wave seismic reflection surveys can overcome the limitations of conventional 3D seismic data in resolving small-scale structures in the very shallow subsurface (< 100-200 m (~328-656 ft)). We accomplish this by using small CMP intervals (5 ft and 2.5 ft, respectively) and a higher frequency source. The integration of the two high-resolution seismic methods enhances the detection and mapping of fine-scale deformation and stratigraphic features at shallow depth that cannot be imaged by conventional seismic methods. Further, when these two high-resolution seismic methods are integrated with 3D data, correlated drill hole logs, and outcrop mapping and trenching, a clearer picture of both very shallow reservoirs and the relationship between deep and shallow faults can be observed. For example, we show that the Shannon reservoir, which is the shallowest petroleum reservoir at Teapot Dome (depth to the top of this interval ranging from 76-198 m (250-650 ft)) can only be imaged properly with high-resolution seismic methods. Further, northeast-striking faults are identified in shallow sections within Teapot Dome. The strike of these faults is approximately orthogonal to the hinge of Teapot Dome. These faults are interpreted as fold accommodation faults. Vertical displacements across these faults range from 10 to 40 m (~33 to 131 ft), which could potentially partition the Shannon reservoir. The integration of 3D and high-resolution P-wave seismic interpretation helped us determine that some of the northeast-striking faults relate to deeper faults. This indicates that some deeper faults that are orthogonal to the fold hinge cut through the shallow Shannon reservoir. Such an observation would be important for understanding the effect on fluid communication between the deep and shallow reservoirs via these faults. Furthermore, the high-resolution seismic data provide a means to better constrain the location of faults mapped from drill hole logs. Relocation of theses faults may require re-evaluation of well locations as some attic oil may have not been drained in some Shannon blocks by present well locations. Therefore our study demonstrates how conventional 3D seismic data require additional seismic acquisition at smaller scales in order to image deformation in shallow reservoirs. Such imaging becomes critical in cases of shallow reservoirs where it is important to define potential problems associated with compartmentalization of primary production, hazard mitigation, enhanced oil recovery, or carbon sequestration.

Demersal Fishes Associated With Lophelia Pertusa Coral And Hard-Substrate Biotopes On The Continental Slope, Northern Gulf Of Mexico, Kenneth J. Sulak, R. Allen Brooks, Kirsten E. Luke, April D. Norem, Michael Randall, Andrew J. Quaid, George E. Yeargin, Jana M. Miller, William M. Harden, John H. Caruso, Steve W. Ross

United States Geological Survey: Staff Publications

The demersal fish fauna of Lophelia pertusa (Linnaeus, 1758) coral reefs and associated hard-bottom biotopes was investigated at two depth horizons in the northern Gulf of Mexico using a manned submersible and remote sampling. The Viosca Knoll fauna consisted of at least 53 demersal fish species, 37 of which were documented by submersible video. On the 325 m horizon, dominant taxa determined from frame-by-frame video analysis included Stromateidae, Serranidae, Trachichthyidae, Congridae, Scorpaenidae, and Gadiformes. On the 500 m horizon, large mobile visual macrocarnivores of families Stromateidae and Serranidae dropped out, while a zeiform microcarnivore assumed importance on reef “Thicket” biotope, …

Exceptionally Preserved Jellyfishes From The Middle Cambrian, Paulyn Cartwright, Susan L. Halgedahl, Jonathan R. Hendricks, Richard D. Jarrard, Antonio C. Marques, Allen G. Collins, Bruce S. Lieberman

Jonathan R. Hendricks

Cnidarians represent an early diverging animal group and thus insight into their origin and diversification is key to understanding metazoan evolution. Further, cnidarian jellyfish comprise an important component of modern marine planktonic ecosystems. Here we report on exceptionally preserved cnidarian jellyfish fossils from the Middle Cambrian (~505 million years old) Marjum Formation of Utah. These are the first described Cambrian jellyfish fossils to display exquisite preservation of soft part anatomy including detailed features of structures interpreted as trailing tentacles and subumbrellar and exumbrellar surfaces. If the interpretation of these preserved characters is correct, their presence is diagnostic of modern jellyfish …

Exceptionally Preserved Jellyfishes From The Middle Cambrian, Paulyn Cartwright, Susan L. Halgedahl, Jonathan R. Hendricks, Richard D. Jarrard, Antonio C. Marques, Allen G. Collins, Bruce S. Lieberman

Faculty Publications

Cnidarians represent an early diverging animal group and thus insight into their origin and diversification is key to understanding metazoan evolution. Further, cnidarian jellyfish comprise an important component of modern marine planktonic ecosystems. Here we report on exceptionally preserved cnidarian jellyfish fossils from the Middle Cambrian (~505 million years old) Marjum Formation of Utah. These are the first described Cambrian jellyfish fossils to display exquisite preservation of soft part anatomy including detailed features of structures interpreted as trailing tentacles and subumbrellar and exumbrellar surfaces. If the interpretation of these preserved characters is correct, their presence is diagnostic of modern jellyfish …

An Update On Groundwater Conditions At The Site Of The York College Cuny Campus In Southeastern Queens County, New York City, Nazrul I. Khandaker, Stanley Schleifer, Zarine Ali, Edward A. Molteni

Publications and Research

The wells operated by the Jamaica Water Supply Company in Queens represent the only large scale utilization of groundwater for public water supply in New York City in recent years. These wells were shut down, for the most part, beginning in 1996. Since that time, water table elevations in the area, which had been drawn down by the withdrawal activity of the Jamaica Water Supply Company, have risen significantly causing some high groundwater problems, including flooding of basements. The New York City Department of Environmental Protection (NYCDEP) has held public hearings on a contemplated resumption of ground water withdrawal in …

Marks, Mary E. (Sc 1523), Manuscripts & Folklife Archives

MSS Finding Aids

Finding aid and full-text scan (Click on "Additional Files" below) for Manuscripts Small Collection 1523. Dissertation (126 p.; illus.; maps) by Mary E. Marks titled "The Rock Asphalt Industry of Western Kentucky" written for the Department of Geography at the University of Chicago and submitted in December 1931. Discusses several important asphalt rock mining operations in the south central section of Kentucky.

Geogram 2007, David J. Keeling Editor, Wku Department Of Geography And Geology

Earth, Environmental, and Atmospheric Sciences Publications

No abstract provided.

Hydrological Monitoring With Hybrid Sensor Networks, Thomas V. Freiberger, Sahra Sedigh, Estella A. Atekwana

Electrical and Computer Engineering Faculty Research & Creative Works

Existing hydrological monitoring systems suffer from short- comings in accuracy, resolution, and scalability. Their fragility, high power consumption, and lack of autonomy necessitate frequent site visits. Cabling requirements and large size limit their scalability and make them prohibitively expensive. The research described in this paper proposes to alleviate these problems by pairing high-resolution in situ measure- ment with remote data collection and software maintenance. A hybrid sensor network composed of wired and wireless connections autonomously measures various attributes of the soil, including moisture, temperature, and resistivity. The mea- surements are communicated to a processing server over the existing GSM cellular …

Report On Mini-Workshop “Bringing Margins Science To The Classroom”, Cathy Manduca, Jeffrey G. Ryan, Don Reed

Geology Faculty Publications

MARGINS has been awarded an NSF Course, Curriculum, and Laboratory Improvement (CCLI) grant to bring MARGINS research into widespread use in undergraduate teaching in ways that showcase the integrated, multidisciplinary approach that is characteristic of modern, front-line geoscience research. In collaboration with the Science Education Resource Center (SERC) at Carleton College, the project is developing a web-based collection of teaching materials referred to as “Mini-Lessons” (http://serc.carleton.edu/margins). Mini-Lessons range in scope from something as simple as the use of MARGINS science to illustrate a lecture to multi-day lab projects that capitalize on the MARGINS Data Repository. An exciting aspect of this …

Who Will Put America Back Together Again?, David J. Keeling

Earth, Environmental, and Atmospheric Sciences Faculty Publications

No abstract provided.

Shallow Slab Fluid Release Across And Along The Mariana Arc-Basin System: Insights From Geochemistry Of Serpentinized Peridotites From The Mariana Fore Arc, Ivan P. Savov, Jeffrey G. Ryan, Massimo D'Antonio, Patricia Fryer

Geology Faculty Publications

Shallow slab devolatilization is not only witnessed through fluid expulsion at accretionary prisms, but is also evidenced by active serpentinite seamounts in the shallow fore-arc region of the Mariana convergent margin. Ocean Drilling Program (ODP) Leg 195 recovered serpentinized peridotites that present a unique opportunity to study the products of shallow level exchanges between the upper mantle and slab-derived fluids. Similar to samples recovered during ODP Leg 125, the protoliths of these fore-arc serpentinized peridotites are mantle harzburgites that have suffered large volume melt extraction (up to 25%) prior to interactions with fluids released from the downgoing Pacific Plate. Samples …

Contact Metamorphism In The Malashan Dome, North Himalayan Gneiss Domes, Southern Tibet: An Example Of Shallow Extensional Tectonics In The Tethys Himalaya, Tetsuo Kawakami, Mutsuki Aoya, Simon Wallis, Jeffrey Lee, Kentaro Terada, Yu Wang, Matt Heizler

All Faculty Scholarship for the College of the Sciences

Combined petrographic, structural and geochronological study of the Malashan dome, one of the North Himalayan gneiss domes, reveals that it is cored by a Miocene granite, the Malashan granite, that intruded into the Jurassic sedimentary rocks of Tethys Himalaya. Two other granites in the area are referred to as the Paiku and Cuobu granites. New zircon SHRIMP U-Pb and muscovite and biotite ⁴⁰Ar-³⁹Ar dating show that the Paiku granite was emplaced during 22.2–16.2 Ma (average 19.3 ± 3.9 Ma) and cooled rapidly to 350–400 °C at around 15.9 Ma. Whole-rock granite chemistry suggests the original granitic magma …

Microbial Nanowires: Is The Subsurface "Hardwired"?, Dimitrios Ntarlagiannis, Estella A. Atekwana, Eric A. Hill, Yuri A. Gorby

Geosciences and Geological and Petroleum Engineering Faculty Research & Creative Works

The Earth's shallow subsurface results from integrated biological, geochemical, and physical processes. Methods are sought to remotely assess these interactive processes, especially those catalysed by micro-organisms. Using saturated sand columns and the metal reducing bacterium Shewanella oneidensis MR-1, we show that electrically conductive appendages called bacterial nanowires are directly associated with electrical potentials. No significant electrical potentials were detectable in columns inoculated with mutant strains that produced non-conductive appendages. Scanning electron microscopy imaging revealed a network of nanowires linking cells-cells and cells to mineral surfaces, "hardwiring" the entire length of the column. We hypothesize that the nanowires serve as conduits …

Blue Nile Incision On The Ethiopian Plateau: Pulsed Plateau Growth, Pliocene Uplift, And Hominin Evolution, Nahid D.S. Gani, M. Royhan Gani, Mohamed G. Abdel Salam

Geosciences and Geological and Petroleum Engineering Faculty Research & Creative Works

The 1.6-km-deep Gorge of the Nile, a rival of the Grand Canyon, resulted from the deep incision of the Blue Nile drainage into the uplifted Ethiopian Plateau. Understanding the incision history of the plateau is crucial to unraveling the Cenozoic tectonoclimatic evolution of the region, particularly because the region has long been used as a natural laboratory to understand the geodynamics of continental rifting and the evolution of hominins. We undertake a quantitative geomorphologic approach integrating field, geographic information system (GIS), and digital elevation model (DEM) data to analyze incision (volume, long-term rates, and spatiotemporal variability) and river longitudinal profiles …

Remote Sensing And Gis Analysis Of Spatial Distribution Of Fracture Patterns In The Makran Accretionary Prism, Southeast Iran, Shankar Babu Pokharel

Geosciences Theses

This study shows that remote sensing and GIS are powerful tools in identifying geologically induced lineaments from digitally enhanced ETM+ satellite imageries and the digital elevation model (DEM) in remote areas such as the Makran accretionary prism, southeast Iran. The presence of the conjugate shear fractures in the eastern part, along with the extensional, and the presence of reidal sets associated with the subsidiary fractures of the Minab-Zendal fault system in the western part, suggests that the structural pattern changes from pure shear to simple shear from east to the west across the prism. Moreover, the gradual increase in the …

Comparative Baseflow Hydrochemistry Of Various Septic System Density Groups Within The Yellow River Watershed, Gwinnett County, Georgia, Robert Carl Neurath

Geosciences Theses

Baseflow water chemistry between different septic system density groups was analyzed to understand how septic system usage impacts the water quality of the Yellow River Watershed located in Gwinnett County, Georgia. Seventy water samples were collected at baseflow conditions in the summer of 2006. The samples were analyzed for the abundance and distribution of chlorides, sulfates, nitrates, and specific conductance. Geographic Information Systems were used to determine sample collection sites, assign samples into density groups, and spatially analyze and display the results. Statistical methods were used to compare the results of each density group with all others,and to find any …

Mapping The Martian Geologic Record: Studies Of The Gusev Crater Spirit Landing Site And Plagioclase Feldspar Compositions On Mars, Keith Alan Milam

Doctoral Dissertations

The flurry of activity involved in the scientific study of Mars has resulted in multiple new data sets from several missions (Mars Global Surveyor (MGS), Mars Odyssey (MO), Mars Exploration Rovers (MER), Mars Reconnaissance Orbiter (MRO), and Mars Express) that provide information for unlocking the planet’s geologic and climatic history.

This three part study utilized both orbital data and laboratory experiments to examine Mars for morphologic and mineralogic evidence of aqueous activity and magmatic evolution.

The first study examined Gusev Crater, landing site for the Spirit MER rover. This work began during final landing site selection and was published just …

Geostatistical And Stochastic Study Of Flow And Tracer Transport In The Unsaturated Zone At Yucca Mountain, Ming Ye, Feng Pan, Xiaolong Bill Hu, Jianting Zhu, Amy J. Smiecinski

Publications (YM)

Yucca Mountain has been proposed by the U.S. Department of Energy as the nation’s long-term, permanent geologic repository for spent nuclear fuel or high-level radioactive waste. The potential repository would be located in Yucca Mountain’s unsaturated zone (UZ), which acts as a critical natural barrier delaying arrival of radionuclides to the water table. Since radionuclide transport in groundwater can pose serious threats to human health and the environment, it is important to understand how much and how fast water and radionuclides travel through the UZ to groundwater. The UZ system consists of multiple hydrogeologic units whose hydraulic and geochemical properties …

Modified Fenton Oxidation Of Hydrocarbon Contaminated Soils With Cao2: Microbial Survival And Surfactant Production, Abraham Matthew Northup

Dissertations

The efficacy of CaO₂ for use in modified Fenton's (MF) reactions was investigated in this study, with the goal of developing a CaO₂-based MF oxidation technology for use in in situ chemical oxidation. Traditionally, liquid H₂O₂ (HP) is used, and is injected into the subsurface in excess to ensure a sufficient radius of influence. CaO₂ was investigated as an alternative source of H₂O₂ for MF reactions.

First, the rate of dissolution of powdered CaO₂ and the yield of HP was investigated. Our results showed that the rate of dissolution …

Tectonics Of The Northeastern Inner Piedmont, Northwestern Nc, From Detailed Geologic Mapping, Geochronologic, Geochemical, And Petrologic Studies With Structural Analyses Of Ductile Fault Zones, Matthew Patrick Gatewood

Masters Theses

New field and laboratory data collected for the northeastern Inner Piedmont (IP) reveal the structure and composition of a portion of the southern Appalachian crystalline core, delimited the timing of orogenesis, and provide new insight into the nature of deep crustal processes during orogenesis. Previously recognized lithologies are continuous throughout the study area and comprise two distinct crystalline thrust sheets: the Marion and Brindle Creek thrust sheets, or eastern Tugaloo and western Cat Square terranes, respectively. Western IP Precambrian- Cambrian(?) metasedimentary lithologies and Ordovician metaigneous lithologies make up the Marion thrust sheet northwest of a Neoacadian suture, the Brindle Creek …

Quarternary Alluvial Deposition In The Upper Green River Valley, Kentucky, Juan Herrera

Masters Theses & Specialist Projects

This research describes the alluvial deposits and Quaternary geomorphic evolution of the Upper Green River in Kentucky by documenting the nature of flood plain sediments at two sites along the valley bottom of the Upper Green River between Mammoth Cave National Park and Green River Lake. Field methods employed included stratigraphic descriptions of bank exposures and borings obtained in flood plain surfaces, along with textural and radiocarbon analysis of sediment samples. Sediment samples from boreholes and bank exposures in two study sites (Pitman Creek confluence, -PCC- and Upper Green River Biological Preserve -UGRBP-) were collected and sieved to determine grain …

Factors Influencing Persistence Of Fecal Bacteroides In Stream Water, Alyssa K. Bell

Masters Theses

Fecal contamination leads to increased risk of exposure to enteric pathogens in aquatic environments used for drinking water, recreation, and commercial shellfishing. Current indicators of fecal contamination recommended by the EPA such as E. coli and enterococcus can fall short of meeting ideal indicator criteria by having widely-varying persistence in the environment, reproducing in the environment, occurring in the gut in low and variable concentrations, and requiring time-consuming assays. Furthermore, both these indicators lack the degree of host specificity needed for use in identifying sources of fecal contamination, which is an important tool for identifying and reducing fecal inputs to …