Geology Commons^™

History And Evaluation Of National-Scale Geochemical Data Sets For The United States, David B. Smith, Steven M. Smith, John D. Horton

United States Geological Survey: Staff Publications

Six national-scale, or near national-scale, geochemical data sets for soils or stream sediments exist for the United States. The earliest of these, here termed the ‘Shacklette’ data set, was generated by a U.S. Geological Survey (USGS) project conducted from 1961 to 1975. This project used soil collected from a depth of about 20 cm as the sampling medium at 1323 sites throughout the conterminous U.S. The National Uranium Resource Evaluation Hydrogeochemical and Stream Sediment Reconnaissance (NUREHSSR) Program of the U.S. Department of Energy was conducted from 1975 to 1984 and collected either stream sediments, lake sediments, or soils at more …

Remote Sensing Of Evapotranspiration For Operational Drought Monitoring Using Principles Of Water And Energy Balance, Gabriel B. Senay, Stefanie Bohms, James P. Verdin

United States Geological Survey: Staff Publications

Evapotranspiration (ET) is an important component of the hydrologic budget because it reflects the exchange of mass and energy between the soil–water–vegetation system and the atmosphere. Prevailing weather conditions influence potential or reference ET through variables such as radiation, temperature, wind, and relativity humidity. In addition to these weather variables, actual ET (ET_a) is also affected by land cover type and condition, as well as soil moisture. The dependence of ET_a on land cover and soil moisture, and its direct relationship with carbon dioxide assimilation in plants, makes it an important variable for monitoring drought, crop yield, …

Development And Application Of Methods Used To Source Prehistoric Southwestern Maize: A Review, Larry Benson

United States Geological Survey: Staff Publications

Archaeological cobs free of mineral contaminants should be used to source the soils in which they were grown. Mineral contaminants often contain much higher concentrations of metals than vegetal materials and can alter a cob’s apparent metal and heavy-isotope content. Cleaning a cob via immersion in an acid solution for more than a few minutes will result in the incongruent and sometimes complete leaching of metals, including strontium (Sr), from the cob. When using ⁸⁷Sr/⁸⁶Sr to determine the location of potential agriculture fields, it is best to either integrate several depth-integrated soil samples or to integrate several …

On Thinning Of Chains In Mcmc, William A. Link, Mitchell J. Eaton

United States Geological Survey: Staff Publications

1. Markov chain Monte Carlo (MCMC) is a simulation technique that has revolutionised the analysis of ecological data, allowing the fitting of complex models in a Bayesian framework. Since 2001, there have been nearly 200 papers using MCMC in publications of the Ecological Society of America and the British Ecological Society, including more than 75 in the journal Ecology and 35 in the Journal of Applied Ecology.

2. We have noted that many authors routinely ‘thin’ their simulations, discarding all but every kth sampled value; of the studies we surveyed with details on MCMC implementation, 40% reported thinning.

3. Thinning …

Spatially Explicit Models For Inference About Density In Unmarked Or Partially Marked Populations, Richard B. Chandler, J. Andrew Royle

United States Geological Survey: Staff Publications

Recently developed spatial capture-recapture (SCR) models represent a major advance over traditional capture-recapture (CR) models because they yield explicit estimates of animal density instead of population size within an unknown area. Futhermore, unlike nonspatial CR methods, SCR models account for heterogeneity in capture probability arising from the juxtaposition of animal activity centers and sample locations. Although the utility of SCR methods is gaining recognition, the requirement that all individuals can be uniquely identified exludes their use in many contexts. In this paper, we develop models for situations in which individual recognition is not possible, thereby allowing SCR concepts to be …

On Thinning Of Chains In Mcmc, William A. Link, Mitchell J. Eaton

United States Geological Survey: Staff Publications

1. Markov chain Monte Carlo (MCMC) is a simulation technique that has revolutionised the analysis of ecological data, allowing the fitting of complex models in a Bayesian framework. Since 2001, there have been nearly 200 papers using MCMC in publications of the Ecological Society of America and the British Ecological Society, including more than 75 in the journal Ecology and 35 in the Journal of Applied Ecology.

2. We have noted that many authors routinely ‘thin’ their simulations, discarding all but every kth sampled value; of the studies we surveyed with details on MCMC implementation, 40% reported thinning.

3. Thinning …

Sea-Level History During The Last Interglacial Complex On San Nicolas Island, California: Implications For Glacial Isostatic Adjustment Processes, Paleozoogeography And Tectonics, Daniel R. Muhs, Kathleen R. Simmons, R. Randall Schumann, Lindsey T. Groves, Jerry X. Mitrovica, Deanna Laurel

United States Geological Survey: Staff Publications

San Nicolas Island, California has one of the best records of fossiliferous Quaternary marine terraces in North America, with at least fourteen terraces rising to an elevation of ~270 m above present-day sea level. In our studies of the lowest terraces, we identified platforms at 38–36 m (terrace 2a), 33–28 m (terrace 2b), and 13–8 m (terrace 1). Uranium-series dating of solitary corals from these terraces yields three clusters of ages: ~120 ka on terrace 2a (marine isotope stage [MIS] 5.5), ~120 and ~100 ka on terrace 2b (MIS 5.5 and 5.3), and ~80 ka (MIS 5.1) on terrace 1.We …

Tectonic Influences On The Preservation Of Marine Terraces: Old And New Evidence From Santa Catalina Island, California, R. Randall Schumann, Scott A. Minor, Daniel R. Muhs, Lindsey T. Groves, John P. Mcgeehan

United States Geological Survey: Staff Publications

The California Channel Islands contain some of the best geologic records of past climate and sea-level changes, recorded in uplifted, fossil-bearing marine terrace deposits. Among the eight California Channel Islands and the nearby Palos Verdes Hills, only Santa Catalina Island does not exhibit prominent emergent marine terraces, though the same terrace-forming processes that acted on the other Channel Islands must also have occurred on Santa Catalina. We re-evaluated previous researchers' field evidence and examined new topographic, bathymetric, and stream-profile data in order to find possible explanations for the lack of obvious marine terrace landforms or deposits on the island today. …

Spring Migration Of Mallards From Arkansas As Determined By Satellite Telemetry, David George Krementz, Kwasi Asante, Luke W. Naylor

United States Geological Survey: Staff Publications

We used satellite telemetry to document spring migration phenology, routes, stopover regions, and nesting sites of mallards Anas platyrhynchos marked in Arkansas during the winters of 2004–2007. Of the 143 marked mallards that migrated from Arkansas, they did so, on average, by mid-March. Mallards flew over the Missouri Ozarks and 42% made an initial stopover in Missouri, where they used areas that had larger rivers (Mississippi River, Missouri River) embedded in an agricultural landscape. From this stopover region they either migrated directly to the Prairie Pothole Region (PPR) or they migrated north to Minnesota where they either moved next to …

Assessing Flood Inundation Mapping With The Use Of A Dem And Gis Along The Missouri River At Sioux City, Iowa, Kathryn A. Pfaffle

Department of Environmental Studies: Undergraduate Student Theses

There are various methods that are used to predict flood inundation. The U.S. Army Corps of Engineers provided inundation maps for the 2011 Missouri River flood event that did not utilized aerial photo imagery. This study assesses the suitability of using a digital elevation model (DEM) in combination with aerial photo imagery within a geographic information system to predict flood inundation mapping along the Missouri River in Sioux City, Iowa. GPS data was collected during the height of this flood event in order to validate the positional accuracy of the DEM. Using the GPS receiver’s accuracy standards to determine the …

Homestead National Monument Of America, Geologic Resources Inventory Report, J. Graham

United States National Park Service: Publications

Executive Summary

This report accompanies the digital geologic map data for Homestead National Monument of America in Nebraska, produced by the Geologic Resources Division in collaboration with its partners. It contains information relevant to resource management and scientific research. This document incorporates preexisting geologic information and does not include new data or additional fieldwork.

Established as a memorial to pioneer life and the Homestead Act of 1862, Homestead National Monument of America preserves approximately 92 ha (228 acres) of terraced grassland and riparian, floodplain environments. Included in the monument are about 40 ha (100 acres) of restored tallgrass prairie and …

Using Electrical Resistivity Imaging To Map Saline Groundwater And Subaqueous Spring Discharge: An Example From The Saline Wetlands Of Eastern Nebraska, Bridget B. Kelly

Department of Earth and Atmospheric Sciences: Dissertations, Theses, and Student Research

In order to better understand saline groundwater distribution and discharge dynamics within the saline wetlands of eastern Nebraska, electrical resistivity data were collected at three wetland sites within the Little Salt Creek Watershed. Electrical resistivity imaging (ERI) can provide an expanded understanding of saline groundwater distribution through the acquisition of a large number of resistivity measurements collected at the surface; upon inversion, the distribution of resistivity can be displayed in cross-section and subsurface processes serving to control salinity can be inferred. In recent years, several studies have used conventional methods of characterizing groundwater flow within the saline wetlands. These point …

The Application Of Biostratigraphy And Paleoecology At Southern Ocean Drill Sites To Resolve Early To Middle Miocene Paleoclimatic Events, Ryan Farmer

Department of Earth and Atmospheric Sciences: Dissertations, Theses, and Student Research

The diatom biostratigraphy and paleoceanography of Ocean Drilling Program (ODP) Site 744 on the Southern Kerguelen Plateau, southern Indian Ocean are documented for the early to middle Miocene to improve chronostratigraphic age control for the Southern Ocean and Antarctic region. Paleoenvironmental fluctuations in the Southern Ocean are inferred from changes in fossil diatom abundance, preservation, and assemblage composition. A robust, new age model for Holes 744A and 744B is constructed using Constrained Optimization (CONOP) model ages for diatom biostratigraphic datum levels and new magnetic polarity data, which enables assessment of a nearly continuous record of paleoenvironmental change from ~20.25 to …

Stratigraphic Analysis And Regional Correlation Of Isolated, Top-Truncated Shallow Marine Sandstone Bodies Within The Upper Cretaceous Frontier Formation, Bighorn And Washakie Counties, Wyoming, Andrew J. Hutsky

Department of Earth and Atmospheric Sciences: Dissertations, Theses, and Student Research

A detailed sedimentologic and stratigraphic analysis facilitated interpretations of depositional environment, sequence stratigraphy, and sandstone body geometry for isolated, top-truncated, shallow marine sandstone bodies of the Upper Cretaceous (Cenomanian-Turonian) Frontier Formation, northeast Bighorn Basin, Wyoming. The Frontier Formation interval is ~160 meters thick and was deposited as a complex clastic wedge that prograded into Cretaceous Western Interior Seaway (KWIS). The vertical interval comprises several incomplete coarsening-upward cycles, composed of basal offshore marine and prodeltaic shales progressively overlain by proximal shallow marine/fluvial facies that are capped by pebble lags. Sedimentary structures, vertical stacking patterns, and lateral variability within these cycles record …

Identifying Changes In Climatic Trends And The Fingerprints Of Landuse And Landcover Changes In The High Plains Of The Usa, Denis Mutiibwa

Department of Agricultural and Biological Systems Engineering: Dissertations, Theses, and Student Research

Human activities such as conversion of natural ecosystem to croplands and urban-centers, deforestation and afforestation impact biophysical properties of land surface such as albedo, energy balance, and surface roughness. Alterations in these properties affect the heat and moisture exchanges between the land surface and atmospheric boundary layer. The objectives of this research were; (i) to quantitatively identify the High plains’ regional climate change in temperatures over the period 1895 to 2006, (ii) detect the signatures of anthropogenic forcing of LULC changes on the regional climate change of the High Plains, and (iii) examine the trends in evolving regional latent heat …

New Stable Isotope Record Of Paleoecological Change In The Late Neogene Of The Western Great Plains From Enamel In Large Mammals, Zachary Kita

Department of Earth and Atmospheric Sciences: Dissertations, Theses, and Student Research

An expansion of C₄ grasslands occurred between 6 and 8 million years ago in the Great Plains of North America, as evidenced by a marked shift to more ¹³C-enriched carbon isotope compositions from large fossil mammal tooth enamel and paleosol carbonates. Prior to this expansion, habitats were comprised of exclusively C₃ vegetation. To explore this problem I present a compilation of bulk stable carbon (δ¹³C) and oxygen (δ¹⁸O) isotope values from a variety of large mammals from 6 localities that span from the late Clarendonian to the late Blancan in Nebraska. As expected, …

Taxonomic Composition, Paleoecology And Biostratigraphy Of Late Cretaceous Diatoms From Devon Island, Nunavut, Canadian High Arctic, Jakub Witkowski, David M. Harwood, Karen Chin

Department of Earth and Atmospheric Sciences: Faculty Publications

Upper Cretaceous sediments of the Kanguk Formation exposed in Eidsbotn and Viks Fiord grabens on Devon Island, Nunavut, Canadian High Arctic, yielded 91 fossil marine diatom species and varieties (including indeterminate taxa), representing 41 genera. Excellent preservation of the assemblages was aided by shallow burial, protection in down­faulted linear grabens, and the presence of abundant volcanic material. Planktonic species and resting spores com­prise nearly 70% of the diatom assemblage, and provided abundant food resources for the Late Cretaceous Arctic eco­system. Deposition of the approximately 225 m-thick stratigraphic sequence was predominantly in a shallow marine neritic setting, with an upward progression …

Secretive Marsh Bird Species Co-Occurrences And Habitat Associations Across The Midwest, Usa, Jason R. Bolenbaugh, Sarah E. Lehnen, David G. Krementz

United States Geological Survey: Staff Publications

Because secretive marsh birds are difficult to detect, population status and habitat use for these birds are not well known. We conducted repeated surveys for secretive marsh birds across 264 sites in the Upper Mississippi River and Great Lakes Joint Venture region to estimate abundance, occupancy, and detection probabilities during the 2008 and 2009 breeding seasons. We identified species groups based on observed species co-occurrences. Two species, least bittern Ixobrychus exilis and American bittern Botaurus lentiginosus, co-occurred with other species less often than expected by chance, and two species groups, rails (Virginia rail Rallus limicola and sora Porzana carolina) and …

Rapid Wetland Expansion During European Settlement And Its Implication For Marsh Survival Under Modern Sediment Delivery Rates, Matthew L. Kirwan, A. Brad Murray, Jeffrey P. Donnelly, D. Reide Corbett

United States Geological Survey: Staff Publications

Fluctuations in sea-level rise rates are thought to dominate the formation and evolution of coastal wetlands. Here we demonstrate a contrasting scenario in which land-use–related changes in sediment delivery rates drive the formation of expansive marshland, and vegetation feedbacks maintain their morphology despite recent sediment supply reduction. Stratigraphic analysis and radiocarbon dating in the Plum Island Estuary (Massachusetts, United States) suggest that salt marshes expanded rapidly during the eighteenth and nineteenth centuries due to increased rates of sediment delivery following deforestation associated with European settlement. Numerical modeling coupled with the stratigraphic observations suggests that existing marshland could survive, but not …

Extent Of Gully Erosion In An Agricultural Field In Northeastern Nebraska At Section 35 Township 29 North Range 1 West In Cedar County, Crystal Starkel

Department of Environmental Studies: Undergraduate Student Theses

My thesis project examined a gully within Section 35 Township 29 North Range 1 West. This gully has been noticed for five years and has grown substantially in those five years. The extent and causes of gully erosion were examined by considering the soil, the climate, the land management history, by measuring the gully physically, by using GIS, and by using an economic support tool was estimate soil loss. Appropriate recommendations were developed to reduce gully erosion.

Effects Of Rodent Species, Seed Species, And Predator Cues On Seed Fate, Kelly J. Sivy, Steven M. Ostoja, Eugene W. Schupp, Susan Durham

United States Geological Survey: Staff Publications

Seed selection, removal and subsequent management by granivorous animals is thought to be a complex interaction of factors including qualities of the seeds themselves (e.g., seed size, nutritional quality) and features of the local habitat (e.g. perceived predator risk). At the same time, differential seed selection and dispersal is thought to have profound effects on seed fate and potentially vegetation dynamics. In a feeding arena, we tested whether rodent species, seed species, and indirect and direct predation cues influence seed selection and handling behaviors (e.g., scatter hoarding versus larder hoarding) of two heteromyid rodents, Ord’s kangaroo rat (Dipodomys ordii) and …

Secondary Minerals From Extrapedogenic Per Latus Acidic Weathering Environments At Geomorphic Edges, Eastern Nebraska, Usa, Robert Matthew Joeckel, K.D. Wally, B.J. Ang Clement, P.R. Hanson, J.S. Dillon, S.K. Wilson

Conservation and Survey Division: Faculty and Staff Publications

Acidic weathering of the sulfidic Upper Cretaceous Carlile and Pierre Shales in Nebraska has led to the precipitation of the Al sulfate–hydroxide minerals aluminite, alunite, “basaluminite”/felsöbányaite (e.g.,), the aluminum hydroxides gibbsite and bayerite, and the rare Al phosphate hydroxide vashegyite. Kaolinite has also been produced as a result of this acidic weathering. These minerals do not appear as neoformed constituents in any extant soils in the region, and their existence underscores the ability of pyrite oxidation to produce major changes in mineralogy on a Holocene to Recent time scale. Jarosite, hydronium jarosite, gypsum, halotrichite, and melanterite also appear as secondary …

Estimating Age From Recapture Data: Integrating Incremental Growth Measures With Ancillary Data To Infer Age-At-Length, Mitchell J. Eaton, William A. Link

United States Geological Survey: Staff Publications

Estimating the age of individuals in wild populations can be of fundamental importance for answering ecological questions, modeling population demographics, and managing exploited or threatened species. Significant effort has been devoted to determining age through the use of growth annuli, secondary physical characteristics related to age, and growth models. Many species, however, either do not exhibit physical characteristics useful for independent age validation or are too rare to justify sacrificing a large number of individuals to establish the relationship between size and age. Length-at-age models are well represented in the fisheries and other wildlife management literature. Many of these models …

Demographic Responses Of Least Terns And Piping Plovers To The 2011 Missouri River Flood—A Large-Scale Case Study, Michael J. Anteau, Mark H. Sherfy, Terry L. Shaffer, Rose J. Swift, Dustin L. Toy, Colin M. Dovichin

United States Geological Survey: Publications

2011 led to substantial changes in abundance and distribution of unvegetated sand habitat. This river system is a major component of the breeding range for interior Least terns (Sternula antillarum; “terns”) and piping plovers (Charadrius melodus; “plovers”), both of which are Federally listed ground-nesting birds that prefer open, unvegetated sand and gravel nesting substrates on sandbars and shorelines. The 2011 flood inundated essentially all tern and plover nesting habitat during 2011, but it had potential to generate post-flood habitat conditions that favored use by terns and plovers in subsequent years. We compared several tern and plover demographic parameters during the …

The Role Of Demographic Compensation Theory In Incidental Take Assessments For Endangered Species, Conor P. Mcgowan, Mark R. Ryan, Michael C. Runge, Joshua J. Millspaugh, Jean Fitts Cochrane

United States Geological Survey: Staff Publications

Many endangered species laws provide exceptions to legislated prohibitions through incidental take provisions as long as take is the result of unintended consequences of an otherwise legal activity. These allowances presumably invoke the theory of demographic compensation, commonly applied to harvested species, by allowing limited harm as long as the probability of the species’ survival or recovery is not reduced appreciably. Demographic compensation requires some density-dependent limits on survival or reproduction in a species’ annual cycle that can be alleviated through incidental take. Using a population model for piping plovers in the Great Plains, we found that when the population …

Selenium In Birds, Harry M. Ohlendorf, Gary H. Heinz

United States Geological Survey: Staff Publications

Selenium (Se) is a metalloid trace element that birds and other wildlife need in small amounts for good health. The main purpose of this chapter is to interpret tissue concentrations of Se. However, because food is the main source of Se accumulation for birds and other wildlife, and because dietary concentrations for effects on bird reproduction have been reported, we also provide interpretive information on Se in the diet.

Se deficiencies in domestic poultry and livestock occur in some parts of the world and must be corrected by additions of Se to the diet. However, the range of dietary concentrations …

History Of Wildlife Toxicology And The Interpretation Of Contaminant Concentrations In Tissues, Barnett A. Rattner, Anton M. Scheuhammer, John E. Ellott

United States Geological Survey: Staff Publications

The detection and interpretation of contaminants in tissues of wildlife belongs to the field of toxicology, a scientific discipline with a long, intriguing, and illustrious history (reviewed by Hayes 1991, Gallo 2001, Gilbert and Hayes 2006, Wax 2006). We review its history briefly, to provide a context for understanding the use of tissue residues in toxicology, and to explain how their use has developed over time. Because so much work has been conducted on mercury, and dioxins and polychlorinated biphenyls (PCBs), separate case histories are included that describe the evolution of the use of tissue concentrations to assess exposure and …

The Rise And Fall Of Lake Bonneville Between 45 And 10.5 Ka, L.V. Benson, S.P. Lund, J.P. Smoot, D.E. Rhode, R.J. Spencer, K.L. Verosub, L.A. Louderback, C.A. Johnson, R.O. Rye, R.M. Negrini

United States Geological Survey: Staff Publications

A sediment core taken from the western edge of the Bonneville Basin has provided high-resolution proxy records of relative lake-size change for the period 45.1-10.5 calendar ka (hereafter ka). Age control was provided by a paleomagnetic secular variation (PSV)-based age model for Blue Lake core BL04-4. Continuous records of δ¹⁸O and total inorganic carbon (TIC) generally match an earlier lake-level envelope based on outcrops and geomorphic features, but with differences in the timing of some hydrologic events/states. The Stansbury Oscillation was found to consist of two oscillations centered on 25 and 24 ka. Lake Bonneville appears to have …

Tapeworms Of Elasmobranchs, Part Iii: A Monograph On The Phyllobothriidae (Platyhelminthes, Cestoda), Timothy R. Ruhnke

Bulletin of the University of Nebraska State Museum (1924–2023)

This monograph aims to provide information on the taxonomic status of all genera associated with the tetraphyllidean family Phyllobothriidae. Full treatments of the three valid species of the type genus, Phyllobothrium, in addition to the 47 valid species of Clistobothrium, Crossobothrium, Marsupiobothrium, Monorygma, Nandocestus, Orectolobicestus, Orygmatobothrium, Paraorygmatobothrium, Ruhnkecestus, and Scyphophyllidium are provided, as is a taxonomic history of the family. Of the valid genera historically associated with the family, only Phyllobothrium is considered to be an unambiguous member of the family. The genera Bibursibothrium, Calyptrobothrium, Cardiobothrium, Clistobothrium, Crossobothrium, Doliobothrium, Flexibothrium, Marsupiobothrium, Monorygma, Nandocestus, Orectolobicestus, Orygmatobothrium, Paraorygmatobothrium, Ruhnkecestus, Scyphophyllidium …

Adaptive Resource Management And The Value Of Information, Byron K. Williams, Mitchell J. Eaton, David R. Breininger

United States Geological Survey: Staff Publications

The value of information is a general and broadly applicable concept that has been used for several decades to aid in making decisions in the face of uncertainty. Yet there are relatively few examples of its use in ecology and natural resources management, and almost none that are framed in terms of the future impacts of management decisions. In this paper we discuss the value of information in a context of adaptive management, in which actions are taken sequentially over a time frame and both future resource conditions and residual uncertainties about resource responses are taken into account. Our objective …