Geology Commons^™

Predictive Models For Escherichia Coli Concentrations At Inland Lake Beaches And Relationship Of Model Variables To Pathogen Detection, Donna S. Francy, Erin A. Stelzer, Joseph W. Duris, Amie M. G. Brady, John H. Harrison, Heather E. Johnson, Michael W. Ware

United States Geological Survey: Staff Publications

Predictive models, based on environmental and water quality variables, have been used to improve the timeliness and accuracy of recreational water quality assessments, but their effectiveness has not been studied in inland waters. Sampling at eight inland recreational lakes in Ohio was done in order to investigate using predictive models for Escherichia coli and to understand the links between E. coli concentrations, predictive variables, and pathogens. Based upon results from 21 beach sites, models were developed for 13 sites, and the most predictive variables were rainfall, wind direction and speed, turbidity, and water temperature. Models were not developed at sites …

The Malthusian–Darwinian Dynamic And The Trajectory Of Civilization, Jeffrey C. Nekola, Craig D. Allen, James H. Brown, Joseph R. Burger, Ana D. Davidson, Trevor S. Fristoe, Marcus J. Hamilton, Sean T. Hammond, Astrid Kodric-Brown, Norman Mercado-Silva, Jordan G. Okie

United States Geological Survey: Staff Publications

Two interacting forces influence all populations: the Malthusian dynamic of exponential growth until resource limits are reached, and the Darwinian dynamic of innovation and adaptation to circumvent these limits through biological and/or cultural evolution. The specific manifestations of these forces in modern human society provide an important context for determining how humans can establish a sustainable relationship with the finite Earth.

Reproductive Health Of Yellow Perch Perca Flavescens In Selected Tributaries Of The Chesapeake Bay, Vicki S. Blazer, Alfred E. Pinkney, Jill A. Jenkins, Luke R. Iwanowicz, Steven Minkkinen, Rassa O. Draugelis-Dale, James H. Uphoff

United States Geological Survey: Staff Publications

Reduced recruitment of yellow perch has been noted for a number of years in certain urbanized watersheds (South and Severn Rivers) of the Chesapeake Bay. Other rapidly developing watersheds such as Mattawoman Creek are more recently showing evidence of reduced recruitment of anadromous fishes. In this study, we used a battery of biomarkers to better document the reproductive health of adult yellow perch collected during spring spawning in 2007–2009. Perch were collected in the South and Severn Rivers, Mattawoman Creek and the less developed Choptank and Allen's Fresh watersheds for comparison. Gonadosomatic indices, plasma reproductive hormone concentrations, plasma vitellogenin concentrations …

Performance Of Human Fecal Anaerobe-Associated Pcr-Based Assays In A Multi-Laboratory Method Evaluation Study, Blythe A. Layton, Yiping Cao, Darcy L. Ebentier, Kaitlyn Hanley, Elisenda Balleste, Joao Brandao, Muruleedhara Byappanahalli, Reagan Converse, Andreas H. Farnleitner, Jennifer Gentry-Shields, Maribeth L. Gidley, Michele Gourmelon, Chang Soo Lee, Jiyoung Lee, Solen Lozach, Tania Madi, Wim G. Meijer, Rachel Noble, Lindsay Peed, Georg H. Reischer, Raquel Rodrigues, Joan B. Rose, Alexander Schriewer, Chris Sinigalliano, Sangeetha Srinivasan, Jill Stewart, Laurie C. Van De Werfhorst, Dan Wang, Richard Whitman, Stefan Wuertz, Jenny Jay, Patricia A. Holden, Alexandria B. Boehm, Orin Shanks, John F. Griffith

United States Geological Survey: Staff Publications

A number of PCR-based methods for detecting human fecal material in environmental waters have been developed over the past decade, but these methods have rarely received independent comparative testing in large multi-laboratory studies. Here, we evaluated ten of these methods (BacH, BacHum-UCD, Bacteroides thetaiotaomicron (BtH), BsteriF1, gyrB, HF183 endpoint, HF183 SYBR, HF183 Taqman^®, HumM2, and Methanobrevibacter smithii nifH (Mnif)) using 64 blind samples prepared in one laboratory. The blind samples contained either one or two fecal sources from human, wastewater or non-human sources. The assay results were assessed for presence/absence of the human markers and also quantitatively while …

Human-Caused Mortality Influences Spatial Population Dynamics: Pumas In Landscapes With Varying Mortality Risks, Jesse R. Newby, L. Scott Mills, Toni K. Ruth, Daniel H. Pletscher, Michael S. Mitchell, Howard B. Quigley, Kerry M. Murphy, Rich Desimone

United States Geological Survey: Staff Publications

An understanding of how stressors affect dispersal attributes and the contribution of local populations to multi-population dynamics are of immediate value to basic and applied ecology. Puma (Puma concolor) populations are expected to be influenced by inter-population movements and susceptible to human induced source–sink dynamics. Using long-term datasets we quantified the contribution of two puma populations to operationally define them as sources or sinks. The puma population in the Northern Greater Yellowstone Ecosystem (NGYE) was largely insulated from human-induced mortality by Yellowstone National Park. Pumas in the western Montana Garnet Mountain system were exposed to greater human-induced mortality, …

A Causal Examination Of The Effects Of Confounding Factors On Multimetric Indices, Donald R. Schoolmaster Jr., James B. Grace, E. William Schweiger, Brian R. Mitchell, Glenn R. Guntenspergen

United States Geological Survey: Staff Publications

The development of multimetric indices (MMIs) as a means of providing integrative measures of ecosystem condition is becoming widespread. An increasingly recognized problem for the interpretability of MMIs is controlling for the potentially confounding influences of environmental covariates. Most common approaches to handling covariates are based on simple notions of statistical control, leaving the causal implications of covariates and their adjustment unstated. In this paper, we use graphical models to examine some of the potential impacts of environmental covariates on the observed signals between human disturbance and potential response metrics. Using simulations based on various causal networks, we show how …

An Algorithmic And Information-Theoretic Approach To Multimetric Index Construction, Donald R. Schoolmaster Jr., James B. Grace, E. William Schweiger, Glenn R. Guntenspergen, Brian R. Mitchell, Kathryn M. Miller, Amanda M. Little

United States Geological Survey: Staff Publications

The use of multimetric indices (MMIs), such as the widely used index of biological integrity (IBI), to measure, track, summarize and infer the overall impact of human disturbance on biological communities has been steadily growing in recent years. Initially, MMIs were developed for aquatic communities using preselected biological metrics as indicators of system integrity. As interest in these bioassessment tools has grown, so have the types of biological systems to which they are applied. For many ecosystem types the appropriate biological metrics to use as measures of biological integrity are not known a priori. As a result, a variety of …

Extending Airborne Electromagnetic Surveys For Regional Active Layer And Permafrost Mapping With Remote Sensing And Ancillary Data, Yukon Flats Ecoregion, Central Alaska, Neal J. Pastick, M. Torre Jorgenson, Bruce K. Wylie, Burke J. Minsley, Lei Ji, Michelle A. Walvoord, Bruce D. Smith, Jared D. Abraham, Joshua R. Rose

United States Geological Survey: Staff Publications

Machine-learning regression tree models were used to extrapolate airborne electromagnetic resistivity data collected along flight lines in the Yukon Flats Ecoregion, central Alaska, for regional mapping of permafrost. This method of extrapolation (r = 0.86) used subsurface resistivity, Landsat Thematic Mapper (TM) at-sensor reflectance, thermal, TM-derived spectral indices, digital elevation models and other relevant spatial data to estimate near-surface (0–2.6-m depth) resistivity at 30-m resolution. A piecewise regression model (r = 0.82) and a presence/absence decision tree classification (accuracy of 87%) were used to estimate active-layer thickness (ALT) (< 101 cm) and the probability of near-surface (up to 123-cm depth) permafrost occurrence from field data, modelled near-surface (0–2.6m) resistivity, and other relevant remote sensing and map data. At site scale, the predicted ALTs were similar to those previously observed for different vegetation types. At the landscape scale, the predicted ALTs tended to be thinner on higher-elevation loess deposits than on low-lying alluvial and sand sheet deposits of the Yukon Flats. The ALT and permafrost maps provide a baseline for future permafrost monitoring, serve as inputs for modelling hydrological and carbon cycles at local to regional scales, and offer insight into the ALT response to fire and thaw processes. Published 2013. This article is a U.S. Government work and is in the public domain in the USA.

A Review Of Environmental Impacts Of Salts From Produced Waters On Aquatic Resources, Aida M. Farag, David D. Harper

United States Geological Survey: Staff Publications

Salts are frequently amajor constituent ofwastewaters produced during oil and gas production. These produced waters or brines must be treated and/or disposed and provide a daily challenge for operators and resourcemanagers. Some elements of salts are regulated with water quality criteria established for the protection of aquatic wildlife, e.g. chloride (Cl⁻), which has an acute standard of 860 mg/L and a chronic standard of 230 mg/L. However, data for establishing such standards has only recently been studied for other components of produced water, such as bicarbonate (HCO3 ⁻), which has acute median lethal concentrations (LC50s) ranging from …

Loess Origin, Transport, And Deposition Over The Past 10,000 Years, Wrangell-St. Elias National Park, Alaska, Daniel R. Muhs, James R. Budahn, John P. Mcgeehin, E. Arthur Bettis Iii, Gary Skipp, James B. Paces, Elisabeth A. Wheeler

United States Geological Survey: Staff Publications

Contemporary glaciogenic dust has not received much attention, because most research has been on glaciogenic dust of the last glacial period or non-glaciogenic dust of the present interglacial period. Nevertheless, dust from modern glaciogenic sources may be important for Fe inputs to primary producers in the ocean. Adjacent to the subarctic Pacific Ocean, we studied a loess section near Chitina, Alaska along the Copper River in Wrangell-St. Elias National Park, where dust has been accumulating over the past ~10,000 years. Mass accumulation rates for the fine-grained (<20 >µm) fraction of this loess section are among the highest reported for the …

Chronology And Provenance Of Last-Glacial (Peoria) Loess In Western Iowa And Paleoclimatic Implications, Daniel R. Muhs, E. Arthur Bettis Iii, Helen M. Roberts, Stephen S. Harlan, James B. Paces, Richard L. Reynolds

United States Geological Survey: Staff Publications

Geologic archives show that the Earth was dustier during the last glacial period. One model suggests that increased gustiness (stronger, more frequent winds) enhanced dustiness. We tested this at Loveland, Iowa, one of the thickest deposits of last-glacial-age (Peoria) loess in the world. Based on K/Rb and Ba/Rb, loess was derived not only from glaciogenic sources of the Missouri River, but also distal loess from non-glacial sources in Nebraska. Optically stimulated luminescence (OSL) ages provide the first detailed chronology of Peoria Loess at Loveland. Deposition began after ~27 ka and continued until ~17 ka. OSL ages also indicate that mass …

Origin Of The Sinai-Negev Erg, Egypt And Israel: Mineralogical And Geochemical Evidence For The Importance Of The Nile And Sea Level History, Daniel R. Muhs, Joel Roskin, Haim Tsoar, Gary Skipp, James Budahn, Amihai Sneh, Naomi Porat, Jean-Daniel Stanley, Itzhak Katra, Dan G. Blumberg

United States Geological Survey: Staff Publications

The Sinai-Negev erg occupies an area of 13,000 km² in the deserts of Egypt and Israel. Aeolian sand of this erg has been proposed to be derived from the Nile Delta, but empirical data supporting this view are lacking. An alternative source sediment is sand from the large Wadi El Arish drainage system in central and northern Sinai. Mineralogy of the Negev and Sinai dunes shows that they are high in quartz, with much smaller amounts of K-feldspar and plagioclase. Both Nile Delta sands and Sinai wadi sands, upstream of the dunes, also have high amounts of quartz relative …

Toxic Exposure Of Songbirds To Lead In The Southeast Missouri Lead Mining District, W. Nelson Beyer, J. Christian Franson, John B. French, Thomas May, Barnett A. Rattner, Valerie I. Shearn-Bochsler, Sarah E. Warner, John Weber, David Mosby

United States Geological Survey: Staff Publications

Mining and smelting in the Southeast Missouri Lead Mining District has caused widespread contamination of soils with lead (Pb) and other metals. Soils from three study sites sampled in the district contained from approximately 1,000–3,200 mg Pb/kg. Analyses of earthworms [33–4,600 mg Pb/kg dry weight (dw)] collected in the district showed likely high Pb exposure of songbirds preying on soil organisms. Mean tissue Pb concentrations in songbirds collected from the contaminated sites were greater (p < 0.05) than those in songbirds from reference sites by factors of 8 in blood, 13 in liver, and 23 in kidney. Ranges of Pb concentrations in livers (mg Pb/kg dw) were as follows: northern cardinal (Cardinalis cardinalis) = 0.11–3.0 (reference) and 1.3–30 (contaminated) and American robin (Turdus migratorius) = 0.43–8.5 (reference) and 7.6–72 (contaminated). Of 34 …

Comparative Embryotoxicity Of A Pentabrominated Diphenyl Ether Mixture To Common Terns (Sterna Hirundo) And American Kestrels (Falco Sparverius), Barnett A. Rattner, Rebecca S. Lazarus, Gary H. Heinz, Natalie K. Karouna-Renier, Sandra L. Schultz, Robert C. Hale

United States Geological Survey: Staff Publications

Concentrations of polybrominated diphenyl ethers (PBDEs) in Forster’s tern (Sterna forsteri) eggs from San Francisco Bay have been reported to range up to 63 µg g^-1 lipid weight. This value exceeds the lowest-observed-adverse-effect level (1.8 µg g^-1 egg wet weight; ~32 µg g^-1 lipid weight) reported in an embryotoxicity study with American kestrels (Falco sparverius). As a surrogate for Forster’s terns, common tern (Sterna hirundo) eggs were treated by air cell injection with corn oil vehicle (control) or a commercial penta-BDE formulation (DE-71) at nominal concentrations of 0.2, 2, and 20 µg g …

A Global Standard For Monitoring Coastal Wetland Vulnerability To Accelerated Sea-Level Rise, Edward L. Webb, Daniel A. Friess, Ken W. Krauss, Donald R. Cahoon, Glenn R. Guntenspergen, Jacob Phelps

United States Geological Survey: Staff Publications

Sea-level rise threatens coastal salt-marshes and mangrove forests around the world, and a key determinant of coastal wetland vulnerability is whether its surface elevation can keep pace with rising sea level. Globally, a large data gap exists because wetland surface and shallow subsurface processes remain unaccounted for by traditional vulnerability assessments using tide gauges. Moreover, those processes vary substantially across wetlands, so modelling platforms require relevant local data. The low-cost, simple, high-precision rod surface-elevation table–marker horizon (RSET-MH) method fills this critical data gap, can be paired with spatial data sets and modelling and is financially and technically accessible to every …

Use Of Nmr Logging To Obtain Estimates Of Hydraulic Conductivity In The High Plains Aquifer, Nebraska, Usa, Katherine Dlubac, Rosemary Knight, Yi-Qiao Song, Nate Bachman, Ben Grau, Jim Cannia, John Williams

United States Geological Survey: Staff Publications

Hydraulic conductivity (K) is one of the most important parameters of interest in groundwater applications because it quantifies the ease with which water can flow through an aquifer material. Hydraulic conductivity is typically measured by conducting aquifer tests or wellbore flow (WBF) logging. Of interest in our research is the use of proton nuclear magnetic resonance (NMR) logging to obtain information about water-filled porosity and pore space geometry, the combination of which can be used to estimate K. In this study, we acquired a suite of advanced geophysical logs, aquifer tests, WBF logs, and sidewall cores at the …

Spatially Explicit Models For Inference About Density In Unmarked Or Partially Marked Populations, Richard B. Chandler, J. Andrew Royle

United States Geological Survey: Staff Publications

Recently developed spatial capture-recapture (SCR) models represent a major advance over traditional capture-recapture (CR) models because they yield explicit estimates of animal density instead of population size within an unknown area. Furthermore, unlike non-spatial CR methods, SCR models account for heterogeneity in capture probability arising from the juxtaposition of animal activity centers and sample locations. Although the utility of SCR methods is gaining recognition, the requirement that all individuals can be uniquely identified excludes their use in many contexts. In this paper, we develop models for situations in which individual recognition is not possible, thereby allowing SCR concepts to be …

The Geologic Records Of Dust In The Quaternary, Daniel R. Muhs

United States Geological Survey: Staff Publications

Study of geologic records of dust composition, sources and deposition rates is important for understanding the role of dust in the overall planetary radiation balance, fertilization of organisms in the world’s oceans, nutrient additions to the terrestrial biosphere and soils, and for paleoclimatic reconstructions. Both glacial and non-glacial processes produce fine-grained particles that can be transported by the wind. Geologic records of dust flux occur in a number of depositional archives for sediments: (1) loess deposits; (2) lake sediments; (3) soils; (4) deep-ocean basins; and (5) ice sheets and smaller glaciers. These archives have several characteristics that make them highly …

Geol 440/840: Tectonics—A Peer Review Of Teaching Project Inquiry Portfolio, Caroline M. Burberry

UNL Faculty Course Portfolios

This document is a follow-up document to the Benchmark Portfolio for this course, created in 2012. It details the changes made to the course following the observations from the Benchmark Portfolio and demonstrates that discussion of the metacognitive issues surrounding critical thinking does have some effect on increasing student learning. The document concludes with changes which will be made to the 2014 iteration of the class, to continue this inquiry and improvement process.

Geol 106: Environmental Geology—A Peer Review Of Teaching Project Benchmark Portfolio, Leilani Arthurs

UNL Faculty Course Portfolios

The Peer Review of Teaching (PRT) program provides faculty members the environment, support, structure, and time to carefully think about how they teach a particular course. PRT benchmark portfolios are prepared as a part of this program to assist faculty members in reflecting on and documenting their instructional practices and the potential impact they have on student learning.

This benchmark portfolio targets the Spring 2013 semester of GEOL 106: Environmental Geology. It documents the course objectives that provided the foundation for the instructional approach, the course-level learning goals that defined what students should be able to do by the end …

Autumn Migration Of Mississippi Flyway Mallards As Determined By Satellite Telemetry, David George G. Krementz, Kwasi Asante, Luke W. Naylor

United States Geological Survey: Staff Publications

We used satellite telemetry to study autumn migration timing, routes, stopover duration, and final destinations of mallards Anas platyrhynchos captured the previous spring in Arkansas from 2004 to 2007. Of those mallards that still had functioning transmitters on September 15 (n = 55), the average date when autumn migration began was October 23 (SE = 2.62 d; range = September 17–December 7). For those mallards that stopped for .1 d during migration, the average stopover length was 15.4 d (SE = 1.47 d). Ten mallards migrated nonstop to wintering sites. The eastern Dakotas were a heavily utilized stopover area. The …

Applicability And Estimation Of Error For Determination Of Hydraulic Conductivity Values Based Upon Traditional Aquifer Test Methods For 2-D Groundwater Modeling, Timothy W. Freed Sr.

Department of Earth and Atmospheric Sciences: Dissertations, Theses, and Student Research

The Theis method and its derivative Cooper-Jacob method are commonly used for determining hydraulic conductivity (K) for aquifer studies using two-dimensional (2-D) groundwater modeling. Theis and derivative equations assume isotropic, homogeneous aquifers and horizontal flow. In nature, saturated permeable layers of an aquifer are often separated by less permeable layers or lenses, which commonly have K's that are lower by several orders of magnitude. The presence of such geologic features induces vertical flow during aquifer tests violating assumptions for Theis based methods. This study assesses the appropriateness and error of using Theis based equations to determine K for use in …

Geologic Observations Along The Steamboat Trace Trail, Markers 16-20, In The Vicinity Of Peru, Nemaha County, Nebraska (Including On The Indian Cave Sandstone), Robert F. Diffendal Jr.

Robert F. Diffendal, Jr., Publications

This section of the Steamboat Trace Trail from markers 16 through 20 (Figure 1) offers especially good examples of geologic features in this part of Nebraska (Figure 2). These include: The Missouri River, its valley, river cuts into the valley side, tributaries to the river, and flood control structures; Sites of active and potential landslides; Wind-deposited silts (called loess by geologists and soil scientists); Glacial deposits; Bedrock exposures of ancient sandstone, shale, conglomerate, and limestone; Fossils of ocean- and land-dwelling plants and animals; Coal deposits.

Catching Air - Those Magnificent Jumping Suwannee Sturgeons, Ken Sulak

United States Geological Survey: Staff Publications

It starts deep at the bottom of the dark silent river, three to four powerful tail beats and three sharp acoustic clicks. Then, a sudden upturn of the body and the fish explodes upward, 100 pounds going vertical, catching air, lots of air. A good jump can power a big fish, six to nine feet into the air. You have to be quick to get a photo, hang time is only about a second, but an accomplished jump by a big old Suwannee River Gulf Sturgeon is impressive; a magnificent display of power. The exit is almost vertical. The tail …

The Geologic Records Of Dust In The Quaternary, Daniel R. Muhs

United States Geological Survey: Staff Publications

Study of geologic records of dust composition, sources and deposition rates is important for understanding the role of dust in the overall planetary radiation balance, fertilization of organisms in the world’s oceans, nutrient additions to the terrestrial biosphere and soils, and for paleoclimatic reconstructions. Both glacial and non-glacial processes produce fine-grained particles that can be transported by the wind. Geologic records of dust flux occur in a number of depositional archives for sediments: (1) loess deposits; (2) lake sediments; (3) soils; (4) deep-ocean basins; and (5) ice sheets and smaller glaciers. These archives have several characteristics that make them highly …

Nebraska's Wetlands: Their Wildlife And Ecology, Paul A. Johnsgard

Conservation and Survey Division: Faculty and Staff Publications

1 An Overview of Nebraska's Wetlands

2 The Missouri Valley • Natural History Profiles of Some Missouri Valley Wetland Species • The Missouri Valley Wetlands

3 The Niobrara Valley Region • Natural History Profiles of Some Niobrara Valley Wetland Species • The Niobrara Valley Wetlands

4 The Platte Valley Region • Natural History Profiles of Some Platte Valley Wetland Species • The Central Platte Valley Wetlands • The North Platte Valley Wetlands

5 Other River Valley Wetlands • Natural History Profiles of Some Typical Riverine Species • The Elkhorn Valley Wetlands • The Loup Valley Wetlands • The Republican Valley …

4th International Union Of Soil Sciences Soil Classification Conference Field Tour Guidebook

Conservation and Survey Division: Faculty and Staff Publications

No abstract provided.

North Central Region Soil Survey Conference Field Tour

Conservation and Survey Division: Faculty and Staff Publications

No abstract provided.

High-Resolution Correlation Of The Upper Cretaceous Stratigraphy Between The Book Cliffs And The Western Henry Mountains Syncline, Utah, U.S.A., Drew L. Seymour

Department of Earth and Atmospheric Sciences: Dissertations, Theses, and Student Research

This study presents high-resolution correlations of the Upper Cretaceous stratigraphy between the Book Cliffs and the western Henry Mountains Syncline in Utah. The objective of this study is to understand changes in patterns of regional sediment dispersal during the Late Cretaceous on the western margin of the Cretaceous Western Interior Seaway. The intensely studied Book Cliffs consist of formations deposited in terrestrial, marginal-marine, and open-marine environments. A composite section was logged at Coal Canyon near Green River, UT. The western Henry Mountains Syncline is located in south-central Utah ~135 km S-SW of Coal Canyon. A composite section was logged at …

Plankton Evolution Driven By Paleoceanographic Change: Prediscosphaera From The Mid-Cretaceous In The Western North Atlantic, Kristen L. Mitchell

Department of Earth and Atmospheric Sciences: Dissertations, Theses, and Student Research

Well-preserved nannofossil assemblages in late Albian and Cenomanian hemipelagic sections from Ocean Drilling Program (ODP) Leg 171B preserve a record of the early history and adaptive radiation of the calcareous nannofossil genus Prediscosphaera. There was a significant rise in the abundance of the genus (from an average of 2% in the early late Albian to about 6% in the latest Albian and Cenomanian. This rise, and other shorter term pulses of increased generic abundance, corresponds to black shale deposition episodes. Twelve distinct morphotypes that were derived from the long-ranging Prediscosphera columnata and Prediscosphaera spinosa, are recognized and differentiated …