Geology Commons^™

Microbial Diversity In Urban Environments: Concern For Antibiotic Resistance, Ality Aghedo, Mangala Tawde, Nazrul I. Khandaker

Publications and Research

We are almost oblivious to the presence of microorganisms in our daily lives, but they exist and come into contact with us all the time. While some bacteria are harmless, and even beneficial, other bacteria can cause infections. A common treatment to bacterial infections is antibiotics and the success of an antibiotic depends on the resistance of the bacteria to the antibiotic. We conducted experiments to identify the types of bacteria that can be found on surfaces or within soil environments that come into contact with a vast number of people on a daily basis and how this can affect …

Water Flow Net Characterization By Using A Tank Model: Preliminary Outcome, Jasmin Budhan, Nazrul I. Khandaker, Stanley Schleifer

Publications and Research

A model study was conducted to observe and characterize the flow of water through sandy soil. One of the most relevant tools used for characterizing groundwater flow is the flow net. Assuming that water is incompressible and there is zero volume change in the soil mass, it is known that the total rate of inflow is to equal the total rate of outflow. Thus, following the principle of flow continuity, we use the Laplace equation of continuity, to observe the concept of the flow net. Computing the flow through a miniature channel, we observed the total head difference from the …

The Challenges Of Geotechnical Exploration In Bangladesh For Sustainable Urban Development And Risk Reductions In Engineering Geology, Mir Fazul Karim, Nazrul I. Khandaker, Muhammad Qumrul Hasson, A.T.M. Shakhawat Hossain

Publications and Research

Bangladesh is a unique example of rapid urbanization where the urban population increased from 5 to 58 million in last four decades. Due to complex geology and active tectonic setting, the urban ground is impacted by fluvio-deltaic processes and regional seismicity. The densely populated cities of the country are facing risks from many natural hazards like floods, tidal surge, riverbank and coastal erosion, scour, landslides, soil collapse and foundation failures. Geologists anticipate severe seismic threats from yet-undefined tectonic structures and seek to determine their consequential geo-structural responses and conformance to the national building code. With rapid growth, demands on infrastructure …

Recruiting And Retaining K9–16 Students Through Field- And Laboratory - Based Geoscience Experiences, Nazrul I. Khandaker, Stanley Schleifer, Arif M. Sikder, Krishna Mahabir, Ality Aghedo, Charren Cabaroy, Mildred M. Selby, Gugu Ginindza, Leonardo Sanchez

Publications and Research

Since 2004, we have been directly involved with the GSA to provide access and opportunities for K9-16 students, particularly those interested in the broader aspects of geoscience-related topics, to present their field-and- laboratory based research outcomes at professional conferences and to learn from each other. So far, well-over 400 students from the U. S. and abroad have taken advantage of this opportunity and participated our topical sessions. It is quite gratifying to report that many of these students, as a result of their attendance at the GSA conference, felt a continuing need for exposure to high-level professional venues with effective …

Groundwater Contamination At Coal Ash Deposit Sites In Kentucky, Brandon Rose

Scholars Week

No abstract provided.

Kentucky Flood And Flash Flood Comparison Of 1996 And 2017 Using Gis, Harrison Kelly

Scholars Week

No abstract provided.

Morphodynamics Of Shell Key And Mullet Key Barrier Islands: Their Origin And Development, Zachary J. Westfall

USF Tampa Graduate Theses and Dissertations

Shell Key and Mullet Key are two sandy barrier islands on the West Central Florida coast near the mouth of Tampa Bay. These islands are part of an interconnected barrier-inlet system that includes Pass-a-Grille (PAG) and Bunces Pass. Shell Key is a relatively new island about 40-years of age that formed in between the two inlets of Bunces Pass and PAG. Mullet Key is an island to the south of Shell Key situated between Bunces Pass and the main Tampa Bay channel that has demonstrated large scale upward shoaling events. Using numerical modeling, the wave and tidal conditions at the …

Indirect Greenhouse Gas Dynamics In Karst Groundwater Systems Under Agricultural Land Use, Stacy Wayne Antle

Masters Theses & Specialist Projects

Greenhouse gases (GHGs) are a major global environmental concern, because their concentrations have continuously increased over the past few centuries, due to global population growth, fossil fuel dependency, and the Industrial Revolution. Since these gases are naturally occurring phenomena, they will never be completely eliminated. Efforts to reduce them span numerous scientific attempts, with minimal improvements in reducing their atmospheric concentrations. In agricultural land practices, greenhouse gases are common byproducts that affect the atmosphere and, potentially, the groundwater where livestock and fertilizers are key contributors. Little is known about the fate of such greenhouse gases in dissolved form, known as …

Land-Use Impacts On The Hydrology Of The Hidden River Groundwater Subbasin, Horse Cave, Hart County, Kentucky, Cesalea N. Osborne

Masters Theses & Specialist Projects

No abstract provided.

Further Evidence For The Invasion And Establishment Of Pterois Volitans (Teleostei: Scorpaenidae) Along The Atlantic Coast Of The United States, H. Scott Meister, David M. Wyanski, Joshua K. Loefer, Steve W. Ross, Andrea M. Quattrini, Kenneth J. Sulak

United States Geological Survey: Staff Publications

We document the continues population expansion of red lionfish, Pterois volitans, the first documented successful introduction of an invasive marine fish species from the western Pacific to Atlantic coastal water of the United States. Red lionfish are indigenous to the Indo-Pacific and have apparently established one or more breeding population on reefs off the southeastern United States. Fifty-nine specimens, most presumably adult red lionfish, were documented or collected on live-bottom reefs North Carolina, South Caroline, and Florida, and on a manmade structure off Georgia. Observation/collection depths and bottom water temperatures for these fish ranged from 4-99 m and 13.8-24.4 …

Marine Threats Overlap Key Foraging Habitat For Two Imperiled Sea Turtle Species In The Gulf Of Mexico, Kristen M. Hart, Autumn R. Iverson, Ikuko Fujisaki, Margaret M. Lamont, David Bucklin, Donna J. Shaver

United States Geological Survey: Staff Publications

Effective management of human activities affecting listed species requires understanding both threats and animal habitat-use patterns. However, the extent of spatial overlap between high-use foraging areas (where multiple marine species congregate) and anthropogenic threats is not well-known. Our modeling approach incorporates data on sea turtle spatial ecology and a suite of threats in the Gulf of Mexico to identify and map “hot spots” of threats to two imperiled turtle species. Of all 820 “high” threats grid cells, our tracked turtles foraged at least 1 day in 77% of them. Although threat data were not available outside the U.S. Exclusive Economic …

Estimating Dominant Runoff Modes Across The Conterminous United States, Brian Buchanan, Daniel A. Auerbach, James Knighton, Darrick Evensen, Daniel R. Fuka, Zachary Easton, Michael Wieczorek, Josephine A. Archibald, Brandon Mcwilliams, Todd Walter

United States Geological Survey: Staff Publications

Effective natural resource planning depends on understanding the prevalence of runoff generating processes. Within a specific area of interest, this demands reproducible, straightforward information that can complement available local data and can orient and guide stakeholders with diverse training and backgrounds. To address this demand within the contiguous United States (CONUS), we characterized and mapped the predominance of two primary runoff generating processes: infiltration‐excess and saturation‐excess runoff (IE vs. SE, respectively). Specifically, we constructed a gap‐filled grid of surficial saturated hydraulic conductivity using the Soil Survey Geographic and State Soil Geographic soils databases. We then compared surficial saturated hydraulic conductivity …

Global Dynamics Of A Mutualism–Competition Model With One Resource And Multiple Consumers, Yuanshi Wang, Hong Wu, Donald L. Deangelis

United States Geological Survey: Staff Publications

Recent simulation modeling has shown that species can coevolve toward clusters of coexisting consumers exploiting the same limiting resource or resources, with nearly identical ratios of coefficients related to growth and mortality. This paper provides a mathematical basis for such as situation; a full analysis of the global dynamics of a new model for such a class of n-dimensional consumer–resource system, in which a set of consumers with identical growth to mortality ratios compete for the same resource and in which each consumer is mutualistic with the resource. First, we study the system of one resource and two consumers. …

Ancient Convergent Losses Of Paraoxonase 1 Yield Potential Risks For Modern Marine Mammals, Wynn K. Meyer, Jerrica Jamison, Rebecca Richter, Stacy E. Woods, Raghavendran Partha, Amanda Kowalczyk, Charles Kronk, Maria Chikina, Robert K. Bonde, Daniel E. Crocker, Joseph Gaspard, Janet M. Lanyon, Judit Marsillach, Clement E. Furlong, Nathan L. Clark

United States Geological Survey: Staff Publications

Mammals diversified by colonizing drastically different environments, with each transition yielding numerous molecular changes, including losses of protein function. Though not initially deleterious, these losses could subsequently carry deleterious pleiotropic consequences. We have used phylogenetic methods to identify convergent functional losses across independent marine mammal lineages. In one extreme case, Paraoxonase 1 (PON1) accrued lesions in all marine lineages, while remaining intact in all terrestrial mammals. These lesions coincide with PON1 enzymatic activity loss in marine species’ blood plasma. This convergent loss is likely explained by parallel shifts in marine ancestors’ lipid metabolism and/or bloodstream oxidative environment affecting PON1’s role …

Internal Parasites Of The Two Subspecies Of The West Indian Manatee Trichechus Manatus, Heidi Wyrosdick, Alycia Chapman, Antonio A. Mignucci-Giannoni, Carla I. Rivera-Pérez, Robert K. Bonde

United States Geological Survey: Staff Publications

The West Indian manatee Trichechus manatus is divided into 2 subspecies: the Antillean (T. m. manatus) and Florida (T. m. latirostris) manatees. This study reports sample prevalence of manatee parasites from populations of these 2 subspecies in different geographical locations. Although necropsy is a valuable diagnostic tool for parasite infections, the need for antemortem diagnostic techniques is important. Fecal samples collected during necropsies of Antillean manatees (n = 3) in Puerto Rico and Florida manatees (n = 10) in Crystal River, Florida, as well as from live-captured Florida manatees (n = 11) were evaluated using centrifugal …

Serum Proteins In Healthy And Diseased Florida Manatees (Trichechus Manatus Latirostris), J.W. Harvey, K.E. Harr, D. Murphy, M.T. Walsh, M. De Wit, R.K. Bonde

United States Geological Survey: Staff Publications

A major goal of this study was to determine whether serum protein fractions of healthy Florida manatees differ with age, sex, or living environments (wild versus housed). A second goal was to determine which serum protein fractions vary in diseased versus healthy manatees. Serum protein fractions were determined using agarose gel electrophoresis. Healthy adults had slightly higher total serum protein and total globulin concentrations than younger animals. This largely resulted from an increase in gamma globulins with age. Total serum protein, albumin, alpha-1 globulin, beta globulin, and total globulin concentrations were slightly higher in housed manatees compared to wild manatees, …

Visualization Of Geospatial Data As An Analytical And Educational Tool, Richard A. Vu

STAR Program Research Presentations

World Wind is an open-source API developed for Java, Android, and browsers that is designed to visualize and interact with geospatial data. The Web World Wind client is composed of four major components: the HTML template, the globe, geospatial features, and application features. The template was implemented using Bootstrap and hosts the globe provided by World Wind. This globe draws its data from multiple imagery sources, including the Open Geospatial Consortium (OGC) Web Map Service and Web Map Tile Service. This enables the application to perform and visualize complex calculations with multiple types of data such as weather and terrain. …

Quantifying The Environmental Performance Of A Stream Habitat Improvement Project, Cody Morse

Master's Theses

River restoration projects are being installed worldwide to rehabilitate degraded river habitat. Many of these projects focus on stream habitat improvement (SHI), and an estimated 60%of the 37,000 projects listed in the National River Restoration Science Synthesis Program focus on SHI for salmon and trout species. These projects frequently lack a sufficient monitoring program or account for the environmental costs associated with SHI. The present study used life cycle assessment (LCA) techniques and topographic effectiveness monitoring to quantify environmental costs on the basis of geomorphic change. This methodology was a novel approach to assessing the cost-benefit relationship of SHI. To …

Geomorphology Of Icy Debris Fans: Delivery Of Ice And Sediment To Valley Glaciers Decoupled From Icecaps, R. Craig Kochel, Jeffrey M. Trop, Robert W. Jacob

Faculty Journal Articles

The pace and volume of mass flow processes contributing ice and sediment to icy debris fans (IDFs) were documented at sites in Alaska and New Zealand by integrating field observations, drone and time-lapse imagery, ground penetrating radar, and terrestrial laser scanning. Largely unstudied, IDFs are supraglacial landforms at the mouths of bedrock catchments between valley glaciers and icecaps. Time-lapse imagery recorded 300–2300 events reaching 15 fans during intervals from nine months to two years. Field observations noted hundreds of deposits trapped within catchments weekly that were later remobilized onto fans. Deposits were mapped on images taken three to four times …

Estimating Watershed Mercury Contribution To Lake Fort Smith State Park, Arkansas, Usa, William Miles Harmon

Graduate Theses and Dissertations

Mercury contamination associated with human activities poses global human health and environmental risks. A fish-consumption advisory has been in effect at Lake Fort Smith in central west Arkansas for more than a decade due to observed methylmercury concentrations in fish tissue. Lake Fort Smith is an important municipal drinking water supply and recreational resource. Water samples from the majority contributing tributary stream, Frog Bayou creek, were collected periodically, under differing hydrologic conditions in order to quantify the allochthonous mercury load delivered to the lake. Temperature, specific conductance, and turbidity data were collected and used to estimate dissolved organic carbon, methylmercury …

Relationships Between Landscape Constraints And A Crayfish Assemblage With Consideration Of Competitor Presence, Joshua B. Mouser, Robert Mollenhauer, Shannon K. Brewer

United States Geological Survey: Staff Publications

Aim: Crayfish are globally diverse and one of the most important taxa in North American streams. Despite their importance, many species are of conservation concern and efforts to improve conditions are limited. Here, we address two major impediments to improving conditions: (a) our lack of knowledge of the interplay among natural landscape and human-induced changes; and (b) a very limited understanding of how species interactions affect overall crayfish distributions.

Location: Ozark Highlands ecoregion, USA.

Methods: We used both existing data and field-collected data to examine the relationships between 12 Faxonius species and physicochemical variables at multiple spatial scales. Data were …

The Global Food-Energy-Water Nexus, Paolo D’Odorico, Kyle Frankel Davis, Lorenzo Rosa, Joel A. Carr, Davide Chiarelli, Jampel Dell’Angelo, Jessica Gephart, Graham K. Macdonald, David A. Seekell, Samir Suweis, Maria Cristina Rulli

United States Geological Survey: Staff Publications

Abstract Water availability is a major factor constraining humanity’s ability to meet the future food and energy needs of a growing and increasingly affluent human population. Water plays an important role in the production of energy, including renewable energy sources and the extraction of unconventional fossil fuels that are expected to become important players in future energy security. The emergent competition for water between the food and energy systems is increasingly recognized in the concept of the “food-energy-water nexus.” The nexus between food and water is made even more complex by the globalization of agriculture and rapid growth in food …

Variation In Home Range Size And Patterns In Adult Female American Crocodiles Crocodylus Acutus, Jeffrey S. Beauchamp, Kristen M. Hart, Michael S. Cherkiss, Frank J. Mazzotti

United States Geological Survey: Staff Publications

The American crocodile Crocodylus acutus is a threatened species that uses relatively deep, open-water habitats with low salinity. Adult female American crocodiles nest on sandy coastal beaches, islands or human-made berms, assist in the hatching process, and can travel long distances to nesting habitat. We satellite-tracked 15 adult female American crocodiles in 2 hydrologically distinct areas in Everglades National Park, Florida, USA, to quantify the home range sizes, test for intraspecific differences in home range and core area size and structure, and identify important crocodile high-use areas. Overall home ranges (95% kernel density estimate; KDE) for adult female crocodiles in …

Review Of Curbing Catastrophe: Natural Hazards And Risk Reduction In The Modern World, Kira H. Hamman

Numeracy

Timothy H. Dixon. 2017. Curbing Catastrophe: Natural Hazards and Risk Reduction in the Modern World. (New York, NY: Cambridge University Press) 300 pp. ISBN 978-1108113663.

In Curbing Catastrophe, Timothy H. Dixon explores commonalities among natural disasters like Hurricane Katrina, the 2010 earthquake in Haiti, and the meltdown at Fukushima. He identifies communication failure between scientists and policy makers as a major culprit in the devastation that results from such events and offers strategies for improving that communication. He includes optional in-depth scientific and quantitative examinations of the events and the resulting devastation, making the book appropriate for use …

Correction To: Organochlorine Chemical Residues In Northern Cardinal (Cardinalis Cardinalis) Eggs From Greater Washington, Dc Usa, Christopher J. Schmitt, Kathy R. Echols, Paul H. Peterman, Carl E. Orazio, K. Christiana Grim, Shirlee Tan, Nora E. Diggs, Peter P. Marra

United States Geological Survey: Staff Publications

The original version of this article contained a mistake. Author name in the text citation and reference in section should be Maldonado et al (2016), it was incorrectly spelled as Maldinado et al (2015).

Estimating Live Fuel Moisture In Southern California Using Remote Sensing Vegetation Water Content Proxies, Shenyue Jia, Seung Hee Kim, Son V. Nghiem, Wonhee Cho, Menas Kafatos

Mathematics, Physics, and Computer Science Faculty Articles and Research

Wildfires are a major ecological disturbance in Southern California and often lead to great destruction along the Wildland-Urban Interface. Live fuel moisture has been used as an important indicator of wildfire risk in measurements of vegetation water content. However, the limited field measurements of live fuel moisture in both time and space have affected the accuracy of wildfire risk estimations. Traditional estimation of live fuel moisture using remote sensing data was based on vegetation indices, indirect proxies of vegetation water content and subject to influence from weather conditions. In this study, we investigated the feasibility of estimating live fuel moisture …

Shear Wave Tomography Beneath The United States Using A Joint Inversion Of Surface And Body Waves, E. M. Golos, H. Fang, H. Yao, H. Zhang, Scott Burdick, F. Vernon, A. Schaeffer, S. Lebedev, R. D. Van Der Hilst

Environmental Science and Geology Faculty Research Publications

Resolving both crustal and shallow-mantle heterogeneity, which is needed to study processes in and fluxes between crust and mantle, is still a challenge for seismic tomography. Body wave data can constrain deep features but often produce vertical smearing in the crust and upper mantle; in contrast, surface wave data can provide good vertical resolution of lithospheric structure but may lack lateral resolution and are less sensitive to the deeper Earth. These two data types are usually treated and inverted separately, and tomographic models therefore do not, in general, benefit from the complementary nature of sampling by body and surface waves. …

Nonbreeding Duck Use At Central Flyway National Wildlife Refuges, Kent Andersson, Craig A. Davis, Grant Harris, David A. Haukos

United States Geological Survey: Staff Publications

Within the U.S. portion of the Central Flyway, the U.S. Fish and Wildlife Service manages waterfowl on numerous individual units (i.e., Refuges) within the National Wildlife Refuge System. Presently, the extent of waterfowl use that Refuges receive and the contribution of Refuges to waterfowl populations (i.e., the proportion of the Central Flyway population registered at each Refuge) remain unassessed. Such an evaluation would help determine to what extent Refuges support waterfowl relative to stated targets, aid in identifying species requiring management attention, inform management targets, and improve fiscal efficiencies. Using historic monitoring data (1954–2008), we performed this assessment for 23 …

Evaluation Of Potential Translocation Sites For An Imperiled Cyprinid, The Hornyhead Chub, Brian T. Hickerson, Annika W. Walters

United States Geological Survey: Staff Publications

Translocation of isolated species into suitable habitats may help to secure vulnerable, geographically limited species. Due to the decline of Wyoming Hornyhead Chub Nocomis biguttatus, conservation actions, such as the translocation of populations within the plausible historical range, are being considered to improve population redundancy and resiliency to disturbance events. Translocation of Wyoming Hornyhead Chub must be rigorously evaluated because a hatchery stock does not exist, so all fish used in translocations will come from the wild population. We present an approach to identify the best available translocation sites prior to translocation efforts taking place. We evaluated fish community composition …

Macrobenthic Infaunal Communities Associated With Deep‐Sea Hydrocarbon Seeps In The Northern Gulf Of Mexico, Travis W. Washburn, Amanda W. J. Demopoulos, Paul A. Montagna

United States Geological Survey: Staff Publications

There are thousands of seeps in the deep ocean worldwide; however, many questions remain about their contributions to global biodiversity and the surrounding deep‐sea environment. In addition to being globally distributed, seeps provide several benefits to humans such as unique habitats, organisms with novel genes, and carbon regulation. The purpose of this study is to determine whether there are unique seep macrobenthic assemblages, by comparing seep and nonseep environments, different seep habitats, and seeps at different depths and locations. Infaunal community composition, diversity, and abundance were examined between seep and nonseep background environments and among three seep habitats (i.e., microbial …