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United States Geological Survey: Staff Publications

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Articles 271 - 300 of 1026

Full-Text Articles in Earth Sciences

Biogeochemical Aspects Of Uranium Mineralization, Mining, Milling, And Remediation, Kate M. Campbell, Tanya J. Gallegos, Edward R. Landa Jan 2014

Biogeochemical Aspects Of Uranium Mineralization, Mining, Milling, And Remediation, Kate M. Campbell, Tanya J. Gallegos, Edward R. Landa

United States Geological Survey: Staff Publications

Natural uranium (U) occurs as a mixture of three radioactive isotopes: 238U, 235U, and 234U. Only 235U is fissionable and makes up about 0.7% of natural U, while 238U is overwhelmingly the most abundant at greater than 99% of the total mass of U. Prior to the 1940s, U was predominantly used as a coloring agent, and U-bearing ores were mined mainly for their radium (Ra) and/or vanadium (V) content; the bulk of the U was discarded with the tailings (Finch et al., 1972). Once nuclear fission was discovered, the economic importance of U increased greatly. The mining and milling …

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Comparing Cropland Net Primary Production Estimates Frominventory, A Satellite-Based Model, And A Process-Based Model In Themidwest Of The United States, Zengpeng Li, Shuguang Liu, Zhengxi Tan, Normann B. Bliss, Claudia J. Young, Tristram O. West, Stephen M. Ogle Jan 2014

Comparing Cropland Net Primary Production Estimates Frominventory, A Satellite-Based Model, And A Process-Based Model In Themidwest Of The United States, Zengpeng Li, Shuguang Liu, Zhengxi Tan, Normann B. Bliss, Claudia J. Young, Tristram O. West, Stephen M. Ogle

United States Geological Survey: Staff Publications

Accurately quantifying the spatial and temporal variability of net primary production (NPP) for crop-lands is essential to understand regional cropland carbon dynamics. We compared three NPP estimates for croplands in the Midwestern United States: inventory-based estimates using crop yield data from the U.S. Department of Agriculture (USDA) National Agricultural Statistics Service (NASS); estimates from the satellite-based Moderate Resolution Imaging Spectroradiometer (MODIS) NPP product; and estimates from the General Ensemble biogeochemical Modeling System (GEMS) process-based model. The three methods estimated mean NPP in the range of 469–687 g C m−2yr−1and total NPP in the range of318–490 Tg C yr−1for croplands in …

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Radiocarbon Dating Loess Deposits In The Mississippi Valley Using Terrestrial Gastropod Shells (Polygyridae, Helicinidae, And Discidae), Jeffrey S. Pigati, John Mcgeehin, Daniel R. Muhs, David A. Grimley, Jeffrey C. Nekola Jan 2014

Radiocarbon Dating Loess Deposits In The Mississippi Valley Using Terrestrial Gastropod Shells (Polygyridae, Helicinidae, And Discidae), Jeffrey S. Pigati, John Mcgeehin, Daniel R. Muhs, David A. Grimley, Jeffrey C. Nekola

United States Geological Survey: Staff Publications

Small terrestrial gastropod shells (mainly Succineidae) have been used successfully to date late Quaternary loess deposits in Alaska and the Great Plains. However, Succineidae shells are less common in loess deposits in the Mississippi Valley compared to those of the Polygyridae, Helicinidae, and Discidae families. In this study, we conducted several tests to determine whether shells of these gastropods could provide reliable ages for loess deposits in the Mississippi Valley. Our results show that most of the taxa that we investigated incorporate small amounts (1–5%) of old carbon from limestone in their shells, meaning that they should yield ages that …

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Loess Records, Daniel R. Muhs, Stephen R. Cattle, Onn Crouvi, Denis-Didier Rousseau, Jimin Sun, Marcelo A. Zárate Jan 2014

Loess Records, Daniel R. Muhs, Stephen R. Cattle, Onn Crouvi, Denis-Didier Rousseau, Jimin Sun, Marcelo A. Zárate

United States Geological Survey: Staff Publications

Loess is aeolian sediment, dominated by silt-sized particles, that is identifiable in the field as a distinct sedimentary body. It covers a significant portion of the land surface of the Earth and as such constitutes one of the most important archives of long-term dust deposition. Large tracts of loess cover Europe, Asia, South America, and North America, and smaller loess bodies are found covering parts of Africa, the Middle East, New Zealand, and Australia. Loess thickness, particle size, and carbonate content decrease downwind from sources, trends that are powerful tools for reconstructing paleowinds. Many loess sections consist of relatively thick …

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Evidence Of Repeated Wildfires Prior To Human Occupation On San Nicolas Island, California, Jeffrey S. Pigati, John P. Mcgeehin, Gary L. Skipp, Daniel R. Muhs Jan 2014

Evidence Of Repeated Wildfires Prior To Human Occupation On San Nicolas Island, California, Jeffrey S. Pigati, John P. Mcgeehin, Gary L. Skipp, Daniel R. Muhs

United States Geological Survey: Staff Publications

Understanding how early humans on the California Channel Islands might have changed local fire regimes requires a baseline knowledge of the frequency of natural wildfires on the islands prior to human occupation. A sedimentary sequence that was recently discovered in a small canyon on San Nicolas Island contains evidence of at least 24 burn events that date to between ~37 and 25 ka (thousands of calibrated 14C years before present), well before humans entered North America. The evidence includes abundant macroscopic charcoal, blackened sediments, and discrete packages of oxidized, reddish-brown sediments that are similar in appearance to sedimentary features …

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Nongeocentric Axial Dipole Field Behavior During The Mono Lake Excursion, Robert M. Negrini, Daniel T. Mccuan, Robert A. Horton, James D. Lopez, William S. Cassata, James E. T. Channell, Kenneth L. Verosub, Jeffrey R. Knott, Robert S. Coe, Joseph C. Liddicoat, Steven P. Lund, Larry Benson, Andrei M. Sarna-Wojcicki Jan 2014

Nongeocentric Axial Dipole Field Behavior During The Mono Lake Excursion, Robert M. Negrini, Daniel T. Mccuan, Robert A. Horton, James D. Lopez, William S. Cassata, James E. T. Channell, Kenneth L. Verosub, Jeffrey R. Knott, Robert S. Coe, Joseph C. Liddicoat, Steven P. Lund, Larry Benson, Andrei M. Sarna-Wojcicki

United States Geological Survey: Staff Publications

A new record of the Mono Lake excursion (MLE) is reported from the Summer Lake Basin of Oregon, USA. Sediment magnetic properties indicate magnetite as the magnetization carrier and imply suitability of the sediments as accurate recorders of the magnetic field including relative paleointensity (RPI) variations. The magnitudes and phases of the declination, inclination, and RPI components of the new record correlate well with other coeval but lower resolution records from western North America including records from the Wilson Creek Formation exposed around Mono Lake. The virtual geomagnetic pole (VGP) path of the new record is similar to that from …

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Wetland Reserve Program Enhances Site Occupancy And Species Richness In Assemblages Of Anuran Amphibians In The Mississippi Alluvial Valley, Usa, Susan C. Walls, J. Hardin Waddle, Stephen P. Faulkner Jan 2014

Wetland Reserve Program Enhances Site Occupancy And Species Richness In Assemblages Of Anuran Amphibians In The Mississippi Alluvial Valley, Usa, Susan C. Walls, J. Hardin Waddle, Stephen P. Faulkner

United States Geological Survey: Staff Publications

We measured amphibian habitat use to quantify the effectiveness of conservation practices implemented under the Wetland Reserve Program (WRP), an initiative of the U.S. Department of Agriculture’s Natural Resources Conservation Service. From February to June 2007, we quantified calling male anurans in cultivated cropland, former cultivated cropland restored through the WRP, and mature bottomland hardwood forest. Sites were located in two watersheds within the Mississippi Alluvial Valley of Arkansas and Louisiana, USA. We estimated detection probability and site occupancy within each land use category using a Bayesian hierarchical model of community species occurrence, and derived an estimate of species richness …

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Mapping Irrigated Areas In Afghanistan Over The Past Decade Using Modis Ndvi, Md. Shahriar Pervez, Michael Budde, James Rowland Jan 2014

Mapping Irrigated Areas In Afghanistan Over The Past Decade Using Modis Ndvi, Md. Shahriar Pervez, Michael Budde, James Rowland

United States Geological Survey: Staff Publications

Agricultural production capacity contributes to food security in Afghanistan and is largely dependent on irrigated farming, mostly utilizing surface water fed by snowmelt. Because of the high contribution of irrigated crops (> 80%) to total agricultural production, knowing the spatial distribution and year-to-year variability in irrigated areas is imperative to monitoring food security for the country. We used 16-day composites of the Normalized Difference Vegetation Index (NDVI) from the Moderate Resolution Imaging Spectroradiometer (MODIS) sensor to create 23-point time series for each year from 2000 through 2013. Seasonal peak values and time series were used in a threshold-dependent decision tree …

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Maintaining Resilience In The Face Of Climate Change, Alejandro E. Camacho, T. Douglas Beard Jan 2014

Maintaining Resilience In The Face Of Climate Change, Alejandro E. Camacho, T. Douglas Beard

United States Geological Survey: Staff Publications

Climate change, when combined with more conventional stress from human exploitation, calls into question the capacity of both existing ecological communities and resource management institutions to experience disturbances while substantially retaining their same functions and identities (Zellmer and Gunderson 2009; Ruhl 2011). In other words, the physical and biological effects of climate change raise fundamental challenges to the resilience of natural ecosystems (Gunderson and Holling 2002). Perhaps more importantly, the projected scope of ecological shifts from global climate change-and uncertainty about such changes-significantly stresses the capacity of legal institutions to manage ecosystem change (Camacho 2009). Existing governmental institutions lack the …

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Riverbank Filtration Potential Of Pharmaceuticals In A Wastewater-Impacted Stream, Paul M. Bradley, Larry B. Barber, Joesph W. Duris, William T. Foreman, Edward T. Furlong, Laura E. Hubbard, Kasey J. Hutchinson, Steffanie H. Keefe, Dana W. Kolpin Jan 2014

Riverbank Filtration Potential Of Pharmaceuticals In A Wastewater-Impacted Stream, Paul M. Bradley, Larry B. Barber, Joesph W. Duris, William T. Foreman, Edward T. Furlong, Laura E. Hubbard, Kasey J. Hutchinson, Steffanie H. Keefe, Dana W. Kolpin

United States Geological Survey: Staff Publications

Pharmaceutical contamination of shallow groundwater is a substantial concern in effluent-dominated streams, due to high aqueous mobility, designed bioactivity, and effluent-driven hydraulic gradients. In October and December 2012, effluent contributed approximately 99% and 71%, respectively, to downstream flow in Fourmile Creek, Iowa, USA. Strong hydrologic connectivity was observed between surface-water and shallow-groundwater. Carbamazepine, sulfamethoxazole, and immunologically related compounds were detected in groundwater at greater than 0.02 mg L^-1 at distances up to 6 m from the stream bank. Direct aqueous-injection HPLC-MS/MS revealed 43% and 55% of 110 total pharmaceutical analytes in surface-water samples in October and December, respectively, with 16% …

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Parameter Estimation For Groundwater Models Under Uncertain Irrigation Data, Yonas Demissie, Albert Valocchi, Ximing Cai, Nicholas Brozovic, Gabriel Senay, Mekonnen Gebremichael Jan 2014

Parameter Estimation For Groundwater Models Under Uncertain Irrigation Data, Yonas Demissie, Albert Valocchi, Ximing Cai, Nicholas Brozovic, Gabriel Senay, Mekonnen Gebremichael

United States Geological Survey: Staff Publications

The success of modeling groundwater is strongly influenced by the accuracy of the model parameters that are used to characterize the subsurface system. However, the presence of uncertainty and possibly bias in groundwater model source/sink terms may lead to biased estimates of model parameters and model predictions when the standard regression-based inverse modeling techniques are used. This study first quantifies the levels of bias in groundwater model parameters and predictions due to the presence of errors in irrigation data. Then, a new inverse modeling technique called input uncertainty weighted least-squares (IUWLS) is presented for unbiased estimation of the parameters when …

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Humic Substances Interfere With Detection Of Pathogenic Prion Protein, Christen B. Smith, Clarissa J. Booth, Tyler J. Wadzinski, Giuseppe Legname, Rick Chappell, Christopher J. Johnson, Joel A. Pedersen Jan 2014

Humic Substances Interfere With Detection Of Pathogenic Prion Protein, Christen B. Smith, Clarissa J. Booth, Tyler J. Wadzinski, Giuseppe Legname, Rick Chappell, Christopher J. Johnson, Joel A. Pedersen

United States Geological Survey: Staff Publications

Studies examining the persistence of prions (the etiological agent of transmissible spongiform encephalopathies) in soil require accurate quantification of pathogenic prion protein (PrPTSE) extracted from or in the presence of soil particles. Here, we demonstrate that natural organic matter (NOM) in soil impacts PrPTSE detection by immunoblotting. Methods commonly used to extract PrPTSE from soils release substantial amounts of NOM, and NOM inhibited PrPTSE immunoblot signal. The degree of immunoblot interference increased with increasing NOM concentration and decreasing NOM polarity. Humic substances affected immunoblot detection of prion protein from both deer and hamsters. We also establish that after interaction with …

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Structural Equation Models Of Vmt Growth In Us Urbanised Areas, Reid Ewing, Shima Hamidi, Frank Gallivan, Arthur C. Nelson, James B. Grace Jan 2014

Structural Equation Models Of Vmt Growth In Us Urbanised Areas, Reid Ewing, Shima Hamidi, Frank Gallivan, Arthur C. Nelson, James B. Grace

United States Geological Survey: Staff Publications

Vehicle miles travelled (VMT) is a primary performance indicator for land use and transportation, bringing with it both positive and negative externalities. This study updates and refines previous work on VMT in urbanised areas, using recent data, additional metrics and structural equation modelling (SEM). In a cross-sectional model for 2010, population, income and freeway capacity are positively related to VMT, while gasoline prices, development density and transit service levels are negatively related. Findings of the cross-sectional model are generally confirmed in a more tightly controlled longitudinal study of changes in VMT between 2000 and 2010, the first model of its …

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Merging Remote Sensing Data And National Agricultural Statistics To Model Change In Irrigated Agriculture, Jesslyn F. Brown, Md Shahriar Pervez Jan 2014

Merging Remote Sensing Data And National Agricultural Statistics To Model Change In Irrigated Agriculture, Jesslyn F. Brown, Md Shahriar Pervez

United States Geological Survey: Staff Publications

Over 22 million hectares (ha) of U.S. croplands are irrigated. Irrigation is an intensified agricultural land use that increases crop yields and the practice affects water and energy cycles at, above, and below the land surface. Until recently, there has been a scarcity of geospatially detailed information about irrigation that is comprehensive, consistent, and timely to support studies tying agricultural land use change to aquifer water use and other factors. This study shows evidence for a recent overall net expansion of 522 thousand ha across the U.S. (2.33%) and 519 thousand ha (8.7%) in irrigated cropped area across the High …

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Comparing Crop Land Net Primary Production Estimates From Inventory, A Satellite-Based Model, And A Process-Based Model In The Midwest Of The United States Zhengpeng, Zhengpeng Li, Shuguang Liu, Zhengxi Tan, Normann B. Bliss, Claudia J. Young, Tristram O. West, Stephen M. Ogle Jan 2014

Comparing Crop Land Net Primary Production Estimates From Inventory, A Satellite-Based Model, And A Process-Based Model In The Midwest Of The United States Zhengpeng, Zhengpeng Li, Shuguang Liu, Zhengxi Tan, Normann B. Bliss, Claudia J. Young, Tristram O. West, Stephen M. Ogle

United States Geological Survey: Staff Publications

Accurately quantifying the spatial and temporal variability of net primary production (NPP) for crop-lands is essential to understand regional cropland carbon dynamics. We compared three NPP estimates for croplands in the Midwestern United States: inventory-based estimates using crop yield data from the U.S. Department of Agriculture (USDA) National Agricultural Statistics Service (NASS); estimates from the satellite-based Moderate Resolution Imaging Spectro radiometer (MODIS) NPP product; and esti-mates from the General Ensemble bio geochemical Modeling System (GEMS) process-based model. The three methods estimated mean NPP in the range of 469–687 g C m−2yr−1and total NPP in the range …

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Summary Of The Snowmastodon Project Special Volume: A High-Elevation, Multi-Proxy Biotic And Environmental Record Of Mis 6–4 From The Ziegler Reservoir Fossil Site, Snowmass Village, Colorado, Usa, Ian M. Miller, Jeffrey S. Pigati, R. Scott Anderson, Kirk R. Johnson, Shannon A. Mahan, Thomas A. Ager, Richard G. Baker, Maarten Blaauw, Jordon Bright, Peter M. Brown, Bruce Bryant, Zachary T. Calamari, Paul E. Carrara, Michael D. Cherney, John R. Demboski, Scott A. Elias, Daniel C. Fisher, Harrison J. Gray, Danielle R. Haskett, Jeffrey S. Honke, Stephen T. Jackson, Gonzalo Jiménez- Moreno, Douglas Kline, Eric M. Leonard, Nathaniel A. Lifton, Carol Lucking, H. Gregory Mcdonald, Dane M. Miller, Daniel R. Muhs, Stephen E. Nash, Cody Newton, James B. Paces, Lesley Petrie, Mitchell A. Plummer, David F. Porinchu, Adam N. Rountrey, Eric Scott, Joseph J.W. Sertich, Saxon E. Sharpe, Gary L. Skipp, Laura E. Strickland, Richard K. Stucky, Robert S. Thompson, Jim Wilson Jan 2014

Summary Of The Snowmastodon Project Special Volume: A High-Elevation, Multi-Proxy Biotic And Environmental Record Of Mis 6–4 From The Ziegler Reservoir Fossil Site, Snowmass Village, Colorado, Usa, Ian M. Miller, Jeffrey S. Pigati, R. Scott Anderson, Kirk R. Johnson, Shannon A. Mahan, Thomas A. Ager, Richard G. Baker, Maarten Blaauw, Jordon Bright, Peter M. Brown, Bruce Bryant, Zachary T. Calamari, Paul E. Carrara, Michael D. Cherney, John R. Demboski, Scott A. Elias, Daniel C. Fisher, Harrison J. Gray, Danielle R. Haskett, Jeffrey S. Honke, Stephen T. Jackson, Gonzalo Jiménez- Moreno, Douglas Kline, Eric M. Leonard, Nathaniel A. Lifton, Carol Lucking, H. Gregory Mcdonald, Dane M. Miller, Daniel R. Muhs, Stephen E. Nash, Cody Newton, James B. Paces, Lesley Petrie, Mitchell A. Plummer, David F. Porinchu, Adam N. Rountrey, Eric Scott, Joseph J.W. Sertich, Saxon E. Sharpe, Gary L. Skipp, Laura E. Strickland, Richard K. Stucky, Robert S. Thompson, Jim Wilson

United States Geological Survey: Staff Publications

In North America, terrestrial records of biodiversity and climate change that span Marine Oxygen Isotope Stage (MIS) 5 are rare. Where found, they provide insight into how the coupling of the ocean–atmosphere system is manifested in biotic and environmental records and how the biosphere responds to climate change. In 2010–2011, construction at Ziegler Reservoir near Snowmass Village, Colorado (USA) revealed a nearly continuous, lacustrine/wetland sedimentary sequence that preserved evidence of past plant communities between ~140 and 55 ka, including all of MIS 5. At an elevation of 2705 m, the Ziegler Reservoir fossil site also contained thousands of well-preserved bones …

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Coastal Tectonics On The Eastern Margin Of The Pacific Rim: Late Quaternary Sea-Level History And Uplift Rates, Channel Islands National Park, California, Usa, Daniel R. Muhs, Kathleen R. Simmons, R. Randall Schumann, Lindsey T. Groves, Stephen B. Devogel, Scott A. Minor, Deanna Laurel Jan 2014

Coastal Tectonics On The Eastern Margin Of The Pacific Rim: Late Quaternary Sea-Level History And Uplift Rates, Channel Islands National Park, California, Usa, Daniel R. Muhs, Kathleen R. Simmons, R. Randall Schumann, Lindsey T. Groves, Stephen B. Devogel, Scott A. Minor, Deanna Laurel

United States Geological Survey: Staff Publications

The Pacific Rim is a region where tectonic processes play a significant role in coastal landscape evolution. Coastal California, on the eastern margin of the Pacific Rim, is very active tectonically and geomorphic expressions of this include uplifted marine terraces. There have been, however, conflicting estimates of the rate of late Quaternary uplift of marine terraces in coastal California, particularly for the northern Channel Islands. In the present study, the terraces on San Miguel Island and Santa Rosa Island were mapped and new age estimates were generated using uranium-series dating of fossil corals and amino acid geochronology of fossil mollusks. …

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Geologic Setting And Stratigraphy Of The Ziegler Reservoir Fossil Site, Snowmass Village, Colorado, Jeffrey S. Pigati, Ian M. Miller, Kirk R. Johnson, Jeffrey S. Honke, Paul E. Carrara, Daniel R. Muhs, Gary Skipp, Bruce Bryant Jan 2014

Geologic Setting And Stratigraphy Of The Ziegler Reservoir Fossil Site, Snowmass Village, Colorado, Jeffrey S. Pigati, Ian M. Miller, Kirk R. Johnson, Jeffrey S. Honke, Paul E. Carrara, Daniel R. Muhs, Gary Skipp, Bruce Bryant

United States Geological Survey: Staff Publications

The geologic setting of the Ziegler Reservoir fossil site is somewhat unusual—the sediments containing the Pleistocene fossils were deposited in a lake on top of a ridge. The lake basin was formed near Snowmass Village, Colorado (USA) when a glacier flowing down Snowmass Creek Valley became thick enough to overtop a low point in the eastern valley wall and entered the head of Brush Creek Valley. When the glacier retreated at about 155–130 ka, near the end of Marine Oxygen Isotope Stage 6, the Brush Creek Valley lobe left behind a moraine that impounded a small alpine lake. The lake …

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Exposure And Food Web Transfer Of Pharmaceuticals In Ospreys (Pandion Haliaetus): Predictive Model And Empirical Data, Rebecca S. Lazarus, Barnett A. Rattner, Bryan W. Brooks, Bowen Du, Peter C. Mcgowan, Vicki S. Blazer, Mary Ann Ottinger Jan 2014

Exposure And Food Web Transfer Of Pharmaceuticals In Ospreys (Pandion Haliaetus): Predictive Model And Empirical Data, Rebecca S. Lazarus, Barnett A. Rattner, Bryan W. Brooks, Bowen Du, Peter C. Mcgowan, Vicki S. Blazer, Mary Ann Ottinger

United States Geological Survey: Staff Publications

The osprey (Pandion haliaetus) is a well‐known sentinel of environmental contamination, yet no studies have traced pharmaceuticals through the water–fish–osprey food web. A screening‐level exposure assessment was used to evaluate the bioaccumulation potential of 113 pharmaceuticals and metabolites, and an artificial sweetener in this food web. Hypothetical concentrations in water reflecting “wastewater effluent dominated” or “dilution dominated” scenarios were combined with pH‐specific bioconcentration factors (BCFs) to predict uptake in fish. Residues in fish and osprey food intake rate were used to calculate the daily intake (DI) of compounds by an adult female osprey. Fourteen pharmaceuticals and a drug …

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Adverse Outcome Pathway And Risks Of Anticoagulant Rodenticides To Predatory Wildlife, Barnett A. Rattner, Rebecca S. Lazarus, John E. Elliott, Richard F. Shore, Nico Van Den Brink Jan 2014

Adverse Outcome Pathway And Risks Of Anticoagulant Rodenticides To Predatory Wildlife, Barnett A. Rattner, Rebecca S. Lazarus, John E. Elliott, Richard F. Shore, Nico Van Den Brink

United States Geological Survey: Staff Publications

Despite a long history of successful use, routine application of some anticoagulant rodenticides (ARs) may be at a crossroad due to new regulatory guidelines intended to mitigate risk. An adverse outcome pathway for ARs was developed to identify information gaps and end points to assess the effectiveness of regulations. This framework describes chemical properties of ARs, established macromolecular interactions by inhibition of vitamin K epoxide reductase, cellular responses including altered clotting factor processing and coagulopathy, organ level effects such as hemorrhage, organism responses with linkages to reduced fitness and mortality, and potential consequences to predator populations. Risk assessments have led …

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Toxicity Of Pb‐Contaminated Soil To Japanese Quail (Coturnix Japonica) And The Use Of The Blood–Dietary Pb Slope In Risk Assessment, W. Nelson Beyer, Yu Chen, Paula Henry, Thomas May, David Mosby, Barnett A. Rattner, Valerie I. Shearn-Bochsler, Daniel Sprague, John Weber Jan 2014

Toxicity Of Pb‐Contaminated Soil To Japanese Quail (Coturnix Japonica) And The Use Of The Blood–Dietary Pb Slope In Risk Assessment, W. Nelson Beyer, Yu Chen, Paula Henry, Thomas May, David Mosby, Barnett A. Rattner, Valerie I. Shearn-Bochsler, Daniel Sprague, John Weber

United States Geological Survey: Staff Publications

This study relates tissue concentrations and toxic effects of Pb in Japanese quail (Coturnix japonica) to the dietary exposure of soil‐borne Pb associated with mining and smelting. From 0% to 12% contaminated soil, by weight, was added to 5 experimental diets (0.12 to 382mg Pb/kg, dry wt) and fed to the quail for 6 weeks. Benchmark doses associated with a 50% reduction in delta‐aminolevulinic acid dehydratase activity were 0.62mg Pb/kg in the blood, dry wt, and 27mg Pb/kg in the diet. Benchmark doses associated with a 20% increase in the concentration of erythrocyte protoporphyrin were 2.7mg Pb/kg in …

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Testing Metapopulation Concepts: Effects Of Patch Characteristics And Neighborhood Occupancy On The Dynamics Of An Endangered Lagomorph, Mitchell J. Eaton, Phillip T. Hughes, James E. Hines, James D. Nichols Jan 2014

Testing Metapopulation Concepts: Effects Of Patch Characteristics And Neighborhood Occupancy On The Dynamics Of An Endangered Lagomorph, Mitchell J. Eaton, Phillip T. Hughes, James E. Hines, James D. Nichols

United States Geological Survey: Staff Publications

Metapopulation ecology is a field that is richer in theory than in empirical results. Many existing empirical studies use an incidence function approach based on spatial patterns and key assumptions about extinction and colonization rates. Here we recast these assumptions as hypotheses to be tested using 18 years of historic detection survey data combined with four years of data from a new monitoring program for the Lower Keys marsh rabbit. We developed a new model to estimate probabilities of local extinction and colonization in the presence of nondetection, while accounting for estimated occupancy levels of neighboring patches. We used model …

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Probit Models For Capture-Recapture Data Subject To Imperfect Detection, Individual Heterogeneity And Misidentification, Brett T. Mcclinktock, Larissa L. Bailey, Brian P. Dreher, William A. Link Jan 2014

Probit Models For Capture-Recapture Data Subject To Imperfect Detection, Individual Heterogeneity And Misidentification, Brett T. Mcclinktock, Larissa L. Bailey, Brian P. Dreher, William A. Link

United States Geological Survey: Staff Publications

As noninvasive sampling techniques for animal populations have become more popular, there has been increasing interest in the development of capture-recapture models that can accommodate both imperfect detection and misidentification of individuals (e.g., due to genotyping error). However, current methods do not allow for individual variation in parameters, such as detection or survival probability. Here we develop misidentification models for capture-recapture data that can simultaneously account for temporal variation, behavioral effects and individual heterogeneity in parameters. To facilitate Bayesian inference using our approach, we extend standard probit regression techniques to latent multinomial models where the dimension and zeros of the …

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Testing Metapopulation Concepts: Effects Of Patch Characteristics And Neighborhood Occupancy On The Dynamics Of An Endangered Lagomorph, Mitchell J. Eaton, Phillip T. Hughes, James E. Hines, James D. Nichols Jan 2014

Testing Metapopulation Concepts: Effects Of Patch Characteristics And Neighborhood Occupancy On The Dynamics Of An Endangered Lagomorph, Mitchell J. Eaton, Phillip T. Hughes, James E. Hines, James D. Nichols

United States Geological Survey: Staff Publications

Metapopulation ecology is a field that is richer in theory than in empirical results. Many existing empirical studies use an incidence function approach based on spatial patterns and key assumptions about extinction and colonization rates. Here we recast these assumptions as hypotheses to be tested using 18 years of historic detection survey data combined with four years of data from a new monitoring program for the Lower Keys marsh rabbit. We developed a new model to estimate probabilities of local extinction and colonization in the presence of nondetection, while accounting for estimated occupancy levels of neighboring patches. We used model …

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Probit Models For Capture-Recapture Data Subject To Imperfect Detection, Individual Heterogeneity And Misidentification1, Brett T. Mcclintock, Larissa L. Bailey, Brian P. Dreher, William A. Link Jan 2014

Probit Models For Capture-Recapture Data Subject To Imperfect Detection, Individual Heterogeneity And Misidentification1, Brett T. Mcclintock, Larissa L. Bailey, Brian P. Dreher, William A. Link

United States Geological Survey: Staff Publications

As noninvasive sampling techniques for animal populations have become more popular, there has been increasing interest in the development of capture-recapture models that can accommodate both imperfect detection and misidentification of individuals (e.g., due to genotyping error). However, current methods do not allow for individual variation in parameters, such as detection or survival probability. Here we develop misidentification models for capture-recapture data that can simultaneously account for temporal variation, behavioral effects and individual heterogeneity in parameters. To facilitate Bayesian inference using our approach, we extended standard probit regression techniques to latent multinomial models where the dimension and zeros of the …

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Evidence Of Songbird Intoxication From Rozol Application At A Black-Tailed Prairie Dog Colony, Nimish B. Vyas, Craig S. Hulse, Carol U. Meteyer, Clifford P. Rice Jun 2013

Evidence Of Songbird Intoxication From Rozol Application At A Black-Tailed Prairie Dog Colony, Nimish B. Vyas, Craig S. Hulse, Carol U. Meteyer, Clifford P. Rice

United States Geological Survey: Staff Publications

Concerns about avian poisonings from anticoagulant rodenticides have traditionally focused on secondary poisoning of raptors exposed by feeding on contaminated mammalian prey. However, ground foraging songbirds can be directly poisoned from operational applications of the anticoagulant rodenticide RozolH (0.005% chlorophacinone, active ingredient) applied as a grain bait, at black-tailed prairie dog Cynomys ludovicianus colonies. A dead western meadowlark Sturnella neglecta recovered from the study prairie dog colony displayed hemorrhaging in brain and pectoral muscle tissue, and it contained chlorophacinone residue concentrations of 0.59 and 0.49 mg/g (wet weight) in the liver and intestinal contents, respectively. Chlorophacinone residues from two Rozol-colored …

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Influence Of Management And Precipitation On Carbon Fluxes In Great Plains Grasslands, Matthew Rigge, Bruce K. Wylie, Li Zhang, Stephen P. Boyte Jan 2013

Influence Of Management And Precipitation On Carbon Fluxes In Great Plains Grasslands, Matthew Rigge, Bruce K. Wylie, Li Zhang, Stephen P. Boyte

United States Geological Survey: Staff Publications

Suitable management and sufficient precipitation on grasslands can provide carbon sinks. The net carbon accumulation of a site from the atmosphere, modeled as the Net Ecosystem Productivity (NEP), is a useful means to gauge carbon balance. Previous research has developed methods to integrate flux tower data with satellite biophysical datasets to estimate NEP across large regions. A related method uses the Ecosystem Performance Anomaly (EPA) as a satellite-derived indicator of disturbance intensity (e.g., livestock stocking rate, fire, and insect damage). To better understand the interactions among management, climate, and carbon dynamics, we evaluated the relationship between EPA and NEP data …

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Modeling Rain-Fed Maize Vulnerability To Droughts Using The Standardized Precipitation Index From Satellite Estimated Rainfall-Southern Malawi Case Study, Harikishan Jayanthi, Gregory J. Husak, Chris Funk, Tamuka Magadzire, Adams Chavula, James P. Verdin Jan 2013

Modeling Rain-Fed Maize Vulnerability To Droughts Using The Standardized Precipitation Index From Satellite Estimated Rainfall-Southern Malawi Case Study, Harikishan Jayanthi, Gregory J. Husak, Chris Funk, Tamuka Magadzire, Adams Chavula, James P. Verdin

United States Geological Survey: Staff Publications

During 1990s, disaster risk reduction emerged as a novel, proactive approach to managing risks from natural hazards. The World Bank, USAlD, and other international donor agencies began making efforts to mainstream disaster risk reduction in countries whose population and economies were heavily dependent on rain-fed agriculture. This approach has more significance in light of the increasing climatic hazard patterns and the climate scenarios projected for different hazard prone countries in the world. The Famine Early Warning System Network (FEWS NET) has been monitoring the food security issues in the sub-Saharan Africa, Asia and in Haiti. FEWS NET monitors the rainfall …

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Characterizing Ledaps Surface Reflectance Products By Comparisons With Aeronet, Field Spectrometer, And Modis Data, T.K. Maiersperger, P.L. Scaramuzza, L. Leigh, S. Shrestha, K.P. Gallo, C.B. Jenkerson, J.L. Dwyer Jan 2013

Characterizing Ledaps Surface Reflectance Products By Comparisons With Aeronet, Field Spectrometer, And Modis Data, T.K. Maiersperger, P.L. Scaramuzza, L. Leigh, S. Shrestha, K.P. Gallo, C.B. Jenkerson, J.L. Dwyer

United States Geological Survey: Staff Publications

This study provides a baseline quality check on provisional Landsat Surface Reflectance (SR) products as generated by the U.S. Geological Survey (USGS) Earth Resources Observation and Science (EROS) Center using Landsat Ecosystem Disturbance Adaptive Processing System (LEDAPS) software. Characterization of the Landsat SR products leveraged comparisons between aerosol optical thickness derived from LEDAPS and measured by Aerosol Robotic Network (AERONET), as well as reflectance correlations with field spectrometer and Moderate Resolution Imaging Spectroradiometer (MODIS) data. Results consistently indicated similarity between LEDAPS and alternative data products in longer wavelengths over vegetated areas with no adjacent water, while less reliable performance was …

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Impacts Of Migratory Sandhill Cranes (Grus Canadensis) On Microbial Water Quality In The Central Platte River, Nebraska, Usa, Jason R. Vogel, Dale W. Griffin, Hon S. Ip, Nicholas J. Ashbolt, Matthew T. Moser, Jingrang Lu, Mary K. Beitz, Hodon Ryu, Jorge W. Santo Domingo Jan 2013

Impacts Of Migratory Sandhill Cranes (Grus Canadensis) On Microbial Water Quality In The Central Platte River, Nebraska, Usa, Jason R. Vogel, Dale W. Griffin, Hon S. Ip, Nicholas J. Ashbolt, Matthew T. Moser, Jingrang Lu, Mary K. Beitz, Hodon Ryu, Jorge W. Santo Domingo

United States Geological Survey: Staff Publications

Wild birds have been shown to be significant sources of numerous types of pathogens that are relevant to humans and agriculture. The presence of large numbers of migratory birds in such a sensitive and important ecosystem as the Platte River in central Nebraska, USA, could potentially serve a significant source of birdderived pathogens in the water/sediment and riverine environment. In 2009 and 2010, a study was completed to investigate the potential water-quality impacts of Sandhill Cranes and Snow Geese on the microbial water quality of the central Platte River during their spring migration period. Fecal material, river-bottom sediment, and water …

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