Earth Sciences Commons^™

The Influence Of Isolated Thunderstorms And The Low-Level Wind Field On Nocturnally Migrating Birds In Central North America, Matthew S. Van Den Broeke, Timothy J. Gunkel

Department of Earth and Atmospheric Sciences: Faculty Publications

Seasonal bird migration occurs on large spatial scales and is influenced by many factors including weather conditions. Weather can include thunderstorms, which may force migrants to land or cause them to reroute a migration path. In this study, a sample of isolated thunderstorms was analyzed from the domains of three weather radars in the central United States to test hypotheses regarding the influence of thunderstorms on the distribution of migrants. Migrating bird density was often reduced in the wake of storms, and this wake reduction was typically more pronounced for larger, more intense and faster- moving storms, particularly in eastern …

The Fluxnet2015 Dataset And The Oneflux Processing Pipeline For Eddy Covariance Data, Gilberto Pastorello, Timothy Arkebauer, Dave P. Billesbach, Anatoly Gitelson, Adam Liska, Andrew Suyker, Elizabeth Walter-Shea, More Than 200 Other

Adam Liska Papers

The FLUXNET2015 dataset provides ecosystem-scale data on CO2, water, and energy exchange between the biosphere and the atmosphere, and other meteorological and biological measurements, from 212 sites around the globe (over 1500 site-years, up to and including year 2014). These sites, independently managed and operated, voluntarily contributed their data to create global datasets. Data were quality controlled and processed using uniform methods, to improve consistency and intercomparability across sites. The dataset is already being used in a number of applications, including ecophysiology studies, remote sensing studies, and development of ecosystem and Earth system models. FLUXNET2015 includes derived-data products, such as …

Acoustic Space Occupancy: Combining Ecoacoustics And Lidar To Model Biodiversity Variation And Detection Bias Across Heterogeneous Landscapes, Danielle I. Rappaport, J. Andrew Royle, Douglas C. Morton

United States Geological Survey: Staff Publications

There is global interest in quantifying changing biodiversity in human-modified landscapes. Ecoacoustics may offer a promising pathway for supporting multi-taxa monitoring, but its scalability has been hampered by the sonic complexity of biodiverse ecosystems and the imperfect detectability of animal-generated sounds. The acoustic signature of a habitat, or soundscape, contains information about multiple taxa and may circumvent species identification, but robust statistical technology for characterizing community-level attributes is lacking. Here, we present the Acoustic Space Occupancy Model, a flexible hierarchical framework designed to account for detection artifacts from acoustic surveys in order to model biologically relevant variation in acoustic space …

Human-Associated Species Dominate Passerine Communities Across The United States, Helen R. Sofaer, Curtis H. Flather, Catherine S. Jarnevich, Kristin P. Davis

United States Geological Survey: Staff Publications

Aim: Human development and agriculture can have transformative and homogenizing effects on natural systems, shifting the composition of ecological communities towards non-native and native species that tolerate or thrive under human-dominated conditions. These impacts cannot be fully captured by summarizing species presence, as they include dramatic changes to patterns of species abundance. However, how human land use patterns and species invasions intersect to shape patterns of abundance and dominance within ecological communities is poorly understood even in well-known taxa.

Location: Conterminous United States.

Time period: 2010–2012.

Major taxa studied: Passeriformes.

Methods: We analyse continental-scale monitoring data to study the proportional …

Late Quaternary Sea-Level History Of Saipan, Commonwealth Of The Northern Mariana Islands, Usa: A Test Of Tectonic Uplift And Glacial Isostatic Adjustment Models, Daniel R. Muhs, Eugene S. Schweig, Kathleen R. Simmons

United States Geological Survey: Staff Publications

In 1979, S. Uyeda and H. Kanamori proposed a tectonic model with two end members of a subduction-boundary continuum: the “Chilean” type (shallow dip of the subducting plate, great thrust events, compression, and uplift of the overriding plate) and a “Mariana” type (steep dip of the subducting plate, no great thrust events, tension, and no uplift). This concept has been used to explain variable rates of Quaternary uplift around the Pacific Rim, yet no uplift rates have been determined for the Mariana Islands themselves, one of the end members in this model. We studied the late Quaternary Tanapag Limestone, which …

Uptake, Metabolism, And Elimination Of Fungicides From Coated Wheat Seeds In Japanese Quail (Coturnix Japonica), Michael S. Gross, Thomas G. Bean, Michelle L. Hladik, Barnett A. Rattner, Kathryn M. Kuivila

United States Geological Survey: Staff Publications

Pesticides coated to the seed surface potentially pose an ecological risk to granivorous birds that consume incompletely buried or spilled seeds. To assess the toxicokinetics of seeds treated with current-use fungicides, Japanese quail ( Coturnix japonica) were orally dosed with commercially coated wheat seeds. Quail were exposed to metalaxyl, tebuconazole, and fludioxonil at either a low dose (0.0655, 0.0308, and 0.0328 mg/kg of body weight, respectively) or a high dose (0.196, 0.0925, and 0.0985 mg/kg of body weight, respectively). Fungicides were rapidly absorbed and distributed to tissues. Tebuconazole was metabolized into tert-butylhydroxy-tebuconazole. All compounds were eliminated to below detection limits …

Human-Associated Species Dominate Passerine Communities Across The United States, Helen R. Sofaer, Curtis H. Flather, Catherine S. Jarnevich, Kristin P. Davis, Liba Pejchar

United States Geological Survey: Staff Publications

Aim: Human development and agriculture can have transformative and homogenizing effects on natural systems, shifting the composition of ecological communities towards non-native and native species that tolerate or thrive under human-dominated conditions. These impacts cannot be fully captured by summarizing species presence, as they include dramatic changes to patterns of species abundance. However, how human land use patterns and species invasions intersect to shape patterns of abundance and dominance within ecological communities is poorly understood even in well-known taxa.

Location: Conterminous United States.

Time period: 2010–2012.

Major taxa studied: Passeriformes.

Methods: We analyse continental-scale monitoring data to study the proportional …

Ecosystem Processes, Land Cover, Climate, And Human Settlement Shape Dynamic Distributions For Golden Eagle Across The Western Us, J.D. Tack, Barry R. Noon, Zachary Bowen, Brad C. Fedy

United States Geological Survey: Staff Publications

Species–environment relationships for highly mobile species outside of the breeding season are often highly dynamic in response to the collective effects of everchanging climatic conditions, food resources, and anthropogenic disturbance. Capturing dynamic space-use patterns in a model-based framework is critical as model inference often drives place-based conservation planning. We applied dynamic occupancy models to broad-scale golden eagle Aquila chrysaetos survey data collected annually from 2006 to 2012 during the late summer post-fledging period in the western US. We defined survey sites as 10 km transect segments with a 1 km buffer on either transect side (n = 3540). Derived estimates …

Acoustic Space Occupancy: Combining Ecoacoustics And Lidar To Model Biodiversity Variation And Detection Bias Across Heterogeneous Landscapes, Danielle I. Rappaport, J. Andrew Royle, Douglas C. Morton

United States Geological Survey: Staff Publications

There is global interest in quantifying changing biodiversity in human-modified landscapes. Ecoacoustics may offer a promising pathway for supporting multi-taxa monitoring, but its scalability has been hampered by the sonic complexity of biodiverse ecosystems and the imperfect detectability of animal-generated sounds. The acoustic signature of a habitat, or soundscape, contains information about multiple taxa and may circumvent species identification, but robust statistical technology for characterizing community-level attributes is lacking. Here, we present the Acoustic Space Occupancy Model, a flexible hierarchical framework designed to account for detection artifacts from acoustic surveys in order to model biologically relevant variation in acoustic space …

Characterization Of Pallid Sturgeon (Scaphirhynchus Albus) Spawning Habitat In The Lower Missouri River, Caroline M. Elliott, Aaron J. Delonay, Kimberly Chojnacki, Robert B. Jacobson

United States Geological Survey: Staff Publications

Acipenseriformes (sturgeons and paddlefish) globally have declined throughout their range due to river fragmentation, habitat loss, overfishing, and degradation of water quality. In North America, pallid sturgeon (Scaphirhynchus albus) populations have experienced poor to no recruitment, or substantial levels of hybridization with the closely related shovelnose sturgeon (S. platorynchus). The Lower Missouri River is the only portion of the species’ range where successful reproduction and recruitment of genetically pure pallid sturgeon have been documented. This paper documents spawning habitat and behavior on the Lower Missouri River, which comprises over 1,300 km of unfragmented river habitat. The …

Mid‐Holocene Grounding Line Retreat And Readvance At Whillans Ice Stream, West Antarctica, R. A. Venturelli, M. R. Siegfried, K. A. Roush, W. Li, J. Burnett, Robert Zook, H. A. Fricker, J. C. Priscu, A. Leventer, B. E. Rosenheim

Department of Earth and Atmospheric Sciences: Faculty Publications

Understanding ice sheet evolution through the geologic past can help constrain ice sheet models that predict future ice dynamics. Existing geological records of grounding line retreat in the Ross Sea, Antarctica, have been confined to ice‐free and terrestrial archives, which reflect dynamics from periods of more extensive ice cover. Therefore, our perspective of grounding line retreat since the Last Glacial Maximum remains incomplete. Sediments beneath Ross Ice Shelf and grounded ice offer complementary insight into the southernmost extent of grounding line retreat, yielding a more complete view of ice dynamics during deglaciation. Here we thermochemically separate the youngest organic carbon …

Assessing Agricultural Risk Management Using Historic Crop Insurance Loss Data Over The Ogallala Aquifer, Julian Reyes, Emile Elias, Erin M.K. Haacker, Amy Kremen, Lauren Parker, Caitlin Rottler

Department of Earth and Atmospheric Sciences: Faculty Publications

Much of the agricultural production in the Ogallala Aquifer region relies on groundwater for irrigation. In addition to declining water levels, weather and climate-driven events affect crop yields and revenues. Crop insurance serves as a risk management tool to mitigate these perils. Here, we seek to understand what long-term crop insurance loss data can tell us about agricultural risk management in the Ogallala. We assess patterns and trends in crop insurance loss data from the U.S. Department of Agriculture Risk Management Agency. Indemnities, or insurance payments, totaled $22 billion from 1989–2017 for the 161 counties that overlie the Ogallala Aquifer. …

At: A Hydro-Economic Modeling Framework For Aquifer Management In Irrigated Agricultural Regions☆, Mani Rouhi Rad, Erin M.K. Haacker, Vaishali Sharda, Soheil Nozari, Zaichen Xiang, A. Araya, Venkatesh Uddameri, Jordan F. Suter, Prasanna Gowda

Department of Earth and Atmospheric Sciences: Faculty Publications

In this paper, we introduce a hydro-economic modeling framework for the management of groundwater resources that are used for irrigated agricultural production. The model, MOD$$AT, can be used to study the costs of aquifer depletion and the net benefits of specific aquifer management policies. MOD$$AT is composed of three components, namely, an economic component, a hydrologic component and an agronomic component. A main goal of this paper is to introduce the hydro-economic model and describe how it can be transferable to different contexts. With this objective in mind, we describe model components step-by-step so that the process of integration can …

Spatial And Temporal Ecological Uniqueness Of Andean Diatom Communities Are Correlated With Climate, Geodiversity And Long-Term Limnological Change, Xavier Benito, Annika Vilmi, Melina Luethje, Maria Laura Carrevedo, Marja Lindholm, Sherilyn C. Fritz

Department of Earth and Atmospheric Sciences: Faculty Publications

High-elevation tropical lakes are excellent sentinels of global change impacts, such as climate warming, land-use change, and atmospheric deposition. These effects are often correlated with temporal and spatial beta diversity patterns, with some local communities contributing more than others, a phenomenon known as local contribution to beta diversity (LCBD) or ecological uniqueness. Microorganisms, such as diatoms, are considered whole-ecosystem indicators, but little is known about their sensitivity and specificity in beta diversity studies mostly because of the lack of large spatial and temporal datasets. To fill this gap, we used a tropical South American diatom database comprising modern (144 lakes) …

Disdrometer, Polarimetric Radar, And Condensation Nuclei Observations Of Supercell And Multicell Storms On 11 June 2018 In Eastern Nebraska, Matthew S. Van Den Broeke

Department of Earth and Atmospheric Sciences: Faculty Publications

Disdrometer and condensation nuclei (CN) data are compared with operational polarimetric radar data for one multicell and one supercell storm in eastern Nebraska on 11 June 2018. The radar was located ~14.3 km from the instrumentation location and provided excellent observation time series with new low-level samples every 1–2 min. Reflectivity derived by the disdrometer and radar compared well, especially in regions with high number concentration of drops and reflectivity <45 dBZ. Differential reflectivity also compared well between the datasets, though it was most similar in the supercell storm. Rain rate calculated by the disdrometer closely matched values estimated by the radar when reflectivity and differential reflectivity were used to produce the estimate. Concentration of CN generally followed precipitation intensity for the leading convective cell, with evidence for higher particle concentration on the edges of the convective cell associated with outflow. The distribution of CN in the supercell was more complex and generally did not follow precipitation intensity.

Mod$$At: A Hydro-Economic Modeling Framework For Aquifer Management In Irrigated Agricultural Regions, Mani Rouhi Rad, Erin M.K. Haacker, Vaishali Sharda, Soheil Nozari, Zaichen Xiang, A. Araya, Venkatesh Uddameri, Jordan Suter, Prasanna Gowda

Department of Earth and Atmospheric Sciences: Faculty Publications

In this paper, we introduce a hydro-economic modeling framework for the management of groundwater re- sources that are used for irrigated agricultural production. The model, MOD$$AT, can be used to study the costs of aquifer depletion and the net benefits of specific aquifer management policies. MOD$$AT is composed of three components, namely, an economic component, a hydrologic component and an agronomic component. A main goal of this paper is to introduce the hydro-economic model and describe how it can be transferable to different contexts. With this objective in mind, we describe model components step-by-step so that the process of integration …

The Influence Of Isolated Thunderstorms And The Low-Level Wind Field On Nocturnally Migrating Birds In Central North America, Matthew V.D. Broeke, Timothy J. Gunkel

Department of Earth and Atmospheric Sciences: Faculty Publications

Seasonal bird migration occurs on large spatial scales and is influenced by many factors including weather conditions. Weather can include thunderstorms, which may force migrants to land or cause them to reroute a migration path. In this study, a sample of isolated thunderstorms was analyzed from the domains of three weather radars in the central United States to test hypotheses regarding the influence of thunderstorms on the distribution of migrants. Migrating bird density was often reduced in the wake of storms, and this wake reduction was typically more pronounced for larger, more intense and faster- moving storms, particularly in eastern …

Controls On Channel Deposits Of Highly Variable Rivers: Comparing Hydrology And Event Deposits In The Burdekin River, Australia, Jan Alexander, Christopher M. Herbert, Christopher R. Fielding, Kathryn J. Amos

Department of Earth and Atmospheric Sciences: Faculty Publications

Discharge event frequency, magnitude and duration all control river chan- nel morphology and sedimentary architecture. Uncertainty persists as to whether alluvial deposits in the rock record are a time-averaged amalgam from all discharge events, or a biased record of larger events. This paper investigates the controls on channel deposit character and subsurface strati- graphic architecture in a river with seasonal discharge and very high inter- annual variability, the Burdekin River of north-east Australia. In such rivers, most sediment movement is restricted to a few days each year and at other times little sediment moves. However, the maximum discharge magnitude does …

End-Permian (252 Mya) Deforestation, Wildfires And Flooding—An Ancient Biotic Crisis With Lessons For The Present, Vivi Vajda, Stephen Mcloughlin, Chris Mays, Tracy D. Frank, Christopher R. Fielding, Allen Tevyaw, Veiko Lehsten, Malcolm Bocking, Robert S. Nicoll

Department of Earth and Atmospheric Sciences: Faculty Publications

Current large-scale deforestation poses a threat to ecosystems globally, and imposes substantial and prolonged changes on the hydrological and carbon cycles. The tropical forests of the Amazon and Indonesia are currently undergoing deforestation with catastrophic ecological consequences but widespread deforestation events have occurred several times in Earth’s history and these provide lessons for the future. The end-Permian mass-extinction event (EPE; ∼252 Ma) provides a global, deep-time analogue for modern deforestation and diversity loss. We undertook centimeter-resolution palynological, sedimentological, carbon stable-isotope and paleobotanical investigations of strata spanning the end- Permian event at the Frazer Beach and Snapper Point localities, in the …

Data Generated During The 2018 Lapse-Rate Campaign: An Introduction And Overview, Gijs De Boer, Adam Houston, Et Al.

Department of Earth and Atmospheric Sciences: Faculty Publications

Unmanned aircraft systems (UASs) offer innovative capabilities for providing new perspectives on the atmosphere, and therefore atmospheric scientists are rapidly expanding their use, particularly for studying the planetary boundary layer. In support of this expansion, from 14 to 20 July 2018 the International Society for Atmospheric Research using Remotely piloted Aircraft (ISARRA) hosted a community flight week, dubbed the Lower Atmospheric Profiling Studies at Elevation – a Remotely-piloted Aircraft Team Experiment (LAPSE- RATE; de Boer et al., 2020a). This field campaign spanned a 1-week deployment to Colorado’s San Luis Valley, involving over 100 students, scientists, engineers, pilots, and outreach coordinators. …

Interpretive Geologic Maps And Cross Sections For Phelps, Kearney, And Adams Counties In Nebraska, Dana Divine, Leslie M. Howard

Conservation and Survey Division: Faculty and Staff Publications

Data from thousands of test-hole and well logs were interpreted to improve understanding and management of the High Plains aquifer in a three-county study area adjacent to the Big Bend reach of the Platte River. Five principal conclusions resulted from these interpretations: (1) the extent of Neogene Ogallala deposits beneath the study area is different than previously mapped; (2) a large paleovalley incised into Cretaceous bedrock probably cuts across Kearney and Adams counties and may be the course of the ancestral Platte River prior to formation of the Big Bend; (3) a groundwater mound created by irrigation canals artificially raises …

2019 Nebraska Water Leaders Academy Final Report, M.E. Burbach, R.M. Joeckel, G.S. Matkin

Conservation and Survey Division: Faculty and Staff Publications

No abstract provided.

Correlating The Plant Height Of Wheat With Above-Ground Biomass And Crop Yield Using Drone Imagery And Crop Surface Model, A Case Study From Nepal, U. S. Panday, Nawaraj Shrestha, S. Maharjan, A. K. Pratihast, Shahnawaz, K. L. Shrestha, J. Aryal

Conservation and Survey Division: Faculty and Staff Publications

No abstract provided.

Integrating Lidar Data And Multi-Temporal Aerial Imagery To Map Wetland Inundation Dynamics Using Google Earth Engine, Qiusheng Wu, Charles B. Lane, Xuecao Li, Kaiguang Zhao, Yuyu Zhou, Nicholas Clinton, Ben Devries, Heather E. Golden, Megan W. Lang

United States Environmental Protection Agency: Publications

The Prairie Pothole Region of North America is characterized by millions of depressional wetlands, which provide critical habitats for globally significant populations of migratory waterfowl and other wildlife species. Due to their relatively small size and shallow depth, these wetlands are highly sensitive to climate variability and anthropogenic changes, exhibiting inter- and intra-annual inundation dynamics. Moderate-resolution satellite imagery (e.g., Landsat, Sentinel) alone cannot be used to effectively delineate these small depressional wetlands. By integrating fine spatial resolution Light Detection and Ranging (LiDAR) data and multi-temporal (2009–2017) aerial images, we developed a fully automated approach to delineate wetland inundation extent at …

Resolving Time-Space Histories Of Late Cenozoic Bedrock Incision Along The Upper Colorado River, Usa, Andres Aslan, Karl E. Karlstrom, Eric Kirby, Matthew T. Heizler, Darryl E. Granger, James K. Feathers, Paul R. Hanson, Shannon A. Mahan

School of Natural Resources: Faculty Publications

The upper Colorado River basin drains the western slope of the Rocky Mountains province of North America and hosts a rich record of fluvial terraces and volcanic deposits that provide an archive of bedrock river incision since the Late Miocene. Here we present new geochronology from fluvial deposits and associated volcanic units using multiple methods (luminescence, cosmogenic-burial, 40Ar/39Ar basalt and detrital sanidine, and U/Pb detrital zircon) to reconstruct a detailed record of bedrock incision in the upper Colorado River over timescales ranging from Miocene to Late Pleistocene. Late Miocene (ca. 11–8 Ma) basalt flows perched 800–1700 m above the Colorado …

A Climatology Of Snowpack In The Southern Rocky Mountains And Snow To Liquid Ratio Forecasting Techniques Using Model Generated Soundings From The Rapid Refresh Model, Carson Jones

Department of Earth and Atmospheric Sciences: Dissertations, Theses, and Student Research

Mountainous snowpack represents up to 70% of the total water resources for areas in the western United States. Temperature and precipitation control the accumulation and ablation of the snowpack throughout the cold season, both of which are subject to a changing climate. This study will use a network of snow telemetry (SNOTEL) stations to investigate changes in the snowpack season, snow water equivalent (SWE), and temperature in the southern Rocky Mountain region. Additionally, this study will use model generated soundings from the Rapid Refresh (RAP) model to establish relationships between the depth and cloud proportion of ice crystal growth layers, …

Improving Aquifer Characterization Through Integration Of Airborne Electromagnetics (Aem) And Well Hydrographs, Jacqueline Polashek

School of Natural Resources: Dissertations, Theses, and Student Research

The objective of this study is to evaluate methods of hydrostratigraphic modeling using geophysics and well hydrographs at the eastern edge of the High Plains aquifer (HPA) in Platte and Colfax counties within Nebraska, USA. The HPA is very heterogeneous in the study area, being hosted by architecturally complex glacial sediments and having many irregular hydraulic boundaries. Further, the HPA exhibits local variations between unconfined and confined conditions. Pumping in such bounded aquifers can be unsustainable because of cost increases and lost agricultural productivity. Moreover, the large drawdowns typical of confined aquifers can contribute to well interference during heavy pumping. …

Umphlett Qci Dec 2019, Natalie A. Umphlett

High Plains Regional Climate Center: Staff Publications

Highlights for the Basin

Temperature and Precipitation Anomalies

Soil Moisture Conditions

Agriculture

Energy

Infrastructure

Temperature

Precipitation

Small Ruminant Health Intervention Calendar In Ethiopia, Mesfin Mekonnen, Ayalew Assefa, Tesfalem Nane, Firdawok Ayele, Asrat Arke, Belay Elias, Barbara Wieland

Daugherty Water for Food Global Institute: Faculty Publications

Contents

1 Background................................................................................................... 3
2 Developing the health intervention calendar............................................................ 4
The treatment calendar ......................................................... 4 Applying the calendar..................................................................... 5 4 References................................................................... 8

Vegetation Classification And Mapping, Missouri National Recreational River, Tom Baldvins, Matt Ley, David Jones, Joe Stevens, Hannah Pilkington

United States National Park Service: Publications

Executive Summary

The vegetation inventory project at Missouri National Recreational River (MNRR) classified and mapped vegetation within the park administrative boundary and estimated thematic map accuracy quantitatively. The project was conducted over a four year period from the summer of 2015 to the winter of 2019.

The project follows guidance provided by the National Park Service (NPS) Vegetation Mapping Inventory (VMI) Program. The overall process includes initial planning and scoping, imagery procurement, field data collection, data analysis, imagery interpretation and classification, and accuracy assessment. The initial planning and scoping meetings to support study plan development took place in December, 2009, …