Earth Sciences Commons^™

Taxonomic Relationships Among Phenacomys Voles As Inferred By Cytochrome B, M. Renee Bellinger, Susan M. Haig, Eric D. Forsman, Thomas D. Mullins

United States Geological Survey: Staff Publications

Taxonomic relationships among red tree voles (Phenacomys longicaudus longicaudus, P. l. silvicola), the Sonoma tree vole (P. pomo), the white-footed vole (P. albipes), and the heather vole (P. intermedius) were examined using 664 base pairs of the mitochondrial cytochrome b gene. Results indicate specific differences among red tree voles, Sonoma tree voles, white-footed voles, and heather voles, but no clear difference between the 2 Oregon subspecies of red tree voles (P. l. longicaudus and P. l. silvicola). Our data further indicated a close relationship between tree voles and albipes, …

Comparison Of Individual And Pooled Sampling Methods For Detecting Bacterial Pathogens Of Fish, Sonia Mumford, Chris Patterson, Joy Evered, Ray Brunson, Jay Levine, Jim Winton

United States Geological Survey: Staff Publications

Examination of finfish populations for viral and bacterial pathogens is an important component of fish disease control programs worldwide. Two methods are commonly used for collecting tissue samples for bacteriological culture, the currently accepted standards for detection of bacterial fish pathogens. The method specified in the Office International des Epizooties Manual of Diagnostic Tests for Aquatic Animals permits combining renal and splenic tissues from as many as 5 fish into pooled samples. The American Fisheries Society (AFS) Blue Book/US Fish and Wildlife Service (USFWS) Inspection Manual specifies the use of a bacteriological loop for collecting samples from the kidney of …

Discovering Associations Between Climatic And Oceanic Parameters To Monitor Drought In Nebraska Using Data-Mining Techniques, Tsegaye Tadesse, Donald A. Wilhite, Michael J. Hayes, Steve Goddard

National Drought Mitigation Center: Faculty Publications

Drought is a complex natural hazard that is best characterized by multiple climatological and hydrological parameters. Improving our understanding of the relationships between these parameters is necessary to reduce the impacts of drought. Data mining is a recently developed technique that can be used to interact with large databases and assist in the discovery of associations between drought and oceanic data by extracting information from massive and multiple data archives. In this study, a new data-mining algorithm [i.e., Minimal Occurrences With Constraints and Time Lags (MOWCATL)] has been used to identify the relationships between oceanic parameters and drought indices. Rather …

Auditory Brainstem Responses In The Eastern Screech Owl: An Estimate Of Auditory Thresholds, Elizabeth F. Brittan-Powell, Bernard Lohr, D. Caldwell Hahn, Robert J. Dooling

United States Geological Survey: Staff Publications

The auditory brainstem response (ABR), a measure of neural synchrony, was used to estimate auditory sensitivity in the eastern screech owl (Megascops asio). The typical screech owl ABR waveform showed two to three prominent peaks occurring within 5 ms of stimulus onset. As sound pressure levels increased, the ABR peak amplitude increased and latency decreased. With an increasing stimulus presentation rate, ABR peak amplitude decreased and latency increased. Generally, changes in the ABR waveform to stimulus intensity and repetition rate are consistent with the pattern found in several avian families. The ABR audiogram shows that screech owls hear best between …

Monsoon-Driven Biogeochemical Processes In The Arabian Sea, Jerry D. Wiggert, Raleigh Hood, Karl Banse, John Kindle

Faculty Publications

Although it is nominally a tropical locale, the semiannual wind reversals associated with the Monsoon system of the Arabian Sea result annually in two distinct periods of elevated biological activity. While in both cases monsoonal forcing drives surface layer nutrient enrichment that supports increased rates of primary productivity, fundamentally different entrainment mechanisms are operating in summer (Southwest) and winter (Northeast) Monsoons. Moreover, the intervening intermonsoon periods, during which the region relaxes toward oligotrophic conditions more typical of tropical environments, provide a stark contrast to the dynamic biogeochemical activity of the monsoons. The resulting spatial and temporal variability is great and …

Key Grazing Levels (Foo Targets) For Pasture And Sheep Management, Department Of Agriculture, Western Australia

Animal production and livestock published reports

Food On Offer (FOO) is the amount of pasture in front of an animal, and is measured in kilograms Dry Matter per hectare. Managing pastures to key grazing levels - or FOO targets - can result in improved production of grazing systems in Mediterranean environments which are characterized by slow winter growth, peak spring growth and dry summers. These targets vary according to what production response is required.

This information sheet illustrates key target FOO for sheep grazing annual pastures during autumn and spring.

Late-Holocene Flooding And Drought In The Northern Great Plains, Usa, Reconstructed From Tree Rings, Lake Sediments And Ancient Shorelines, M. D. Shapley, W. C. Johnson, D. R. Engstrom, W. R. Osterkamp

United States Geological Survey: Staff Publications

During the AD 1990s the Waubay Lakes complex in eastern South Dakota experienced historically unprecedented high water levels. Property damage from this flooding led to an examination of the occurrence of past pluvial episodes and their relation to climate. A lOOO-year hydroclimate reconstruction was developed from local bur oak (Quercus macrocarpa) tree-ring records and lake-sediment cores. Analysis of lake shoreline and drainage features provides late-Quaternary geomorphic context for this high-resolution record. Tree-ring width and shell geochemistry of the ostracode Candona rawsoni show marked coherence, indicating synchronous responses to moisture balance in vegetation and lake salinity; geomorphic evidence …

Iron In The Sargasso Sea (Bermuda Atlantic Time-Series Study Region) During Summer: Eolian Imprint, Spatiotemporal Variability, And Ecological Implications, Peter N. Sedwick, T. M. Church, A. R. Bowie, C. M. Marsay, S. J. Ussher, K. M. Achilles, P. J. Lethaby, R. J. Johnson, M. M. Sarin, D. J. Mcgillicuddy

OES Faculty Publications

We report iron measurements for water column and aerosol samples collected in the Sargasso Sea during July-August 2003 (summer 2003) and April-May 2004 (spring 2004). Our data reveal a large seasonal change in the dissolved iron (dFe) concentration of surface waters in the Bermuda Atlantic Time-series Study region, from ∼1-2nM in summer 2003, when aerosol iron concentrations were high (mean 10 nmol/m^-3), to ∼0.1-0.2nM in spring 2004, when aerosol iron concentrations were low (mean 0.64 nmol/m^-3). During summer 2003, we observed an increase of ∼0.6nM in surface water dFe concentrations over 13 days, presumably due to …

A Unique Seasonal Pattern In Phytoplankton Biomass In Low-Latitude Waters In The South China Sea, Chun-Mao Tseng, George T. F. Wong, I.-I. Lin, C.-R. Wu, K.-K. Liu

OES Faculty Publications

A distinctive seasonal pattern in phytoplankton biomass was observed at the South East Asian Time series Study (SEATS) station (18°N, 116°E) in the northern South China Sea (SCS). Surface chlorophyll-a, depth integrated chlorophyll-a and primary production were elevated to 0.3 mg/m³, ~35 mg/m² and 300 mg-C/m²/d, respectively, in the winter but stayed low, at 0.1 mg/m³, ~15 mg/m² and 110 mg-C/m²/d as commonly found in other low latitude waters, in the rest of the year. Concomitantly, soluble reactive phosphate and nitrate+nitrite in the mixed layer also became …

Hydrographic And Biological Changes In The Taiwan Strait During The 1997-1998 El Niño Winter, S. Shang, C. Zhang, H. Hong, Q. Liu, G. T. F. Wong, C. Hu, B. Huang

OES Faculty Publications

During the 1997–1998 El Niño event, the average sea surface temperature (SST) in the Taiwan Strait (TWS) in the winter was ~1.4°C higher than that of the winter climatological mean. The areal ratio of the warm water (≥2°C above the regional mean) to the cold water (≥2°C below the regional mean) in the TWS increased by 25% while the area of the eutrophic water (chlorophyll a >1 mg m^-3) was halved. Field observations also indicate that the mixed layer in the TWS became more nutrient-poor during this winter. These observations are consistent with a diminished advection of the …

Variability Of Sea Ice Cover In The Chukchi Sea (Western Arctic Ocean) During The Holocene, Anne De Vernal, Claude Hillaire-Marcel, Dennis A. Darby

OES Faculty Publications

Dinocysts from cores collected in the Chukchi Sea from the shelf edge to the lower slope were used to reconstruct changes in sea surface conditions and sea ice cover using modern analogue techniques. Holocene sequences have been recovered in a down-slope core (B15: 2135 m, 75°44'N, sedimentation rate of ~1cm kyr-¹) and in a shelf core (P1: 201 m, 73°41'N, sedimentation rate of ~22 cm kyr^-1). The shelf record spanning about 8000 years suggests high-frequency centennial oscillations of sea surface conditions and a significant reduction of the sea ice at circa 6000 and 2500 calendar (cal) …

Burial Of Terrestrial Organic Matter In Marine Sediments: A Re-Assessment, David J. Burdige

OES Faculty Publications

Calculations based on recent observations indicate that approximately one third of the organic matter presently being buried in marine sediments may be of terrestrial origin, with the majority of this terrestrial organic matter (TOM) burial occurring in muddy, deltaic sediments. These calculations further suggest that the remineralization of terrestrial organic matter in the oceans is also much less efficient than that of marine organic matter. These two underappreciated observations have important implications in terms of our understanding of the controls on the global carbon cycle. From a paleoceanographic perspective, the results presented here also suggest that changes in TOM burial …

High Dispersal In A Frog Species Suggest That It Is Vulnerable To Habitat Fragmentation, W. Chris Funk, Allison E. Greene, Paul Stephen Corn, Fred W. Allendorf

United States Geological Survey: Staff Publications

Global losses of amphibian populations are a major conservation concern and have generated substantial debate over their causes. Habitat fragmentation is considered one important cause of amphibian decline. However, if fragmentation is to be invoked as a mechanism of amphibian decline, it must first be established that dispersal is prevalent among contiguous amphibian populations using formal movement estimators. In contrast, if dispersal is naturally low in amphibians, fragmentation can be disregarded as a cause of amphibian declines and conservation efforts can be focused elsewhere. We examined dispersal rates in Columbia spotted frogs (Rana luteiventris) using capture– recapture analysis …

Population Structure Of Columbia Spotted Frogs (Rana Luteiventris) Is Strongly Affected By The Landscape, W. Chris Funk, Michael S. Blouin, Paul Stephen Corn, Bryce A. Maxell, David S. Pilliod, Stephen Amish, Fred W. Allendorf

United States Geological Survey: Staff Publications

Landscape features such as mountains, rivers, and ecological gradients may strongly affect patterns of dispersal and gene flow among populations and thereby shape population dynamics and evolutionary trajectories. The landscape may have a particularly strong effect on patterns of dispersal and gene flow in amphibians because amphibians are thought to have poor dispersal abilities. We examined genetic variation at six microsatellite loci in Columbia spotted frogs (Rana luteiventris) from 28 breeding ponds in western Montana and Idaho, USA, in order to investigate the effects of landscape structure on patterns of gene flow. We were particularly interested in addressing …

Agenda: Introduction To The Legal Foundation Of Federal Land Management, University Of Colorado Boulder. Natural Resources Law Center

Introduction to the Legal Foundation of Federal Land Management (December 1-3)

Materials prepared for the course held at the National Center for Atmospheric Research in Boulder, Colorado on December 1-3, 2004

Course instructors: Charles Wilkinson; Sarah Krakoff; Kathryn Mutz; Ann Morgan; Maggie Fox

Contents:

Introduction -- Agenda -- Summaries of laws -- Case studies. Travel management; Oil and gas development; Timber/fuels reduction -- How to influence agency decision makers -- Natural resource related legal and policy resources for the non-legal professional

Introduction To The Legal Foundation Of Federal Land Management, University Of Colorado Boulder. Natural Resources Law Center

Introduction to the Legal Foundation of Federal Land Management (December 1-3)

1 v. (various pagings) : ill., maps ; 28 cm

Materials prepared for the course held at the National Center for Atmospheric Research in Boulder, Colorado on December 1-3, 2004

Course instructors: Charles Wilkinson; Sarah Krakoff; Kathryn Mutz; Ann Morgan; Maggie Fox

Contents:

Introduction -- Agenda -- Summaries of laws -- Case studies. Travel management; Oil and gas development; Timber/fuels reduction -- How to influence agency decision makers -- Natural resource related legal and policy resources for the non-legal professional

Orographic Midlatitude Cyclone Modification: An Appalachian Study, Andrew Douglas Augustine

All-Inclusive List of Electronic Theses and Dissertations

Forecasting weather within cyclonic systems is increasingly complicated and problematic when the cyclone is modified as it passes over a mountain range. Although much study has been devoted to orographic effects, the degree of influence exerted upon midlatitude cyclones by the undersized Appalachian Mountains has not been fully established. The fundamental goal of this research was to investigate the relationships between the orography of the Appalachian region and three inherent properties exhibited by midlatitude cyclones traversing the region including intensity, movement speed, and heading. The methodology used in this study integrates GIS within a climatological analysis. Initially, a midlatitude surface …

A Watershed-Based Classification System For Lakes In Agriculturally-Dominated Ecosystems: A Case Study Of Nebraska Reservoirs, Henry N. N. Bulley

Department of Geography: Dissertations, Theses, and Student Research

In recent decades substantial progress has been made in improving the quality of surface waters in the United States (Hawkins et al., 2000; EPA, 2000; EPA, 2001); nevertheless, much work remains to be done in assessing the state of impairment of lake waters. Impairment implies that the existing water quality of a lake, as measured by selected criteria (e.g., nitrogen, phosphorus, chlorophyll-a, Secchi depth), exceeds a threshold value or standard that presumably reflects optimal attainable lake water quality conditions (or "reference" conditions) (Hughes, 1995; EPA, 2000; EPA, 2001). Such impaired waters are not suitable for designated uses such as drinking, …

A 700 Year Record Of Southern Hemisphere Extratropical Climate Variability, Paul A. Mayewski, Kirk A. Maasch, James W.C. White, Eric J. Steig, E A. Meyerson, Ian D. Goodwin, Vin Morgan, Tas D. Van Ommen, Mark Aj Curran, Joseph M. Souney Jr, K Kreutz

All Materials

Annually dated ice cores from West and East Antarctica provide proxies for past changes in atmospheric circulation over Antarctica and portions of the Southern Ocean, temperature in coastal West and East Antarctica, and the frequency of South Polar penetration of El Niño events. During the period AD 1700–1850, atmospheric circulation over the Antarctic and at least portions of the Southern Hemisphere underwent a mode switch departing from the out-of-phase alternation of multi-decadal long phases of EOF1 and EOF2 modes of the 850 hPa field over the Southern Hemisphere (as defined in the recent record by Thompson and Wallace, 2000; Thompson …

Groundwater Trends In The North Stirling Pallinup Sub-Region, Ruhi Ferdowsian, Lisa Crossing

Natural resources published reports

The South Coast Regional Initiative Planning Team (SCRIPT) has divided the South Coast region of Western Australia into six sub-regions. This publication describes the groundwater trends, risk of shallow watertables, and technical feasibility of salinity management in the agricultural district of the North Stirling Pallinup sub-region.

This sub-region encompasses the Stirling Range National Park, the North Stirling Basin to the north-east of the Park, and the middle and upper catchments of the Pallinup River. Almost 90% (500,000 ha) of the sub-region's alienated land has been cleared for agriculture, and salinity has been identified as an important issue.

Soil-landscape zones are …

Groundwater Trends In The Fitzgerald Biosphere Sub-Region, Adam Lillicrap

Natural resources published reports

The South Coast Regional Initiative Planning Team (SCRIPT) has divided the South Coast region into six sub-regions. The Fitzgerald Biosphere sub-region is located in the centre of the South Coast region of Western Australia (Figure 1). It is bounded by the Pallinup River to the east, Jerdacuttup River to the west, and includes the catchments of the Gairdner, Fitzgerald and Phillips Rivers. The sub-region encompasses the Fitzgerald Biosphere Reserve and just over half (730,000 ha) has been cleared for agriculture.

This publication describes the groundwater trends, risk of shallow watertables, and technical feasibility of salinity management in the soil landscape …

Waldo Lake Research In 2003, Mark D. Sytsma, John Rueter, Richard Petersen, Roy Koch, Scott A. Wells, Rich Miller, Laura Johnson, Robert Leslie Annear

Civil and Environmental Engineering Faculty Publications and Presentations

This report summarizes the first year of an effort to develop a more complete understanding of the physical, chemical, and biological characteristics that drive the ecological processes of Waldo Lake. Modern limnology recognizes the importance of watershed processes as well as in- lake processes in lake ecosystem functioning. Therefore, the approach included consideration of watershed hydrology and forcing functions that determine hydrodynamics of the system as well physical and chemical factors that may be important in regulating primary production in the lake. Data collected since 1998 was summarized and bathymetry of the basin was mapped using state-of-the-art digital depth sounding …

Relating Water And Otolith Chemistry In Chesapeake Bay, And Their Potential To Identify Essential Seagrass Habitats For Juveniles Of An Estuarine-Dependent Fish, Spotted Seatrout (Cynoscion Nebulosus), Emmanis Dorval

Biological Sciences Theses & Dissertations

A quantitative understanding of habitat use of estuarine-dependent fishes is critical to the conservation of their most essential habitats. Because recruitment and fitness may be influenced by the quality of juvenile habitats, developing methods to quantify habitat-specific survivorship is pivotal to such understanding. An initial step to quantify survivorship is to validate the habitat-specific natural tags contained in otoliths. To this aim I investigated the variability in the chemistry of surface waters and otoliths of juvenile spotted seatrout, Cynoscion nebulosus, in five seagrass habitats of Chesapeake Bay, namely: Potomac, Rappahannock, York, Island, and Eastern Shore. I measured Mg, Ca, …

Yucca Mountain Climate Technical Support Representative, Saxon E. Sharpe, Dick Reinhardt, Eric Smistad, Don Baepler, Amy J. Smiecinski

Publications (YM)

The principal investigator (PI), Saxon Sharpe, for Task ORD-FY04-012, DOE Cooperative Agreement DE-FC28-04RW12232, will serve as Yucca Mountain Climate Technical Support Representative for the Department of Energy (DOE) in a series of activities related to past, present, and future climate for the Yucca Mountain Project (YMP) climate program.

As stated in the Viability Assessment of a Repository at Yucca Mountain: “Climate and its changes over time directly affect system performance at Yucca Mountain.” Currently, information from climate studies is used in models that support the Total System Performance Assessment and Licensing Application. It is a model component of all key …

Ogallala Aquifer, Robert F. Diffendal Jr.

School of Natural Resources: Faculty Publications

The Ogallala Aquifer, or High Plains Aquifer, is a porous body of complex sediments and sedimentary rock formations that conducts groundwater and yields significant quantities of water to wells and springs. The principal sediments and rocks of the aquifer range in age from 33 million years old to sediments being deposited today, but the majority is less than 12 million-years old. Much of the aquifer is composed of the Ogallala Group or Formation. The dominant sediments in the Ogallala and the other hydrogeologic units in the aquifer are riverand wind-deposited sands. The aquifer underlies about 174,000 square miles of the …

Light & Dark: The Hidden Wonders Of Buck Creek, Lee J. Florea

Earth, Environmental, and Atmospheric Sciences Faculty Publications

As early morning mists rise from the banks of its supple waters, beams of light penetrate the Buck Creek valley illuminating its beauty. While light illuminates most of the land, there are secret places, nestled within the forest where darkness reigns supreme. Places beyond the touch of the sun, beyond the influence of seasons. Here time is measured not in cycles of light but by the flow of water and fall of rock. These are the caves, conduits for water past and present. Nestled in the hills of south-central Kentucky the caves along Buck Creek provide the lifeblood for a …

An Analysis Of Simulated Long-Term Soil Moisture Data For Three Land Uses Under Contrasting Hydroclimatic Conditions In The Northern Great Plains, Rezaul Mamood, Kenneth G. Hubbard

High Plains Regional Climate Center: Staff Publications

Soil moisture (SM) plays an important role in land surface and atmosphere interactions. It modifies energy balance near the surface and the rate of water cycling between land and atmosphere. The lack of observed SM data prohibits understanding of SM variations at climate scales under varying land uses. However, with simulation models it is possible to develop a long-term SM dataset and study these issues. In this paper a water balance model is used to provide a quantitative assessment of SM climatologies for three land uses, namely, irrigated corn, rain-fed corn, and grass, grown under three hydroclimatic regimes in Nebraska. …

An Agricultural Drought Risk-Assessment Model For Corn And Soybeans, Hong Wu, Kenneth G. Hubbard, Donald A. Wilhite

National Drought Mitigation Center: Faculty Publications

Copyright © 2004 Royal Meteorological Society. Published by Wiley InterScience. Used by permis-sion.

Drought Monitoring Using Data Mining Techniques: A Case Study For Nebraska, Usa, Tsegaye Tadesse, Donald A. Wilhite, Sherri K. Harms, Michael J. Hayes, Steve Goddard

National Drought Mitigation Center: Faculty Publications

Drought has an impact on many aspects of society. To help decision makers reduce the impacts of drought, it is important to improve our understanding of the characteristics and relationships of atmospheric and oceanic parameters that cause drought. In this study, the use of data mining techniques is introduced to find associations between drought and several oceanic and climatic indices that could help users in making knowledgeable decisions about drought responses before the drought actually occurs. Data mining techniques enable users to search for hidden patterns and find association rules for target data sets such as drought episodes. These techniques …

Grassland Vegetation And Bird Communities In The Southern Great Plains Of North America, Robert N. Chapman, David M. Engle, Ronald E. Masters, David M. Leslie Jr.

United States Geological Survey: Staff Publications

Structure and composition of vegetation and abundance of breeding birds in grasslands seeded to Old World bluestem (Bothriochloa ischmaeum) were compared to native mixed prairie in the southern Great Plains of North America. Abundance of birds was determined using fixed-radius point counts. Detrended correspondence analysis was used to compare plant community composition and canonical correspondence analysis was used to examine the relationships between plant species composition and vegetation structure with the bird community. Plant species composition differed distinctly between seeded grassland and native mixed prairie, but the differences were not reflected in habitat structure, bird community composition, or …