Data Science Commons^™

Aspect-Based Sentiment Analysis Of Movie Reviews, Samuel Onalaja, Eric Romero, Bosang Yun

SMU Data Science Review

This study investigates a comparison of classification models used to determine aspect based separated text sentiment and predict binary sentiments of movie reviews with genre and aspect specific driving factors. To gain a broader classification analysis, five machine and deep learning algorithms were compared: Logistic Regression (LR), Naive Bayes (NB), Support Vector Machine (SVM), and Recurrent Neural Network Long-Short-Term Memory (RNN LSTM). The various movie aspects that are utilized to separate the sentences are determined through aggregating aspect words from lexicon-base, supervised and unsupervised learning. The driving factors are randomly assigned to various movie aspects and their impact tied to …

Clinical Diagnosis Support With Convolutional Neural Network By Transfer Learning, Spencer Fogleman, Jeremy Otsap, Sangrae Cho

SMU Data Science Review

Breast cancer is prevalent among women in the United States. Breast cancer screening is standard but requires a radiologist to review screening images to make a diagnosis. Diagnosis through the traditional screening method of mammography currently has an accuracy of about 78% for women of all ages and demographics. A more recent and precise technique called Digital Breast Tomosynthesis (DBT) has shown to be more promising but is less well studied. A machine learning model trained on DBT images has the potential to increase the success of identifying breast cancer and reduce the time it takes to diagnose a patient, …

Intelligent Resource Prediction For Hpc And Scientific Workflows, Benjamin Shealy

All Dissertations

Scientific workflows and high-performance computing (HPC) platforms are critically important to modern scientific research. In order to perform scientific experiments at scale, domain scientists must have knowledge and expertise in software and hardware systems that are highly complex and rapidly evolving. While computational expertise will be essential for domain scientists going forward, any tools or practices that reduce this burden for domain scientists will greatly increase the rate of scientific discoveries. One challenge that exists for domain scientists today is knowing the resource usage patterns of an application for the purpose of resource provisioning. A tool that accurately estimates these …

A Comparative Study Of Machine Learning-Based Approach For Network Traffic Classification, Kien Trang, An Hoang Nguyen

Knowledge Engineering and Data Science

Internet usage has increased rapidly and become an essential part of human life, corresponding to the rapid development of network infrastructure in recent years. Thus, protecting users’ confidential information when joining the global network becomes one of the most significant considerations. Even though multiple encryption algorithms and techniques have been applied in different parties, including internet providers, and web hosting, this situation also allows the hacker to attack the network system anonymously. Therefore, the significance of classifying network data streams to improve network system quality and security is attracting increasing study interests. This work introduces a machine learning-based approach to …

Comparing Machine Learning Techniques With State-Of-The-Art Parametric Prediction Models For Predicting Soybean Traits, Susweta Ray

Department of Statistics: Dissertations, Theses, and Student Research

Soybean is a significant source of protein and oil, and also widely used as animal feed. Thus, developing lines that are superior in terms of yield, protein and oil content is important to feed the ever-growing population. As opposed to the high-cost phenotyping, genotyping is both cost and time efficient for breeders while evaluating new lines in different environments (location-year combinations) can be costly. Several Genomic prediction (GP) methods have been developed to use the marker and environment data effectively to predict the yield or other relevant phenotypic traits of crops. Our study compares a conventional GP method (GBLUP), a …

Determining States Of Movement In Humans Using Minimally Processed Eeg Signals And Various Classification Methods, Maurice Barnett

All Theses

Electroencephalography (EEG) is a non-invasive technique used in both clinical and research settings to record neuronal signaling in the brain. The location of an EEG signal as well as the frequencies at which its neuronal constituents fire correlate with behavioral tasks, including discrete states of motor activity. Due to the number of channels and fine temporal resolution of EEG, a dense, high-dimensional dataset is collected. Transcranial direct current stimulation (tDCS) is a treatment that has been suggested to improve motor functions of Parkinson’s disease and chronic stroke patients when stimulation occurs during a motor task. tDCS is commonly administered without …

Deep Fakes: The Algorithms That Create And Detect Them And The National Security Risks They Pose, Nick Dunard

James Madison Undergraduate Research Journal (JMURJ)

The dissemination of deep fakes for nefarious purposes poses significant national security risks to the United States, requiring an urgent development of technologies to detect their use and strategies to mitigate their effects. Deep fakes are images and videos created by or with the assistance of AI algorithms in which a person’s likeness, actions, or words have been replaced by someone else’s to deceive an audience. Often created with the help of generative adversarial networks, deep fakes can be used to blackmail, harass, exploit, and intimidate individuals and businesses; in large-scale disinformation campaigns, they can incite political tensions around the …

Enhancing Microbiome Host Disease Prediction With Variational Autoencoders, Celeste Manughian-Peter

Computational and Data Sciences (MS) Theses

Advancements in genetic sequencing methods for microbiomes in recent decades have permitted the collection of taxonomic and functional profiles of microbial communities, accelerating the discovery of the functional aspects of the microbiome and generating an increased interest among clinicians in applying these techniques with patients. This advancement has coincided with software and hardware improvements in the field of machine learning and deep learning. Combined, these advancements implicate further potential for progress in disease diagnosis and treatment in humans. The ability to classify a human microbiome profile into a disease category, and additionally identify the differentiating factors within the profile between …

Applying Deep Learning To The Ice Cream Vendor Problem: An Extension Of The Newsvendor Problem, Gaffar Solihu

Electronic Theses and Dissertations

The Newsvendor problem is a classical supply chain problem used to develop strategies for inventory optimization. The goal of the newsvendor problem is to predict the optimal order quantity of a product to meet an uncertain demand in the future, given that the demand distribution itself is known. The Ice Cream Vendor Problem extends the classical newsvendor problem to an uncertain demand with unknown distribution, albeit a distribution that is known to depend on exogenous features. The goal is thus to estimate the order quantity that minimizes the total cost when demand does not follow any known statistical distribution. The …

Performance Of Openbci Eeg Binary Intent Classification With Laryngeal Imagery, Nathan George, Samuel Kuhn

Regis University Faculty Publications (comprehensive list)

One of the greatest goals of neuroscience in recent decades has been to rehabilitate individuals who no longer have a functional relationship between their mind and their body. Although neuroscience has produced technologies which allow the brains of paralyzed patients to accomplish tasks such as spell words or control a motorized wheelchair, these technologies utilize parts of the brain which may not be optimal for simultaneous use. For example, if you needed to look at flashing lights to spell words for communication, it would be difficult to simultaneously look at where you are moving. To improve upon this issue, this …

Privacy-Preserving Cloud-Assisted Data Analytics, Wei Bao

Graduate Theses and Dissertations

Nowadays industries are collecting a massive and exponentially growing amount of data that can be utilized to extract useful insights for improving various aspects of our life. Data analytics (e.g., via the use of machine learning) has been extensively applied to make important decisions in various real world applications. However, it is challenging for resource-limited clients to analyze their data in an efficient way when its scale is large. Additionally, the data resources are increasingly distributed among different owners. Nonetheless, users' data may contain private information that needs to be protected.

Cloud computing has become more and more popular in …

Exploring The Long Tail, Joseph H. Hajjar

Dartmouth College Undergraduate Theses

The migration of datasets online has created a near-infinite inventory for big name retailers such as Amazon and Netflix, giving rise to recommendation systems to assist users in navigating the massive catalog. This has also allowed for the possibility of retailers storing much less popular, uncommon items which would not appear in a more traditional brick-and-mortar setting due to the cost of storage. Nevertheless, previous work has highlighted the profit potential which lies in the so-called "long tail'' of niche, unpopular items. Unfortunately, due to the limited amount of data in this subset of the inventory, recommendation systems often struggle …

Exploring The Use Of Social Media To Infer Relationships Between Demographics, Psychographics And Vaccine Hesitancy, Abhimanyu Kapur

Computer Science Senior Theses

The growing popularity of social media as a platform to obtain information and share one's opinions on various topics makes it a rich source of information for research. In this study, we aimed to develop a framework to infer relationships between demographic and psychographic characteristics of a user and their opinion on a specific narrative - in this case, their stance on taking the COVID-19 vaccine. Twitter was the chosen platform due to the large USA user base and easily available data. Demographic traits included Race, Age, Gender, and Human-vs-Organization Status. Psychographic traits included the Big Five personality traits (Conscientiousness, …

Per-Pixel Cloud Cover Classification Of Multispectral Landsat-8 Data, Salome E. Carrasco, Torrey J. Wagner, Brent T. Langhals

Faculty Publications

Random forest and neural network algorithms are applied to identify cloud cover using 10 of the wavelength bands available in Landsat 8 imagery. The methods classify each pixel into 4 different classes: clear, cloud shadow, light cloud, or cloud. The first method is based on a fully connected neural network with ten input neurons, two hidden layers of 8 and 10 neurons respectively, and a single-neuron output for each class. This type of model is considered with and without L2 regularization applied to the kernel weighting. The final model type is a random forest classifier created from an ensemble of …

Stationary Probability Distributions Of Stochastic Gradient Descent And The Success And Failure Of The Diffusion Approximation, William Joseph Mccann

Theses

In this thesis, Stochastic Gradient Descent (SGD), an optimization method originally popular due to its computational efficiency, is analyzed using Markov chain methods. We compute both numerically, and in some cases analytically, the stationary probability distributions (invariant measures) for the SGD Markov operator over all step sizes or learning rates. The stationary probability distributions provide insight into how the long-time behavior of SGD samples the objective function minimum.

A key focus of this thesis is to provide a systematic study in one dimension comparing the exact SGD stationary distributions to the Fokker-Planck diffusion approximation equations —which are commonly used in …

Machine Learning Methods For Depression Detection Using Smri And Rs-Fmri Images, Marzieh Sadat Mousavian

LSU Doctoral Dissertations

Major Depression Disorder (MDD) is a common disease throughout the world that negatively influences people’s lives. Early diagnosis of MDD is beneficial, so detecting practical biomarkers would aid clinicians in the diagnosis of MDD. Having an automated method to find biomarkers for MDD is helpful even though it is difficult. The main aim of this research is to generate a method for detecting discriminative features for MDD diagnosis based on Magnetic Resonance Imaging (MRI) data.

In this research, representational similarity analysis provides a framework to compare distributed patterns and obtain the similarity/dissimilarity of brain regions. Regions are obtained by either …

Using Machine Learning Methods To Predict The Movement Trajectories Of The Louisiana Black Bear, Daniel Clark, David Shaw, Armando Vela, Shane Weinstock, John Santerre, Joseph D. Clark

SMU Data Science Review

In 1992, the Louisiana black bear (Ursus americanus luteolus) was placed on the U.S. Endangered Species List. This was due to bear populations in Louisiana being small and isolated enough where their populations couldn’t intersect with other populations to grow. Interchange of individuals between subpopulations of bears in Louisiana is critical to maintain genetic diversity and avoid inbreeding effects. Utilizing GPS (Global Positioning System) data gathered from 31 radio-collared bears from 2010 through 2012, this research will investigate how bears traverse the landscape, which has implications for gene exchange. This paper will leverage machine learning tools to improve upon existing …

Machine Learning In The Health Industry: Predicting Congestive Heart Failure And Impactors, Alexandra Norman, James Harding, Daria Zhukova

SMU Data Science Review

Cardiovascular diseases, Congestive Heart Failure in particular, are a leading cause of deaths worldwide. Congestive Heart Failure has high mortality and morbidity rates. The key to decreasing the morbidity and mortality rates associated with Congestive Heart Failure is determining a method to detect high-risk individuals prior to the development of this often-fatal disease. Providing high-risk individuals with advanced knowledge of risk factors that could potentially lead to Congestive Heart Failure, enhances the likelihood of preventing the disease through implementation of lifestyle changes for healthy living. When dealing with healthcare and patient data, there are restrictions that led to difficulties accessing …

Fine-Grained Sentiment Analysis For Customer Review, Bing Han, Meng Han, Jing (Selena) He

Master of Science in Computer Science Theses

Natural Language Processing (NLP) is one of the most attractive technologies in many applications in real-life. Sentiment analysis, which has devoted to know others' think or feel about an experience or an item and hence take an action, is one of the most developed area in both academia and industry. Among sentiment analysis, fine-grained aspect sentiment analysis attempts to analyze emotional attitude categorized into different aspects or features of an(a) experience/service/product. Although aspect level sentiment analysis could provide more useful information, the proposed models' performance were relative poor compared with document-level or sentence-level sentiment analysis due to the lack of …

Contract Information Extraction Using Machine Learning, Zachary E. Butcher

Theses and Dissertations

The Air Force Sustainment Center assisted by the Data Analytics Resource Team and the Defense Logistics Agency collected four million contracts onto one of the Air Force Research Laboratory’s high power computers. This thesis focuses on the effort to determine if parts are available through those contracts. Some information is extracted using machine learning in combination with natural language processing. Where machine learning methods are unsuccessful or inappropriate, text mining techniques, such as pattern recognition and rules, are used. Upon completion, the information is combined into a Gantt chart for quick evaluation. Only 21% of the contracts have their information …

Creating A Machine Learning Model For The Prediction Of Refugee Flows, Esther Mead

Theses and Dissertations

The world-wide refugee problem has a long history, but continues to this day, and will unfortunately continue into the foreseeable future. Efforts to adequately anticipate, mitigate and prepare for refugee flows, however, are still lacking. There are many potential causes for refugee flows, but the published research has primarily focused on identifying ways to integrate already existing refugees into the various communities wherein they ultimately reside after having fled their home countries, rather than on the idea of figuring out ways to prevent the situations that initially caused them to flee. The model proposed in this dissertation uses a set …

Developing A New Analytical Model For Combatting Crises: A Comprehensive Review, Seth Spire

Research Awards

As the world emerges from the COVID-19 pandemic, it is critical to reflect on the lessons learned and prepare for potential future health crises. While data analytics and artificial intelligence (AI) played a pivotal role in managing the pandemic, there is much room for improvement and further use. This study examines the current state of data science tools employed during COVID-19, evaluating their advantages, limitations, and challenges in their broader implementation. We also review literature on future directions for AI in healthcare. Our findings highlight significant challenges, including difficulties in accessing usable data and common distrust of AI models for …

Machine Learning And Bioinformatic Insights Into Key Enzymes For A Bio-Based Circular Economy, Japheth E. Gado

Theses and Dissertations--Chemical and Materials Engineering

The world is presently faced with a sustainability crisis; it is becoming increasingly difficult to meet the energy and material needs of a growing global population without depleting and polluting our planet. Greenhouse gases released from the continuous combustion of fossil fuels engender accelerated climate change, and plastic waste accumulates in the environment. There is need for a circular economy, where energy and materials are renewably derived from waste items, rather than by consuming limited resources. Deconstruction of the recalcitrant linkages in natural and synthetic polymers is crucial for a circular economy, as deconstructed monomers can be used to manufacture …

Convolutional Audio Source Separation Applied To Drum Signal Separation, Marius Orehovschi

Honors Theses

This study examined the task of drum signal separation from full music mixes via both classical methods (Independent Component Analysis) and a combination of Time-Frequency Binary Masking and Convolutional Neural Networks. The results indicate that classical methods relying on predefined computations do not achieve any meaningful results, while convolutional neural networks can achieve imperfect but musically useful results. Furthermore, neural network performance can be improved by data augmentation via transposition – a technique that can only be applied in the context of drum signal separation.

Information Architecture For A Chemical Modeling Knowledge Graph, Adam R. Luxon

Theses and Dissertations

Machine learning models for chemical property predictions are high dimension design challenges spanning multiple disciplines. Free and open-source software libraries have streamlined the model implementation process, but the design complexity remains. In order better navigate and understand the machine learning design space, model information needs to be organized and contextualized. In this work, instances of chemical property models and their associated parameters were stored in a Neo4j property graph database. Machine learning model instances were created with permutations of dataset, learning algorithm, molecular featurization, data scaling, data splitting, hyperparameters, and hyperparameter optimization techniques. The resulting graph contains over 83,000 nodes …

Reliable And Interpretable Machine Learning For Modeling Physical And Cyber Systems, Daniel L. Marino Lizarazo

Theses and Dissertations

Over the past decade, Machine Learning (ML) research has predominantly focused on building extremely complex models in order to improve predictive performance. The idea was that performance can be improved by adding complexity to the models. This approach proved to be successful in creating models that can approximate highly complex relationships while taking advantage of large datasets. However, this approach led to extremely complex black-box models that lack reliability and are difficult to interpret. By lack of reliability, we specifically refer to the lack of consistent (unpredictable) behavior in situations outside the training data. Lack of interpretability refers to the …

Assessing And Forecasting Chlorophyll Abundances In Minnesota Lake Using Remote Sensing And Statistical Approaches, Ben Von Korff

All Graduate Theses, Dissertations, and Other Capstone Projects

Harmful algae blooms (HABs) can negatively impact water quality, lake aesthetics, and can harm human and animal health. However, monitoring for HABs is rare in Minnesota. Detecting blooms which can vary spatially and may only be present briefly is challenging, so expanding monitoring in Minnesota would require the use of new and cost efficient technologies. Unmanned aerial vehicles (UAVs) were used for bloom mapping using RGB and near-infrared imagery. Real time monitoring was conducted in Bass Lake, in Faribault County, MN using trail cameras. Time series forecasting was conducted with high frequency chlorophyll-a data from a water quality sonde. Normalized …

Revisiting Absolute Pose Regression, Hunter Blanton

Theses and Dissertations--Computer Science

Images provide direct evidence for the position and orientation of the camera in space, known as camera pose. Traditionally, the problem of estimating the camera pose requires reference data for determining image correspondence and leveraging geometric relationships between features in the image. Recent advances in deep learning have led to a new class of methods that regress the pose directly from a single image.

This thesis proposes methods for absolute camera pose regression. Absolute pose regression estimates the pose of a camera from a single image as the output of a fixed computation pipeline. These methods have many practical benefits …

Searching Harder, Localizing Better, Classifying Faster: Optimizing Fast Radio Burst Detection And Analysis, Kshitij Aggarwal

Graduate Theses, Dissertations, and Problem Reports (ETD)

Fast Radio Bursts (or FRBs) are millisecond-duration transients of extragalactic origin. They exhibit dispersion caused by propagation through an ionized medium, and quantified by Dispersion Measure (DM). Around 800 FRBs (24 repeaters) have been discovered; so far, 24 FRBs have been confidently associated with a host galaxy. In this thesis, we discuss multiple new FRB search and analysis techniques and the corresponding tools that enable us to search for FRBs harder, localize them better, and classify candidates faster.

We discuss five open-source software suites that can be used in FRB analysis. These suites are used to distinguish between FRBs and …

Inference Of Surface Velocities From Oblique Time Lapse Photos And Terrestrial Based Lidar At The Helheim Glacier, Franklyn T. Dunbar Ii

Graduate Student Theses, Dissertations, & Professional Papers

Using time dependent observations derived from terrestrial LiDAR and oblique
time-lapse imagery, we demonstrate that a Bayesian approach to glacial motion es-
timation provides a concise way to incorporate multiple data products into a single
motion estimation procedure effectively producing surface velocity estimates with
an associated uncertainty. This approach brings both improved computational effi-
ciency, and greater scalability across observational time-frames when compared to
existing methods. To gauge efficacy, we apply these methods to a set of observa-
tions from the Helheim Glacier, a critical actor in contemporary mass loss trends
observed in the Greenland Ice Sheet. We find that …