Data Science Commons^™

Beyond News Values On Twitter: Predicting Factors That Drive User Engagement In News, Zhiyan Zhong

Dartmouth College Master’s Theses

When deciding on what news stories to cover, traditional journalism determines news values by following several elements of newsworthiness, such as impact, timeliness, and prominence. However, these guidelines do not always seem to correspond with the success of content on social media. As people are increasingly turning to social media for news, our research aims to understand and predict factors that drive user engagement for news on social media. In this study, we analyze news content published on Twitter, and examine a diverse set of characteristics like metrics retrieved from the Twitter API and semantics by natural language processing, including …

Application Of An Ontology For Model Cards To Generate Computable Artifacts For Linking Machine Learning Information From Biomedical Research, Muhammad Tuan Amith, Licong Cui, Kirk Roberts, Cui Tao

Faculty, Staff and Student Publications

Model card reports provide a transparent description of machine learning models which includes information about their evaluation, limitations, intended use, etc. Federal health agencies have expressed an interest in model cards report for research studies using machine-learning based AI. Previously, we have developed an ontology model for model card reports to structure and formalize these reports. In this paper, we demonstrate a Java-based library (OWL API, FaCT++) that leverages our ontology to publish computable model card reports. We discuss future directions and other use cases that highlight applicability and feasibility of ontology-driven systems to support FAIR challenges.

Convolutional Neural Network For Biomarker Discovery For Triple Negative Breast Cancer With Rna Sequencing Data, Xiangning Chen, Justin M Balko, Fei Ling, Yabin Jin, Anneliese Gonzalez, Zhongming Zhao, Jingchun Chen

Faculty, Staff and Student Publications

Triple negative breast cancers (TNBCs) are tumors with a poor treatment response and prognosis. In this study, we propose a new approach, candidate extraction from convolutional neural network (CNN) elements (CECE), for discovery of biomarkers for TNBCs. We used the GSE96058 and GSE81538 datasets to build a CNN model to classify TNBCs and non-TNBCs and used the model to make TNBC predictions for two additional datasets, the cancer genome atlas (TCGA) breast cancer RNA sequencing data and the data from Fudan University Shanghai Cancer Center (FUSCC). Using correctly predicted TNBCs from the GSE96058 and TCGA datasets, we calculated saliency maps …

High-Dimensional Variable Selection Via Knockoffs Using Gradient Boosting, Amr Essam Mohamed

Dissertations

As data continue to grow rapidly in size and complexity, efficient and effective statistical methods are needed to detect the important variables/features. Variable selection is one of the most crucial problems in statistical applications. This problem arises when one wants to model the relationship between the response and the predictors. The goal is to reduce the number of variables to a minimal set of explanatory variables that are truly associated with the response of interest to improve the model accuracy. Effectively choosing the true influential variables and controlling the False Discovery Rate (FDR) without sacrificing power has been a challenge …

Emotion Classification Of Indonesian Tweets Using Bidirectional Lstm, Aaron K. Glenn, Phillip M. Lacasse, Bruce A. Cox

Faculty Publications

Emotion classification can be a powerful tool to derive narratives from social media data. Traditional machine learning models that perform emotion classification on Indonesian Twitter data exist but rely on closed-source features. Recurrent neural networks can meet or exceed the performance of state-of-the-art traditional machine learning techniques using exclusively open-source data and models. Specifically, these results show that recurrent neural network variants can produce more than an 8% gain in accuracy in comparison with logistic regression and SVM techniques and a 15% gain over random forest when using FastText embeddings. This research found a statistical significance in the performance of …

A Bidirectional Deep Lstm Machine Learning Method For Flight Delay Modelling And Analysis, Desmond B. Bisandu, Irene Moulitsas

National Training Aircraft Symposium (NTAS)

Flight delays can be prevented by providing a reference point from an accurate prediction model because predicting flight delays is a problem with a specific space. Only a few algorithms consider predicted classes' mutual correlation during flight delay classification or prediction modelling tasks. None of these existing methods works for all scenarios. Therefore, the need to investigate the performance of more models in solving the problem of flight delay is vast and rapidly increasing. This paper presents the development and evaluation of LSTM and BiLSTM models by comparing them for a flight delay prediction. The LSTM does the feature extraction …

Visual Analytics And Modeling Of Materials Property Data, Diwas Bhattarai

LSU Doctoral Dissertations

Due to significant advancements in experimental and computational techniques, materials data are abundant. To facilitate data-driven research, it calls for a system for managing and sharing data and supporting a set of tools for effective data analysis and modeling. Generally, a given material property M can be considered as a multivariate data problem. The dimensions of M are the values of the property itself, the conditions (pressure P, temperature T, and multi-component composition X) that control the concerned property, and relevant metadata I (source, date).

Here we present a comprehensive database considering both experimental and computational sources …

Time Series Forecasting For Stock Market Prices, Albert Zhou

Senior Honors Projects

No abstract provided.

Detecting Overlapping Gene Regions Using The U-Net Attention Mechanism, Samuel Lemma

All Graduate Theses, Dissertations, and Other Capstone Projects

The current issue of locating, diagnosing, and treating cancer and other diseases linked to specific target genes necessitates the creation of a reliable system for precisely identifying target genes that are initially extracted from a human chromosome. Current methodologies often suffer from overlapping gene regions in the target gene that occurs during the analysis process, which can have a substantial impact on the accuracy of the results. Our recommended approach, which was the appropriate model to apply for this particular problem, is set to enhance the analytical process by utilizing neural networks' U-Net with an attention mechanism. We were able …

Unlocking User Identity: A Study On Mouse Dynamics In Dual Gaming Environments For Continuous Authentication, Marcho Setiawan Handoko

All Graduate Theses, Dissertations, and Other Capstone Projects

With the surge in information management technology reliance and the looming presence of cyber threats, user authentication has become paramount in computer security. Traditional static or one-time authentication has its limitations, prompting the emergence of continuous authentication as a frontline approach for enhanced security. Continuous authentication taps into behavior-based metrics for ongoing user identity validation, predominantly utilizing machine learning techniques to continually model user behaviors. This study elucidates the potential of mouse movement dynamics as a key metric for continuous authentication. By examining mouse movement patterns across two contrasting gaming scenarios - the high-intensity "Team Fortress" and the low-intensity strategic …

A Deep Bilstm Machine Learning Method For Flight Delay Prediction Classification, Desmond B. Bisandu, Irene Moulitsas

Journal of Aviation/Aerospace Education & Research

This paper proposes a classification approach for flight delays using Bidirectional Long Short-Term Memory (BiLSTM) and Long Short-Term Memory (LSTM) models. Flight delays are a major issue in the airline industry, causing inconvenience to passengers and financial losses to airlines. The BiLSTM and LSTM models, powerful deep learning techniques, have shown promising results in a classification task. In this study, we collected a dataset from the United States (US) Bureau of Transportation Statistics (BTS) of flight on-time performance information and used it to train and test the BiLSTM and LSTM models. We set three criteria for selecting highly important features …

Health Care Equity Through Intelligent Edge Computing And Augmented Reality/Virtual Reality: A Systematic Review, Vishal Lakshminarayanan, Aswathy Ravikumar, Harini Sriraman, Sujatha Alla, Vijay Kumar Chattu

Engineering Management & Systems Engineering Faculty Publications

Intellectual capital is a scarce resource in the healthcare industry. Making the most of this resource is the first step toward achieving a completely intelligent healthcare system. However, most existing centralized and deep learning-based systems are unable to adapt to the growing volume of global health records and face application issues. To balance the scarcity of healthcare resources, the emerging trend of IoMT (Internet of Medical Things) and edge computing will be very practical and cost-effective. A full examination of the transformational role of intelligent edge computing in the IoMT era to attain health care equity is offered in this …

Application Of Big Data Technology, Text Classification, And Azure Machine Learning For Financial Risk Management Using Data Science Methodology, Oluwaseyi A. Ijogun

College of Graduate Studies: Theses & Dissertations

Data science plays a crucial role in enabling organizations to optimize data-driven opportunities within financial risk management. It involves identifying, assessing, and mitigating risks, ultimately safeguarding investments, reducing uncertainty, ensuring regulatory compliance, enhancing decision-making, and fostering long-term sustainability. This thesis explores three facets of Data Science projects: enhancing customer understanding, fraud prevention, and predictive analysis, with the goal of improving existing tools and enabling more informed decision-making. The first project examined leveraged big data technologies, such as Hadoop and Spark, to enhance financial risk management by accurately predicting loan defaulters and their repayment likelihood. In the second project, we investigated …

The Basil Technique: Bias Adaptive Statistical Inference Learning Agents For Learning From Human Feedback, Jonathan Indigo Watson

Theses and Dissertations--Computer Science

We introduce a novel approach for learning behaviors using human-provided feedback that is subject to systematic bias. Our method, known as BASIL, models the feedback signal as a combination of a heuristic evaluation of an action's utility and a probabilistically-drawn bias value, characterized by unknown parameters. We present both the general framework for our technique and specific algorithms for biases drawn from a normal distribution. We evaluate our approach across various environments and tasks, comparing it to interactive and non-interactive machine learning methods, including deep learning techniques, using human trainers and a synthetic oracle with feedback distorted to varying degrees. …

Applications Of Transfer Learning From Malicious To Vulnerable Binaries, Sean Patrick Mcnulty

Graduate Student Theses, Dissertations, & Professional Papers

Malware detection and vulnerability detection are important cybersecurity tasks. Previous research has successfully applied a variety of machine learning methods to both. However, despite their potential synergies, previous research has yet to unite these two tasks. Given the recent success of transfer learning in many domains, such as language modeling and image recognition, this thesis investigated the use of transfer learning to improve vulnerability detection. Specifically, we pre-trained a series of models to detect malicious binaries and used the weights from those models to kickstart the detection of vulnerable binaries. In our study, we also investigated five different data representations …

Invasive Buckthorn Mapping: A Uav-Based Approach Utilizing Machine Learning, Gis, And Remote Sensing Techniques In The Upper Peninsula Of Michigan, Vikranth Madeppa

Dissertations, Master's Theses and Master's Reports

An Invasive species is a species that is alien or non-native to the ecosystem which causes harm to economic, environmental, or human health (E.O. 13112 of Feb 3, 1999). Invasive species have posed a serious threat to ecosystems across the globe. These invasive species have impacts on the biodiversity and productivity of invaded forests. Remotely sensed data is a valuable resource for understanding and addressing issues related to invasive species. This study presents a novel approach for mapping the distribution of two invasive plant species, Common and Glossy Buckthorn, using unmanned aerial vehicles (UAVs), machine learning algorithms, geographic information systems …

Transfer Learning Using Infrared And Optical Full Motion Video Data For Gender Classification, Alexander M. Glandon, Joe Zalameda, Khan M. Iftekharuddin, Gabor F. Fulop (Ed.), David Z. Ting (Ed.), Lucy L. Zheng (Ed.)

Electrical & Computer Engineering Faculty Publications

This work is a review and extension of our ongoing research in human recognition analysis using multimodality motion sensor data. We review our work on hand crafted feature engineering for motion capture skeleton (MoCap) data, from the Air Force Research Lab for human gender followed by depth scan based skeleton extraction using LIDAR data from the Army Night Vision Lab for person identification. We then build on these works to demonstrate a transfer learning sensor fusion approach for using the larger MoCap and smaller LIDAR data for gender classification.

Machine Learning Approach To Predict Tdcs-Induced Electric Current In The Human Brain, Chikako Olsen

Dissertations and Theses

Background: Transcranial direct current stimulation (tDCS) is a promising non-invasive method for treating neurological and psychiatric disorders and enhancing cognitive function. However, the underlying mechanisms of tDCS are not fully understood, and there is no ground truth for determining, non-invasively, where in the brain tDCS electrical currents flow. At the same time, effective neuronal engagement from tDCS requires accurate localization of the induced currents to specific brain target regions. Machine Learning (ML) has the potential to significantly improve the accuracy and precision of tDCS current prediction. This study aims to develop a novel approach using ML to predict the location …

Machine Learning Prediction Of Dod Personal Property Shipment Costs, Tiffany Tucker, Torrey J. Wagner, Paul Auclair, Brent T. Langhals

Faculty Publications

U.S. Department of Defense (DoD) personal property moves account for 15% of all domestic and international moves - accurate prediction of their cost could draw attention to outlier shipments and improve budget planning. In this work 136,140 shipments between 13 personal property shipment hubs from April 2022 through March 2023 with a total cost of $1.6B were analyzed. Shipment cost was predicted using recursive feature elimination on linear regression and XGBoost algorithms, as well as through neural network hyperparameter sweeps. Modeling was repeated after removing 28 features related to shipment hub location and branch of service to examine their influence …

Applying Data Science And Machine Learning To Understand Health Care Transition For Adolescents And Emerging Adults With Special Health Care Needs, Lisamarie Turk

Nursing ETDs

A problem of classification places adolescents and emerging adults with special health care needs among the most at risk for poor or life-threatening health outcomes. This preliminary proof-of-concept study was conducted to determine if phenotypes of health care transition (HCT) for this vulnerable population could be established. Such phenotypes could support development of future studies that require data classifications as input. Mining of electronic health record data and cluster analysis were implemented to identify phenotypes. Subsequently, a machine learning concept model was developed for predicting acute care and medical condition severity. Three clusters were identified and described (Cluster 1, n …

The Interaction Of Normalisation And Clustering In Sub-Domain Definition For Multi-Source Transfer Learning Based Time Series Anomaly Detection, Matthew Nicholson, Rahul Agrahari, Clare Conran, Haythem Assem, John D. Kelleher

Articles

This paper examines how data normalisation and clustering interact in the definition of sub-domains within multi-source transfer learning systems for time series anomaly detection. The paper introduces a distinction between (i) clustering as a primary/direct method for anomaly detection, and (ii) clustering as a method for identifying sub-domains within the source or target datasets. Reporting the results of three sets of experiments, we find that normalisation after feature extraction and before clustering results in the best performance for anomaly detection. Interestingly, we find that in the multi-source transfer learning scenario clustering on the target dataset and identifying subdomains in the …

Causal Inference In Psychology And Neuroscience: From Association To Causation, Dehua Liang

Computational and Data Sciences (PhD) Dissertations

In psychology and neuroscience, inferring causality in non-experimental studies is almost taboo, because data in these studies, e.g., survey data and resting-state neuroimaging data, are often contaminated by unmeasured confounders. Psychologists and neuroscientists are often cautious about their results, and reluctant to make false claims about causality in non-experimental studies. Therefore, they adopt less stringent statistical analysis techniques that can only infer associational relations. However, the ambiguity about causality in traditional statistical analysis creates much confusion in interpreting analytical results - some studies make implicit causal claims about their results using words such as “impacts”, “lead to” and “affects”. This …

Design Of Secure Communication Schemes To Provide Authentication And Integrity Among The Iot Devices, Vidya Rao Dr.

Technical Collection

The fast growth in Internet-of-Things (IoT) based applications, has increased the number of end-devices communicating over the Internet. The end devices are made with fewer resources and are low battery-powered. These resource-constrained devices are exposed to various security and privacy concerns over publicly available Internet communication. Thus, it becomes essential to provide lightweight security solutions to safeguard data and user privacy. Elliptic Curve Cryptography (ECC) can be used to generate the digital signature and also encrypt the data. The method can be evaluated on a real-time testbed deployed using Raspberry Pi3 devices and every message transmitted is subjected to ECC. …

The Interaction Of Different Primary Producers And Physical And Chemical Dynamics Of An Urban Shallow Lake, Majid Sahin

Dissertations, Theses, and Capstone Projects

An artificial urban shallow lake, Prospect Park Lake (PPL), is situated on a terminal moraine in Brooklyn New York, and supplied with municipal water treated with ortho-phosphates. The constant input of the phosphate nutrient is the primary source of eutrophication in the lake. The numerous pools along the water course houses various aquatic phototrophs, which influence the water quality and the state of the system, driving conditions into favoring the survival of their species. In the first half of the dissertation, the focus of the project is on analyzing how the different primary producers in different regions of PPL affect …

Immuno-Genomic Profiling Of Biopsy Specimens Predicts Neoadjuvant Chemotherapy Response In Esophageal Squamous Cell Carcinoma, Shota Sasagawa, Hiroaki Kato, Koji Nagaoka, Changbo Sun, Motohiro Imano, Takao Sato, Todd A Johnson, Masashi Fujita, Kazuhiro Maejima, Yuki Okawa, Kazuhiro Kakimi, Takushi Yasuda, Hidewaki Nakagawa

Faculty, Staff and Student Publications

Esophageal squamous cell carcinoma (ESCC) is one of the most aggressive cancers and is primarily treated with platinum-based neoadjuvant chemotherapy (NAC). Some ESCCs respond well to NAC. However, biomarkers to predict NAC sensitivity and their response mechanism in ESCC remain unclear. We perform whole-genome sequencing and RNA sequencing analysis of 141 ESCC biopsy specimens before NAC treatment to generate a machine-learning-based diagnostic model to predict NAC reactivity in ESCC and analyzed the association between immunogenomic features and NAC response. Neutrophil infiltration may play an important role in ESCC response to NAC. We also demonstrate that specific copy-number alterations and copy-number …

Data Collection And Machine Learning Methods For Automated Pedestrian Facility Detection And Mensuration, Joseph Bailey Luttrell Iv

Dissertations

Large-scale collection of pedestrian facility (crosswalks, sidewalks, etc.) presence data is vital to the success of efforts to improve pedestrian facility management, safety analysis, and road network planning. However, this kind of data is typically not available on a large scale due to the high labor and time costs that are the result of relying on manual data collection methods. Therefore, methods for automating this process using techniques such as machine learning are currently being explored by researchers. In our work, we mainly focus on machine learning methods for the detection of crosswalks and sidewalks from both aerial and street-view …

Solving The Challenges Of Concept Drift In Data Stream Classification., Hanqing Hu

Electronic Theses and Dissertations

The rise of network connected devices and applications leads to a significant increase in the volume of data that are continuously generated overtime time, called data streams. In real world applications, storing the entirety of a data stream for analyzing later is often not practical, due to the data stream’s potentially infinite volume. Data stream mining techniques and frameworks are therefore created to analyze streaming data as they arrive. However, compared to traditional data mining techniques, challenges unique to data stream mining also emerge, due to the high arrival rate of data streams and their dynamic nature. In this dissertation, …

Tempering The Adversary: An Exploration Into The Applications Of Game Theoretic Feature Selection And Regression, Stephen Mcgee

All Dissertations

Most modern machine learning algorithms tend to focus on an "average-case" approach, where every data point contributes the same amount of influence towards calculating the fit of a model. This "per-data point" error (or loss) is averaged together into an overall loss and typically minimized with an objective function. However, this can be insensitive to valuable outliers. Inspired by game theory, the goal of this work is to explore the utility of incorporating an optimally-playing adversary into feature selection and regression frameworks. The adversary assigns weights to the data elements so as to degrade the modeler's performance in an optimal …

Toward A Standard Formal Semantic Representation Of The Model Card Report, Muhammad Tuan Amith, Licong Cui, Degui Zhi, Kirk Roberts, Xiaoqian Jiang, Fang Li, Evan Yu, Cui Tao

Faculty, Staff and Student Publications

BACKGROUND: Model card reports aim to provide informative and transparent description of machine learning models to stakeholders. This report document is of interest to the National Institutes of Health's Bridge2AI initiative to address the FAIR challenges with artificial intelligence-based machine learning models for biomedical research. We present our early undertaking in developing an ontology for capturing the conceptual-level information embedded in model card reports.

RESULTS: Sourcing from existing ontologies and developing the core framework, we generated the Model Card Report Ontology. Our development efforts yielded an OWL2-based artifact that represents and formalizes model card report information. The current release of …

Automatic 3d Cranial Landmark Positioning Based Onsurface Curvature Feature Using Machine Learning, Putu Hendra Suputra, Anggraini Dwi Sensusiati, Myrtati Dyah Artaria, Gijsbertus Jacob Verkerke, Eko Mulyanto Yuniarno, I Ketut Eddy Purnama

Knowledge Engineering and Data Science

Cranial anthropometric reference points (landmarks) play an important role in craniofacial reconstruction and identification. Knowledge to detect the position of landmarks is critical. This work aims to locate landmarks automatically. Landmarks positioning using Surface Curvature Feature (SCF) is inspired by conventional methods of finding landmarks based on morphometrical features. Each cranial landmark has a unique shape. With the appropriate 3D descriptors, the computer can draw associations between shapes and landmarks using machine learning. The challenge in classification and detection in three-dimensional space is to determine the model and data representation. Using three-dimensional raw data in machine learning is a serious …