Data Science Commons^™

Application Of Machine Learning Algorithms For Elucidation Of Biological Networks From Time Series Gene Expression Data, Krupa Nagori

Computational and Data Sciences (PhD) Dissertations

This dissertation provides a deep dive into understanding gene expression, interaction, regulation, and the intricate mechanisms behind heliotropism and phototropism. Additionally, the research accentuates the significance of machine learning techniques, specifically for gene regulatory networks (GRNs).

Chapter 1 offers an exhaustive benchmarking of GRN methodologies, furthering our comprehension of machine-learning models relevant to GRNs. The evaluation revealed that GRNTE, SWING, and BiXGBoost emerged as top-performing methods in GRN inference. The suitability of these models varies depending on specific research criteria such as computational needs, dataset dimensions, and performance metric emphasis. An innovation of this chapter was the introduction of Colab …

Cannabidiol Tweet Miner: A Framework For Identifying Misinformation In Cbd Tweets., Jason Turner

Electronic Theses and Dissertations

As regulations surrounding cannabis continue to develop, the demand for cannabis-based products is on the rise. Despite not producing the psychoactive effects commonly associated with THC, products containing cannabidiol (CBD) have gained immense popularity in recent years as a potential treatment option for a range of conditions, particularly those associated with pain or sleep disorders. However, due to current federal policies, these products have yet to undergo comprehensive safety and efficacy testing. Fortunately, utilizing advanced natural language processing (NLP) techniques, data harvested from social networks have been employed to investigate various social trends within healthcare, such as disease tracking and …

The Rocket: Analyzing Rtp (Return To Player), Payoff Distribution And Player Behavior In Crash Games, Mikhail M. Sher, Robert Haywood Scott Iii, Jonathan A. Daigle

International Conference on Gambling & Risk Taking

Abstract

Rocket is a crash game developed by DraftKings, an American publicly traded online casino, sports betting and fantasy sports company. DraftKings Rocket is a game played with a rising rocket. Players must exit the rocket at any point before the rocket crashes. In that case they receive the payoff in accordance to the multiplier of their exit point. If the rocket crashes before the player bails, player’s payoff is 0 (and they lose their bet).

The game boasts an unprecedented 97% RTP (Return to Player). For comparison, Atlantic City casino slots typically have a 91-92% RTP, while Vegas casino …

Internship Thesis - Happy Egg Co., Annelise Koster

Data Science Undergraduate Honors Theses

This paper outlines a data science internship at Happy Egg Co, a producer of free-range eggs committed to sustainable agriculture practices. The internship focused on analyzing customer data to uncover characteristics of Happy Egg Co's target market and identify potential new markets for expansion.

The internship spanned a period of 10 weeks and involved working with the company's marketing and data science teams to gain practical experience in data cleaning, analysis, and visualization. The focus was on uncovering patterns and trends in customer behavior, preferences, and demographics to inform marketing strategies.

The internship began with an introduction to Happy Egg …

Sports Data Science Job Requirements, Cam E. Morse

Student Publications

Data science is an extremely fast growing field in which job opportunities are opening in every industry related to data science. Within the data science field is the sports data science industry which has it's own requirements and specificities that may not be present in other industries. In this paper, research is done using multiple job posting websites such as LinkedIn, Indeed, Sportstek jobs, and TeamworkOnline to explore the job descriptions of many different sports data science jobs. These job descriptions are then examined using Python coding to find the frequencies of specific data science skills in the various job …

Beyond News Values On Twitter: Predicting Factors That Drive User Engagement In News, Zhiyan Zhong

Dartmouth College Master’s Theses

When deciding on what news stories to cover, traditional journalism determines news values by following several elements of newsworthiness, such as impact, timeliness, and prominence. However, these guidelines do not always seem to correspond with the success of content on social media. As people are increasingly turning to social media for news, our research aims to understand and predict factors that drive user engagement for news on social media. In this study, we analyze news content published on Twitter, and examine a diverse set of characteristics like metrics retrieved from the Twitter API and semantics by natural language processing, including …

Application Of Big Data Technology, Text Classification, And Azure Machine Learning For Financial Risk Management Using Data Science Methodology, Oluwaseyi A. Ijogun

College of Graduate Studies: Theses & Dissertations

Data science plays a crucial role in enabling organizations to optimize data-driven opportunities within financial risk management. It involves identifying, assessing, and mitigating risks, ultimately safeguarding investments, reducing uncertainty, ensuring regulatory compliance, enhancing decision-making, and fostering long-term sustainability. This thesis explores three facets of Data Science projects: enhancing customer understanding, fraud prevention, and predictive analysis, with the goal of improving existing tools and enabling more informed decision-making. The first project examined leveraged big data technologies, such as Hadoop and Spark, to enhance financial risk management by accurately predicting loan defaulters and their repayment likelihood. In the second project, we investigated …

Development Of A Data Science Curriculum For An Engineering Technology Program, Salih Sarp, Murat Kuzlu, Otilia Popescu, Vukica M. Jovanovic, Zafer Acar

Engineering Technology Faculty Publications

Data science has gained the attention of various industries, educators, parents, and students thinking about their future careers. Statistics departments have traditionally offered data science courses for a long time. The main objective of these courses is to examine the fundamental concepts and theories. However, teaching data science courses has also expanded to other disciplines due to the vast amount of data being collected by numerous modern applications. Also, someone needs to learn how to collect and process data, especially from industrial devices, because of the recent development of Internet of Things (IoT) technologies. Hence, integrating data science into the …

Applying Data Science And Machine Learning To Understand Health Care Transition For Adolescents And Emerging Adults With Special Health Care Needs, Lisamarie Turk

Nursing ETDs

A problem of classification places adolescents and emerging adults with special health care needs among the most at risk for poor or life-threatening health outcomes. This preliminary proof-of-concept study was conducted to determine if phenotypes of health care transition (HCT) for this vulnerable population could be established. Such phenotypes could support development of future studies that require data classifications as input. Mining of electronic health record data and cluster analysis were implemented to identify phenotypes. Subsequently, a machine learning concept model was developed for predicting acute care and medical condition severity. Three clusters were identified and described (Cluster 1, n …

Supporting The Protect Initiative, Josh Lefton, Jackson Murray, Ahmed Thabet, Sriram Baireddy, Prakash Shukla, Mridul Gupta, Reagan Becker, Julie Ertle, Tony Doan, Aerin Yang

Purdue Journal of Service-Learning and International Engagement

Recently, medication dosage errors have received more political and media attention. Dosage errors are the most common medical errors, affecting about 1.5 million people annually.

Furthermore, U.S. poison-control centers reported more than 200,000 cases per year of medication errors. These cases result in medical costs of around $3.5 billion, and children under 6 years old constitute approximately 30% of these cases.

The PROTECT Initiative (Preventing Overdoses and Treatment Errors in Children Taskforce) was launched in 2008 as a collaborative effort between public health agencies and patient advocates to minimize dosage errors.

In alignment with the PROTECT Initiative effort, this project …

Lstm-Sdm: An Integrated Framework Of Lstm Implementation For Sequential Data Modeling[Formula Presented], Hum Nath Bhandari, Binod Rimal, Nawa Raj Pokhrel, Ramchandra Rimal, Keshab R. Dahal

Arts & Sciences Faculty Publications

LSTM-SDM is a python-based integrated computational framework built on the top of Tensorflow/Keras and written in the Jupyter notebook. It provides several object-oriented functionalities for implementing single layer and multilayer LSTM models for sequential data modeling and time series forecasting. Multiple subroutines are blended to create a conducive user-friendly environment that facilitates data exploration and visualization, normalization and input preparation, hyperparameter tuning, performance evaluations, visualization of results, and statistical analysis. We utilized the LSTM-SDM framework in predicting the stock market index and observed impressive results. The framework can be generalized to solve several other real-world time series problems.

Generating A Dataset For Comparing Linear Vs. Non-Linear Prediction Methods In Education Research, Jack Mauro, Elena Martinez, Anna Bargagliotti

Honors Thesis

Machine learning is often used to build predictive models by extracting patterns from large data sets. Such techniques are increasingly being utilized to predict outcomes in the social sciences. One such application is predicting student success. Machine learning can be applied to predicting student acceptance and success in academia. Using these tools for education-related data analysis, may enable the evaluation of programs, resources and curriculum. Currently, research is needed to examine application, admissions, and retention data in order to address equity in college computer science programs. However, most student-level data sets contain sensitive data that cannot be made public. To …

Dataset Evaluation For Data Trading Using Expected Loss And Homomorphic Encryption, Minsung Joo

Senior Honors Papers / Undergraduate Theses

Supervised machine learning suffers from the ``garbage-in garbage-out" phenomenon where the performance of a model is limited by the quality of the data. While a myriad of data is collected every second, there is no general rigorous method of evaluating the quality of a given dataset. This hinders fair pricing of data in scenarios where a buyer may look to buy data for use with machine learning. In this work, I propose using the expected loss corresponding to a dataset as a measure of its quality, relying on Bayesian methods for uncertainty quantification. Furthermore, I present a secure multi-party computation …

An Educator’S Perspective Of The Tidyverse, Mine Çetinkaya-Rundel, Johanna Hardin, Benjamin Baumer, Amelia Mcnamara, Nicholas J. Horton, Colin W. Rundel

Statistical and Data Sciences: Faculty Publications

Computing makes up a large and growing component of data science and statistics courses. Many of those courses, especially when taught by faculty who are statisticians by training, teach R as the programming language. A number of instructors have opted to build much of their teaching around use of the tidyverse. The tidyverse, in the words of its developers, “is a collection of R packages that share a high-level design philosophy and low-level grammar and data structures, so that learning one package makes it easier to learn the next” (Wickham et al. 2019). These shared principles have led to the …

How Graduate Student Fellows Enhance What A Center For Digital Scholarship Does, Ben B. Chiewphasa

Transforming Libraries for Graduate Students

Multiple disciplines are increasingly embracing data science and digital scholarship. However, insufficient training for digital and computational methodologies within subject/departmental silos means that these needs often get overlooked. Opportunities for learning how to teach technical concepts (i.e., how to handle troubleshooting, live participatory coding, etc.) are also rare or non-existent via departmental offerings. To respond to these needs, the Navari Family Center for Digital Scholarship launched its Pedagogy Fellowship Program in Fall 2021 where Notre Dame PhD students/candidates build their instructional expertise and experience related to digital scholarship with an added bonus of enhancing their competitiveness on the job market. …

Air Pollution, Climate Change, And Our Health, Kathia Vargas Feliz

Dissertations, Theses, and Capstone Projects

Climate change is a subject that is creating a lot of controversies nowadays. From newspapers to researchers, there are big efforts going on trying to bring awareness about the effects of air pollution and climate change over time. It is recommended that governments all over the world, and people from all communities act by taking care of the environment because the situation might turn out to be irremediable. There is a quote by Leonardo Dicaprio stating, “Climate change is real. It is happening right now; it is the most urgent threat facing our entire species and we need to …

The Data Analytics And The Science Revolution, Leila Halawi, Amal Clarke, Kelly George

Publications

This text highlights the difference between analytics and data science, using predictive analytic techniques to analyze different historical data, including aviation data and concrete data, interpreting the predictive models, and highlighting the steps to deploy the models and the steps ahead. The book combines the conceptual perspective and a hands-on approach to predictive analytics using SAS VIYA, an analytic and data management platform. The authors use SAS VIYA to focus on analytics to solve problems, highlight how analytics is applied in the airline and business environment, and compare several different modeling techniques. They decipher complex algorithms to demonstrate how they …

Finding The Best Predictors For Foot Traffic In Us Seafood Restaurants, Isabel Paige Beaulieu

Honors Theses and Capstones

COVID-19 caused state and nation-wide lockdowns, which altered human foot traffic, especially in restaurants. The seafood sector in particular suffered greatly as there was an increase in illegal fishing, it is made up of perishable goods, it is seasonal in some places, and imports and exports were slowed. Foot traffic data is useful for business owners to have to know how much to order, how many employees to schedule, etc. One issue is that the data is very expensive, hard to get, and not available until months after it is recorded. Our goal is to not only find covariates that …

Hydrocarbon Pay Zone Prediction Using Ai Neural Network Modeling., Darren D. Guedon

Graduate Theses, Dissertations, and Problem Reports (ETD)

This paper captures the ability of AI neural network technology to analyze petrophysical datasets for pattern recognition and accurate prediction of the pay zone of a vertical well from the Santa Fe field in Kansas.

During this project, data from 10 completed wells in the Santa Fe field were gathered, resulting in a dataset with 25,580 records, ten predictors (logs data), and a single binary output (Yes or No) to identify the availability of Hydrocarbon over a half feet depth segment in the well. Several models composed of different predictors combinations were also tested to determine how impactful some logs …

A Citizen-Science Approach For Urban Flood Risk Analysis Using Data Science And Machine Learning, Candace Agonafir

Dissertations and Theses

Street flooding is problematic in urban areas, where impervious surfaces, such as concrete, brick, and asphalt prevail, impeding the infiltration of water into the ground. During rain events, water ponds and rise to levels that cause considerable economic damage and physical harm. The main goal of this dissertation is to develop novel approaches toward the comprehension of urban flood risk using data science techniques on crowd-sourced data. This is accomplished by developing a series of data-driven models to identify flood factors of significance and localized areas of flood vulnerability in New York City (NYC). First, the infrastructural (catch basin clogs, …

Messiness: Automating Iot Data Streaming Spatial Analysis, Christopher White, Atilio Barreda Ii

Publications and Research

The spaces we live in go through many transformations over the course of a year, a month, or a day; My room has seen tremendous clutter and pristine order within the span of a few hours. My goal is to discover patterns within my space and formulate an understanding of the changes that occur. This insight will provide actionable direction for maintaining a cleaner environment, as well as provide some information about the optimal times for productivity and energy preservation.

Using a Raspberry Pi, I will set up automated image capture in a room in my home. These images will …

Quantitative Intersectional Data (Quinta): A #Metoo Case Study, Alicia E. Boyd

College of Computing and Digital Media Dissertations

This research began as an investigation of the #metoo movement, with the initial impetus to illuminate the voices located on the margins, those who often go unheard or are never recognized. This work aimed to understand the intersectional aspects of how these hashtag variations of the hashtag #metoo (i.e. #metoomosque, #churchtoo, #metoodisable, #metooqueer, #metoochina, etc) reveal the inequities of the #metoo movement on Twitter. The proliferation of these hashtag variations has often been ignored by scholars, and therefore absorbed into the larger #metoo movement conversation on Twitter. Therefore, the term `hashtag derivative' was created to describe the variation on the …

Using Data Mining To Identify The Most Influential Factors In Training Results, Xiaoqing Wu, Daanial Ahmad

Publications and Research

Data Science is used as a tool to find hidden facts in the data. We want to find out what factors such as ‘AGE’, ‘TAX’, ‘PUPIL-TEACHER RATIO’, ‘PER-CAPITA INCOME’ contribute the most to housing prices. To answer this question, we studied the dataset of “Boston Houses Prices”. By applying the Lasso Regression (a Data Mining Technique) on the data set of “Boston Houses Prices” we identified the influential factors in the linear model. As a conclusion we found that there were six inputs which contributed the most to the prices of houses and those inputs are as follow: (i) CRIM-per …

A Systematic Literature Survey Of Unmanned Aerial Vehicle Based Structural Health Monitoring, Sreehari Sreenath

Theses, Dissertations and Capstones

Unmanned Aerial Vehicles (UAVs) are being employed in a multitude of civil applications owing to their ease of use, low maintenance, affordability, high-mobility, and ability to hover. UAVs are being utilized for real-time monitoring of road traffic, providing wireless coverage, remote sensing, search and rescue operations, delivery of goods, security and surveillance, precision agriculture, and civil infrastructure inspection. They are the next big revolution in technology and civil infrastructure, and it is expected to dominate more than $45 billion market value. The thesis surveys the UAV assisted Structural Health Monitoring or SHM literature over the last decade and categorize UAVs …

Mapping Opioid Mortality Rates Across Treatment Capacity To Identify Need And Access, Garrett K. Wong, Justin R. Chang, Chase Greco, Yadunandan Pillai, Mohammad A. Shahrezaei, Melissa H. Burton, Rob Lawrence, Alan Dow

Graduate Research Posters

Background: The opioid and heroin overdose epidemic is a public health emergency in the state of Virginia, resulting in the death of more than 1,100 people in 2016. In order to overcome this epidemic, we need to match the places with the greatest need for services related to substance use disorders with the appropriate healthcare workforce.

Aims: As the data about the overdose outbreak and related socioeconomic factors grow in size and complexity, data scientists have attempted to utilize big data techniques to identify communities and risk factors contributing to addiction.

Methods: Using data obtained from the …

Visualizing The Opioid Overdose With A Dynamic Heat Map To Identify And Predict Vulnerable Communities, Justin R. Chang, Garrett K. Wong, Chase Greco, Yadunandan Pillai, Mohammad A. Shahrezaei, Melissa H. Burton, Rob Lawrence, Alan Dow

Graduate Research Posters

Background: Opioid and heroin overdose epidemic is a public health emergency in the state of Virginia. In order to prevent overdose deaths, we need the target expertise in substance use disorders to areas with high rates of overdose. In particular, an area with an acute spike in overdoses might represent an urgent need for intervention.

Aims: The CDC urges the use of near real-time surveillance to effectively identify overdose incidence, and to coordinate community responses in the states affected by the epidemic, including Virginia. However, current opioid overdose datasets for Virginia lack adequate consistency, granularity, and temporality for …

Degradation Science: Mesoscopic Evolution And Temporal Analytics Of Photovoltaic Energy Materials, Roger H. French, Rudolf Podgornik, Timothy J. Peshek, Laura S. Bruckman, Yifan Xu, Nicholas R. Wheeler, Abdulkerim Gok, Yang Hu, Mohammad A. Hossain, Devin A. Gordon, Pei Zhao, Jiayang Sun, Guo-Qiang Zhang

Faculty Scholarship

Based on recent advances in nanoscience, data science and the availability of massive real-world datastreams, the mesoscopic evolution of mesoscopic energy materials can now be more fully studied. The temporal evolution is vastly complex in time and length scales and is fundamentally challenging to scientific understanding of degradation mechanisms and pathways responsible for energy materials evolution over lifetime. We propose a paradigm shift towards mesoscopic evolution modeling, based on physical and statistical models, that would integrate laboratory studies and real-world massive datastreams into a stress/mechanism/response framework with predictive capabilities. These epidemiological studies encompass the variability in properties that affect performance …

Scalable Combinatorial Tools For Health Disparities Research, Michael A. Langston, Robert S. Levine, Barbara J. Kilbourne, Gary L. Rogers Jr., Anne D. Kershenbaum, Suzanne H. Baktash, Steven S. Coughlin, Arnold M. Saxton, Vincent K. Agboto, Darryl B. Hood, Maureen Y. Litchveld, Tonny J. Oyana, Patricia Matthews-Juarez, Paul D. Juarez

Sociology Faculty Research

Despite staggering investments made in unraveling the human genome, current estimates suggest that as much as 90% of the variance in cancer and chronic diseases can be attributed to factors outside an individual’s genetic endowment, particularly to environmental exposures experienced across his or her life course. New analytical approaches are clearly required as investigators turn to complicated systems theory and ecological, place-based and life-history perspectives in order to understand more clearly the relationships between social determinants, environmental exposures and health disparities. While traditional data analysis techniques remain foundational to health disparities research, they are easily overwhelmed by the ever-increasing size …