Data Science Commons^™

Annotation And Information Extraction Of Consumer-Friendly Health Articles For Enhancing Laboratory Test Reporting, Zhe He, Shubo Tian, Arslan Erdengasileng, Karim Hanna, Yang Gong, Zhan Zhang, Xiao Luo, Mia Liza A Lustria

Faculty, Staff and Student Publications

Viewing laboratory test results is patients' most frequent activity when accessing patient portals, but lab results can be very confusing for patients. Previous research has explored various ways to present lab results, but few have attempted to provide tailored information support based on individual patient's medical context. In this study, we collected and annotated interpretations of textual lab result in 251 health articles about laboratory tests from AHealthyMe.com. Then we evaluated transformer-based language models including BioBERT, ClinicalBERT, RoBERTa, and PubMedBERT for recognizing key terms and their types. Using BioPortal's term search API, we mapped the annotated terms to concepts in …

Development Of A Data Science Curriculum For An Engineering Technology Program, Salih Sarp, Murat Kuzlu, Otilia Popescu, Vukica M. Jovanovic, Zafer Acar

Engineering Technology Faculty Publications

Data science has gained the attention of various industries, educators, parents, and students thinking about their future careers. Statistics departments have traditionally offered data science courses for a long time. The main objective of these courses is to examine the fundamental concepts and theories. However, teaching data science courses has also expanded to other disciplines due to the vast amount of data being collected by numerous modern applications. Also, someone needs to learn how to collect and process data, especially from industrial devices, because of the recent development of Internet of Things (IoT) technologies. Hence, integrating data science into the …

Automating Intersection Marking Data Collection And Condition Assessment At Scale With An Artificial Intelligence-Powered System, Kun Xie, Huiming Sun, Xiaomeng Dong, Hong Yang, Hongkai Yu

Civil & Environmental Engineering Faculty Publications

Intersection markings play a vital role in providing road users with guidance and information. The conditions of intersection markings will be gradually degrading due to vehicular traffic, rain, and/or snowplowing. Degraded markings can confuse drivers, leading to increased risk of traffic crashes. Timely obtaining high-quality information of intersection markings lays a foundation for making informed decisions in safety management and maintenance prioritization. However, current labor-intensive and high-cost data collection practices make it very challenging to gather intersection data on a large scale. This paper develops an automated system to intelligently detect intersection markings and to assess their degradation conditions with …

Biodiversity Of Philippine Marine Fishes: A Dna Barcode Reference Library Based On Voucher Specimens, Katherine E. Bemis, Matthew G. Girard, Mudjekeewis D. Santos, Kent E. Carpenter, Jonathan R. Deeds, Diane E. Pitassy, Nicko Amor L. Flores, Elizabeth S. Hunter, Amy C. Driskell, Kenneth S. Macdonald Iii, Lee A. Weigt, Jeffrey T. Williams

Biological Sciences Faculty Publications

Accurate identification of fishes is essential for understanding their biology and to ensure food safety for consumers. DNA barcoding is an important tool because it can verify identifications of both whole and processed fishes that have had key morphological characters removed (e.g., filets, fish meal); however, DNA reference libraries are incomplete, and public repositories for sequence data contain incorrectly identified sequences. During a nine-year sampling program in the Philippines, a global biodiversity hotspot for marine fishes, we developed a verified reference library of cytochrome c oxidase subunit I (COI) sequences for 2,525 specimens representing 984 species. Specimens were primarily purchased …

A Data Analysis On Mass Shootings In Amercia, James Hinkle, Patrick Mccool

Capstone Showcase

Mass shootings in America have been a recurring issue for years. In this project, we examine mass shootings that have occurred in the United States from 1966 to 2022. Through exploratory data analyses, we explore patterns and trends in shooting events, as well as various patterns in shooters, such as their mental health status, relationship status, social media usage, evidence of trauma in adulthood, and ongoing stressors during the time of the shooting. We also utilize natural language processing (NLP) tools to analyze text information in the dataset, such as the shooters' school performance, community involvement, and past signs of …

Quantifying The Carbon Stored And Sequestered By The Trees On Pomona College’S Campus, Paola A. Giron-Carson

Scripps Senior Theses

We are experiencing a climate crisis that must be confronted with strategic mitigation. Pomona College contributes to the climate crisis through its emissions for which there is a baseline record. However there is no baseline record of the climate mitigation currently performed by the trees on Pomona’s campus through carbon storage. This study seeks to determine a current baseline quantity of carbon stored and sequestrated by Pomona’s trees as well as possible courses of climate mitigation for Pomona College to take. Initial information gathering was conducted through interviews with several stakeholders. This study was conducted using data collected prior to …

Predicting Housing Prices Using Ai, Eric Sconyers

Williams Honors College, Honors Research Projects

I have created an AI model that can predict housing prices with 70 percent accuracy in Ames Iowa. I was able to use data from a website called Kaggle.com which is a website that provides datasets to the public so they can create AI models with the data. I found the dataset pertaining to housing prices in Ames Iowa. With this data, I was able to create an AI model that can predict the housing price of these homes. The technology I used in this project was Python as the programming language, and I used the scikit-learn library which has …

Modeling The Bidirectional Relationship Between Shared-Patient Physician Networks And Patient Longitudinal Treatment Patterns: Application To Physician Risky-Prescribing, Xin Ran

Dartmouth College Ph.D Dissertations

Risky-prescribing is a pressing public health concern in the United States. Opioids, benzodiazepines, and non-benzodiazepine sedative-hypnotics (sedative-hypnotics) are three commonly-prescribed but potentially risky drug groups, prescribed alone or in combination. Physician shared-patient networks provide a unique perspective in studying physician network characteristics and structures, as well as their association with the delivery of health care. Understanding how physician shared-patient networks are related to their prescribing may inform network-based interventions targeting risky-prescribing, which is yet to be fully studied.

We investigated patient receipt of risky prescriptions and physician risky-prescribing intensity through the scope of shared-patient networks. We used retrospective Medicare insurance …

The Bias Report: An Automated News Aggregator For Political Bias Classification And News Summarization, Anant Joshi

Master's Projects

Political polarization is on the rise in the US, driven in large part by divisive news that goes viral on the Internet. Specifically, many media outlets use slanted language and publish misinformation in order to drive user traffic and engagement. Almost 80% of US citizens get their news from online sources, but there is a lack of public safeguards against biased news. A large amount of news is published online every day by media organizations, and it is impossible to manually analyze this amount of data. There is a clear need for automated, public-facing solutions in the current political climate …

Dynamic Predictions Of Thermal Heating And Cooling Of Silicon Wafer, Hitesh Kumar

Master's Projects

Neural Networks are now emerging in every industry. All the industries are trying their best to exploit the benefits of neural networks and deep learning to make predictions or simulate their ongoing process with the use of their generated data. The purpose of this report is to study the heating pattern of a silicon wafer and make predictions using various machine learning techniques. The heating of the silicon wafer involves various factors ranging from number of lamps, wafer properties and points taken in consideration to capture the heating temperature. This process involves dynamic inputs which facilitates the heating of the …

Natural Language Processing In Legal Tech, Jens Frankenreiter, Julian Nyarko

Scholarship@WashULaw

Natural language processing techniques promise to automate an activity that lies at the core of many tasks performed by lawyers, namely the extraction and processing of information from unstructured text. The relevant methods are thought to be a key ingredient for both current and future legal tech applications. This chapter provides a non-technical overview of the current state of NLP techniques, focusing on their promise and potential pitfalls in the context of legal tech applications. It argues that, while NLP-powered legal tech can be expected to outperform humans in specific categories of tasks that play to the strengths of current …

Comparative Analysis Of Fullstack Development Technologies: Frontend, Backend And Database, Qozeem Odeniran

College of Graduate Studies: Theses & Dissertations

Accessing websites with various devices has brought changes in the field of application development. The choice of cross-platform, reusable frameworks is very crucial in this era. This thesis embarks in the evaluation of front-end, back-end, and database technologies to address the status quo. Study-a explores front-end development, focusing on angular.js and react.js. Using these frameworks, comparative web applications were created and evaluated locally. Important insights were obtained through benchmark tests, lighthouse metrics, and architectural evaluations. React.js proves to be a performance leader in spite of the possible influence of a virtual machine, opening the door for additional research. Study b …

Generalized Sparse Bayesian Learning And Application To Image Reconstruction, Jan Glaubitz, Anne Gelb, Guohui Song

Mathematics & Statistics Faculty Publications

Image reconstruction based on indirect, noisy, or incomplete data remains an important yet challenging task. While methods such as compressive sensing have demonstrated high-resolution image recovery in various settings, there remain issues of robustness due to parameter tuning. Moreover, since the recovery is limited to a point estimate, it is impossible to quantify the uncertainty, which is often desirable. Due to these inherent limitations, a sparse Bayesian learning approach is sometimes adopted to recover a posterior distribution of the unknown. Sparse Bayesian learning assumes that some linear transformation of the unknown is sparse. However, most of the methods developed are …

Using Long Short-Term Memory (Lstm) Networks With The Toy Model Concept For Compressible Pulsatile Flow Metering, Indranil Brahma

Faculty Journal Articles

The metering of periodically oscillating pulsating flow has traditionally relied on eliminating pulsations, which is not possible for many systems such as internal combustion engines. Recent advances in the Deep Learning Suite of tools allow the extraction of useful information from complex signals acquired by inexpensive sensors. In this work, Long Short-Term Memory (LSTM) networks have been proposed to meter highly compressible pulsatile flow by learning the relationship between the average flow rate and the temporal patterns of standard orifice measurements. The model was built and evaluated with separate training and testing datasets that had different pulsation frequencies and waveforms. …

An Explainable Deep Learning Prediction Model For Severity Of Alzheimer's Disease From Brain Images, Godwin O. Ekuma

Graduate Theses/Dissertations

Deep Convolutional Neural Networks (CNNs) have become the go-to method for medical imaging classification on various imaging modalities for binary and multiclass problems. Deep CNNs extract spatial features from image data hierarchically, with deeper layers learning more relevant features for the classification application. The effectiveness of deep learning models are hampered by limited data sets, skewed class distributions, and the undesirable "black box" of neural networks, which decreases their understandability and usability in precision medicine applications. This thesis addresses the challenge of building an explainable deep learning model for a clinical application: predicting the severity of Alzheimer's disease (AD). AD …

Feature Extraction Of Footwear Impression Images For Quality Assessment, Alexandra Hill

Graduate Theses, Dissertations, and Problem Reports (ETD)

Forensic footwear impression analysis is a valuable tool in criminal investigations. Extracting useful features from images of footwear impressions is a critical step in this process. However, the quality of these images can vary widely, making feature extraction challenging. In order to give a quality assessment rating to a footwear impression image, the image should first be analyzed to extract features from the impression. In this paper, we present a method to extract features from a 2D grayscale footwear impression image. A Hierarchical Grid Model implementation has been adapted from use on a 3D dataset to assist in finding features, …

Optimal Design And Operation Of Integrated Hydrogen Generation And Utilization Plants, Ijiwole Solomon Ijiyinka

Graduate Theses, Dissertations, and Problem Reports (ETD)

There are considerable efforts worldwide for reducing the use of fossil fuel for energy production. While renewable energy sources are being increasingly used, fossil fuel still contribute about 80% of the energy used worldwide. As a result, the level of CO₂ is still increasing fast in the atmosphere currently exceeding about 410 parts per million (ppm). For reducing CO₂ build up in the atmosphere, various approaches are being investigated. For the electric power generation sector, two key approaches are post-combustion CO₂ capture and use of hydrogen as a fuel for power generation. These two solutions can also …

Dental Claires: Contrastive Language Image Retrieval Search For Dental Research, Tanjida Kabir, Luyao Chen, Muhammad F Walji, Luca Giancardo, Xiaoqian Jiang, Shayan Shams

Faculty, Staff and Student Publications

Learning about diagnostic features and related clinical information from dental radiographs is important for dental research. However, the lack of expert-annotated data and convenient search tools poses challenges. Our primary objective is to design a search tool that uses a user's query for oral-related research. The proposed framework,

Extracting Road Surface Marking Features From Aerial Images Using Deep Learning, Michael Kimollo

UNF Graduate Theses and Dissertations

The traffic and roadway safety agencies spend significant efforts each year collecting roadway data, including lane configurations and other road surface marking data, such as areas with school zone markings, sidewalks, left turns, right turns, bicycle lanes, etc., for safety analysis and planning purposes. The current manual data collection methods pose significant operational and quality control challenges as they are costly and prone to errors. In addition to that the manual data collection is labor intensive and takes too much time involving high equipment costs, questionable data accuracy guarantees, and concerns about the safety of the crew.

This study aims …

Development Of Machine Learning Based Approach To Predict Fuel Consumption And Maintenance Cost Of Heavy-Duty Vehicles Using Diesel And Alternative Fuels, Sasanka Katreddi

Graduate Theses, Dissertations, and Problem Reports (ETD)

One of the major contributors of human-made greenhouse gases (GHG) namely carbon dioxide (CO2), methane (CH4), and nitrous oxide (NOX) in the transportation sector and heavy-duty vehicles (HDV) contributing to about 27% of the overall fraction. In addition to the rapid increase in global temperature, airborne pollutants from diesel vehicles also present a risk to human health. Even a small improvement that could potentially drive energy savings to the century-old mature diesel technology could yield a significant impact on minimizing greenhouse gas emissions. With the increasing focus on reducing emissions and operating costs, there is a need for efficient and …

Multimodal Neuron Classification Based On Morphology And Electrophysiology, Aqib Ahmad

Graduate Theses, Dissertations, and Problem Reports (ETD)

Categorizing neurons into different types to understand neural circuits and ultimately brain function is a major challenge in neuroscience. While electrical properties are critical in defining a neuron, its morphology is equally important. Advancements in single-cell analysis methods have allowed neuroscientists to simultaneously capture multiple data modalities from a neuron. We propose a method to classify neurons using both morphological structure and electrophysiology. Current approaches are based on a limited analysis of morphological features. We propose to use a new graph neural network to learn representations that more comprehensively account for the complexity of the shape of neuronal structures. In …

Longitudinal Sport Science Implementation In American Collegiate Men’S Basketball, Jason Stone

Graduate Theses, Dissertations, and Problem Reports (ETD)

The expanding opportunities to implement sport science frameworks in elite-level basketball environments coincide with the sport’s increasing global prominence. Concomitant to these opportunities is the continual growth of the sport technology market (e.g., wearables, force plates) and computational power (e.g., data management tools, coding capabilities), which yields solutions and challenges for both athletes and practitioners. Due to the rapid influx of new sport technologies in high performance environments, particularly American Collegiate Men’s Basketball, more formal and ecologically valid research on how to effectively utilize data derived from them, particularly over long periods of time (i.e., multiple seasons) is needed. To …

Breast Density Classification Using Deep Learning, Conrad Thomas Testagrose

UNF Graduate Theses and Dissertations

Breast density screenings are an accepted means to determine a patient's predisposed risk of breast cancer development. Although the direct correlation is not fully understood, breast cancer risk increases with higher levels of mammographic breast density. Radiologists visually assess a patient's breast density using mammogram images and assign a density score based on four breast density categories outlined by the Breast Imaging and Reporting Data Systems (BI-RADS). There have been efforts to develop automated tools that assist radiologists with increasing workloads and to help reduce the intra- and inter-rater variability between radiologists. In this thesis, I explored two deep-learning-based approaches …

Exploring Information Leakage In Historical Stock Market Data, Edison Hua

Dissertations and Theses

Information leakage is a major concern for traders who want to execute large orders without affecting the market price. In this paper, we explore the sources and effects of information leakage in historical stock market data using various methods and metrics. We first define information leakage as a pattern caused by a trader that would otherwise not occur without the trader’s activity. Using historical data, the direct impact of a potential large trade cannot be measured, but we consider a minimal impact large trade to be one that minimizes changes to the established trading data. We then analyze how information …

Network Intrusion Detection Using Deep Reinforcement Learning, Hamed T. Sanusi

College of Graduate Studies: Theses & Dissertations

This thesis delves into cybersecurity by applying Deep Reinforcement(DRL) Learning in network intrusion detection. One advantage of DRL is the ability to adapt to changing network conditions and evolving attack methods, making it a promising solution for addressing the challenges involved in intrusion detection. The thesis will also discuss the obstacles and benefits of using Classification methods for network intrusion detection and the need for high-quality training data. To train and test our proposed method, the NSL-KDD dataset was used and then adjusted by converting it from a multi-classification to a binary classification, achieved by joining all attacks into one. …

Web Traffic Time Series Forecasting, Summanth Redde Mulkkalla

Master's Projects

Online web traffic forecasting is one of the most crucial elements of maintaining and improving websites and digital platforms. Traffic patterns usually predict future online traffic, including page views, unique visitors, session duration, and bounce rates. However, it is challenging to forecast non-stationary online web traffic, particularly when the data has spikes or irregular patterns. This non-stationary property demands a more advanced forecasting technique. In this study, we provide a neural networkbased method, Spiking Neural Networks (SNNs), for dealing with the data spikes and irregular patterns in non-stationary data. In our study, we compared the forecasting results of SNNs with …

Application Of Knowledge Graph Techniques On Textbooks, Yutong Yao

Master's Projects

Textbooks are written and organized in a way that facilitates learning and understanding. Sections like glossary terms at the end of a textbook provide guidance on the topic of interest. However, it takes manual effort to create the index terms in the glossary that highlight the key referenced terminologies and related terms. Knowledge graphs, which have been used to represent and even reason over data and knowledge, can potentially capture textbook’s important terms, concepts, and their relations. Popular since the initial introduction by Google Knowledge Graphs (KGs), they combine graph and data to capture and model enormous amounts of relational …

Transfer Learning Using Infrared And Optical Full Motion Video Data For Gender Classification, Alexander M. Glandon, Joe Zalameda, Khan M. Iftekharuddin, Gabor F. Fulop (Ed.), David Z. Ting (Ed.), Lucy L. Zheng (Ed.)

Electrical & Computer Engineering Faculty Publications

This work is a review and extension of our ongoing research in human recognition analysis using multimodality motion sensor data. We review our work on hand crafted feature engineering for motion capture skeleton (MoCap) data, from the Air Force Research Lab for human gender followed by depth scan based skeleton extraction using LIDAR data from the Army Night Vision Lab for person identification. We then build on these works to demonstrate a transfer learning sensor fusion approach for using the larger MoCap and smaller LIDAR data for gender classification.

An Investigation Of Methods For Improving Spatial Invariance Of Convolutional Neural Networks For Image Classification, David Noel

CCAC Theses and Dissertations

Convolutional Neural Networks (CNNs) have achieved impressive results on complex visual tasks such as image recognition. They are commonly assumed to be spatially invariant to small transformations of their input images. Spatial invariance is a fundamental property that characterizes how a model reacts to input transformations, i.e., its generalizability - and deep networks that can robustly classify objects placed in different orientations or lighting conditions have the property of invariance. However, several authors have recently shown that this is not the case, and that slight rotations, translations, or rescaling of their input images significantly reduce the network’s predictive accuracy. Furthermore, …

Face Anti-Spoofing And Deep Learning Based Unsupervised Image Recognition Systems, Enoch Solomon

Theses and Dissertations

One of the main problems of a supervised deep learning approach is that it requires large amounts of labeled training data, which are not always easily available. This PhD dissertation addresses the above-mentioned problem by using a novel unsupervised deep learning face verification system called UFace, that does not require labeled training data as it automatically, in an unsupervised way, generates training data from even a relatively small size of data. The method starts by selecting, in unsupervised way, k-most similar and k-most dissimilar images for a given face image. Moreover, this PhD dissertation proposes a new loss function to …