Data Science Commons^™

Research Focus: Pattern Recognition

In The Loop

A CDM health informatics team joins a global race to advance COVID-19 diagnostics through X-ray insights.

Spring 2021

In The Loop

IRL Programs Debut; Short & Sweet Pandemic Film Fest; New MS in Artificial Intelligence; Virtual Experts Talks; DePaul Trustee Producing Documentary; DemonHacks Hackathon; Silicon Valley 2.0: The DePaul Innovation Development Lab connects students and companies to spark solutions to technological challenges; Code Warrior: Ovetta Sampson has risen to challenges in digital design, journalism and athletics while inspiring others; Pattern Recognition: A CDM health informatics team joins a global race to advance COVID-19 diagnostics through X-ray insights

Profile Modeling In Hierarchical Deep Architecture By Mutual Support, Honglai Peng, Meng Han, Jing (Selena) He

Master of Science in Computer Science Theses

Despite significant advances in the field of face analysis over last decade, the current studies are still limited to specific face computation tasks using deep learning approaches. In this paper, we propose an end-to-end hierarchical deep learning structure, called Multi-Features Convolutional Neural Networks (MFCNN), which can comprehensively implement face analysis including age, gender, race and emotion. Moreover, we take the advantages of the mutual support among different facial features from individual tasks to improve the performance of our model. We also contribute one all-labeling dataset called Multiple Facial Features Computation (MFFC) based on Apparent-age-V2 dataset. Firstly, we train four different …

Using Deep Learning For Children Brain Image Analysis, Rafael Toche Pizano

Computer Science and Computer Engineering Undergraduate Honors Theses

Analyzing the correlation between brain volumetric/morphometry features and cognition/behavior in children is important in the field of pediatrics as identifying such relationships can help identify children who may be at risk for illnesses. Understanding these relationships can not only help identify children who may be at risk of illnesses, but it can also help evaluate strategies that promote brain development in children. Currently, one way to do this is to use traditional statistical methods such as a correlation analysis, but such an approach does not make it easy to generalize and predict how brain volumetric/morphometry will impact cognition/behavior. One of …

Improving Bayesian Graph Convolutional Networks Using Markov Chain Monte Carlo Graph Sampling, Aneesh Komanduri

Computer Science and Computer Engineering Undergraduate Honors Theses

In the modern age of social media and networks, graph representations of real-world phenomena have become incredibly crucial. Often, we are interested in understanding how entities in a graph are interconnected. Graph Neural Networks (GNNs) have proven to be a very useful tool in a variety of graph learning tasks including node classification, link prediction, and edge classification. However, in most of these tasks, the graph data we are working with may be noisy and may contain spurious edges. That is, there is a lot of uncertainty associated with the underlying graph structure. Recent approaches to modeling uncertainty have been …

Using Large Pre-Trained Language Models To Track Emotions Of Cancer Patients On Twitter, Will Baker

Computer Science and Computer Engineering Undergraduate Honors Theses

Twitter is a microblogging website where any user can publicly release a message, called a tweet, expressing their feelings about current events or their own lives. This candid, unfiltered feedback is valuable in the spaces of healthcare and public health communications, where it may be difficult for cancer patients to divulge personal information to healthcare teams, and randomly selected patients may decline participation in surveys about their experiences. In this thesis, BERTweet, a state-of-the-art natural language processing (NLP) model, was used to predict sentiment and emotion labels for cancer-related tweets collected in 2019 and 2020. In longitudinal plots, trends in …

Using Deep Learning To Analyze Materials In Medical Images, Carson Molder

Computer Science and Computer Engineering Undergraduate Honors Theses

Modern deep learning architectures have become increasingly popular in medicine, especially for analyzing medical images. In some medical applications, deep learning image analysis models have been more accurate at predicting medical conditions than experts. Deep learning has also been effective for material analysis on photographs. We aim to leverage deep learning to perform material analysis on medical images. Because material datasets for medicine are scarce, we first introduce a texture dataset generation algorithm that automatically samples desired textures from annotated or unannotated medical images. Second, we use a novel Siamese neural network called D-CNN to predict patch similarity and build …

A Smarter Way To Manage Mass Transit In A Smart City: Rail Network Management At Singapore’S Land Transport Authority, Steven M. Miller, Thomas H. Davenport

Research Collection School Of Computing and Information Systems

There is no widely agreed upon definition of a supposed “Smart City.” Yet, when you see city employees — in this case city-state employees — working in what are obviously smarter ways, “you know it when you see it.” One such example of a smarter way to work in a smart city setting is the way that employees of the Land Transport Authority (LTA) in Singapore are using a new generation of data driven, AI-enabled support systems to manage the city’s urban rail network. We spoke to LTA officers Kong Wai, Ho (Director of Integrated Operations and Planning) and Chris …

Visual Analysis Of Historical Lessons Learned During Exercises For The United States Air Force Europe (Usafe), Samantha O'Rourke

Theses/Capstones/Creative Projects

Within the United States Air Force, there are repeated patterns of differences observed during exercises. After an exercise is completed, forms are filled out detailing observations, successes, and recommendations seen throughout the exercise. At the most, no two reports are identical and must be analyzed by personnel and then categorized based on common themes observed. Developing a computer application will greatly reduce the time and resources used to analyze each After Action Report. This application can visually represent these observations and optimize the effectiveness of these exercises. The visualization is done through graphs displaying the frequency of observations and recommendations. …

Application Of Machine Learning Techniques To Forecast Harmful Algal Blooms In Gulf Of Mexico, Bala Tripura Sundari Yerrapothu

Master's Theses

The Harmful Algal Blooms (HABs) forecast is crucial for the mitigation of health hazards and to inform actions for the protection of ecosystems and fisheries in the Gulf of Mexico (GoM). For the sake of simplicity of our application we assume ocean color satellite imagery from the National Oceanic and Atmospheric Administration as a proxy for HABs.

In this study we use a deep neural network trained on the 2-Dimensional time series proxy data to provide a forecast of the HABs’ manifestations in the GoM.Our approach analyzes between both spatial and temporal features simultaneously. In addition, the network also helps …

Machine Learning Approaches To Dribble Hand-Off Action Classification With Sportvu Nba Player Coordinate Data, Dembe Stephanos

Electronic Theses and Dissertations

Recently, strategies of National Basketball Association teams have evolved with the skillsets of players and the emergence of advanced analytics. One of the most effective actions in dynamic offensive strategies in basketball is the dribble hand-off (DHO). This thesis proposes an architecture for a classification pipeline for detecting DHOs in an accurate and automated manner. This pipeline consists of a combination of player tracking data and event labels, a rule set to identify candidate actions, manually reviewing game recordings to label the candidates, and embedding player trajectories into hexbin cell paths before passing the completed training set to the classification …

Using Deep Learning To Automate The Diagnosis Of Skin Melanoma, Akhil Reddy Alasandagutti

Honors Theses

Machine learning and image processing techniques have been widely implemented in the field of medicine to help accurately diagnose a multitude of medical conditions. The automated diagnosis of skin melanoma is one such instance. However, a majority of the successful machine learning models that have been implemented in the past have used deep learning approaches where only raw image data has been utilized to train machine learning models, such as neural networks. While they have been quite effective at predicting the condition of these lesions, they lack key information about the images, such as clinical data, and features that medical …

Improving Treatment Of Local Liver Ablation Therapy With Deep Learning And Biomechanical Modeling, Brian Anderson, Kristy Brock, Laurence Court, Carlos Eduardo Cardenas, Erik Cressman, Ankit Patel

Dissertations and Theses (Open Access)

In the United States, colorectal cancer is the third most diagnosed cancer, and 60-70% of patients will develop liver metastasis. While surgical liver resection of metastasis is the standard of care for treatment with curative intent, it is only avai lable to about 20% of patients. For patients who are not surgical candidates, local percutaneous ablation therapy (PTA) has been shown to have a similar 5-year overall survival rate. However, PTA can be a challenging procedure, largely due to spatial uncertainties in the localization of the ablation probe, and in measuring the delivered ablation margin.

For this work, we hypothesized …

Exploring Ai And Multiplayer In Java, Ronni Kurtzhals

Student Academic Conference

I conducted research into three topics: artificial intelligence, package deployment, and multiplayer servers in Java. This research came together to form my project presentation on the implementation of these topics, which I felt accurately demonstrated the various things I have learned from my courses at Moorhead State University. Several resources were consulted throughout the project, including the work of W3Schools and StackOverflow as well as relevant assignments and textbooks from previous classes. I found this project relevant to computer science and information systems for several reasons, such as the AI component and use of SQL data tables; but it was …

Implementing A Registry Federation For Materials Science Data Discovery, Raymond L. Plante, Chandler A. Becker, Andrea Medina-Smith, Kevin Brady, Alden Dima, Benjamin Long, Laura M. Bartolo, James A. Warren, Robert J. Hanisch

Copyright, Fair Use, Scholarly Communication, etc.

As a result of a number of national initiatives, we are seeing rapid growth in the data important to materials science that are available over the web. Consequently, it is becoming increasingly difficult for researchers to learn what data are available and how to access them. To address this problem, the Research Data Alliance (RDA) Working Group for International Materials Science Registries (IMRR) was established to bring together materials science and information technology experts to develop an international federation of registries that can be used for global discovery of data resources for materials science. A resource registry collects high-level metadata …

Predicting The Outcome Of Nba Games, Matthew Houde

Honors Projects in Data Science

The aim of the project is to create a machine learning model to predict NBA games. The purpose is to build upon and improve existing models. Research into other predictive sports models and machine learning techniques was conducted to understand what is currently being done to predict NBA games and how effective it is in doing so. After a thorough literary review, the model was created using Python and a variety of machine learning techniques. The dataset used had an array of team statistics for both the home and away team for each corresponding matchup and two supporting features were …

Data-Limited Domain Adaptation And Transfer Learning For Learning Latent Expression Labels Of Child Facial Expression Images, Megan Witherow, Winston Shields, Manar Samad, Khan Iftekharuddin

College of Engineering & Technology (Batten) Posters

While state-of-the-art deep learning models have demonstrated success in adult facial expression classification by leveraging large, labeled datasets, labeled data for child facial expression classification is limited. Due to differences in facial morphology and development in child and adult faces, deep learning models trained on adult data do not generalize well to child data. Recent deep domain adaptation approaches have improved the generalizability of models trained on a source domain to a target domain with few labeled samples. We propose that incorporating steps of deep transfer learning, e.g. weights initialization from the pre-trained source model and freezing model layers, may …

The Role Of Privacy Within The Realm Of Healthcare Wearables' Acceptance And Use, Thomas Jernejcic

Masters Theses & Doctoral Dissertations

The flexibility and vitality of the Internet along with technological innovation have fueled an industry focused on the design of portable devices capable of supporting personal activities and wellbeing. These compute devices, known as wearables, are unique from other computers in that they are portable, specific in function, and worn or carried by the user. While there are definite benefits attributable to wearables, there are also notable risks, especially in the realm of security where personal information and/or activities are often accessible to third parties. In addition, protecting one’s private information is regularly an afterthought and thus lacking in maturity. …

Public Discourse Against Masks In The Covid-19 Era: Infodemiology Study Of Twitter Data, Mohammad A. Al-Ramahi, Ahmed El Noshokaty, Omar El-Gayar, Tareq Nasralah, Abdullah Wahbeh

Computer Information Systems Faculty Publications (Archived)

Background:

Despite scientific evidence supporting the importance of wearing masks to curtail the spread of COVID-19, wearing masks has stirred up a significant debate particularly on social media.

Objective:

This study aimed to investigate the topics associated with the public discourse against wearing masks in the United States. We also studied the relationship between the anti-mask discourse on social media and the number of new COVID-19 cases.

Methods:

We collected a total of 51,170 English tweets between January 1, 2020, and October 27, 2020, by searching for hashtags against wearing masks. We used machine learning techniques to analyze the data …

Interrupting The Propaganda Supply Chain, Kyle Hamilton, Bojan Bozic, Luc Longo

Conference papers

In this early-stage research, a multidisciplinary approach is presented for the detection of propaganda in the media, and for modeling the spread of propaganda and disinformation using semantic web and graph theory. An ontology will be designed which has the theoretical underpinnings from multiple disciplines including the social sciences and epidemiology. An additional objective of this work is to automate triple extraction from unstructured text which surpasses the state-of-the-art performance.

An Analysis Of The Interpretability Of Neural Networks Trained On Magnetic Resonance Imaging For Stroke Outcome Prediction, Esra Zihni, John D. Kelleher, Bryony Mcgarry

Conference papers

Applying deep learning models to MRI scans of acute stroke patients to extract features that are indicative of short-term outcome could assist a clinician’s treatment decisions. Deep learning models are usually accurate but are not easily interpretable. Here, we trained a convolutional neural network on ADC maps from hyperacute ischaemic stroke patients for prediction of short-term functional outcome and used an interpretability technique to highlight regions in the ADC maps that were most important in the prediction of a bad outcome. Although highly accurate, the model’s predictions were not based on aspects of the ADC maps related to stroke pathophysiology.

Sentiment-Oriented Metric Learning For Text-To-Image Retrieval, Quoc Tuan Truong, Hady W. Lauw

Research Collection School Of Computing and Information Systems

In this era of multimedia Web, text-to-image retrieval is a critical function of search engines and visually-oriented online platforms. Traditionally, the task primarily deals with matching a text query with the most relevant images available in the corpus. To an increasing extent, the Web also features visual expressions of preferences, imbuing images with sentiments that express those preferences. Cases in point include photos in online reviews as well as social media. In this work, we study the effects of sentiment information on text-to-image retrieval. Particularly, we present two approaches for incorporating sentiment orientation into metric learning for cross-modal retrieval. Each …

Network-Based Analysis Of Early Pandemic Mitigation Strategies: Solutions, And Future Directions, Pegah Hozhabrierdi, Raymond Zhu, Maduakolam Onyewu, Sucheta Soundarajan

Northeast Journal of Complex Systems (NEJCS)

Despite the large amount of literature on mitigation strategies for pandemic spread, in practice, we are still limited by naive strategies, such as lockdowns, that are not effective in controlling the spread of the disease in long term. One major reason behind adopting basic strategies in real-world settings is that, in the early stages of a pandemic, we lack knowledge of the behavior of a disease, and so cannot tailor a more sophisticated response. In this study, we design different mitigation strategies for early stages of a pandemic and perform a comprehensive analysis among them. We then propose a novel …

The Impact Of Twitter On The National Hockey League And Its Players, Benjamin Strauss

Honors Projects in Data Science

This study offers a new perspective on collecting and analyzing Twitter data surrounding the National Hockey League (NHL) to identify any trends or relationships between the data and overall performance during the 2021 abbreviated season. This paper provides and in-depth analysis by studying a sample of sixty of the top NHL players, specifically those who are typically top performers in the league, spanning over all thirty-one teams and all positions, this study was able to identify a deeper and broader perspective of what implications can be drawn from analyzing data from Twitter to both predict and reflect both individual player …

Mass Incarceration In Nebraska: Data And Historical Analysis Of Inmates From 1980-2020, Anna Krause

Honors Program: Senior Projects (Public)

This study examines Nebraska Department of Corrections inmate data from 1980-2020, looking specifically at inmate demographics and offense trends. State-of-the-art data analysis is conducted to collect, modify, and visualize the data sources. Inmates are organized by each decade they were incarcerated within. The current active prison population is also examined in their own research group. The demographic and offense trends are compared with previous local and national research. Historical context is given for evolving trends in offenses. Solutions for Nebraska prison overcrowding are presented from various interest groups. This study aims to enlighten all interested Nebraskans on who inhabits their …

A Consent Framework For The Internet Of Things In The Gdpr Era, Gerald Chikukwa

Masters Theses & Doctoral Dissertations

The Internet of Things (IoT) is an environment of connected physical devices and objects that communicate amongst themselves over the internet. The IoT is based on the notion of always-connected customers, which allows businesses to collect large volumes of customer data to give them a competitive edge. Most of the data collected by these IoT devices include personal information, preferences, and behaviors. However, constant connectivity and sharing of data create security and privacy concerns. Laws and regulations like the General Data Protection Regulation (GDPR) of 2016 ensure that customers are protected by providing privacy and security guidelines to businesses. Data …

Jrevealpeg: A Semi-Blind Jpeg Steganalysis Tool Targeting Current Open-Source Embedding Programs, Charles A. Badami

Masters Theses & Doctoral Dissertations

Steganography in computer science refers to the hiding of messages or data within other messages or data; the detection of these hidden messages is called steganalysis. Digital steganography can be used to hide any type of file or data, including text, images, audio, and video inside other text, image, audio, or video data. While steganography can be used to legitimately hide data for non-malicious purposes, it is also frequently used in a malicious manner. This paper proposes JRevealPEG, a software tool written in Python that will aid in the detection of steganography in JPEG images with respect to identifying a …

Bilateral Variational Autoencoder For Collaborative Filtering, Quoc Tuan Truong, Aghiles Salah, Hady W. Lauw

Research Collection School Of Computing and Information Systems

Preference data is a form of dyadic data, with measurements associated with pairs of elements arising from two discrete sets of objects. These are users and items, as well as their interactions, e.g., ratings. We are interested in learning representations for both sets of objects, i.e., users and items, to predict unknown pairwise interactions. Motivated by the recent successes of deep latent variable models, we propose Bilateral Variational Autoencoder (BiVAE), which arises from a combination of a generative model of dyadic data with two inference models, user- and item-based, parameterized by neural networks. Interestingly, our model can take the form …

Node Classification On Relational Graphs Using Deep-Rgcns, Nagasai Chandra

Master's Theses

Knowledge Graphs are fascinating concepts in machine learning as they can hold usefully structured information in the form of entities and their relations. Despite the valuable applications of such graphs, most knowledge bases remain incomplete. This missing information harms downstream applications such as information retrieval and opens a window for research in statistical relational learning tasks such as node classification and link prediction. This work proposes a deep learning framework based on existing relational convolutional (R-GCN) layers to learn on highly multi-relational data characteristic of realistic knowledge graphs for node property classification tasks. We propose a deep and improved variant, …

Clustering Web Users By Mouse Movement To Detect Bots And Botnet Attacks, Justin L. Morgan

Master's Theses

The need for website administrators to efficiently and accurately detect the presence of web bots has shown to be a challenging problem. As the sophistication of modern web bots increases, specifically their ability to more closely mimic the behavior of humans, web bot detection schemes are more quickly becoming obsolete by failing to maintain effectiveness. Though machine learning-based detection schemes have been a successful approach to recent implementations, web bots are able to apply similar machine learning tactics to mimic human users, thus bypassing such detection schemes. This work seeks to address the issue of machine learning based bots bypassing …