Computer Sciences Commons^™

Survey: A Study On Image Encryption Using Dna In Bioinformatics, Rana M. Zaki, Zaed S. Mahdi, Matheel E. Abdulmunim

Journal of Soft Computing and Computer Applications

One area of study between computer science and biology is bioinformatics, which deals with methods for collecting, processing, storing, and evaluating biological data. Sequences of RiboNucleic Acid (RNA), DeoxyriboNucleic Acid (DNA), and proteins make up biological data, which has a wide range of uses in domains such as feature extraction, data segmentation, data security, and more. In cryptography, DNA sequences are used as data carriers, enhancing the unique properties of biomolecules. This approach involves using DNA sequences to enhance the security of confidential data that must be transmitted over networks or stored securely. Several DNA-based security techniques have been developed, …

New Feature Selection Using Principal Component Analysis, Zaid Mundher Radeef, Soukaena Hassan Hashem, Ekhlas Khalaf Gbashi

Journal of Soft Computing and Computer Applications

Dimensionality reduction techniques streamline machine learning by reducing data complexity, improving model accuracy, and cutting computational costs. They remove noise and irrelevant features, making models faster and more efficient. These techniques also enhance data visualization and interpretation by condensing data into manageable, insightful dimensions. Ultimately, dimensionality reduction leads to simpler, more interpretable models without sacrificing critical information, making it a cornerstone of efficient data analysis and machine learning applications. Theoretically, feature extraction tends to create new features that encapsulate more information by combining multiple existing features, resulting in more concentrated and informative features. In contrast, feature selection involves choosing a …

Development Of A Hybrid Methodology Of Deep Learning And Machine Learning For Lung Nodule Detection In Medical Computed Tomography Images, Zaed S. Mahdi, Rana M. Zaki, Alaa Kadhim Farhan, Negar Majma

Journal of Soft Computing and Computer Applications

Deep learning and machine learning play an important role in the medical field, helping doctors make accurate, fast and effective diagnosis. Despite the progress achieved in the use of modern technologies in detecting cancerous nodes, current studies still suffer from some challenges and limitations that must be addressed to obtain high efficiency in identifying cancerous nodes. These challenges include using image pre-processing, combining deep learning and machine learning techniques, and constantly adapting to clinical changes, in order to address this. A hybrid methodology has been proposed for detecting cancerous nodules in the lung in medical Computed Tomography (CT) images. It …

Enhancing Image Classification Using A Convolutional Neural Network Model, Zena M. Saadi, Ahmed T. Sadiq, Omar Z. Akif, Marwa M. Eid

Journal of Soft Computing and Computer Applications

In recent years, with the rapid development of the current classification system in digital content identification, automatic classification of images has become the most challenging task in the field of computer vision. As can be seen, vision is quite challenging for a system to automatically understand and analyze images, as compared to the vision of humans. Some research papers have been done to address the issue in the low-level current classification system, but the output was restricted only to basic image features. However, similarly, the approaches fail to accurately classify images. For the results expected in this field, such as …

Improved Rapidly-Exploring Random Tree Using Firefly Algorithm For Robot Path Planning, Dena Kadhim Muhsen, Firas Abdulrazzaq Raheem, Yuhanis Yusof, Ahmed T. Sadiq, Faiz Al Alawy

Journal of Soft Computing and Computer Applications

In robotics, efficient path planning makes robots work independently and move through changing environments over time. This study combines the Rapidly-exploring Random Tree (RRT) architecture with the Firefly Algorithm (FA) to make robot’s path-planning better. The proposed ERRT-FA, which stands for "Enhanced RRT with Firefly Algorithm", generates better routes using Firefly social habits. Plan routes using Firefly social habits can effectively aid in exploring configuration space. The role of the FA is to enhance the RRT algorithm by providing an optimized exploration of the search space, ultimately leading to optimizing the path found by the RRT algorithm and better paths …

Pushing The Boundaries Of Large Language Models: Innovations And Limitations In Nlp, Finance, And Mathematics, A M Muntasir Rahman

Dissertations

Large Language Models (LLMs) have emerged as transformative tools across a spectrum of domains, yet their practical deployment reveals a blend of remarkable potential and notable limitations. This research explores innovative methodologies to extend the capabilities of LLMs while addressing critical challenges in their evaluation and application. By leveraging rule-based approaches, the in-context learning capabilities of LLMs, and human-in-the-loop validation across three focused studies, this research introduces robust strategies for dataset synthesis, model enhancement, and model assessment in three distinct domains: natural language processing, financial sentiment analysis, and mathematical reasoning

The first study proposes an efficient data augmentation framework, EASE, …

First-Principles Study Of Ferroelectric Properties And Co2 Reduction Reaction Capabilities In Two-Dimensional Monolayers And Heterostructures, Mo Li

Dissertations

Two-dimensional (2D) materials hold significant potential for CO₂ reduction reactions (CO₂RR) due to their high surface-to-volume ratio. However, achieving high selectivity for desired products and overcoming limitations posed by scaling relationships remain challenging. Recent studies suggest that ferroelectric (FE) materials with switchable out-of-plane polarization (OOP) can effectively tune the adsorption behavior, thermodynamics, and kinetics of CO₂RR, offering promising solutions to these challenges. Using density functional theory (DFT) and the Berry phase approach, this work expands the family of 2D ferroelectrics by theoretically identifying Y₂CO₂, Y₂CS₂, and Sc …

Ensemble Learning Models For Large-Scale Time Series Forecasting In Supply Chain, Minjuan Zhang

Dissertations

Machine learning and AI techniques are transforming supply chain forecasting, driven by the expanding availability of data assets. These advanced methods offer powerful opportunities to optimize management processes, reduce operational costs, and enhance strategic decision-making, which is crucial for enterprise success. However, conventional statistical approaches, such as Autoregressive Integrated Moving Average Models (ARIMA), dynamic regression, and Unobserved Component Models (UCMs)—which have long dominated time series forecasting—often fall short in accuracy and scalability. These traditional models face limitations in batch processing, handling large-scale data, addressing uncertainty-induced disruptions, and synchronizing demand-supply scenarios.

To address these challenges, a novel class of AI-powered ensemble …

Machine Learning Methods For Pattern Recognition Analysis Of Genomic And Molecular Data, Kuang Du

Dissertations

While immune therapies achieve remarkable success in treating various cancers, only a subset of patients achieves a durable clinical response, and many exhibit innate or acquired resistance. Precision medicine aims to tailor treatments to individual patients based on specific biological markers, ensuring that each patient receives the therapy most likely to be effective. Predictive biomarkers and gene signatures offer potential for more personalized treatment strategies by identifying patients likely to benefit. Recent studies suggest that gene signatures, comprising sets of genes, hold predictive value for certain clinical variables. Typically derived from biological expert knowledge, these signatures demonstrate substantial predictive potential, …

Knowledge Diffusion In Networks Of Artificial Learners, Ehsan Beikihassan

Dissertations

The dissertation draws inspiration from the topic of peer learning in the social sciences and the study of information dissemination and knowledge diffusion in network science. In particular, it introduces and studies a setting involving a population or network of artificial learners, with the objective of optimizing aggregate performance measures under constraints on training resources. In this context, natural knowledge diffusion processes in networks of interacting artificial learners are studied. The term "natural" refers to processes that emulate human peer learning, where the internal state and learning processes of students remain largely opaque, and the main degree of freedom lies …

Interactive Visualization Workflows For Mitigating Analytical Uncertainty, Kaustav Bhattacharjee

Dissertations

This dissertation takes a process-centric and stakeholder-first perspective for handling analytical uncertainty: the form of uncertainty that confronts data analysts' insight-generation processes in high-consequence decision-making scenarios. The cost of an incorrect decision when data is used for movie recommendations as opposed to when personal data is used to drive insights or when data-driven modeling is used to drive real-time decisions for maintaining the health of a grid are vastly different in terms of consequences. This dissertation looks at analytical uncertainty in two real-world scenarios: i) how sensitive information leakage can be prevented during the open data release process with data …

Crowd-Sourced Learning For Computer Graphics Applications, Yunhao Zhang

Dissertations

Computer Graphics (CG) revolves around virtual content creation using computational methods, spanning applications from games to visual effects. Typically, the creation of CG content is led by expert practitioners who guide computational algorithms towards satisfactory results. Thus, creating CG content often requires manual iterations encompassing algorithm design, parameter tuning, and aesthetic feedback. This work investigates how to leverage crowd-sourcing to streamline such creation processes, focusing on animation and simulation. In animation, a novel crowd-sourcing framework is proposed for combat animation, enabling users to analyze motion similarities, and retrieve matching motions using novel crowd-sourced motion features. Such features enable quantifying previously …

Shalom In Social Media Marketing Shalom In Social Media Marketing, Jill R. Risner, Thomas Betts

University Faculty Publications and Creative Works

This paper will examine social media and the ways in which it currently does and does not contribute to shalom through an examination of both the platforms themselves as well as the content shared through them. As Christ’s ambassadors in the world and the primary funders of social media, marketers have power and an obligation to consider social media’s impact on shalom in the world and to use it in ways that contribute to shalom. This paper will provide several recommendations of how marketers can do this including posting content that intentionally contributes to shalom, engaging on platforms that support …

Surveying The Role Of Visual Analytics In Human-Machine Teaming, Naga Datha Saikiran Battula

Theses

Humans and machines both possess their unique capabilities and have their strengths and weaknesses, which can be complementary to one another and allow them to achieve a common goal. Teaming in the modern era involves text prompts, voice commands, gesture recognition, touch interfaces, and the latest visualization techniques that allow parties/agents to interact. Communication through visualization plays a vital role in allowing robust insights to be gained through a glance. Using visualization as a medium between humans and machines can increase the communication bandwidth. Human-machine teaming has witnessed much progress, with many theories and practical examples emerging. In the report, …

Automated Segmentation Of The Ulnar Nerve In Mri Using Deep Learning Techniques, Akhil Nagulapalli

Theses

Cubital Tunnel Syndrome (CuTS), a condition caused by compression of the ulnar nerve, results in numbness, tingling, pain, and even muscle atrophy, affecting fine motor skills and diminishing patient quality of life. Accurate diagnosis of CuTS is challenging, as current diagnostic methods—including clinical exams, nerve conduction studies, and unaided MRI—often lack the precision to reliably identify the nerve and detect compression in its early stages. Deep learning-based segmentation offers a promising solution, enabling precise and automated identification of nerve structures in MRI images, which could significantly improve diagnostic accuracy and support timely intervention.

A novel deep learning model for segmenting …

Ai-Assisted Academia: Unveiling Doctoral Students' Perspectives On Dissertation In Practice Innovation, Jennifer J. Lesh, Jévaughn J. Lancaster

Faculty and Staff Publications & Presentations

This action research study explores 73 doctoral students' perceptions of using Generative Artificial Intelligence (GAI) throughout their research journey in one educational doctorate (Ed.D) program. The first phase employed surveys, while the second incorporated semi-structured focus group interviews based on the survey data from a diverse sample of students across educational disciplines currently enrolled in the university's educational leadership doctoral program. In the study's first phase, the survey quantified educators' familiarity with, attitudes towards, perceived challenges, ethical considerations, and benefits of using GAI in doctoral research. The exploration of GAI in this practitioner-inspired doctoral program has uncovered essential insights into …

Impact Of Urban Development On Uv Exposure: A Clustering And Machine Learning Assessment, Taufik Roni Sahroni Mr., Verdi Yasin, Lulut Alfaris, Reza Ariefka, Ruben Cornelius Siagian, Mohammad Alfin Karim, Nana Rahdiana, Ade Suhara

Journal of Environmental Science and Sustainable Development

The relocation of Indonesia's capital city is anticipated to promote inclusive economic growth while embracing cultural diversity. However, this transition may affect ultraviolet (UV) radiation exposure patterns. The study investigated variations in UV exposure in the IKN region, focusing on urban development factors such as land use and population density that affect public health, sun protection, and skin cancer prevention. The research hypothesized that UV radiation is significantly correlated with these factors. UV Index data from 2010-2023, a hierarchical clustering method, identifies complex data patterns without determining the number of clusters. XGBoost, a machine learning model, was used for handling …

Cropsync: Ai-Powered Sustainable Crop Management, Ziad Doughan, Ibrahim Mneimneh, Zouheir Nakouzi, Noor Al Khaib, Samer Damaj, Jamal Chaaban, Hamza Mrad, Sari Itani

BAU Journal - Science and Technology

CropSync is a smart agriculture system that uses AI and IoT technologies to enable sustain- able crop management and precision farming. The system aims to address the challenges faced by the agriculture sector, such as increasing food production to meet global population demands while minimizing environmental impact. CropSync integrates sensors, cameras, and cloud-based analytics to provide farmers with real-time insights and recommendations for optimizing crop cul- tivation. The system upholds engineering professional and ethical standards, considering broader social, environmental, and economic implications. From a social perspective, CropSync improves food security and enhances farmers’ livelihoods through increased productivity and efficient re- …

Optimizing Vgg16 Deep Learning Model With Enhanced Hunger Games Search For Logo Classification, Mohammed Hussain, Thaer Thaher, Mohamed Basel Almourad, Majdi Mafarja

All Works

Accurate classification of logos is a challenging task in image recognition due to variations in logo size, orientation, and background complexity. Deep learning models, such as VGG16, have demonstrated promising results in handling such tasks. However, their performance is highly dependent on optimal hyperparameter settings, whose fine-tuning is both labor-intensive and time-consuming. Swarm intelligence algorithms have been widely adopted to solve many highly nonlinear, multimodal problems and have succeeded significantly. The Hunger Games Search (HGS) is a recent swarm intelligence algorithm that has shown good performance across various applications. However, the standard HGS still faces limitations, such as restricted population …

Text-To-Text Generative Approach For Enhanced Complex Word Identification, Patrycja Śliwiak, Syed Afaq Ali Shah

Research outputs 2022 to 2026

This paper presents a novel approach for solving the Complex Word Identification (CWI) task using the text-to-text generative model. The CWI task involves identifying complex words in text, which is a challenging Natural Language Processing task. To our knowledge, it is a first attempt to address CWI problem into text-to-text context. In this work, we propose a new methodology that leverages the power of the Transformer model to evaluate complexity of words in binary and probabilistic settings. We also propose a novel CWI dataset, which consists of 62,200 phrases, both complex and simple. We train and fine-tune our proposed model …

Agfi-Gan: An Attention-Guided And Feature-Integrated Watermarking Model Based On Generative Adversarial Network Framework For Secure And Auditable Medical Imaging Application, Xinyun Liu, Ronghua Xu, Chen Zhao

Michigan Tech Publications

With the rapid digitization of healthcare, the secure transmission of medical images has become a critical concern, especially given the increasing prevalence of cyber threats and data privacy breaches. Medical images are frequently transmitted via the Internet and cloud platforms, making them susceptible to unauthorized access, tampering, and theft. While traditional cryptographic techniques play a vital role, they are often insufficient to fully ensure the integrity and confidentiality of these sensitive images. In this paper, we present AGFI-GAN, a robust and secure framework for medical image watermarking that leverages attention-guided and Feature-Integrated mechanisms within a Generative Adversarial Network (GAN). Specifically, …

Muramyl Peptide Blend Ameliorates Intestinal Inflammation And Barrier Integrity In Caco-2 Cells, Dmytro M. Masiuk, Victor S. Nedzvetsky, Giyasettin Baydas

Karbala International Journal of Modern Science

Intestinal barrier function depends on epithelial adhesion, which restricts permeability and microbial invasion from the internal environment. Impairment of barrier integrity and gut function is closely linked to pro-inflammatory changes. Inflammation is often the primary factor that provokes gut function disorders. The anti-inflammatory potential of postbiotics has been reported in recent years. Muramyl peptides (MPs) are small signaling molecules that stimulate intracellular pathogen receptors and can regulate cell responses. However, the molecular mechanisms of MPs' effects on intestinal cells remain unknown. The study of MPs treatment on lipopolysaccharide (LPS)-challenged Caco-2 intestinal cells aimed to investigate the postbiotic effects on intestinal …

Explainable Artifacts For Synthetic Western Blot Source Attribution, João Phillipe Cardenuto, Sara Mandelli, Daniel Moreira, Paolo Bestagini, Edward J. Delp, Anderson Rocha

Computer Science: Faculty Publications and Other Works

Recent advancements in artificial intelligence have enabled generative models to produce synthetic scientific images that are indistinguishable from pristine ones, posing a challenge even for expert scientists habituated to working with such content. When exploited by organizations known as paper mills, which systematically generate fraudulent articles, these technologies can significantly contribute to the spread of misinformation about ungrounded science, potentially undermining trust in scientific research. While previous studies have explored black-box solutions, such as Convolutional Neural Networks, for identifying synthetic content, only some have addressed the challenge of generalizing across different models and providing insight into the artifacts in synthetic …

Localization Of Synthetic Manipulations In Western Blot Images, Anmol Manjunath, Viola Negroni, Sara Mandelli, Daniel Moreira, Paolo Bestagini

Computer Science: Faculty Publications and Other Works

Recent breakthroughs in deep learning and generative systems have significantly fostered the creation of synthetic media, as well as the local alteration of real content via the insertion of highly realistic synthetic manipulations. Local image manipulation, in particular, poses serious challenges to the integrity of digital content and societal trust. This problem is not only confined to multimedia data, but also extends to biological images included in scientific publications, like images depicting Western blots. In this work, we address the task of localizing synthetic manipulations in Western blot images. To discriminate between pristine and synthetic pixels of an analyzed image, …

Artificial Intelligence In Fetal And Pediatric Echocardiography, Alan Wang, Tam T Doan, Charitha Reddy, Pei-Ni Jone

Faculty, Staff and Students Publications

Echocardiography is the main modality in diagnosing acquired and congenital heart disease (CHD) in fetal and pediatric patients. However, operator variability, complex image interpretation, and lack of experienced sonographers and cardiologists in certain regions are the main limitations existing in fetal and pediatric echocardiography. Advances in artificial intelligence (AI), including machine learning (ML) and deep learning (DL), offer significant potential to overcome these challenges by automating image acquisition, image segmentation, CHD detection, and measurements. Despite these promising advancements, challenges such as small number of datasets, algorithm transparency, physician comfort with AI, and accessibility must be addressed to fully integrate AI …

Digital Twin And Cybersecurity In Additive Manufacturing, Lidong Wang

Journal of Cybersecurity Education, Research and Practice

Additive manufacturing (AM) has been applied to automotive, aerospace, medical sectors, etc., but there are still challenges such as parts’ porosity, cracks, surface roughness, intrinsic anisotropy, and residual stress because of the high level of thermal gradient. It is significant to conduct the modeling and simulation of the AM process and achieve quality products. Digital Twin (DT) can help AM with forecasting defects/errors through simulation and real-time process monitoring. DT is a concept of Industry 4.0, and its digital structure reflects the real-time behaviors of a cyber-physical or physical system. This paper introduces the progress of DT applications in AM, …

Measurement Of Breast Artery Calcification Using An Artificial Intelligence Detection Model And Its Association With Major Adverse Cardiovascular Events, Suzanne Rose, Josette Hartnett, Zachary Estep, Daniyal Ameen, Shweta Karki, Edward Schuster, Rebecca Newman, David Hsi

Department of Medicine Faculty Papers

Breast artery calcification (BAC) obtained from standard mammographic images is currently under evaluation to stratify risk of major adverse cardiovascular events in women. Measuring BAC using artificial intelligence (AI) technology, we aimed to determine the relationship between BAC and coronary artery calcification (CAC) severity with Major Adverse Cardiac Events (MACE). This retrospective study included women who underwent chest computed tomography (CT) within one year of mammography. T-test assessed the associations between MACE and variables of interest (BAC versus MACE, CAC versus MACE). Risk differences were calculated to capture the difference in observed risk and reference groups. Chi-square tests and/or Fisher's …

Editorial: Artificial Intelligence For Smart Health: Learning, Simulation, And Optimization, Bing Yao, Nathan Gaw, Hyo Kyung Lee

Faculty Publications

With rapid developments in medical sensing and imaging, we now live in an era of data explosion in which large amounts of data are readily available in clinical environments. The fast-growing biomedical and healthcare data provide unprecedented opportunities for data-driven scientific knowledge discovery and clinical decision support. Our Research Topic aims to catalyze synergies among biomedical informatics, machine learning, computer simulation, operations research, systems engineering, and other related fields with three specific goals: (1) develop cutting-edge data-driven models to accelerate scientific knowledge discovery in biomedicine using healthcare data collected from laboratory systems, imaging systems, and medical and sensing devices; (2) …

Coding For Decentralized Systems And Forensic 3d Fingerprinting, Canran Wang

McKelvey School of Engineering Graduate Student Theses & Dissertations

This dissertation presents novel coding techniques that optimize communication costs and address security challenges in decentralized systems and 3D printing technologies. The first part focuses on encoding data in distributed systems in a decentralized manner, i.e., without a central processor which orchestrates the operation. In such systems, processors require coded data generated from inputs provided by source processors. An example is a distributed storage system with geographically dispersed nodes storing a large database collected by specific source processors. To reduce communication costs, we propose a universal solution applicable to any linear code, with optimizations for systematic Reed-Solomon and Lagrange codes, …

Ethical Aspects Of Utilising Artificial Intelligence In Clinical Settings, Jeffrey Byrnes, Michael Robinson

Philosophy Faculty Articles and Research

In response to recent proposals to utilize artificial intelligence (AI) to automate ethics consultations in healthcare, we raise two main problems for the prospect of having healthcare professionals rely on AI-driven programs to provide ethical guidance in clinical matters. The first cause for concern is that, because these programs would effectively function like black boxes, this approach seems to preclude the kind of transparency that would allow clinical staff to explain and justify treatment decisions to patients, fellow caregivers, and those tasked with providing oversight. The other main problem is that the kind of authority that would need to be …