Physical Sciences and Mathematics Commons^™

Cybersecurity Center For Offshore Wind Energy (Final Project Round), Sachin Shetty

Center for Secure and Intelligent Critical Systems (CSICS) Publications

This project establishes a Cybersecurity Center for Offshore Wind Energy with the objective of designing and operating a cyber-physical testbed for wind energy farms (WEFs) that enables comprehensive cybersecurity research. The testbed incorporates a Supervisory Control and Data Acquisition (SCADA) system connected to turbine models via industrial-grade programmable logic controllers (PLCs) and remote terminal units (RTUs). It supports side-channel data acquisition, implementation and analysis of various cyberattack scenarios, and development of attack detection, mitigation, and best-practice guidance tailored to wind energy systems. During the project, the team expanded the number and fidelity of mathematical turbine models (MTMs), integrated these models …

Automation And Autonomy In The Ivf Laboratory: Concepts And Implications For Embryologists, Jacques Cohen, Gerardo Mendizabal-Ruiz, Giles Anthony Palmer, Giuseppe Silvestri, Mina Alikani

EVMS School of Health Professions Faculty Publications

Automation is regarded as the next phase in the evolution of laboratory IVF. Despite technological advances, most laboratory procedures remain operator-dependent, contributing to variability in performance and outcomes. While automation has improved reproducibility and efficiency in many areas of medicine, its adoption in IVF has been slow. This review examines how automation may be integrated into IVF laboratories through a set of conceptual distinctions. Automation refers to the execution of procedural steps by machine-controlled systems, whereas autonomy describes the degree to which such systems can operate without human intervention. This review distinguishes between static automation, which maintains or monitors the …

Training Set Augmentation And Biology-Aware Harmonization Improve Radiomic Models For Lung Cancer Prediction In Indeterminate Nodules, Claire Huchthausen, Menglin Shi, Gabriel De Sousa, James Larner, Einsley Janowski, Jonathan Colen, Krishni Wijesooriya

Data Science Faculty Publications

CT radiomics-based machine learning has potential to predict lung cancer in pulmonary nodules (PNs) earlier than standard-of-care methods. Low malignancy rates in early-development PNs and variable image acquisition hinder development of radiomic models for diagnosing these PNs. To address these challenges, we augmented training using later-development PNs and harmonized for acquisition effects. We examine early-development benign and malignant PNs (n = 106) below the sensitivity of standard-of-care diagnosis. Classifiers predicting malignancy performed near chance when trained on ComBat-harmonized radiomic features from only early-development PNs. We then augmented training with later-development benign and malignant PNs (n = 225). We evaluated whether …

Applied Machine Learning In Mineral Prospectivity Mapping In The South Pass-Granite Mountains Of Wyoming, Carl D. York

Graduate Theses/Dissertations

The South Pass-Granite Mountains, comprised of Archean to Tertiary rocks embedded with an Archean greenstone belt in Central Wyoming, have historically been mined for gold, iron, steel, and silver. Rare earth elements have been of increasing interest in the region and thus, several datasets have become available. Knowledge driven and data driven models are used in mineral prospectivity mapping with input data including geological mapping, geochemical data, geophysical (USGS Critical Mineral magnetic and gravity data), radiometric (U, Th, K) data and multispectral remote sensing data. Mineral prospectivity has seen a rapid improvement in recent years using advancements in machine learning …

An Integrated Data-Driven Framework For Arctic Shipping: Analyzing Vessel Speed, Environmental And Ecological Factors Through Innovative Statistical Spatio-Temporal Methods, Inverse Optimization And Machine Learning, Mauli Pant

Theses and Dissertations

This dissertation develops an integrated data-driven framework to analyze vessel navigation and ecological risk in the United States Arctic from 2010 to 2019. As environmental change and maritime activity increase in the region, understanding how vessels respond to dynamic conditions and how those responses interact with marine ecosystems has become increasingly important. A central theme of this dissertation is the treatment of vessel speed as both an observed outcome and a decision variable reflecting trade- offs among operational, environmental, and ecological factors. The first chapter develops a predictive framework for vessel speed over ground (SOG) using Gaussian Process Boosting (GPBoost), …

Untrained Position-Encoded Multilayer Perceptron Network For Structured Illumination Microscopy Reconstruction, Sahil Sharma, Leonidas Zimianitis, Krishnendu Samanta, Balpreet Singh Ahluwalia, Joby Joseph, Dushan N. Wadduwage

Computer Science Faculty Publications

Structured Illumination Microscopy (SIM) enables super-resolution imaging by encoding high-frequency spatial information through patterned light. While traditional Fourier-based reconstruction methods are prone to artifacts under suboptimal conditions, recent deep learning approaches often require large training datasets and lack adaptability across different imaging setups. In this work, we present Position Encoded Multi-Layer Perceptron (PEM) network that leverages implicit neural representations (INRs) and SIM forward-model-driven modeling to reconstruct super-resolved images without any training data. PEM-SIM represents each spatial coordinate as a combination of sinusoidal functions across multiple frequencies, enabling rich encoding of fine spatial detail. A forward model grounded in SIM image …

Efficient Dynamic And Momentum Aperture Optimization For Lattice Design Using Multipoint Bayesian Algorithm Execution, Z. Zhang, I. Agapov, S. Gasiorowski, T. Hellert, W. Neiswanger, X. Huang, D. Ratner

Physics Faculty Publications

We demonstrate that multipoint Bayesian algorithm execution (multipointBAX) can overcome fundamental computational challenges in storage ring design optimization. Dynamic aperture and momentum aperture optimization is a multipoint, multiobjective design task for storage rings, ultimately informing the flux of x-ray sources and luminosity of colliders. Current production black-box optimization methods require extensive particle-tracking simulations for each trial configuration; the high computational cost restricts the extent of the search to ~ 10³ configurations and therefore limits the quality of the final design. We remove this bottleneck using multipointBAX, which selects, simulates, and models each trial configuration at the single-particle level. We demonstrate …

Towards Acoustic Bioindicator Integration In Ai-Based Wildfire Monitoring: A Systematic Review, Sabah Mustafa, Mahsa Mohaghegh, Iman Ardekani, Abdolhossein Sarrafzadeh

Electrical & Computer Engineering Faculty Publications

Wildfires are becoming more frequent, severe, and long-lasting, driving rapid growth in sensor-based and artificial intelligence (AI)-enabled systems for early detection and risk assessment. This article presents a systematic literature review, based on 169 studies screened from 7511 records, of wildfire monitoring approaches using satellite and aerial remote sensing, fixed cameras, wireless sensor networks, and Internet of Things (IoT) platforms combined with machine learning (ML) and deep learning (DL) models for ignition detection, fire-weather indices, spread prediction, and burned-area mapping. The review organizes existing work by sensing modality, spatial and temporal scale, learning task, model type, and deployment architecture, and …

A Hybrid Response Surface Methodology And Machine Learning Framework For Quantifying Effects Of Physicochemical Parameters On Pfas Distribution, Harsh V. Patel, Jazmin Green, Hyoshin Park, Stephanie Luster-Teasley Pass, Renzun Zhao

Engineering Management & Systems Engineering Faculty Publications

Predicting PFAS adsorption across diverse adsorbents and environmental matrices remains challenging because adsorbent physicochemical properties, PFAS molecular descriptors, and operational conditions simultaneously influence adsorption. This study develops and evaluates a unified hybrid modeling framework that integrates Response Surface Model (RSM) with machine-learning algorithms to quantify how six key variables, surface area, Log K_ow, pH_pzc, pK_a, log dose, and log-initial concentration, affect PFAS distribution coefficients (Log K_d). A data set of more than 1000 adsorption observations spanning 15 PFAS compounds, multiple adsorbent types, and a broad operational range was compiled and preprocessed using …

Artificial Intelligence And Machine Learning In Smart Vaginal Formulation Development, Deborah A. Ogundemuren, Vivek Agrahari, Andrew P. Wong, Carolina Herrera, Margaret O. Ilomuanya, Gustavo F. Doncel

CONRAD Publications

Vaginal drug delivery in women's health remains underutilized and insufficiently studied, largely due to the complexity and dynamic nature of the vaginal microenvironment. Variations in vaginal pH, hormonal levels, and microbiota composition introduce significant biological variability, complicating formulation design and contributing to inconsistent therapeutic outcomes and poor patient adherence. Conventional vaginal formulations often fail to account for these individual differences, highlighting the need for more adaptive and predictive approaches. Emerging advances in artificial intelligence (AI) and machine learning (ML) offer promising strategies to address these challenges by enabling multi-parameter, data-driven formulation development that explicitly considers biological variability. Despite their transformative …

The Crucial Role Of Machine Learning Models In Predicting Current Childhood Asthma: Model Comparison, Calibration, And Shap-Based Interpretation, Aditya Chakraborty, A. K.M. Raquibul Bashar

Epidemiology, Biostatistics, & Environmental Health Faculty Publications

Background: Asthma is one of the most prominent chronic diseases in children and one of the most challenging ailments to diagnose in infants and preschoolers in the United States. Predictive models can be instrumental in improving early diagnosis, personalized treatment strategies, and disease progression. By utilizing nationalized data, this study focuses on building and comparing high-performing analytical predictive models based on the relevant risk factors and identifying the most influential predictors.

Methods: We analyzed cross-sectional BRFSS Asthma Call-Back Survey data (2011-2020; N = 9,813) and randomly split participants into training and testing sets. An XGBoost model (hyperparameters tuned via grid …

Machine Learning For Wearable Sensor-Based Human Movement Rehabilitation: A Five-Year Systematic Review, Yassine Benachour, Farid Flitti, Lina Maloukh, Aicha Beya Far, Elhocine Boutellaa, Mohamed Bentoumi, Marwa Chendeb El Rai, Nour Aburaed, Khaled Ali, Moez Rehman, Sultan Mosleh, Rania Dghaim, Sadok Bouamama

All Works

Wearable-sensor-based human movement analysis is an increasingly important component of digital health and rehabilitation, enabling objective monitoring and data-driven personalization of therapy. In parallel, machine learning (ML) methods have rapidly expanded for interpreting multimodal movement signals, yet the evidence base remains heterogeneous and difficult to benchmark. This PRISMA-guided systematic review synthesizes recent ML approaches for wearable human motion analysis in rehabilitation-oriented health applications. We searched IEEE Xplore, PubMed, and Scopus for English-language studies published from 2021 to 2025 and extracted information on sensor modalities, ML task formulations and model families, dataset characteristics, validation protocols, and reported performance metrics, together with …

Enlem: Ensemble Learning-Based Model To Detect Phishing Websites, Most Nilufa Yeasmin, Md Abu Rumman Refat, Bikash Chandra Singh, Zulfikar Alom, Zeyar Aung, Mohammad Azim

School of Cybersecurity Faculty Publications

Phishing involves manipulating individuals into revealing private data, e.g., user IDs, bank details, and passwords. The observed surge in fraud is related to increased deception, impersonation, and advanced online attacks. Thus, effective phishing detection methods are required to mitigate escalating global phishing threats. Existing methods (e.g., heuristics-based, signature-based, and visual similarity-based methods) attempt to detect phishing sites, and machine learning (ML) and deep learning (DL) methods are effective in the cybersecurity context in terms of learning from data, offering insights, and forecasting. However, independent ML algorithms are limited when handling complex data, and DL techniques surpass traditional ML methods in …

Application Paths Of Semantic Modeling In Financial Fraud Detection And Risk Identification, Victor P. Gauthier, Daniel S. Wu

Computer Science Faculty Publications

Financial fraud and risk pose significant threats to economic stability and individual well-being. Traditional detection methods often struggle to keep pace with increasingly sophisticated fraudulent schemes. Semantic modeling, which focuses on understanding the meaning and relationships within data, offers a promising avenue for enhancing fraud detection and risk identification. This review paper explores the application paths of semantic modeling in this domain. We begin with a historical overview of fraud detection techniques, highlighting the limitations of traditional approaches. Subsequently, we delve into core themes, including knowledge graph-based fraud detection and semantic rule-based inference for risk assessment. We then compare and …

Machine Learning For Recession Prediction, Ethan Reusser

Williams Honors College, Honors Research Projects

Macroeconomic predictions present challenges in machine learning due to the rarity of economic recessions, the constantly-changing matter of global markets, and severe class imbalance in historical data. This project focuses on predicting the onset of United States economic recessions within a 12-month window using Python and Jupyter Notebook. A machine learning pipeline was developed utilizing multiple models: Logistic Regression, Random Forest, XGBoost, and Long Short-Term Memory (LSTM) neural networks. For class imbalance, the Synthetic Minority Over-sampling Technique (SMOTE) was applied strictly to training data, paired with Platt scaling for calibration on thresholds. The resulting models were evaluated in the 2005 …

Machine Learning Classification Of Prostate Cancer Genomic Sequences Using K-Mer And Sequence-Derived Features, Kuldeep Rawat, Hirendra Nath Banerjee, Jamie Noble, Saa Naudia Deloatch, Satyendra Banerjee, Sachin Shetty, Soumya Banerjee

VMASC Publications

Prostate cancer disproportionately impacts African American men, who experience significantly higher mortality rates and earlier disease onset than other populations. Current diagnostic approaches, including prostate-specific antigen testing and biopsy, lack sufficient specificity and sensitivity, underscoring the need for accurate, molecular-level classification tools. This paper presents a machine learning framework for binary classification of genomic DNA sequences as cancerous or healthy. A dataset of 1684 FASTA-formatted sequences obtained from the National Library of Medicine - GenBank was analyzed, with 1662 sequences retained after quality control filtering. Feature engineering yielded 67 attributes, including GC content, Shannon entropy, sequence length, and trinucleotide k-mer …

Interpretable Machine Learning For In-Home Mild Cognitive Impairment Detection, Budhitama Subagdja, Shanthoshigaa D, Ah-Hwee Tan, Iris Rawtaer

Research Collection School Of Computing and Information Systems

This paper introduces a novel system for in-home cognitive health assessment using ambient sensors and a machine learning technology that can robustly detect mild cognitive impairment (MCI) despite limited available data. The learned model can explain the aspects of individuals’ daily lives led to the prediction, while reliably predicting MCI, providing more insights to healthcare workers for further clinical interventions. We developed the robust transparent machine learning model, based on fusion adaptive resonance theory (Fusion ART) neural network to learn individuals’ daily patterns of activity from continuous sensor data in terms of a suite of digital biomarkers reflecting four key …

Limits Of Machine Learning For Predicting Stillbirth At Term: A Population-Based Cohort Of 302,192 Pregnancies In Northern Italy, M. Benuzzi, T. Kawakita, F. Monari, B. Melis, G. Guariglia, A. La Marca, I. Neri, G. Saade, F. Facchinetti, I. El Moudden

Department of Obstetrics & Gynecology Faculty Publications

Background

Objective

Study Design

Interpretable Battery Soh Prediction: A Comparative Interpretability Framework For Multi-Architecture Ml Models, Shafiyee Islam, Gon Namkoong

Electrical & Computer Engineering Faculty Publications

This work introduces a unified interpretability-efficiency framework for lithium-ion battery state of health (SOH) prediction using hybrid deep learning architectures. We comparatively analyze four hybrid models: CNN LSTM MultiHead, CNN Feature Extractor LSTM, DNN LSTM, and DNN BiLSTM to disentangle how network topology, feature composition, and computational design influence both predictive fidelity and physical interpretability. By integrating Monte Carlo Shapley (MC Shapley), background occlusion SHAP (BoSHAP), and ablation analysis, we quantify the contribution and robustness of five electrochemical feature groups: time, capacity, voltage, dQ/dV and peaks of dQ/dV from NASA battery dataset. The results reveal a consistent dominance of differential …

Psag: Projection-Based Stabilized Attribution Guidance For Online Continual Learning, Hang Yu, Kun Hu, Zhuqiang Lu, Steven Qiang Lu, Zhiyong Wang, Fengxiang He

Research outputs 2022 to 2026

Online Continual Learning (OCL) aims to incrementally learn from non-stationary data streams in a one-pass setting, facing the dual challenges of catastrophic forgetting and insufficient training. These challenges intensify the stability-plasticity dilemma, where pre-serving old knowledge conflicts with acquiring new information. In this paper, we propose Projection-based Stabilized Attribution Guidance (PSAG), a modular framework that leverages gradient-based attributions as active guidance signals to selectively preserve task-relevant representations. Our framework consists of three complementary mechanisms: (1) Attribution-Guided Feature Modulation (AGFM) that anchors critical features in the representation space; (2) Importance-Aware Loss Reweighting (IALR) that prioritizes informative samples at the loss level; …

Data-Driven Analysis And Atomistic Simulations Of Next-Generation Materials For Energy Conversion And Storage, Yuliang Shi

Dissertations

Metal-organic frameworks (MOFs), with their modular architectures and tunable properties, represent an especially rich domain for accelerated material design and discovery for a range of diverse applications. Within this class of multifunctional materials, two-dimensional (2D) electrically conductive MOFs (EC MOFs) are of particular interest, as their 7r-stacked layered structures combine permanent porosity with electronic conductivity, enabling potential breakthroughs in energy storage, energy conversion, and quantum sensing. But the discovery and design of new EC MOFs based on expensive experimental screening is increasingly impractical due to the infinite chemical space. Furthermore, the practical implementation of EC MOFs for specific tasks depends …

Hate Speech Detection Using Optimized Feature Representation Via Spiral-Grey Wolf Optimizer-Based Machine Learning Approaches, Noor S. Farhan, Matheel E. Abdulmunim, Hasanen S. Abdullah

Journal of Soft Computing and Computer Applications

Hate speech detection is crucial as social media diversifies. This research present a lightweight, scalable system using traditional machine learning methods along with a new approach called Spiral-Grey Wolf Optimizer (S-GWO).

S-GWO effectively selects key features that consider both meaning and content from the Term Frequency Inverse Document Frequency (TF-IDF) space, leading to high-quality representation without excessive computing power.

The propoused system was tested on Arabic and another English datasets using six machine learning methods: SVM, RF, LR, KNN, NB, and SGD. It achieved 92% accuracy and F1 score on the Arabic dataset, while reaching 100% accuracy on the English …

Real-Time Production Of High-Resolution, Gap-Free, 3-Hourly Aod Over South Korea: A Machine Learning Approach Using Model Forecasts, Satellite Products, And Air Quality Data, Seoyeon Kim, Youjeong Youn, Menas Kafatos, Jaejin Kim, Wonsik Choi, Seung Hee Kim, Yangwon Lee

Institute for ECHO Articles and Research

Aerosol optical depth (AOD) is essential for air quality monitoring and climate research. However, satellite-based retrievals suffer from cloud-related data gaps, and reanalysis products are limited by coarse spatial resolution and substantial production latency. This study develops a real-time, gap-free, high-resolution (1.5 km) AOD retrieval system for South Korea. The system integrates Copernicus Atmosphere Monitoring Service (CAMS) forecasts, high-resolution meteorological fields, and ground-based air quality observations within a machine learning framework. Three models with varying training periods were systematically evaluated using cross-validation and independent validation with 2024 Aerosol Robotic Network (AERONET) data. The optimal model, trained on 2015–2023 data, achieved …

Quantitative Evaluation Of Tunnel Rock Mass Integrity Based On Mwd Technology, Zhang Kunmu, Peng Hao, Liang Ming, Han Yu, Song Guanxian

Journal of China & Foreign Highway

In tunnel construction,the quantitative evaluation of rock mass integrity heavily relies on information from the exposed face,and there are challenges when drilling data is used for integrity evaluation.To this end,this study introduced a novel method for quantitative evaluation of rock mass integrity during drilling,integrating numerical statistics with machine learning.A substantial dataset of digital drilling data was collected,covering three common types of rock mass integrity:relatively intact,relatively fractured,and fractured.Subsequently,a high-performance random forest model for the classification of rock mass integrity was developed through data preprocessing and hyperparameter optimization.The interpretability of the model ’s predictive results was enhanced using Shapley additive explanations (SHAP …

Pixel-Perfect Segmentation Of Solar Filaments, Jamie Harris

Undergraduate Research Symposium

The observation and classification of solar filaments has a drastic impact on the ability to predict solar-magnetic weather phenomena that threatens to put both satellite infrastructure and astronauts at risk. Using the Hɑ filter provided by the Global Oscillations Network Group (GONG), a network of six telescopes around the world dedicated to 24/7 surveillance of the sun, we are able to get images that clearly and prominently display filament activity. With the vast amount of images the GONG takes, it is not possible to manually analyze every image. Using the U-Net model for computer vision, we were able to train …

Decoding The Chameleon Game, Tri Dang '25, Hieu Tran, Brian T. Howard, Sutthirut Charoenphon, Dat Nguyen '25

Student Research

The Chameleon game is a challenging word association activity where players are given a secret word and must respond with words relevant to that secret word. It requires strategic thinking and deduction. The Chameleon must cleverly guess the secret keyword in this game while avoiding suspicion. Our research aims to create an advanced artificial intelligence (AI) model that can play the Chameleon game from both perspectives: as the Chameleon and as a Human. This AI is designed to guess secret keywords based on the information provided by the players, choose the best strategies to avoid detection as the Chameleon, identify …

Marsanywhere: Dataset And Cross-View Diffusion Model For Satellite-To-Ground View Synthesis With Mars Data, Benjamin T. Hinchliff

Master's Theses

Satellite-to-ground view synthesis aims to create a realistic ground view image from a corresponding satellite view image. This is a well-studied problem for street level imagery, with good results being achieved by using modern image synthesis techniques such as diffusion models. However, despite the public availability of satellite and ground level imagery on Mars, these techniques have yet to be applied to the domain due to difficulties in collating and processing the data into a usable form. We address this deficiency by creating a dataset consisting of ground view panorama imagery from the Perseverance rover, along with associated satellite view …

Generalized Detection Of Animal Behavior Using Accelerometers, Alexander J. Arrieta

Master's Theses

Animal mounted sensors are becoming increasingly used to passively monitor both domestic and wild animals. Advances in lightweight accelerometer and GPS technology have allowed many animals to be fitted with high accuracy sensors for extended periods of time. This leads to new opportunities to study animal behavior without direct observation. However, interpreting the raw data is difficult due to the high volume and missing context of the information. Machine learning techniques excel at extracting information from raw data streams and are excellent candidates for processing the sensor data. However, due to large variance in how different animals execute the same …

Applications Of Machine Learning In Gravitational-Wave Research With Current Interferometric Detectors, Elena Cuoco, Marco Cavaglià, Ik Siong Heng, David Keitel, Christopher Messenger

Physics Faculty Research & Creative Works

This article provides an overview of the current state of machine learning in gravitational-wave research with interferometric detectors. Such applications are often still in their early days but have reached sufficient popularity to warrant an assessment of their impact across various domains, including detector studies, noise and signal simulations, and the detection and interpretation of astrophysical signals. In detector studies, machine learning could be useful to optimize instruments like LIGO, Virgo, KAGRA, and future detectors. Algorithms could predict and help in mitigating environmental disturbances in real time, ensuring detectors operate at peak performance. Furthermore, machine-learning tools for characterizing and cleaning …

Data-Driven Streamflow Forecasting In The Upper Colorado River Basin Using Spatio-Temporal Graph Networks, Akhila Akkala

All Graduate Theses and Dissertations, Fall 2023 to Present

Forecasting river flow is essential for managing water supplies, reducing flood risk, and supporting healthy ecosystems. In the Upper Colorado River Basin, much of the yearly water comes from melting snow. However, many traditional models struggle to capture how snowpack and river flow interact, especially across such a large and complex region.

This study uses a modern machine learning approach called a Spatio-Temporal Graph Neural Network (STGNN) to improve streamflow prediction. The model uses Snow Water Equivalent (SWE)—a measure of how much water is stored in the snowpack—along with river flow data. By treating each river gauge as part of …