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Full-Text Articles in Physical Sciences and Mathematics

Gene Regulatory Network Analysis And Web-Based Application Development, Yi Yang Dec 2013

Gene Regulatory Network Analysis And Web-Based Application Development, Yi Yang

Dissertations

Microarray data is a valuable source for gene regulatory network analysis. Using earthworm microarray data analysis as an example, this dissertation demonstrates that a bioinformatics-guided reverse engineering approach can be applied to analyze time-series data to uncover the underlying molecular mechanism. My network reconstruction results reinforce previous findings that certain neurotransmitter pathways are the target of two chemicals - carbaryl and RDX. This study also concludes that perturbations to these pathways by sublethal concentrations of these two chemicals were temporary, and earthworms were capable of fully recovering. Moreover, differential networks (DNs) analysis indicates that many pathways other than those related …


A Model Of Data Structures Commonly Used In Programming Languages And Data Base Management Systems, William L. Honig Jul 2013

A Model Of Data Structures Commonly Used In Programming Languages And Data Base Management Systems, William L. Honig

William L Honig

This thesis claims that contemporary data structures can be understood and studied with an intelligible model which captures their essential differences and similarities and, further, that such a model is an appropriate basis for a top-down description method for data structures. To define the scope of the model, the data structures included in 21 programming languages and data base management systems have been tabulated. Each individual data structure is illustrated with an example drawn from a published paper or a working computer program. This mélange of data structures is divided into three classes (aggregates, associations , and files) and each …


Network Technologies Used To Aggregate Environmental Data, Paul Stasiuk, Konstantin Läufer, George K. Thiruvathukal Jul 2013

Network Technologies Used To Aggregate Environmental Data, Paul Stasiuk, Konstantin Läufer, George K. Thiruvathukal

George K. Thiruvathukal

The goal of the Loyola Weather Service (lws) project is to design and build a system of functioning environmental monitoring widgets that can intelligently and autonomously control the environment around them based on set thresholds and triggers. The widgets will also have the ability to aggregate their data and easily display this data in various ways: through a user interface in the room that the widget is placed, via a web application, and programmatically via a RESTful web service.


The Education Issue, George Thiruvathukal Jul 2013

The Education Issue, George Thiruvathukal

George K. Thiruvathukal

This article is focused on computing education for the 21st Century and how a renewed focus on education is needed to ensure that our discipline remains vibrant and relevant to all students, regardless of whether they are CS majors or not. After all, many graduates end up in a computer science-related job (e.g. information technology, programming, networking/security, etc.) The article specifically focuses on education-related articles that have appeared within the last year or so in the IEEE Computer Society.


Building Capable, Energy-Efficient, Flexible Visualization And Sensing Clusters From Commodity Tablets, Thomas Delgado Dias, Xian Yan, Konstantin Läufer, George K. Thiruvathukal Jul 2013

Building Capable, Energy-Efficient, Flexible Visualization And Sensing Clusters From Commodity Tablets, Thomas Delgado Dias, Xian Yan, Konstantin Läufer, George K. Thiruvathukal

George K. Thiruvathukal

We explore the application of clusters of commodity tablet devices to problems spanning a “trilogy” of concerns: visualization, sensing, and computation. We conjecture that such clusters provide a low-cost, energy-efficient, flexible, and ultimately effective platform to tackle a wide range of problems within this trilogy. This is a work in progress, and we now elaborate our position and give a preliminary status report. A wide range of Android tablet devices are available in terms of price and capabilities. “You get what you pay for” w.r.t. display resolution, sensors, and chipset---corresponding to the trilogy. $200 gets one a 1280x800-pixel touch display, …


Orienteering In Knowledge Spaces: The Hyperbolic Geometry Of Wikipedia Mathematics, Gregory Leibon, Daniel N. Rockmore Jul 2013

Orienteering In Knowledge Spaces: The Hyperbolic Geometry Of Wikipedia Mathematics, Gregory Leibon, Daniel N. Rockmore

Dartmouth Scholarship

In this paper we show how the coupling of the notion of a network with directions with the adaptation of the four-point probe from materials testing gives rise to a natural geometry on such networks. This four-point probe geometry shares many of the properties of hyperbolic geometry wherein the network directions take the place of the sphere at infinity, enabling a navigation of the network in terms of pairs of directions: the geodesic through a pair of points is oriented from one direction to another direction, the pair of which are uniquely determined. We illustrate this in the interesting example …


Network Technologies Used To Aggregate Environmental Data, Paul Stasiuk, Konstantin Läufer, George K. Thiruvathukal May 2013

Network Technologies Used To Aggregate Environmental Data, Paul Stasiuk, Konstantin Läufer, George K. Thiruvathukal

Computer Science: Faculty Publications and Other Works

The goal of the Loyola Weather Service (lws) project is to design and build a system of functioning environmental monitoring widgets that can intelligently and autonomously control the environment around them based on set thresholds and triggers. The widgets will also have the ability to aggregate their data and easily display this data in various ways: through a user interface in the room that the widget is placed, via a web application, and programmatically via a RESTful web service.


Building Capable, Energy-Efficient, Flexible Visualization And Sensing Clusters From Commodity Tablets, Thomas Delgado Dias, Xian Yan, Konstantin Läufer, George K. Thiruvathukal May 2013

Building Capable, Energy-Efficient, Flexible Visualization And Sensing Clusters From Commodity Tablets, Thomas Delgado Dias, Xian Yan, Konstantin Läufer, George K. Thiruvathukal

Computer Science: Faculty Publications and Other Works

We explore the application of clusters of commodity tablet devices to problems spanning a “trilogy” of concerns: visualization, sensing, and computation. We conjecture that such clusters provide a low-cost, energy-efficient, flexible, and ultimately effective platform to tackle a wide range of problems within this trilogy. This is a work in progress, and we now elaborate our position and give a preliminary status report.

A wide range of Android tablet devices are available in terms of price and capabilities. “You get what you pay for” w.r.t. display resolution, sensors, and chipset---corresponding to the trilogy. $200 gets one a 1280x800-pixel touch display, …


Dhl And Singapore Management University Launch Green Transformation Lab, Singapore Management University May 2013

Dhl And Singapore Management University Launch Green Transformation Lab, Singapore Management University

SMU Press Releases

DHL, the world’s leading logistics company, is partnering with Singapore Management University (SMU) to accelerate the evolution of sustainable logistics across Asia Pacific with the launch of the Green Transformation Lab. This S$2 million initiative, hosted at the SMU School of Information Systems on the University’s city campus, will focus on the creation of innovative solutions to help organizations transform their businesses towards sustainable green growth and drive beneficial change in supply chains across the region. This joint DHL-SMU initiative will fulfill its mission through education, research and best practice development.


A Qualitative And Evaluative Study On Recruiting And Retaining Students In College Computer Science Programs, Matthew Gardner May 2013

A Qualitative And Evaluative Study On Recruiting And Retaining Students In College Computer Science Programs, Matthew Gardner

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Computer science is a discipline that is increasing in importance and value in our society, yet we are still failing to graduate a sufficient number of students to keep up with the demand required in the United States economy. We research several ways to retain students. We also discuss ways to increase students’ interest in the major, i.e., those who normally would not know about computer science. We discuss ways to increase female participation as well as overall participation in the major.


File Transfer Web Application, Madhavi Dintakurthy Apr 2013

File Transfer Web Application, Madhavi Dintakurthy

All Capstone Projects

Aim is to develop a web application using java web framework.

Description: Develop a web application in 3 tier architecture involving user interface, controller and database. The user interface will be a web page hosted on a server. The web page consists of both static and dynamic content. All the data required for the application is stored in database tables. Controller accesses the data from the database and provides it to the user through user interface (web page).

  • Web page: The webpage serves as user interface to the application. Web page is developed using Jsp, HTML, Java Script …


Creating A Faculty Learning Community To Support Scholarship Of Teaching And Learning Among Stem University Faculty, Cher C. Hendricks, Myrna Gantner Mar 2013

Creating A Faculty Learning Community To Support Scholarship Of Teaching And Learning Among Stem University Faculty, Cher C. Hendricks, Myrna Gantner

Interdisciplinary STEM Teaching & Learning Conference (2012-2019)

In this session, we describe the creation of a Faculty Learning Community for university faculty in science, mathematics, and computer science. These faculty, recipients of mini-grants funded by the USG STEM Initiative, are studying ways to improve their instruction and increase student learning in STEM courses. Through the FLC, they are able to collaborate and support each others’ work.


The Meaning Of Music-Making For Computer Scientists With A Serious Musing-Making Avocation: A Phenomenological Case Study, Varda Shaked Jan 2013

The Meaning Of Music-Making For Computer Scientists With A Serious Musing-Making Avocation: A Phenomenological Case Study, Varda Shaked

Educational Studies Dissertations

This study explores the meaning of music-making in the lives of computer scientists who play classical music as their serious avocation. In particular, it investigates their tendencies and capacities to concurrently engage in two such distinct disciplines on a regular basis, by exploring the cognitive, social, and cultural aspects of their concurrent engagement. While current research literature approaches the affinities between mathematicians/scientists and musicians through the presence of mathematical properties of music and through anecdotal evidence involving known persona and their innovations, this study provides a deeper look at the individuals who combine such worlds, in order to better understand …


Multi-Label Segmentation Propagation For Materials Science Images Incorporating Topology And Interactivity, Jarrell Waggoner Jan 2013

Multi-Label Segmentation Propagation For Materials Science Images Incorporating Topology And Interactivity, Jarrell Waggoner

Theses and Dissertations

Segmentation propagation is the problem of transferring the segmentation of an image to a neighboring image in a sequence. This problem is of particular importance to materials science, where the accurate segmentation of a series of 2D serial-sectioned images of multiple, contiguous 3D structures has important applications. Such structures may have prior-known shape, appearance, and/or topology among the underlying structures which can be considered to improve segmentation accuracy. For example, some materials images may have structures with a specific shape or appearance in each serial section slice, which only changes minimally from slice to slice; and some materials may exhibit …