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2026

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Full-Text Articles in Physical Sciences and Mathematics

A Systematic Review And Characterization Of Privacy Noncompliance In Real-World Applications, Alexander E. Charkiewicz Jan 2026

A Systematic Review And Characterization Of Privacy Noncompliance In Real-World Applications, Alexander E. Charkiewicz

Graduate Studies Theses and Dissertations 2026

Software applications increasingly rely on user data to provide their functionality, but improper handling of such data can lead to serious privacy noncompliance with applicable regulations and policies. A prominent example is the Facebook–Cambridge Analytica scandal, in which a third-party application collected the personal data of approximately 87 million Facebook users without users' consent. Despite growing attention to privacy compliance, two key challenges hinder the systematic understanding and analysis of privacy noncompliance. First, unlike security vulnerabilities, which have been systematically categorized through taxonomies such as the Common Weakness Enumeration (CWE), privacy noncompliance lacks a technical taxonomy describing how it manifests …


Design, Fabrication Modeling, And Optical Metrology Of Mwir Silicon Metalenses, Weiyu Chen Jan 2026

Design, Fabrication Modeling, And Optical Metrology Of Mwir Silicon Metalenses, Weiyu Chen

Graduate Studies Theses and Dissertations 2026

Mid-wave infrared (MWIR) optical systems require compact, broadband, manufacturable components whose performance can be predicted and measured reliably. Silicon metalenses are attractive because silicon combines high refractive index, MWIR transparency, and semiconductor-compatible fabrication. This dissertation develops a scale-bridging design–fabrication-modeling–metrology framework for MWIR silicon metalenses.

A shared full-aperture framework connects meta-atom libraries, physical layout generation, angular-spectrum propagation, point-spread-function calculation, and focal-plane energy metrics. Building on this foundation, the Dispersive Sweatt Model (DSM) incorporates meta-atom dispersion into conventional ray-tracing software, enabling broadband co-optimization of metasurfaces and refractive elements. A process-aware design framework then incorporates scanning electron microscopy (SEM)-measured height–radius relationships produced by …


An Empirical Comparison Of K-Nearest-Neighbors And Logistic Regression Classification Models, Jackson Cushing Jan 2026

An Empirical Comparison Of K-Nearest-Neighbors And Logistic Regression Classification Models, Jackson Cushing

Graduate Studies Theses and Dissertations 2026

This thesis presents an empirical comparison of two classification methods: Logistic Regression and K Nearest Neighbors (KNN). The primary objective of this research is to evaluate the strengths and limitations of each method when applied to real-world datasets. Several publicly available datasets on diabetes, breast cancer, heart attack risk, and cardiovascular disease, were analyzed. For each dataset, K Nearest Neighbors models were implemented in the same way logistic regression had already been applied. The results demonstrate that while logistic regression offers interpretable parameter estimates and performs well when the underlying predictor and outcome relationship is approximately linear, however KNN can …


Non-Gaussian Phenomena In Light Scattering And Applications, Shubham Atul Dawda Jan 2026

Non-Gaussian Phenomena In Light Scattering And Applications, Shubham Atul Dawda

Graduate Studies Theses and Dissertations 2026

Physical reality is rarely deterministic; which, when probed by electromagnetic fields that also fluctuate, leads to observables that are most efficiently modelled as statistical processes. At equilibrium, this is usually achieved by invoking the Gaussian statistics of underlying physical processes, however, in practice, one often encounters out-of-equilibrium conditions where Gaussian descriptions may not suffice. Such situations are plentiful in nature– from biology to astronomy. This dissertation addresses several non-Gaussian phenomena associated with light scattering, and includes specific models’ derivations, experimental techniques developments, and demonstrations of potential applications. The systematic presentation will consider circumstances that infringe upon specific assumptions of the …


Deciphering Ultrafast Photoinduced And Photocatalytic Reaction Dynamics On Oxide Surfaces: Direct Detection Of Radical Intermediates, Fragment Trapping, And Carbon–Carbon, Carbon–Oxygen, And Carbon–Hydrogen Bond Formation Pathways, Aakash Gupta Jan 2026

Deciphering Ultrafast Photoinduced And Photocatalytic Reaction Dynamics On Oxide Surfaces: Direct Detection Of Radical Intermediates, Fragment Trapping, And Carbon–Carbon, Carbon–Oxygen, And Carbon–Hydrogen Bond Formation Pathways, Aakash Gupta

Graduate Studies Theses and Dissertations 2026

Understanding photoinduced reactions at solid interfaces is essential for advancing heterogeneous photocatalysis, surface photochemistry, and energy conversion technologies. This dissertation investigates the ultrafast dynamics of reactive intermediates, fragment trapping, and radical-mediated bond formation on oxide surfaces using time-of-flight mass spectrometry in conjunction with femtosecond pump-probe spectroscopy. Various experimental findings are validated through collaborations via density functional theory (DFT). By combining temporal, mass, and energy-resolved measurements, this work provides molecular-level insight into the elementary processes governing light-driven surface reactions. The photodissociation dynamics of CH3I adsorbed on TiO2(110), TiO2(100), and amorphous silicon oxide surfaces are examined …


Integrated Optical Probes For Confocal Scanning Imaging And Adjustable Coherent-Gated Dynamic Sensing, Yonglin Huang Jan 2026

Integrated Optical Probes For Confocal Scanning Imaging And Adjustable Coherent-Gated Dynamic Sensing, Yonglin Huang

Graduate Studies Theses and Dissertations 2026

Optics and photonics have been one of the most important sciences and technologies that impact modern human life in a big way. For example, fiber-optics for communications and artificial intelligence. Optical probes are critical components for optical imaging and optical sensing technologies that have been actively researched and developed in the past decades. Advanced fiber-optic sensor probes with smaller size, better performance, lower noise, higher photon efficiency, rapid sensing time, and lower cost are needed in many applications, such as nanoscale material science, chemistry, and biomedical fields, etc.  In this project, new fiber-optic sensor probe technologies and integrated micro-optic devices …


Advances In Active And Passive Integrated Photonic Devices On Thin-Film Lithium Niobate, Pooja S. Kulkarni Jan 2026

Advances In Active And Passive Integrated Photonic Devices On Thin-Film Lithium Niobate, Pooja S. Kulkarni

Graduate Studies Theses and Dissertations 2026

Thin-film lithium niobate (TFLN) has emerged as a powerful platform for integrated photonics, combining the exceptional electro-optic, nonlinear, and optical properties of bulk lithium niobate with the scalability and compactness of planar nanophotonic technologies. Building on these principles, advanced device architectures such as adiabatic dichroic filters have demonstrated exceptional spectral performance spanning over two octaves of bandwidth on the TFLN platform. Beyond reciprocal devices, it also offers promising pathways toward integrated nonreciprocal components. By leveraging broadband filtering structures and advanced nonlinear photonic design strategies, compact and monolithic optical isolators can be envisioned without relying on traditional magneto-optic materials. In the …


Modeling And Mitigating Atmospheric Degradation In Computer Vision With Application In Renewable Energy Prediction, Sumit Laha Jan 2026

Modeling And Mitigating Atmospheric Degradation In Computer Vision With Application In Renewable Energy Prediction, Sumit Laha

Graduate Studies Theses and Dissertations 2026

Weather-induced variability poses significant challenges to the reliability and performance of modern computational systems, particularly those relying on visual perception and environmental prediction. This dissertation focuses on enhancing computer vision and machine learning based predictive models that operate under varying atmospheric conditions. Two representative weather-impacted applications are investigated: image dehazing and solar photovoltaic (PV) power output forecasting. Image dehazing focuses on the restoration of clear, unobstructed visuals from hazy or foggy images, a task that is vital for various applications. On the other hand, photovoltaic (PV) power forecasting aims to predict future solar energy generation based on historical sky images …


Multi-Scale Drivers Of Beetle Biodiversity In A Rapidly Urbanizing Region, Alessandra Pandolfi Jan 2026

Multi-Scale Drivers Of Beetle Biodiversity In A Rapidly Urbanizing Region, Alessandra Pandolfi

Graduate Studies Theses and Dissertations 2026

As cities continue to expand, designing urban landscapes that balance ecological resilience with biodiversity conservation has emerged as a pressing challenge. This dissertation examines urban ecosystems as complex and dynamic environments shaping plant and animal communities, with a particular focus on ground-dwelling beetles as ecologically significant indicators of environmental change. Conducted across the Orlando metropolitan area, one of the fastest-growing regions in the United States, this dissertation integrates experimental and observational approaches. Specifically, it aims to (1) test sustainable landscaping practices, (2) compare the ecological outcomes of conventional and alternative residential landscape designs, and (3) assess how gradients of urbanization …


Visual Cues Of Human-Likeness, Not Salience, Impact Trust-Related Human-Computer Interaction, Jordan Schotz Jan 2026

Visual Cues Of Human-Likeness, Not Salience, Impact Trust-Related Human-Computer Interaction, Jordan Schotz

Graduate Studies Theses and Dissertations 2026

As interactions with digital agents become increasingly integrated into daily life, understanding how visual representations influence social decision-making is critical. Previous research in human-computer interaction has frequently confounded the psychological effects of an agent's perceived human-likeness with the underlying visual salience of the stimuli. To address these persistent gaps, the present study systematically isolated the effects of human-likeness and visual cue trustworthiness on trust behavior while controlling for objective image properties. The present study expanded on and normed the Virtual Avatar Facial Stimuli Set (VAFSS), a comprehensive database comprising hundreds of identity-matched photographs and computer-generated avatars varying across a spectrum …


Concept Drift Detection For Streaming Data Using One-Class Classification, Poorna Sandamini Senaratne Jan 2026

Concept Drift Detection For Streaming Data Using One-Class Classification, Poorna Sandamini Senaratne

Graduate Studies Theses and Dissertations 2026

Modern machine learning systems are increasingly deployed in streaming environments where data arrive sequentially and the underlying data-generating process may evolve over time. This phenomenon, known as concept drift, can significantly degrade model performance if not detected and addressed in a timely manner. This dissertation proposes a principled framework for concept drift detection based on one-class classification, integrating neural network embeddings with Support Vector methodologies.

The proposed approach leverages neural networks to learn compact and informative embeddings of input data, capturing complex nonlinear structures in a lower-dimensional latent space. These embeddings are then used to construct a statistical description of …


Volumetric Fluorescence Microscopy For High-Throughput And High-Sensitivity Imaging: From Single Molecules To Tissues, Le-Mei Wang Jan 2026

Volumetric Fluorescence Microscopy For High-Throughput And High-Sensitivity Imaging: From Single Molecules To Tissues, Le-Mei Wang

Graduate Studies Theses and Dissertations 2026

Fluorescence microscopy is an indispensable tool in the biological sciences, enabling researchers to investigate intricate subcellular structures, particularly for volumetric studies. However, conventional optical microscopy for volumetric imaging remains fundamentally constrained by imaging speed and throughput. To bypass traditional serial z-scanning, we introduce an axially scan-free method using a phase layer cake to modulate the system's point spread function. This approach projects volumetric information onto a 2D plane in a single shot, offering high flexibility in tuning axial depth alongside simultaneous multicolor imaging with high spatial resolution and sensitivity. This dissertation divides these technical advancements into cellular and tissue imaging …


First-Principles Insights Into Electronic And Magnetic Structure At Hybrid Interfaces And Low-Dimensional Materials And Reaction On Surfaces, Bushra Ashraf Jan 2026

First-Principles Insights Into Electronic And Magnetic Structure At Hybrid Interfaces And Low-Dimensional Materials And Reaction On Surfaces, Bushra Ashraf

Graduate Studies Theses and Dissertations 2026

Low-dimensional materials and transition metal surfaces/interfaces provide complementary platforms for understanding how dimensionality, symmetry, spin–orbit coupling (SOC), and interfacial charge transfer/hybridization jointly control electronic structure, emergent magnetism, and surface reactivity. Using first-principles modeling with experimental comparisons, this work aims to establish interfacial structure–property relationships across low-dimensional systems.

Strained Pd adlayers on 2H-MoS2(0001) provide a controlled platform to separate strain-driven exchange from interface-induced quenching in an itinerant d-electron metal. Although expansive strain promotes magnetism in free-standing Pd, strong Pd–MoS2 hybridization and charge transfer suppress the monolayer moment and leave a narrow thickness window where magnetism re-emerges in …


Investigating Effects Of The Macroalga Caulerpa Prolifera On Restoration Of The Seagrass Halodule Wrightii In The Indian River Lagoon, Florida, Luciana M. Banquero Jan 2026

Investigating Effects Of The Macroalga Caulerpa Prolifera On Restoration Of The Seagrass Halodule Wrightii In The Indian River Lagoon, Florida, Luciana M. Banquero

Graduate Studies Theses and Dissertations 2026

Seagrass restoration efforts have been motivated by global decreases in coverage associated with anthropogenic influences on the environment. In the Indian River Lagoon (IRL), FL, seagrass declined by 75% between 2011 and 2021. During this time, abundance of the macroalga Caulerpa prolifera increased substantially in the IRL. The macroalga is native to this estuary, however C. prolifera abundance has fluctuated widely in the past few decades. Being highly opportunistic, C. prolifera took advantage of areas formerly inhabited by seagrass. It is not known how dense, continuous beds of C. prolifera impact seagrass restoration projects or natural recovery of seagrass. Previous …


Understanding The Potential Biogeochemical Effects Of Alternative Restoration Materials: A Study Of Basalt And Other Materials, Cadie L. Barnes Jan 2026

Understanding The Potential Biogeochemical Effects Of Alternative Restoration Materials: A Study Of Basalt And Other Materials, Cadie L. Barnes

Graduate Studies Theses and Dissertations 2026

Concern over the effects of microplastics on estuarine ecosystems and public health has prompted many restoration practitioners to switch from plastic materials to more “natural” substrates. These natural (BESE-biopolymer, cement-jute structures) and non-plastic (basalt fiber) materials should not contain harmful substances; however, their chemical composition is unknown. Natural materials may degrade faster in subtropical environments and release nutrients into surrounding waters, which is concerning for eutrophic restoration areas. Basalt fiber bags, made from melted basalt rock spun into fibers, have not been evaluated for biogeochemical impacts within estuaries. To address this knowledge gap, two field experiments and two laboratory experiments …


Investigation Of Exotic Phenomena In Topological Quantum Materials, Iftakhar Bin Elius Jan 2026

Investigation Of Exotic Phenomena In Topological Quantum Materials, Iftakhar Bin Elius

Graduate Studies Theses and Dissertations 2026

he First Quantum Revolution established quantum mechanics as the foundation of modern physics, enabling transformative technologies such as semiconductors, lasers, and transistors through prin-ciples of quantization, wave-particle duality, and uncertainty. The ongoing Second Quantum Rev-olution harnesses entanglement, superposition, and coherence to advance quantum computation, communication, simulation, and sensing. Central to this endeavor is the study of quantum mate-rials hosting novel electronic structures and emergent phases, including topological insulators and Dirac, Weyl, and nodal-line semimetals. In this thesis, using angle-resolved photoemission spec-troscopy (ARPES), transport measurements, and density functional theory (DFT) calculations, we investigate three classes of materials: (i) magnetic topological semimetals, …


Detonability Limits Of Liquid Fuel Cloud, Khaoula Chougag Jan 2026

Detonability Limits Of Liquid Fuel Cloud, Khaoula Chougag

Graduate Studies Theses and Dissertations 2026

Detonation-based propulsion systems are of significant interest owing to their high thermodynamic efficiency, rapid energy release, and favorable entropy production relative to deflagration-based systems. Liquid fuels offer practical advantages in storage and volumetric energy density, making them attractive candidates for next-generation detonation engines. This dissertation investigates the detonability characteristics of liquid hydrocarbon fuel clouds through three interconnected studies conducted in a turbulent shock-tube environment using high-speed imaging and pressure diagnostics. The first study maps the detonability limits of monodisperse n-dodecane clouds by systematically varying droplet diameter (5-50 μm) and O₂/N₂ oxidizer composition at equivalence ratios spanning ϕ = 0.8-2.0. Results …


Detection And Discrimination Of Targets In Infrared Imagery, Adam T. Cuellar Jan 2026

Detection And Discrimination Of Targets In Infrared Imagery, Adam T. Cuellar

Graduate Studies Theses and Dissertations 2026

Automated infrared (IR) imagery analysis is essential for persistent surveillance, defense, and security, yet it remains difficult when sensors move and when unknown objects appear. This dissertation addresses two fundamental problems: (1) detecting small moving targets amid platform-motion induced parallax and (2) distinguishing between known stationary targets and out-of-distribution (OOD) objects.   For detecting moving targets while the platform itself is in motion, auxiliary Global Positioning System and Inertial Navigation System data are combined with image analysis. Direction Cosine Matrices from calibrated inertial measurements enable sub-pixel frame alignment unattainable with purely image-based registration. The stabilized sequence is processed by a Reed–Xiaoli …


A Reconstruction Method For The Anisotropic Electrical Conductivity In A Hybrid Planar Inverse Problem, Athanasios Dimitriadis Jan 2026

A Reconstruction Method For The Anisotropic Electrical Conductivity In A Hybrid Planar Inverse Problem, Athanasios Dimitriadis

Graduate Studies Theses and Dissertations 2026

Some single-physics medical imaging methods fail to reliably discriminate benign from malignant biological tissue. In partial response, a new class of inverse problems employ multi-physics phenomena, coupling methods of high resolution with methods of high contrast. In this thesis we are concerned with one such problem in which an anisotropic electrical conductivity is to be recovered from some internal knowledge of the current density field generated by maintaining a fixed boundary voltage. This internal data is obtained by the method of Current Density Impedance Imaging (CDII), which combines Maxwell's equations with Magnetic Resonance Imaging (MRI) measurements. The anisotropy class is …


High-Efficiency And Compact Virtual Reality Displays, Zhenyi Luo Jan 2026

High-Efficiency And Compact Virtual Reality Displays, Zhenyi Luo

Graduate Studies Theses and Dissertations 2026

Virtual reality (VR) and augmented reality (AR) technologies are revolutionizing the way humans interact with digital information. However, current near-eye display systems still face critical challenges regarding optical efficiency, image quality, and device weight. This dissertation focuses on addressing these limitations through innovative liquid-crystal (LC) optics and system-level design strategies to achieve high-efficiency and compact VR displays.

First, to solve the longstanding problem of severe chromatic aberrations in ultrathin LC optics, I proposed an achromatic diffractive LC device. By stacking three LC layers with specifically designed spectral responses and polarization selectivity, I successfully reduced the chromatic aberrations. This idea enables …


Computational Regolith Mechanics And Instrumentation Development For Lunar Exploration And Resource Utilization, Jared M. Long-Fox Jan 2026

Computational Regolith Mechanics And Instrumentation Development For Lunar Exploration And Resource Utilization, Jared M. Long-Fox

Graduate Studies Theses and Dissertations 2026

Sustained exploration of the Moon requires quantitative understanding of lunar regolith properties to support scientific investigation, in situ resource utilization, excavation, and infrastructure development. This dissertation examines the mechanical interaction between robotic excavation systems and lunar regolith, emphasizing how regolith behavior both enables and constrains exploration-focused and exploration-enabled science. Computational excavation models were compared to laboratory data to evaluate prediction of excavation forces and to develop metrics of excavation efficiency. Laboratory experiments using high-fidelity lunar regolith simulants were conducted to characterize pressure-sinkage behavior, shear strength, and angle of repose across a range of material states. Common analytical excavation and terramechanics …


Deceptive Design And Disability: How Dark Patterns Affect Users With Visual Impairments, Konstantin Metz Jan 2026

Deceptive Design And Disability: How Dark Patterns Affect Users With Visual Impairments, Konstantin Metz

Graduate Studies Theses and Dissertations 2026

Dark patterns are deceptive interface designs that steer users toward unintended actions, often at financial or privacy cost. This thesis examines how those that are vision impaired are at greater risk of these dark patterns given their visual acuity deficit. We conducted semi structured interviews with nine participants across common contexts including e-commerce checkout, subscription and cancellation flows, software download pages, and mobile permission prompts. The data show recurring exposure to dark patterns such as hidden or de-emphasized fees, pre-selected add-ons, deceptive advertising and fake download buttons along with unequal consent paths, repeated permission nagging, and cancellation friction. Participants reported …


Revolution In The Age Of Social Media: A Mathematical Model For Information, Dissent, And Stability, Killian Muollo Jan 2026

Revolution In The Age Of Social Media: A Mathematical Model For Information, Dissent, And Stability, Killian Muollo

Graduate Studies Theses and Dissertations 2026

Revolutions, defined by Skocpol as rapid transformations in class, state, and/or social structures, are important world events that can cause civil wars, spark international trends, and result in transitions toward democratic and autocratic regimes alike. They are characterized largely by the mechanism of mass mobilization, which is increasingly facilitated by online networks and digital communication. In this dissertation, we investigate such means and outcomes of revolutions as dynamical systems. We construct three models describing separate but complementary aspects of revolution, beginning at the smallest unit of analysis and then moving outward in scope. First, we construct a graph-based model to …


A Theoretical Study Of Molecular Photoionization: Applications To Molecules Of Astrophysical And Atmospheric Interest, Conner Penson Jan 2026

A Theoretical Study Of Molecular Photoionization: Applications To Molecules Of Astrophysical And Atmospheric Interest, Conner Penson

Graduate Studies Theses and Dissertations 2026

This thesis is devoted to the development of the model for total molecular photoionization spectra which is general to diatomic molecules and the application of this model to two benchmark systems, CH and N2, for verification. This model combines multi-channel quantum defect theory, first-principles ab initio molecular calculations, and vibrational frame transformation to accurately model molecular photoionization and electron impact including vibrational dynamics. The scattering data and transition dipole moments for the molecular systems were calculated using R-matrix method through the UKRMol+ codes. A vibrational frame transformation is then performed and multi-channel quantum defect theory is used to calculate closed …


Report On A Gpr Survey Of The Copper Harbor Cemetery, Copper Harbor, Michigan, Grace Griffin Jan 2026

Report On A Gpr Survey Of The Copper Harbor Cemetery, Copper Harbor, Michigan, Grace Griffin

Dissertations, Master's Theses and Master's Reports

The Copper Harbor Cemetery in Grant Township, Michigan, is one of the oldest settler cemeteries in the Keweenaw, with the earliest burial dating back to 1853. The cemetery is also still used by the community today. However, consistent burial records have not been maintained throughout the cemetery's entire history, leading to some doubt about which areas of the cemetery can be opened for new burials and where excavation should be avoided. For this reason, Grant Township commissioned a ground penetrating radar (GPR) survey of the cemetery, primarily to locate anomalies indicating possible unmarked graves and possible buried headstones. The survey …


The Excess Path Length Distribution: A Stochastic Model For Sample-Based Path Planners, Chaz B. Cornwall Jan 2026

The Excess Path Length Distribution: A Stochastic Model For Sample-Based Path Planners, Chaz B. Cornwall

Dissertations, Master's Theses and Master's Reports

Through random sampling, sample-based path planners enable autonomous agents to quickly find paths without human intervention. However, due to the paths' randomness, sample-based path planners currently require additional verification, partially nullifying agents' ability to act autonomously. I set out to characterize this uncertainty so humans know what to expect from these path planners and know how to alter the path planner to desired specifications. To ensure the results are theoretical as well as practical, I first create a stochastic model of path length uncertainty using the trade-off between sampling time and optimality. By leveraging this model, my proposed algorithm reduces …


Microgravity-Induced Alterations In Left Atrial Hemodynamics And Thrombogenic Risk: Insights From Healthy And Atrial Fibrillation Models, Grace M. Hoeppner Jan 2026

Microgravity-Induced Alterations In Left Atrial Hemodynamics And Thrombogenic Risk: Insights From Healthy And Atrial Fibrillation Models, Grace M. Hoeppner

Dissertations, Master's Theses and Master's Reports

Background: Microgravity exposure alters cardiovascular loading, yet its impact on left atrial flow dynamics and thrombotic risk remains poorly understood. This study investigates how spaceflight-relevant microgravity-induced changes in cardiac outflow affect left atrial hemodynamics in healthy individuals and patients with atrial fibrillation.

Methods: Patient-specific left atrial models were generated for three healthy individuals and three AF patients. Computational fluid dynamics (CFD) simulations were performed using each patient’s baseline mitral outflow waveform and two modified waveforms representing short- and long-duration post-flight cardiac loading changes derived from echocardiographic observations. Hemodynamic metrics included left atrial velocity, time averaged wall shear stress, oscillatory shear …


Computational And Ai Frameworks For Identifying Key Regulatory Genes And Their Target Genes In Plants And Humans, Md Khairul Islam Jan 2026

Computational And Ai Frameworks For Identifying Key Regulatory Genes And Their Target Genes In Plants And Humans, Md Khairul Islam

Dissertations, Master's Theses and Master's Reports

This dissertation presents computational and AI-driven frameworks for identifying key regulatory genes and their downstream targets across plant and human biological systems. Three studies address distinct challenges in genomic regulation using advanced machine learning and bioinformatics approaches.

The first study introduces DyGAF (Dynamic Gene Attention Focus), a dual-attention transformer framework that identifies and ranks disease-relevant biomarker genes by simultaneously modeling independent molecular responses and interdependent regulatory network behavior. Two attention models provide complementary perspectives on gene importance and are fused through a novel combination metric. Applied to COVID-19 nasopharyngeal swab profiles, the attention-weighted representations achieved 94.23% classification accuracy, high sensitivity, …


Novel Chiral Interstellar Molecules: Quantum Anharmonic Ir And Vcd Predictions, Meredith Paik Jan 2026

Novel Chiral Interstellar Molecules: Quantum Anharmonic Ir And Vcd Predictions, Meredith Paik

Dissertations, Master's Theses and Master's Reports

The 2016 discovery of the chiral molecule propylene oxide (C3H6O) in the interstellar medium (ISM) has opened new avenues into explaining the origin of biomolecular homochirality on Earth. Thus, studies of chiral molecules in the ISM may be able to reveal more about the mechanism behind homochirality. However, while the search for chiral molecules in space has become an active field of study, astrochemical researchers have yet to detect other chiral molecules in the ISM. For this purpose, numerous characteristics for detectability have been outlined that may facilitate the discovery of other interstellar chiral molecules. With …


Applied Forest Restoration And Conservation In Michigan: Advancing American Beech Restoration And Documenting A Historical Insect Collection, Thomas E. Panella Jan 2026

Applied Forest Restoration And Conservation In Michigan: Advancing American Beech Restoration And Documenting A Historical Insect Collection, Thomas E. Panella

Dissertations, Master's Theses and Master's Reports

Forest restoration and conservation require both practical management approaches and the preservation of biological resources that support future research. This dissertation presents applied research conducted in Michigan that advances American beech (Fagus grandifolia) restoration in response to beech bark disease (BBD) while documenting an important historical entomological resource. Chapters 1–3 focus on overcoming practical barriers to American beech restoration. Restoration protocols were developed and refined for identifying BBD-resistant trees, graft propagation, rootstock collection, container production, and the field establishment of grafted BBD-resistant trees. A greenhouse experiment evaluated the influence of growing media and fertilization on container stock quality, …