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Articles 361 - 390 of 12189
Full-Text Articles in Physical Sciences and Mathematics
There Is No Obstruction To A Euclidean Proof For The Fourth Postulate, José Gil-Férez, Piotr Błaszczyk, M. Andrew Moshier, Alberto Naibo, Jean-Michel Salanskis
There Is No Obstruction To A Euclidean Proof For The Fourth Postulate, José Gil-Férez, Piotr Błaszczyk, M. Andrew Moshier, Alberto Naibo, Jean-Michel Salanskis
Mathematics, Physics, and Computer Science Faculty Articles and Research
In Gil-Férez et al. (2025), we presented a proof of Postulate 4 using purely Euclidean techniques, against which Blåsjö (2025) raised several objections. In this note, we offer linguistic, textual, historical, and mathematical evidence that demonstrate that all these objections are baseless.
Fault Structure, Deformation Mechanisms, And Why Fault Zones Matter To Society, Elizabeth S. Petrie, David A. Ferrill, Kelly K. Bradbury, James P. Evans
Fault Structure, Deformation Mechanisms, And Why Fault Zones Matter To Society, Elizabeth S. Petrie, David A. Ferrill, Kelly K. Bradbury, James P. Evans
Geosciences Faculty Publications
Faults are widespread geologic structures that form in sediment and all rock types, occur in all tectonic regimes, and can be a blessing or a curse to society. Faults and fault zones act as conduits for underground movement of water and as plumbing systems for aquifers and springs essential for human habitation in many semi-arid and arid regions worldwide. Faults also provide pathways for natural oil and gas migration and high-permeability zones in hydrocarbon reservoirs, as well as barriers contributing to trapping and reservoir compartmentalization. By enhancing permeability in many geothermal energy systems, faults can be essential for fluid circulation …
The Effect Of Phosphate Fertilizer And Organic Matter On Phosphorus Status, Ph, And Cabbage Yield In Andisols, Mahfud Arifin, Emma Trinurani Sofyan, Anni Yuniarti, Rina Devnita, Sastrika Anindita
The Effect Of Phosphate Fertilizer And Organic Matter On Phosphorus Status, Ph, And Cabbage Yield In Andisols, Mahfud Arifin, Emma Trinurani Sofyan, Anni Yuniarti, Rina Devnita, Sastrika Anindita
Jurnal Kultivasi
Andisols are characterized by high phosphorus (P) retention, which often limits P availability for crops. This study aimed to analyze the independent and interactive effects of P fertilizer and organic matter (i.e. manure and rice straw compost) on P retention, total P, available P, P uptake, soil pH, and cabbage yield. This research was conducted in pot experiments in plastic house, applying P fertilizer (0, 90, 180, 270 kg ha-1) and organic matter (20 kg ha-1 of chicken, sheep, cow manures and rice straw compost) on Andisols planted with cabbage. The experiment used a factorial randomized design. The results showed …
A Comprehensive Study Of Clique Graphs And Clique Regular Graphs, Connor Phillips
A Comprehensive Study Of Clique Graphs And Clique Regular Graphs, Connor Phillips
Senior Honors Projects, 2020-current
If Γ is a graph for which every edge is in exactly one clique of order ω, then one can form a new graph with vertex set equal to these cliques. This is a generalization of the line graph of Γ. We discover many general results and classifications related to these clique graphs that will be useful to researchers studying graphs with this property. In particular, we find bounds on the spectrum of Γ (with exact results when Γ is k-regular) and some complete classifications when Γ is strongly regular. We apply our results to derive novel information about the …
Contemporary Martian Geomorphic Processes And The Suitability Characterization Of Terrestrial Analogues, Daniel Paul Mason
Contemporary Martian Geomorphic Processes And The Suitability Characterization Of Terrestrial Analogues, Daniel Paul Mason
Earth and Planetary Sciences ETDs
Both historical and contemporary evidence for geomorphic activity on the surface of Mars is apparent. This evidence is showcased by features including a) well-preserved deltaic remnants in an otherwise cold and arid environment, present along the western flank of Jezero Crater, and b) the seasonal appearance of candidate recurring slope lineae throughout Martian equatorial, lower, and mid-latitudes as seen within both the Eos Chasma region and on the walls of Raga, Lohse, Rauna, and Tivat Craters. In this dissertation, I elucidate the role that geomorphic processes, whether aqueous or dry, have played in shaping both the ancient and contemporary Martian …
Assessment Of Fish Community Dynamics, Movement, And Morphology In Relation To Stream Barriers In The Upper Illinois Bayou Watershed, Risa Mccollough
Assessment Of Fish Community Dynamics, Movement, And Morphology In Relation To Stream Barriers In The Upper Illinois Bayou Watershed, Risa Mccollough
ATU Theses and Dissertations 2021 - Present
Intermittent streams are increasingly recognized as vital components of river networks by supporting dynamic fish communities shaped by variable hydrology and habitat connectivity. They are becoming increasingly vulnerable to fragmentation by anthropogenic activities, namely road crossings, dams, and climate shifts that intensify seasonal drying. In response, I conducted two studies in the Illinois Bayou watershed in Arkansas to assess the effects of fragmentation on fish community dynamics and morphology in intermittent streams.
In the first study, I examined temporal fish community dynamics across two barriers: a natural waterfall in Dare Creek and a low-water crossing in Dry Creek. Simultaneously, I …
Improving The Electrochemical Properties Of Mno2 By Doping With Fe For Water Splitting And Supercapacitor Application, Joseph Okwe
Improving The Electrochemical Properties Of Mno2 By Doping With Fe For Water Splitting And Supercapacitor Application, Joseph Okwe
Electronic Theses & Dissertations
An Abstract of the Thesis by
Joseph Okwe
These days when the issue of energy is talked about, it is usually more than just the usefulness of different types of energy. This topic now encompasses ways of generating and storing energy in the most efficient and sustainable way. For this reason, various research has shown that materials that are fabricated for the purpose of energy storage and conversion also find applications in other areas such as water splitting and supercapacitors. And so certain materials, when synthesized, can serve more than one purpose in either generating or storing energy. This project …
Dense Temporary Array Investigation Of Jemez Uplift Seismicity, Jillian D. Podmore
Dense Temporary Array Investigation Of Jemez Uplift Seismicity, Jillian D. Podmore
Earth and Planetary Sciences ETDs
A protracted multi-stage tectonic and magmatic evolution combined with low regional crustal strain rates make it challenging to characterize active structure that may host earthquakes in the Jemez Mountains of New Mexico. Here, we leverage temporary 1-month deployments of nodal seismometers to gain new insights into seismicity of the Jemez Mountains, which only have continuous seismic monitoring on their eastern flank as a result of the Los Alamos Seismic Network. Our catalog is built using 4 steps: phase picking in continuous seismic data, association of picks to detect unique events, event magnitude estimation, and absolute hypocenter estimation. We detect and …
Seismological Investigations Of Magmatic Systems Using Dense Nodal Arrays, Wenkai Song
Seismological Investigations Of Magmatic Systems Using Dense Nodal Arrays, Wenkai Song
Earth and Planetary Sciences ETDs
Understanding the internal architecture of magmatic systems is crucial for volcanology, yet conventional geophysical techniques often lack the resolution to image their fine-scale structures. This dissertation leverages unique datasets from dense nodal arrays to investigate the upper crustal magmatic systems beneath Yellowstone Caldera, Valles Caldera, and Mount St. Helens. At Yellowstone, I processed vibroseis data to delineate the top of the modern magma reservoir and evaluate the thermal connection between the magmatic and the overlying hydrothermal systems. At Valles, 3D radial seismic anisotropy imaging reveals strong positive radial anisotropy within the reservoir, indicating an organized structure of horizontally sill-like melt …
Kakeya Sets Over The Heisenberg Group, Gabriel Jacob Gress
Kakeya Sets Over The Heisenberg Group, Gabriel Jacob Gress
Mathematics & Statistics ETDs
The Hausdorff dimension of Kakeya sets is an interesting problem where the two-dimensional case can be proven directly, but even obtaining bounds on the higher dimension analogues can require highly technical machinery. The difficulty of the general case has inspired analysts to look at Kakeya sets from non-Euclidean viewpoints.
In this paper, we explore a construction of the Kakeya set in the first Heisenberg group H^1. By utilizing the sub-Riemannian manifold of H^1 we can apply tools in geometric measure theory which at this time cannot be applied in R^3. We restate and provide a detailed proof for a sharp …
On Sharpest Tail Bounds For Functions Of Tail Bounded Random Variables, Stephen Harrison
On Sharpest Tail Bounds For Functions Of Tail Bounded Random Variables, Stephen Harrison
Mathematics & Statistics ETDs
Consider n real/complex, independent/dependent random variables with respective tail bounds and g a measurable function of the r.v.’s. Consider f the “sharpest” tail bound of g (sharpest in the sense, if f were any less, then for some X1, ..., Xn satisfying the conditions, g(X1, ..., Xn) would not satisfy the tail f). Significant research has been done to approximate f often with high accuracy. These results are often of the form, for g in this family, and tail bounds of Xk in this family, f is bounded by some f′ with high accuracy. However, the question “what would it …
Modeling Mineral Redistribution In Biological Tissue Using Apple As An In Vitro Analogue, Daler Djuraev, Ali Algemsh, Halima Alazeb, Zeenia Ahmed
Modeling Mineral Redistribution In Biological Tissue Using Apple As An In Vitro Analogue, Daler Djuraev, Ali Algemsh, Halima Alazeb, Zeenia Ahmed
Publications and Research
This project aims to model mineral (ion) redistribution that occurs in human soft tissue after injury or mechanical/thermal stress. Because direct, repeatable in vivo measurements are difficult, we use apples as an in vitro analogue: their mineral content is relatively uniform and the tissue can be cut, dried, and repeatedly imaged under controlled conditions. Using X-ray imaging, we tracked how minerals in apple tissue move toward damaged regions immediately after cutting, and how subsequent drying at room temperature drives a redistribution toward the central core. We also observed that biological degradation (decay) alters mineral density over time, indicating that even …
A Bump Hunting Approach To Finding Interpretable Data Pockets, Tushar Ojha
A Bump Hunting Approach To Finding Interpretable Data Pockets, Tushar Ojha
Electrical and Computer Engineering ETDs
This dissertation approaches the problem of extracting simple interpretations from local regions of data. This is sometimes called bump hunting because the local regions of interest have a high concentration of a particular output value. This work develops a bump hunting method for discrete-valued tabular data where each bump is modeled by a rectangular region of the input data space so its rule-based description admits a simple logical interpretation that can inform decisions. This method is designed for labeled data where each input feature has a distinct meaning that may or may not be related to the output, and the …
Health Implications Of Heavy Metal Contamination In Commercially Available Deodorant And Antiperspirant Products Sold In Benghazi, Libya, Maysson Yaghi, Khaled Elsherif
Health Implications Of Heavy Metal Contamination In Commercially Available Deodorant And Antiperspirant Products Sold In Benghazi, Libya, Maysson Yaghi, Khaled Elsherif
Al-Bahir
The extensive usage of deodorants and antiperspirants raises concerns about the potential health risks posed by heavy metal content. This study quantified the levels of five heavy metals: Aluminum, Zirconium, Lead, Cadmium, and Chromium in 22 commercial products widely used in Benghazi, Libya, and assessed the associated health risks. Samples, categorized into gel, stick, and roll-on formulations, were analyzed using iCAP TQ ICP-MS. Al and Zr showed the widest concentration ranges, reflecting their intentional use as active ingredients. Al levels ranged from trace amounts (0.032 mg/kg) up to a maximum of 99.10 mg/kg, while Zr was found exclusively in gel …
Adapting Master’S-Level Chemistry Education In The United States: Insights From Industry, Academia, And The Literature, Brian Johnson, Amanda Lindell, Nina M. Goodey
Adapting Master’S-Level Chemistry Education In The United States: Insights From Industry, Academia, And The Literature, Brian Johnson, Amanda Lindell, Nina M. Goodey
Department of Chemistry and Biochemistry Faculty Scholarship and Creative Works
As the chemical industry evolves in response to technological and global challenges, Master’s-level chemistry programs must adapt to prepare graduates for workforce success. This article explores how such programs can better integrate professional skills such as communication, collaboration, and research. Drawing on literature and stakeholder interviews from a review of the Chemistry M.S. and Pharmaceutical Biochemistry M.S. programs at Montclair State University, a Hispanic Serving Institution in New Jersey’s pharmaceutical hub, we identified four key themes: the importance of hands-on research experiences, the integration of professional skills development, the need for flexible course and credit requirements, and the challenges of …
Decarbonizing California Wine: Navigating Scope 3 Emissions Challenges And Opportunities, Olivia Regalia
Decarbonizing California Wine: Navigating Scope 3 Emissions Challenges And Opportunities, Olivia Regalia
Master's Projects and Capstones
Climate change is already impacting the California wine industry through increases in extreme weather, such as prolonged heatwaves and atmospheric rivers. For the industry to survive, it is important for California wineries to mitigate the effects of climate change and adapt to current and future impacts. Scope 3 greenhouse gas emissions (i.e., emissions generated throughout the supply chain) from glass packaging make up 29% of a typical California winery's carbon footprint, representing both the largest Scope 3 climate impact and greatest opportunity for reductions. This research examined key factors shaping California wineries’ Scope 3 emissions reductions efforts. A mixed-methods approach …
Microbial Metabolism Amplified Warming In Three Phanerozoic Hyperthermal Events, Yuyang Wu, Haijun Song, Daoliang Chu, Ying Cui, Jacopo Dal Corso, Genming Luo, Huyue Song, Li Tian, Hanchen Song, Enhao Jia, Jinnan Tong
Microbial Metabolism Amplified Warming In Three Phanerozoic Hyperthermal Events, Yuyang Wu, Haijun Song, Daoliang Chu, Ying Cui, Jacopo Dal Corso, Genming Luo, Huyue Song, Li Tian, Hanchen Song, Enhao Jia, Jinnan Tong
Department of Earth and Environmental Studies Faculty Scholarship and Creative Works
The ocean’s biological carbon pump (BCP) plays a crucial role in climate regulation by facilitating long-term removal of atmospheric CO2. However, BCP changes during past hyperthermals remain poorly understood. Here we use the vertical carbon isotope (δ13C) gradients between surface and mid-waters to trace the BCP changes during the Permian−Triassic, early Toarcian, and Palaeocene−Eocene hyperthermals, detecting a two- to three-fold increase in the vertical δ13C gradients. We found that enhanced organic matter remineralization, driven by increased microbial respiration under warming, are the primary trigger for increased vertical δ13C gradients. Warming-induced enhancements in microbial metabolism caused a two- to six-fold reduction …
Developing An Ai-Assisted Grading System Using Large Language Models, Andrei Modiga
Developing An Ai-Assisted Grading System Using Large Language Models, Andrei Modiga
MS in Computer Science Project Reports
We present a grading system that accelerates evaluation of open-ended student work across scanned and digital workflows. The system crops answer regions from PDFs, assigns submissions via OCR on identity regions only, and groups answers by visual semantics using a vision LLM. Instructors review and edit groups, apply rubric items once per group, and export grades from an on-screen table. The solution integrates Ghostscript rasterization, PdfPig page orchestration, SkiaSharp region extraction, Tesseract identity OCR, and GPT-4o Vision for grouping. We detail the architecture, token-budgeted batching strategy, and persistence design, then describe testing results for grouping quality, time-on-task, and usability. The …
Flooding Behavior Near The Us/Canada Border: Complications And Approaches, Maria T. Dodson
Flooding Behavior Near The Us/Canada Border: Complications And Approaches, Maria T. Dodson
Honors College Theses
Flood forecasting remains a major challenge due to the nonlinear nature of hydrological systems and uncertainties in environmental data. This study aimed to address the prevalent challenges that arise from forecasting flooding behavior. To address the inherent complexity of hydrological forecasting, a machine learning framework was developed and trained on major contributing factors. To achieve an optimal balance between computational efficiency and predictive performance, a Gated Recurrent Unit (GRU) was selected as the optimal machine learning model. As the chosen dataset, North American Land Data Assimilation System Phase 2 (NLDAS2), is known to have inaccuracies in the important feature Relative …
Application Of Augmented Reality Technology As A Dietary Monitoring And Control Measure Among Adults: A Systematic Review, Gabrielle Victoria Gonzalez, Bingjing Mao, Ruxin Wang, Wen Liu, Chen Wang, Tung Sung Tseng
Application Of Augmented Reality Technology As A Dietary Monitoring And Control Measure Among Adults: A Systematic Review, Gabrielle Victoria Gonzalez, Bingjing Mao, Ruxin Wang, Wen Liu, Chen Wang, Tung Sung Tseng
School of Public Health Faculty Publications
Background/Objectives: Traditional dietary monitoring methods such as 24 h recalls rely on self-report, leading to recall bias and underreporting. Similarly, dietary control approaches, including portion control and calorie restriction, depend on user accuracy and consistency. Augmented reality (AR) offers a promising alternative for improving dietary monitoring and control by enhancing engagement, feedback accuracy, and user learning. This systematic review aimed to examine how AR technologies are implemented to support dietary monitoring and control and to evaluate their usability and effectiveness among adults. Methods: A systematic search of PubMed, CINAHL, and Embase identified studies published between 2000 and 2025 that evaluated …
Mississippi River Pre-Loess Terrace Deposits: Distribution Of Aggregate Resources, Jonathan Leard
Mississippi River Pre-Loess Terrace Deposits: Distribution Of Aggregate Resources, Jonathan Leard
Theses and Dissertations
Pre-loess Terrace Deposits are a Pleistocene, high-quality aggregate resource of gravel, sand, and clay subjacent to loess of varying thickness along the eastern valley wall of the Yazoo Basin in Mississippi. This project delineated 1,230 mi2 of this resource with a volume greater than 33 billion yd3 from the misinterpreted Citronelle Formation in Desoto, Tate, Marshall, Panola, Tallahatchie, Yalobusha, Grenada, Carroll, Holmes, Yazoo, Madison, Hinds, Warren, Jefferson, Claiborne, Adams, Franklin, and Wilkinson Counties with nine terrace base levels at 40, 180, 220, 250, 270, 300, 330, 340, and 370 feet msl indicated by test holes, gravel mine data, outcrop studies, …
Spectral Methods And Wavelets In Quantitative Finance Problems, Davood Damircheli
Spectral Methods And Wavelets In Quantitative Finance Problems, Davood Damircheli
Theses and Dissertations
This dissertation leverages advanced spectral methods and wavelet techniques to address complex quantitative finance models, enhancing the computation of financial derivatives and risk assessments. Building on foundational studies, this research extends these methods to broader, intricate financial contexts. The first section explores fractional-order generalized Chebyshev wavelets (FOCW) applied to fractional advection equations, relevant in both mathematics and physics. Using a regularized beta function to compute the Riemann-Liouville fractional integral operator, this study introduces a novel numerical scheme with robust accuracy, confirmed through error analysis and empirical tests. The second part examines the fractional Black-Scholes equations for option pricing under subdiffusive …
Impacts Of Upgrading Gcc On The Srtuner Compiler Autotuning Algorithm, Jonathan D. Butterfield
Impacts Of Upgrading Gcc On The Srtuner Compiler Autotuning Algorithm, Jonathan D. Butterfield
Theses and Dissertations
An often-overlooked research gap is the applicability of research over time. The impact of updating the GNU Compiler Collection version was investigated for the SRTuner compiler optimization research. Versions 7 through 14 were tested using documented flags and recommended flag dependencies. Quality controls measured and enforced consistency across test runs and benchmarks. The performance of SRTuner was compared to a random control while the impact of enforcing flag dependencies was evaluated. The most influential flags were investigated by turning them off in isolation, but results were mixed. It was determined that enforcing flag dependencies resulted in improved performance, but the …
Rapid Kinetic Fluorogenic Quantification Of Malondialdehyde In Ground Beef, Keshav Raj Bhandari
Rapid Kinetic Fluorogenic Quantification Of Malondialdehyde In Ground Beef, Keshav Raj Bhandari
Theses and Dissertations
Presented herein is rapid kinetic fluorogenic method to quantify malondialdehyde (MDA) in ground beef, utilizing 2-thiobarbituric acid (TBA) as the fluorogenic probe. This assay significantly shortens the total analysis time, from sample preparation to data acquisition, to just six minutes presenting a major advancement over traditional methods that typically require two hours and multiple instruments. The assay’s robustness against matrix interferences was validated using sample volume variation and standard addition calibration methods. Additionally, the effects of ambient exposure to air, washing, and cooking on MDA content in raw ground beef were quantified. While both ambient exposure to air and cooking …
Polyminhash: Efficient Area-Based Minhashing Of Polygons For Approximate Nearest Neighbor Search, Alima Subedi, Sankalpa Pokharel, Satish Puri
Polyminhash: Efficient Area-Based Minhashing Of Polygons For Approximate Nearest Neighbor Search, Alima Subedi, Sankalpa Pokharel, Satish Puri
Computer Science Faculty Research & Creative Works
Similarity searches are a critical task in data mining. As datasets grow larger, exact nearest neighbor searches quickly become unfeasible, leading to the adoption of approximate nearest neighbor (ANN) searches. ANN has been studied for text data, images, and trajectories. However, there has been little effort to develop ANN systems for polygons in spatial database systems and geographic information systems. We present PolyMinHash, a system for approximate polygon similarity search that adapts MinHashing into a novel 2D polygon-hashing scheme to generate short, similarity-preserving signatures of input polygons. Minhash is generated by counting the number of randomly sampled points needed before …
A Trigger For The Autonomous Decommissioning Of Smart Devices, Ravindra Mangar, Jared Chandler, Jingyu Qian, Carl A. Gunter, Timothy J. Pierson, David Kotz
A Trigger For The Autonomous Decommissioning Of Smart Devices, Ravindra Mangar, Jared Chandler, Jingyu Qian, Carl A. Gunter, Timothy J. Pierson, David Kotz
Dartmouth Scholarship
Smart devices are ubiquitous in modern environments, yet their decommissioning phase remains poorly studied and often overlooked in system design. We define secure decommissioning as the process by which a smart device securely disconnects from its environment and makes sensitive data inaccessible. If not decommissioned, devices may retain sensitive information – such as security credentials or user-behavior data that could be recovered by an adversary. Unfortunately, some users may forget to decommission a device when they dispose or sell it, and cannot decommission a device that is lost or stolen. This paper investigates a trigger mechanism for individual wireless smart …
Toward A Unified Network Flow Framework: From Conservation Principles To Fluid Dynamics Models, Zonghan Zhang
Toward A Unified Network Flow Framework: From Conservation Principles To Fluid Dynamics Models, Zonghan Zhang
Theses and Dissertations
Network flows govern a wide range of critical systems, from tangible infrastructures like transportation and power grids to replicable processes such as information spread and epidemics. While tangible flows obey conservation laws and physical constraints, replicable flows, like rumors or viruses, can grow, decay, or vanish unpredictably. Despite their increasing interaction in real-world settings, these flow types are typically modeled in isolation, using disconnected mathematical frameworks. This dissertation presents a unified modeling approach that bridges the gap between conserved and replicable flows by embedding principles from fluid dynamics into graph-based propagation models. I introduce physically informed extensions to classical models, …
Modern Technology Addiction: Developer Duty Of Care, Jonah Hampton
Modern Technology Addiction: Developer Duty Of Care, Jonah Hampton
Honors College Theses
Technology addiction includes any frequent use of technology which interferes in the user’s life. The subject continues growth as an epidemic and research field, yet prior literature does not often analyze the role of technology developers. This study performs a literature and legal synthesis to evaluate user and company responsibility, implications of responsibility, and promising solutions. Post 2020 literature was selected for coverage on context, addictive features, effects, solutions, or perspectives on law. Legal examples from different addiction industries were also selected for analysis to understand previous precedents. The study found a pattern of addictive traits, persuasive design, and recurring …
The Effects Of Nanobubble Fertigation And Soil Conditioners To Improve Nutrient Dynamics, Soil Microbial Activity, And Chili Productivity, Betty Natalie Fitriatin, Euis Ahah Rokayah, Elsa Naila Elmyra, Tualar Simarmata, Nicky Oktav Fauziah, Hanif Fakhrurroja
The Effects Of Nanobubble Fertigation And Soil Conditioners To Improve Nutrient Dynamics, Soil Microbial Activity, And Chili Productivity, Betty Natalie Fitriatin, Euis Ahah Rokayah, Elsa Naila Elmyra, Tualar Simarmata, Nicky Oktav Fauziah, Hanif Fakhrurroja
Jurnal Kultivasi
Drip fertigation is a fertilization method that integrates nutrient delivery with an irrigation system, which is capable of optimizing the direct delivery of nutrients to the root zone. This experiment aims to investigate the effect of drip fertigation with nanobubble technology, and soil conditioners on the population of Phosphate-Solubilizing Bacteria (PSB) and Azotobacter spp., available phosphorus, total nitrogen, growth, and yield of red chili. The study used a Strip Plot Design with two factors and three replications. The first factor was nutrient application (solid NPK fertilizing as control; drip fertigation; and drip fertigation with nanobubble technology), and the second factor …
Constructing Genotype And Phenotype Network Helps Reveal Disease Heritability And Phenome-Wide Association Studies, Xuewei Cao, Lirong Zhu, Xiaoyu Liang, Shuanglin Zhang, Qiuying Sha
Constructing Genotype And Phenotype Network Helps Reveal Disease Heritability And Phenome-Wide Association Studies, Xuewei Cao, Lirong Zhu, Xiaoyu Liang, Shuanglin Zhang, Qiuying Sha
Michigan Tech Publications
Background
Analyses of a bipartite Genotype and Phenotype Network (GPN), linking the genetic variants and phenotypes based on statistical associations, provide an integrative approach to elucidate the complexities of genetic relationships across diseases and identify pleiotropic loci. In this study, we assess contributions to constructing a well-defined GPN with a clear representation of genetic associations by comparing the network properties with a random network, including connectivity, centrality, and community structure. Then, we extend our discussion to include two applications of bipartite GPN in disease heritability enrichment analysis and phenome-wide association studies (PheWAS).
Results
We construct network topology annotations of genetic …