Physical Sciences and Mathematics Commons^™

Molca: Molecular Graph-Language Modeling With Cross-Modal Projector And Uni-Modal Adapter, Zhiyuan Liu, Sihang Li, Yanchen Luo, Hao Fei, Yixin Cao, Kenji Kawaguchi, Xiang Wang, Tat-Seng Chua

Research Collection School Of Computing and Information Systems

Language Models (LMs) have demonstrated impressive molecule understanding ability on various 1D text-related tasks. However, they inherently lack 2D graph perception — a critical ability of human professionals in comprehending molecules’ topological structures. To bridge this gap, we propose MolCA: Molecular Graph-Language Modeling with Cross-Modal Projector and Uni-Modal Adapter. MolCA enables an LM (i.e., Galactica) to understand both text- and graph-based molecular contents via the cross-modal projector. Specifically, the cross-modal projector is implemented as a QFormer to connect a graph encoder’s representation space and an LM’s text space. Further, MolCA employs a uni-modal adapter (i.e., LoRA) for the LM’s efficient …

A Poisson-Based Distribution Learning Framework For Short-Term Prediction Of Food Delivery Demand Ranges, Jian Liang, Jintao Ke, Hai Wang, Hongbo Ye, Jinjun Tang

Research Collection School Of Computing and Information Systems

The COVID-19 pandemic has caused a dramatic change in the demand composition of restaurants and, at the same time, catalyzed on-demand food delivery (OFD) services—such as DoorDash, Grubhub, and Uber Eats—to a large extent. With massive amounts of data on customers, drivers, and merchants, OFD platforms can achieve higher efficiency with better strategic and operational decisions; these include dynamic pricing, order bundling and dispatching, and driver relocation. Some of these decisions, and especially proactive decisions in real time, rely on accurate and reliable short-term predictions of demand ranges or distributions. In this paper, we develop a Poisson-based distribution prediction (PDP) …

Explorelah: Personalised And Smart Trip Planner For Mobile Tourism, Aldy Gunawan, Siu Loon Hoe, Xun Yi Lim, Linh Chi Tran, Dang Viet Anh Nguyen

Research Collection School Of Computing and Information Systems

Various recommender systems for mobile tourism have been developed over the years. However, most of these recommender systems tend to overwhelm users with too much information and may not be personalised to user preferences. In this paper, we introduce ExploreLah, a personalised and smart trip planner for exploring Point of Interests (POIs) in Singapore. The user preferences are categorised into five groups: shopping, art & culture, outdoor activity, adventure, and nightlife. The problem is considered as the Team Orienteering Problem with Time Windows. The algorithm is developed to generate itineraries. Simulated experiments using test cases were performed to evaluate and …

M2-Cnn: A Macro-Micro Model For Taxi Demand Prediction, Shih-Fen Cheng, Prabod Manuranga Rathnayaka Mudiyanselage

Research Collection School Of Computing and Information Systems

In this paper, we introduce a macro-micro model for predicting taxi demands. Our model is a composite deep learning model that integrates multiple views. Our network design specifically incorporates the spatial and temporal dependency of taxi or ride-hailing demand, unlike previous papers that also utilize deep learning models. In addition, we propose a hybrid of Long Short-Term Memory Networks and Temporal Convolutional Networks that incorporates real world time series with long sequences. Finally, we introduce a microscopic component that attempts to extract insights revealed by roaming vacant taxis. In our study, we demonstrate that our approach is competitive against a …

Interoperability In Blockchain: A Survey, Kunpeng Ren, Nhut-Minh Ho, Dumitrel Loghin, Thanh-Toan Nguyen, Beng Chin Ooi, Quang-Trung Ta, Feida Zhu

Research Collection School Of Computing and Information Systems

This paper presents a systematic and comprehensive survey on blockchain interoperability, where interoperability is defined as the ability of blockchains to flexibly transfer assets, share data, and invoke smart contracts across a mix of public, private, and consortium blockchains without any changes to the underlying blockchain systems. Analyzing the vast landscape of both research papers and industry projects, we classify the existing works into five categories, namely, (1) sidechains, (2) notary schemes, (3) hashed time lock contracts (HTLC), (4) relays, and (5) blockchain agnostic protocols. We analyze the existing works under a taxonomy that consists of system and safety characteristics, …

Security Compliance And Work-Issued Mobile Devices: Out Of Sight, Out Of Mind?, Kent Marett, Shan Xiao, Sumin Kim

Business and Information Technology Faculty Research & Creative Works

For security, economic, and efficiency reasons, many businesses supply mobile devices to employees to use both in the workplace and remotely, accompanied by policies governing their appropriate use. Extant research has shown that work-issued mobile devices can disrupt employees' perceptions of work-life balance (WLB) and, indeed, WLB can impact employees' job satisfaction and performance. The global COVID-19 pandemic meant that more employees than usual performed their work remotely, but this situation may have not fit the preferred WLB for some. Did this encroachment mean that appropriate use policies were forgotten? We conducted two rounds of surveys, one pre-pandemic and the …

Cyber-Informed Engineering Of Industrial Control Systems By Prioritization Of High Consequence Events, Conflict Clause Learning Technique, And Autotuning Mechanisms For The Real-Time Monitoring Of Critical Processes, Chidi Ugo Agbo

Boise State University Theses and Dissertations

Industrial Control Systems (ICS) are systems employed to supervise, regulate, and control industrial processes and critical infrastructure. These critical systems require robust measures to protect them against potential safety and security violations. Ensuring the safety and security of ICS is a significant challenge facing nations and states today, necessitating the development of robust, dependable, and resilient ICS. Traditional cybersecurity and engineering practices continue to adopt an inefficient approach that treats security as an add-on element during the system design and development. In response, this dissertation builds on a novel theoretical approach known as Cyber-Informed Engineering (CIE) that leverages safety and …

Social Network Analysis Of A Biomedical Research Co-Authorship Network, Amrina Ferdous

Boise State University Theses and Dissertations

A social network analysis (SNA) is a graph-based method for visualizing social networks. Our study uses the SNA to analyze co-authorship patterns in National Institutes of Health (NIH) - Centers of Biomedical Research Excellence (COBRE), Idaho Institutional Development Award (IDeA), Network of Biomedical Research Excellence (INBRE), and Biomedical Research Infrastructure Network (BRIN) grants between 2001 and 2022. It is of interest to us to analyze the growth and expansion of research over time to look at the social networks of research Hubs, the social networks of potential research Hubs in the near future, and the social networks of potential leaders …

Automated Materials Spectroscopy And Topology Optimizations Using Genetic Algorithms, Miu Lun Lau

Boise State University Theses and Dissertations

This dissertation will focus on the implementation and development of genetic algorithm software for increasing the productivity and analysis rate for spectrum analysis, topology optimization, and others. The software artifacts generated have resulted in a basic software framework called Neo. The framework has been further developed into different software for specific spectra methods such as EXAFS, Astrophysics, Nano-Indentation, and many more.

For GA implementation that relates to EXAFS, we have demonstrated the usage of GA to correctly identify chemical species presented, for Copper metal species, Technetium compounds, and in-situ of SnS2 batteries. The software artifact was able to generate accurate …

Improving Security Of Order-Preserving Encryption And Its Applications In Data Outsourcing, Ning Shen

Boise State University Theses and Dissertations

Encryption is an important tool to protect data confidentiality and privacy. One important practice of computation primitives is encrypting data with Order-Preserving Encryption (OPE). Order-Preserving Encryption is an encryption algorithm that allows the ciphertexts to preserve the same order of plaintext and it is very useful for range queries in databases and other applications. However, OPE has certain security vulnerabilities, such as it may leak sensitive information other than the ordering. Currently, the application of OPE is also limited, which is primarily used in the encryption of outsourced databases.

Due to the OPE’s security concern and limited usage, this dissertation …

On Hierarchical Clustering-Based Approach For Rddbs Design, Hassan I. Abdalla, Ali A. Amer, Sri Devi Ravana

All Works

Distributed database system (DDBS) design is still an open challenge even after decades of research, especially in a dynamic network setting. Hence, to meet the demands of high-speed data gathering and for the management and preservation of huge systems, it is important to construct a distributed database for real-time data storage. Incidentally, some fragmentation schemes, such as horizontal, vertical, and hybrid, are widely used for DDBS design. At the same time, data allocation could not be done without first physically fragmenting the data because the fragmentation process is the foundation of the DDBS design. Extensive research have been conducted to …

Software Jimenae Allows Efficient Dynamic Simulations Of Boolean Networks, Centrality And System State Analysis, Martin Kaltdorf, Tim Breitenbach, Stefan Karl, Maximilian Fuchs, David Komla Kessie, Eric Psota, Martina Prelog, Edita Sarukhanyan, Regina Ebert, Franz Jakob, Gudrun Dandekar, Muhammad Naseem, Chunguang Liang, Thomas Dandekar

All Works

The signal modelling framework JimenaE simulates dynamically Boolean networks. In contrast to SQUAD, there is systematic and not just heuristic calculation of all system states. These specific features are not present in CellNetAnalyzer and BoolNet. JimenaE is an expert extension of Jimena, with new optimized code, network conversion into different formats, rapid convergence both for system state calculation as well as for all three network centralities. It allows higher accuracy in determining network states and allows to dissect networks and identification of network control type and amount for each protein with high accuracy. Biological examples demonstrate this: (i) High plasticity …

Security Analysis Of Holystone Drones: Examining Attack Vectors And Data Extraction Techniques, Sandesh Ambadas More

Theses and Dissertations

In recent years, the surge in popularity of small-scale Unmanned Aerial Vehicles (UAVs), especially Holy Stone models, has raised significant security concerns. This study examines specific Holy Stone drone models, including the HS 175D, HS 430, HS 360S, and HS720, focusing on sub-250g drones exempt from FAA registration and those requiring registration and Remote ID. Despite advancements in drone technology, our research reveals persistent vulnerabilities that could be exploited by malicious actors for illicit purposes, posing a substantial security risk. Our comprehensive analysis involved simulated attacks in identifying and exploiting these vulnerabilities, leading to the successful acquisition of flight logs, …

Twitter Policing, Hemanth Kumar Medisetty

Electronic Theses, Projects, and Dissertations

Police departments are frequently utilizing social media platforms to actively interact with the public. Social media offers an opportunity to share information, facilitate communication, and foster stronger connections between police departments and the communities they serve. In this context sentiment analysis of social media data has become a tool, for identifying sentiments and tracking emerging trends.

This project utilizes sentiment analysis to examine the social media interactions with particular data obtained from the Twitter (X). Initially, the project gathers social media data, from twitter mentioned accounts on Twitter utilizing web scraping techniques. Afterwards, we perform a thorough sentiment analysis using …

A Mathematical App For The Conceptual Understanding Of Area And Perimeter, Jumela F. Sarmiento, Debbie Marie B. Verzosa, Maria Alva Q. Aberin, Ma. Louise Antonette De Las Penas, Agnes D. Garciano, Juan Carlo F. Mallari, Mark Anthony C. Tolentino

Mathematics Faculty Publications

This paper discusses an app that was developed to build a strong understanding of the concepts of area and perimeter in students. An important feature of the app is the three-component feature which highlights progressive learning: Explore, designed for the learning of the conceptual understanding of area and perimeter; Apply, where area and perimeter concepts are applied; and Create intended for constructing representations to develop higher order thinking skills. The pedagogical basis for the creation of the app, the game design elements employed in the app as well as the integration of the app in the classroom will be presented.

A Visualization App On Proving Geometric Concepts, Ma. Louise Antonette N. De Las Peñas, Debbie Marie B. Verzosa, Maria Alva Q. Aberin, Agnes D. Garciano, Jumela F. Sarmiento, Mark Anthony C. Tolentino, Juan Carlo F. Mallari

Mathematics Faculty Publications

This paper discusses the description, design and pedagogical basis of a mathematical app called Two Column Proof which provides students a framework for writing proofs of geometric statements. The app focuses on proving concepts on: properties of parallelograms, conditions that determine when a quadrilateral is a parallelogram, properties on trapezoids and kites for high school mathematics. It employs visual representations for students to understand the statement or reason of each given line in the proof, strengthening their logical and mathematical knowledge needed in the proof construction.

Design Of A Mobile App To Promote Understanding And Fluency In Finding The Equation Of A Line, Agnes D. Garciano, Maria Alva Q. Aberin, Ma Louise Antonette N. Delaspeñas, Juan Carlo F. Mallari, Jumela F. Sarmiento, Mark Anthony C. Tolentino, Debbie Marie B. Verzosa

Mathematics Faculty Publications

This paper focuses on the design of a mobile app called Pick or Fish that fosters comprehension and mastery of the concepts of slopes, y-intercepts and equations of lines. The app's pedagogical value lies in its potential to help students understand and become proficient in these concepts. The app is suitable for use on low-cost mobile devices. It functions within an engaging game-like setting featuring visual elements that enable students to see the effect of parameter changes on the direction of a line. The beginner and advanced levels of the app have scaffolding features that gradually introduce the students to …

A Multi-Channel Search For Signatures Of Ev2-Scale Sterile Neutrinos In Icecube, Benjamin Randolph Smithers

Physics Dissertations - Archive

The IceCube Neutrino Observatory is a cubic-kilometer-scale neutrino observatory built using a gigaton of instrumented ice near the Amundsen-Scott South Pole Station in Antarctica; it measures the Cherenkov light emitted by the daughter particles of deep inelastic scattering interactions occurring inside and around the detector from neutrinos of both astrophysical and atmospheric origin. For eV2-scale sterile neutrino models, matter-effects can yield resonant muon antineutrino to sterile oscillations for TeV-scale up-going neutrinos. For certain combinations of mixing angles, this is expected to yield resonant muon antineutrino to tau antineutrino oscillations at the same energies and angles as the muon neutrino disappearance. …

Measurement, Modeling, And Analysis Of The Energy Spectra Of Electrons And Annihilation Gammas Resulting From Low Energy Positron Irradiation Of Clean And Adsorbate Covered Surfaces, Sima Lotfimarangloo

Physics Dissertations - Archive

This dissertation presents measurements and theoretical modeling demonstrating the capability of Doppler Broadened annihilation gamma Spectroscopy (DBS) to provide element-specific information from the topmost atomic layer of surfaces that are either clean or covered with adsorbates or thin films. Our measurements show that the energy spectra of Doppler-shifted annihilation gamma photons emitted following the annihilation of positrons from the topmost atomic layers of clean gold (Au) and copper (Cu) differ significantly. With the aid of the positron annihilation-induced Auger electron spectroscopy (PAES) performed simultaneously with DBS, we show that measurable differences between the Doppler broadened gamma spectra from Au and …

Thin Film Piezoelectric Energy Harvesting Nanostructured Materials: Tailoring Size, Porosity, Morphology Of Zinc Stannate Perovskites (Abx3), Christopher Munoz

Theses and Dissertations

Three dimensional (3D) piezoelectric zinc stannate (ZnSnO3) nanoweb arrays are synthesized using a combination of treatment methods deposited in PDMS thin films for electrochemical analysis of its piezoelectric response. Advantages of hydrothermal, molten salt, and solvothermal synthesis methods were leveraged to facilitate several chemical and surface engineering techniques. The combination of these treatments reduce the size of zinc stannate to approximately ~40nm-80nm weblike networks, much smaller than previously reported ZnSnO3 sub-micro cubes. Scanning electron microscopy (SEM) and X-Ray Diffraction (XRD) analysis reveal a mesoporous protonated tristannate (H2Sn3O7) nanoweb template with connecting wirelike strands having diameters ranging from 12-27nm across and …

Electrolysis Degradation Of Cyanuric Acid In Wastewater At Cu/Go Cathodes, Chioma Chinwe Nwakanobi

Theses and Dissertations

This work evaluates the development of electrochemical processes for the oxidative degradation of persistent organic chemicals in waste waters, specifically the oxidation of cyanuric acid in the presence of NaCl at Cu/GO cathodes and Ti anodes. The experiment used a graphene oxide doped copper mesh cathode to examine different concentrations of cyanuric acid (30 mg/L, 40 mg/L, and 50 mg/L) and various concentrations of NaCl electrolyte (0.007mol/L, 0.03mol/L, 0.07mol/L, 0.1mol/L, and 0.2mol/L). In addition, the effect of pH (2, 4, 6, and 8), and applied current (0.200A, 0.150A and 0.100A) were studied. The Cu/GO electrode played a central role in …

Enhancing Time Series Hashing Performance Via Deep Orthogonal Hashing, Mahmudul Hasan Robin

Theses and Dissertations

Deep hashing has been widely used for efficient retrieval and classification of high-dimensional data like images and text. However, its application to time series data is still challenging due to the data’s temporal nature. To tackle this issue, a new deep hashing method has been proposed that generates efficient hash codes and enhances the time series hashing performance using a ResNet model with Orthohash (Cosine Similarity Loss). The proposed method uses one loss architecture while using ResNet model for efficient hashing. It uses the Character Trajectories dataset to extract discriminative features from the time series data. These features are then …

Robust And Uncertainty-Aware Image Classification Using Bayesian Vision Transformer Model, Fazlur Rahman Bin Karim

Theses and Dissertations

Transformer Neural Networks have emerged as the predominant architecture for addressing a wide range of Natural Language Processing (NLP) applications such as machine translation, speech recognition, sentiment analysis, text anomaly detection, etc. This noteworthy achievement of Transformer Neural Networks in the NLP field has sparked a growing interest in integrating and utilizing Transformer models in computer vision tasks. The Vision Transformer (ViT) model efficiently captures long-range dependencies by employing a self-attention mechanism to transform different image data into meaningful, significant representations. Recently, the Vision Transformer (ViT) has exhibited incredible performance in solving image classification problems by utilizing ViT models, thereby …

Strategies Community College Mexican American Adult College Algebra Students Use When Graphing Function Transformations, Roxana Pamela Jimenez

Theses and Dissertations

This qualitative case study pursued to describe the different strategies Mexican American adult students in a local community college used to graph function transformations. Participants in the study were purposefully selected using a criterion sampling to ensure participants were atypical, above average students between the ages 18-22, and had a final course average of 89.5-100 in College Algebra. Three research questions were examined 1) In what ways do Mexican American adult college students graph a function transformation? 2) Which strategies do students implement when graphing a function transformation? Qualitative research methods using think aloud semi-structured interviews were used in this …

A Combinatorial Proof Of Supercranks For Partitions With A Fixed Number Of Parts, Jacob J. Gutierrez

Theses and Dissertations

In a previous paper by Eichhorn and Kronholm, a selection of supercranks for p(n,m) was established by generating functions. In this paper we will reprove this result with combinatorial witnesses for the selection of supercranks via integer lattice points.

Attitudes Towards Mathematics Of Developmental Mathematics Students In A Community College, Benjamin Ortiz

Theses and Dissertations

Reformations to developmental mathematics aim to remove barriers for students entering higher education. Challenges like costly multi-course sequences and high failure rates prohibit students’ access to college-level math courses and prevent degree or certification completion. Understanding factors that foster student success is critical to increase student success. This study focuses on students’ attitudes towards mathematics, utilizing the novice-expert continuum through Code et al.’s Mathematical Attitude and Perceptions Survey (MAPS) instrument. Student expertise scores, including all MAPS dimensions and specific dimension scores, were assigned. Kruskal-Wallis Rank-Sum tests identified differences in student populations by course and attitude dimension. …

Case Studies Of Algebra 1 Teachers Selection And Implementation Of Mathematics Tasks Toward Situated Learning, Luis Román Sauceda

Theses and Dissertations

Mathematical tasks are vital in active learning, especially in situated learning. Adequate selection and appropriate implementation of tasks are steps toward success in engaging students for active learning. This study explored how a professional development (PD) workshop influences teacher participants’ capabilities in selecting, redesigning, implementing, and reflecting on mathematical tasks to promote situated and active learning. The teacher participants were Algebra 1 teachers from a South Texas secondary school. During the workshop, participants developed and implemented activities after being shown situated learning strategies to promote student-centered learning. They were required to design hypothetical dialogues to simulate their class practice before …

An Automatic Solver For Optimal Control Problems, Marcel Efren Benitez

Theses and Dissertations

Optimal control theory is a study that is used to find a control for a dynamical system over a period of time such that a objection function is optimized. In this study we will be looking at optimal control problems for ordinary differential equations or ODEs and see that we can use an automatic solver using the forward-backward sweep using Matlab to solve for them from an 1 dimension to bounded cases and to nth dimension cases.

Mathematical Evaluation Of Ulnar Nerve Somatosensory Evoked Potentials (Sseps), Maribel Carmen Gomez

Theses and Dissertations

As the number of individuals suffering with low back and neck pain rises, we find people undergoing spinal procedures more often. In means, of safeguarding the patient and their neurological structures during the procedure intraoperative neuro-physiological monitoring (I.O.M) has been more widely used amongst surgeons orthopedic and neuro alike. During these procedures, a modality widely used for both low back and neck surgery is somatosensory evoked potentials (SSEPs). The aim of neuro-technicians is to obtain a baseline waveform that can be considered present and reliable. When obtaining SSEPs the technician can encounter obstacles with ’noisy’ wave-forms due to …

Chemical And Biological Catalysis Using A Functionalized Fluorinated Phthalocyanine, Mary Chiọma Okorie

Seton Hall University Dissertations and Theses (ETDs)

Phthalocyanines, a class of photosensitizers that generate ¹O₂ using visible light, have been widely used in a variety of applications such as catalysis, solid-state materials, and photodynamic therapy. A 3^rd generation, namely functionalized fluorinated phthalocyanines, F₄₈H₇(COOH)PcMetal, containing a carboxylic acid “tail” allows the Pc to be anchored onto supports such as metal oxides, producing a new family of supported photocatalysts, F₄₈H₇(COOH)PcZn-Oxides.

These new materials photooxidize toxic thioethers mainly to less toxic sulfoxides using visible light and air, a genuine green chemistry pathway. The catalysts are robust and survive reactive …