Physical Sciences and Mathematics Commons^™

Ecosystem Drought Response Timescales From Thermal Emission Versus Shortwave Remote Sensing, Erika Andujar, Nir Krakauer, Chuixiang Yi, Felix Kogan

Publications and Research

Remote sensing is used for monitoring the impacts of meteorological drought on ecosystems, but few large-scale comparisons of the response timescale to drought of different vegetation remote sensing products are available. We correlated vegetation health products derived frompolar-orbiting radiometer observations with a meteorological drought indicator available at different aggregation timescales, the Standardized Precipitation Evapotranspiration Index (SPEI), to evaluate responses averaged globally and over latitude and biome.The remote sensing products are Vegetation Condition Index (VCI), which uses normalized difference vegetation index (NDVI) to identify plant stress, Temperature Condition Index (TCI), based on thermal emission as a measure of surface temperature, and …

Experiential Learning Opportunity (Elo) And Utilization Of Field-And-Data- Based Information Obtained Through The Infusion Of Technology: Highlights On Nasa Stem And Earth Science Curricula, Nazrul I. Khandaker, Matthew Khargie, Shuayb Siddiqu, Sol De Leon, Katina Singh, Newrence Wills, Krishna Mahibar

Publications and Research

There is a greater emphasis on hands-on involvement and critical thinking skills in the geosciences and other STEM fields to inspire and engage K- 16 students to value scientific content and enable them to discover the well-documented nature of the fundamental scientific principles needed to explain various earth science and other STEM-related core phenomena. NASA MAA curricula are ideal for engaging K1-16 students in this context, since grade-specific lesson plans open-up a plethora of pedagogically sound and relevant earth science activities. These include earth’s materials and properties, meteorites, robotics, hot air balloon, flight simulation, star gazing, material science, crystal growth, …

Raritan Formation (Upper Cretaceous), Long Island, New York: Sedimentological And Geochemical Assessment, Nazrul I. Khandaker, Arif Sikder, Stanley Schleifer, Xin-Chen Liu, Carlos E. Castano Londano, Joseph B. Mcgee Turner

Publications and Research

The lithology of the Upper Cretaceous Raritan Formation (RF) consists of two members: an upper clay member (Raritan clay) and a lower unit, the Lloyd Sand Member. RF is unconformably overlain by upper Pleistocene glacial deposits. The RF consists of stratified white, light- to dark-gray, and red beds and lenses of clay, silt, and sand; lignite and pyrite are common. Variegated, thin to thickly-bedded Lloyd sandstone (LS) is considered to be one of the extensive regional aquifers in Long Island and interpreted to be nearshore, fluvio-deltaic deposit. Proximity to fluvial axes and active deltaic lobes plays an important role in …

Further Study Of Garnet Xenocrysts In New York City Migmatites, Stanley Schleifer, Nazrul I. Khandaker

Publications and Research

The authors have previously published an article at the 2004 Geological Society of America Annual Meeting, Petrogenetic Significance of Garnets in the Bedrock of New York City, in which they suggested that the garnet xenocrysts observed in the quartzofeldspathic zones of the migmatites, so frequently seen both at the surface, and below the surface pursuant to the construction of the Manhattan portion of New york City Water Tunnel #3, were a refractory residue of the anatectic melting of the immediately surrounding schistose bedrock. Although the relatively high melting point temperature of garnet compared to other minerals in the surrounding …

The Impact Of Climate Change On Biodiversity In Nepal: Current Knowledge, Lacunae, And Opportunities, Aishwarya Bhattacharjee, Jose D. Anadon, David L. Lohnman, Tenzing Doleck, Tarendra Lakhankar, Bharat Babu Shrestha, Praseed Thapa, Durga Devkota, Sundar Tiwari, Ajay Jha, Mohan Siwakoti, Naba R. Devkota, Pramod K. Jha, Nir Y. Krakauer

Publications and Research

Nepal has an extreme altitudinal range from 60–8850m with heterogeneous topography and distinct climatic zones. The country is considered a biodiversity hotspot, with nearly a quarter of the land area located in protected areas. Nepal and the surrounding Himalayan region are particularly vulnerable to climate change because of their abrupt ecological and climatic transitions. Tens of millions of people rely on the region’s ecosystem services, and observed and modeled warming trends predict increased climate extremes in the Himalayas. To study the ecological impacts of climate change in Nepal and inform adaptation planning, we review the literature on past, present, and …

Assessment Of Differences Between Near-Surface Air And Soil Temperatures For Reliable Detection Of High-Latitude Freeze And Thaw States, Farjana Shati, Satya Prakash, Hamid Norouzi, Reginald Blake

Publications and Research

Near-surface air temperature and the underlying soil temperature are among the key components of the Earth’s surface energy budget, and they are important variables for the comprehensive assessment of global climate change. Better understanding of the difference in magnitude between these two variables over high-latitude regions is also crucial for accurate detections of freeze and thaw (FT) states. However, these differences are not usually considered and included in current remote sensing-based FT detection algorithms. In this study, the difference between near-surface air temperature at the 2-meter height and soil temperature at the 5-centimeter depth is assessed using ground-based observations that …

Escape Burrowing Of Modern Freshwater Bivalves As A Paradigm For Escape Behavior In The Devonian Bivalve Archanodon Catskillensis, Katja Knoll, Rebecca B. Chamberlain, John A. Chamberlain

Publications and Research

Many freshwater bivalves restore themselves to the sediment water interface after burial by upward escape burrowing. We studied the escape burrowing capacity of two modern unionoids, Elliptio complanata and Pyganodon cataracta and the invasive freshwater venerid Corbicula fluminea, in a controlled laboratory setting varying sediment grain size and burial depth. We found that the relatively streamlined E. complanata is a better escape burrower than the more obese P. cataracta. E. complanata is more likely to escape burial in both fine and coarse sand, and at faster rates than P. cataracta. However, successful escape from 10 cm burial, especially in fine …

How Accurate Are Satellite Estimates Of Precipitation Over The North Indian Ocean?, Satya Prakash, M. R. Ramesh Kumar, Simi Mathew, R. Venkatesan

Publications and Research

Following the launch of the Global Precipitation Measurement (GPM) Core Observatory in early 2014, motivated from the successful Tropical Rainfall Measurement Mission (TRMM) satellite, an advanced and sophisticated global multi-satellite precipitation product – Integrated Multi- satellitE Retrievals for GPM (IMERG) was released at finer spatio-temporal scales. This precipitation product has been upgraded recently after several refinements and supposed to be superior to other existing global or quasi-global multi-satellite precipitation estimates. In the present study, IMERG precipitation is comprehensively evaluated for the first time against moored buoy observations over the north Indian Ocean at hourly scale for the study period of …

Ligand Modulation Of Sidechain Dynamics In A Wild-Type Human Gpcr, Lindsay D. Clark, Igor Dikiy, Karen Chapman, Karin Ej Rodstrom, James Aramini, Michael V. Levine, George Khelashvili, Soren Gf Rasmussen, Kevin H. Gardner, Daniel M. Rosenbaum

Publications and Research

GPCRs regulate all aspects of human physiology, and biophysical studies have deepened our understanding of GPCR conformational regulation by different ligands. Yet there is no experimental evidence for how sidechain dynamics control allosteric transitions between GPCR conformations. To address this deficit, we generated samples of a wild-type GPCR (A2AR) that are deuterated apart from 1H/13C NMR probes at isoleucine d1 methyl groups, which facilitated 1H/13C methyl TROSY NMR measurements with opposing ligands. Our data indicate that low [Na+] is required to allow large agonist-induced structural changes in A2AR, and that patterns of sidechain dynamics substantially differ between agonist (NECA) and …

Stochastic Resonance In A Proton Pumping Complex I Of Mitochondria Membranes, Davneet Kaur, Ilan Filonenko, Lev Mourokh, Cornelius Fendler, Robert H. Blick

Publications and Research

We make use of the physical mechanism of proton pumping in the so-called Complex I within mitochondria membranes. Our model is based on sequential charge transfer assisted by conformational changes which facilitate the indirect electron-proton coupling. The equations of motion for the proton operators are derived and solved numerically in combination with the phenomenological Langevin equation describing the periodic conformational changes. We show that with an appropriate set of parameters, protons can be transferred against an applied voltage. In addition, we demonstrate that only the joint action of the periodic energy modulation and thermal noise leads to efficient uphill proton …

Spatial Analysis Of High-Resolution Radar Rainfall And Citizen-Reported Flash Flood Data In Ultra-Urban New York City, Brianne Smith, Stephanie Rodriguez

Publications and Research

New York City (NYC) is an ultra-urban region, with over 50% impervious cover and buried stream channels. Traditional flood studies rely on the presence of stream gages to detect flood stage and discharge, but these methods cannot be used in ultra-urban areas. Here we create a high-resolution radar rainfall dataset for NYC and utilize citizen and expert reports of flooding throughout the city to study flash flooding in NYC. Results indicate that interactions between the urban area and land–sea boundary have an important impact on the spatial variability of both heavy rainfall and flooding, sometimes in contrast to results obtained …

A Stochastic Mesoscale Model Of Transiently Networked Fluids., Lin Zhou, L. Pamela Cook

Publications and Research

Macroscale models of physically networked fluids suffer from the inability to connect directly to mesoscale processes due to nonlinearity and thus the need for closure approximations. In this paper physically networked complex fluids are modeled stochastically at the mesoscale, thus avoiding the need for closure assumptions. In the modeling and simulations the network consists of linear chains of Hookean bead-spring dumbbells. The linear chains break and reform stochastically subject to prescribed local attractive potentials. In the simulations the topology of the network is tracked allowing for quantification of the distribution of chain lengths and of individual dumbbell stretch. This formulation …

Economic Burden, Mortality, And Institutionalization In Patients Newly Diagnosed With Alzheimer’S Disease, Christopher M. Black, Howard Fillit, Lin Xie, Xiaohan Hu, M. Furaha Kariburyo, Baishali M. Ambegaonkar, Onur Baser, Huseyin Yuce, Rezaul K. Khandker

Publications and Research

Background: Current information is scarce regarding comorbid conditions, treatment, survival, institutionalization, and health care utilization for Alzheimer’s disease (AD) patients.

Objectives: Compare all-cause mortality, rate of institutionalization, and economic burden between treated and untreated newly-diagnosed AD patients.

Methods: Patients aged 65–100 years with ≥1 primary or ≥2 secondary AD diagnoses (ICD-9-CM:331.0] with continuous medical and pharmacy benefits for ≥12 months pre-index and ≥6 months post-index date (first AD diagnosis date) were identified from Medicare fee-for-service claims 01JAN2011–30JUN2014. Patients with AD treatment claims or AD/ADrelated dementia diagnosis during the pre-index period were excluded. Patients were assigned to treated and untreated cohorts …

The Effect Of Hydrogen Bonding In Enhancing The Ionic Affinities Of Immobilized Monoprotic Phosphate Ligands, Spiro D. Alexandratos, Xiaoping Liu

Publications and Research

Environmental remediation requires ion-selective polymers that operate under a wide range of solution conditions. In one example, removal of trivalent and divalent metal ions from waste streams resulting from mining operations before they enter the environment requires treatment at acidic pH. The monoethyl ester phosphate ligands developed in this report operate from acidic solutions. They have been prepared on polystyrene-bound ethylene glycol, glycerol, and pentaerythritol, and it is found that intra-ligand hydrogen bonding affects their metal ion affinities. The affinity for a set of trivalent (Fe(III), Al(III), La(III), and Lu(III)) and divalent (Pb(II), Cd(II), Cu(II), and Zn(II)) ions is greater …

On The Pursuit Of Relevance In Standards-Based Curriculum Development: The Ccny Approach, Angelo Lampousis

Publications and Research

The Society for Standards Professionals (SES) has a significant history of documenting the use of standards in research and academia. For instance, during the 62nd Annual SES Conference in 2013 in Savannah, Georgia, the author participated in such a session highlighting examples of relationships between academic institutions, government, and standards developing organizations. In this article, we attempt to capture the current advances made from similar relationships specific to our home institution, the City College of New York (CCNY) of the City University of New York (CUNY.) These advances have become possible through a grant issued under the Standards Services Curricula …

Content Analysis Of Data Science Graduate Programs In The U.S., Duo Li, Elizabeth Milonas, Qiping Zhang

Publications and Research

Data science is an emerging academic field (Paul & Aithal, 2018), which has its origins in “Big Data/Cloud Computing” and complexity science domains. Data Science is about managing large and complex data (Big Data management) and analytics technologies (Paul & Aithal, 2018). Data, technology, and people are the three pillars of data science. In addition, Data Science is composed of three key areas: analytics, infrastructure, and data curation (Tang & Sae-Lim, 2016). Stanton (2012) defined data science as “an emerging area of work concerned with the collection, preparation, analysis, visualization, management, and preservation of large collections of information (Song & …

Chelator-Free Radiolabeling Of Serrs Nanoparticles For Whole-Body Pet And Intraoperative Raman Imaging, Matthew A. Wall, Travis Shaffer, Stefan Harmsen, Darjus-Felix Tschaharganeh, Chun-Hao Huang, Scott W. Lowe, Charles Michael Drain, Moritz F. Kircher

Publications and Research

A single contrast agent that offers whole-body non-invasive imaging along with the superior sensitivity and spatial resolution of surface-enhanced resonance Raman scattering (SERRS) imaging would allow both pre-operative mapping and intraoperative imaging and thus be highly desirable. We hypothesized that labeling our recently reported ultrabright SERRS nanoparticles with a suitable radiotracer would enable pre-operative identification of regions of interest with whole body imaging that can be rapidly corroborated with a Raman imaging device or handheld Raman scanner in order to provide high precision guidance during surgical procedures. Here we present a straightforward new method that produces radiolabeled SERRS nanoparticles for …

Distinct Properties Of The Triplet Pair State From Singlet Fission, M. Tuan Trinh, Andrew Pinkard, Andrew B. Pun, Samuel N. Sanders, Elango Kumarasamy, Matthew Y. Sfeir, Luis M. Campos, Xavier Roy, X.-Y. Zhu

Publications and Research

Singlet fission, the conversion of a singlet exciton (S₁) to two triplets (2 × T₁), may increase the solar energy conversion efficiency beyond the Shockley-Queisser limit. This process is believed to involve the correlated triplet pair state ¹(TT). Despite extensive research, the nature of the ¹(TT) state and its spectroscopic signature remain actively debated. We use an end-connected pentacene dimer (BP0) as a model system and show evidence for a tightly bound ¹(TT) state. It is characterized in the near-infrared (IR) region (~1.0 eV) by a distinct excited-state absorption (ESA) spectral feature, which …

Tumor Necrosis Factor Dynamically Regulates The Mrna Stabilome In Rheumatoid Arthritis Fibroblast-Like Synoviocytes, Konstantinos Loupasakis, David Kuo, Upneet K. Sokhi, Christopher Sohn, Bethany Syracuse, Eugenia G. Giannopoulou, Sung Ho Park, Hyelim Kang, Gunnar Rätsch, Lionel B. Ivashkiv, George D. Kalliolias

Publications and Research

During rheumatoid arthritis (RA), Tumor Necrosis Factor (TNF) activates fibroblast-like synoviocytes (FLS) inducing in a temporal order a constellation of genes, which perpetuate synovial inflammation. Although the molecular mechanisms regulating TNF-induced transcription are well characterized, little is known about the impact of mRNA stability on gene expression and the impact of TNF on decay rates of mRNA transcripts in FLS. To address these issues we performed RNA sequencing and genome-wide analysis of the mRNA stabilome in RA FLS. We found that TNF induces a biphasic gene expression program: initially, the inducible transcriptome consists primarily of unstable transcripts but progressively switches …

Burden Of Atopic Dermatitis In The United States: Analysis Of Healthcare Claims Data In The Commercial, Medicare, And Medi-Cal Databases, Sulena Shrestha, Raymond Miao, Li Wang, Jingdong Chao, Huseyin Yuce, Wenhui Wei

Publications and Research

Comparative data on the burden of atopic dermatitis (AD) in adults relative to the general population are limited. We performed a large-scale evaluation of the burden of disease among US adults with AD relative to matched non-AD controls, encompassing comorbidities, healthcare resource utilization (HCRU), and costs, using healthcare claims data. The impact of AD disease severity on these outcomes was also evaluated.

Holography For Field Theory Solitons, Sophia K. Domokos, Andrew B. Royston

Publications and Research

We extend a well-known D-brane construction of the AdS/dCFT correspondence to non-abelian defects. We focus on the bulk side of the correspondence and show that there exists a regime of parameters in which the low-energy description consists of two approximately decoupled sectors. The two sectors are gravity in the ambient spacetime, and a six-dimensional supersymmetric Yang-Mills theory. The Yang-Mills theory is defined on a rigid AdS4 S2 background and admits sixteen supersymmetries. We also consider a one-parameter deformation that gives rise to a family of Yang-Mills theories on asymptotically AdS4 S2 spacetimes, which are invariant under eight supersymmetries. With future …

Elliptic Genera Of 2d (0,2) Gauge Theories From Brane Brick Models, Sebastian Franco, Dongwook Ghim, Sangmin Lee, Rak-Kyeong Seong

Publications and Research

We compute the elliptic genus of abelian 2d (0, 2) gauge theories corresponding to brane brick models. These theories are worldvolume theories on a single D1-brane probing a toric Calabi-Yau 4-fold singularity. We identify a match with the elliptic genus of the non-linear sigma model on the same Calabi-Yau background, which is computed using a new localization formula. The matching implies that the quantum effects do not drastically alter the correspondence between the geometry and the 2d (0, 2) gauge theory. In theories whose matter sector suffers from abelian gauge anomaly, we propose an ansatz for an anomaly …

Quadrality For Supersymmetric Matrix Models, Sebastian Franco, Sangmin Lee, Rak-Kyeong Seong, Cumrun Vafa

Publications and Research

We introduce a new duality for N = 1 supersymmetric gauged matrix models. This 0d duality is an order 4 symmetry, namely an equivalence between four different theories, hence we call it Quadrality. Our proposal is motivated by mirror symmetry, but is not restricted to theories with a D-brane realization and holds for general N = 1 matrix models. We present various checks of the proposal, including the matching of: global symmetries, anomalies, deformations and the chiral ring. We also consider quivers and the corresponding quadrality networks. Finally, we initiate the study of matrix models that arise on the worldvolume …

Cross-Dehydrogenative Coupling And Oxidativeamination Reactions Of Ethers And Alcohols With Aromatics And Heteroaromatics, Mahesh K. Lakshman, Prasanna K. Vuram

Publications and Research

Cross-dehydrogenative coupling (CDC) is a process in which, typically, a C–C bond is formed at the expense of two C–H bonds, either catalyzed by metals or other organic compounds, or via uncatalyzed processes. In this perspective, we present various modes of C–H bond-activation at sp3 centers adjacent to ether oxygen atoms, followed by C–C bond formation with aromatic systems as well as with heteroaromatic systems. C–N bond-formation with NH-containing heteroaromatics, leading to hemiaminal ethers, is also an event that can occur analogously to C–C bond formation, but at the expense of C–H and N–H bonds. A large variety of hemiaminal …

Study Of Pblh And Its Correlation With Particulate Matter From One-Year Observation Over Nanjing, Southeast China, Yawei Qu, Yong Han, Yonghua Wu, Peng Gao, Tijian Wang

Publications and Research

The Planetary Boundary Layer Height (PBLH) plays an important role in the formation and development of air pollution events. Particulate Matter is one of major pollutants in China. Here, we present the characteristics of PBLH through three-methods of Lidar data inversion and show the correlation between the PBLH and the PM2.5 (PM2.5 with the diameter 75 μg/m3 and the PM2.5 < 35 μg/m3 in daytime, respectively. The low PBLH often occurs with condition of the low wind speed and high relative humidity, which will lead to high PM2.5 concentration and the low visibility. On the other hand, the stability of PBL is enhanced by high PM concentration and low visibility.

Solving Liouville-Type Problems On Manifolds With Poincar´E-Sobolev Inequality By Broadening Q-Energy From Finite To Infinite, Lina Wu

Publications and Research

The aim of this article is to investigate Liouville-type problems on complete non-compact Riemannian manifolds with Poincar´e-Sobolev Inequality. Two significant technical breakthroughs are demonstrated in research findings. The first breakthrough is an extension from non-flat manifolds with non-negative Ricci curvatures to curved manifolds with Ricci curvatures varying among negative values, zero, and positive values. Poincar´e-Sobolev Inequality has been applied to overcome difficulties of an extension on manifolds. Poincar´e-Sobolev Inequality has offered a special structure on curved manifolds with a mix of Ricci curvature signs. The second breakthrough is a generalization of q-energy from finite to infinite. At this point, a …

Insights Into The Binding Mode Of Mek Type-Iii Inhibitors. A Step Towards Discovering And Designing Allosteric Kinase Inhibitors Across The Human Kinome, Zheng Zhao, Lei Xie, Philip E. Bourne

Publications and Research

Protein kinases are critical drug targets for treating a large variety of human diseases. Type- III kinase inhibitors have attracted increasing attention as highly selective therapeutics. Thus, understanding the binding mechanism of existing type-III kinase inhibitors provides useful insights into designing new type-III kinase inhibitors. In this work, we have systematically studied the binding mode of MEK-targeted type-III inhibitors using structural systems pharmacology and molecular dynamics simulation. Our studies provide detailed sequence, structure, interaction-fingerprint, pharmacophore and binding-site information on the binding characteristics of MEK type-III kinase inhibitors. We hypothesize that the helix-folding activation loop is a hallmark allosteric binding site …

Influence Of The Interaction Of Calcium Carbonate Particles With Surfactants On The Degree Of Water Pollution In Small Rivers, Petry Spataru, Francisco Fernandez, Joseph W. Sista, Tudor Spataru, Oxana Spinu, Igor Povar

Publications and Research

Introduction: The influence of the interaction of calcium carbonate (CaCO3) and surface-active substances (SAS; surfactants) with different chain lengths and cationic and anionic hydrophilic centers has been analyzed.

Results: Laboratory simulations indicate reduced negative influences on cationic SAS nitrification/self-purification processes in the presence of anionic species. This suggests the role of complex ionic formation [anionic SAS * cationic SAS] as a cause of this effect. UV-Vis spectra of lauryl sulfate (LS) and of cetyltrimethylammonium (CTMA), as well as of their mixtures in ratios of 2:1 and 1:1, treated by fine particles of CaCO3, display decreased amounts of SAS in analyzed …

Species Identification Of Necrophagous Insect Eggs Based On Amino Acid Profile Differences Revealed By Direct Analysis In Real Time-High Resolution Mass Spectrometry, Justine E. Giffen, Jennifer Y. Rosati, Cameron M. Longo, Rabi A. Musah

Publications and Research

The colonization of decomposing remains by necrophagous insects such as blow flies is of forensic importance because the progression through the various stages of insect development can be correlated to time of death. The ability to infer this information hinges on accurate determination of the fly species that are associated with the entomological evidence collected. This evidence can include eggs, larvae, pupae, and puparial casings. Determination of the egg’s identity is particularly challenging because the eggs of multiple species are morphologically very similar. We report here that the species identity of fly eggs can be determined from their chemical fingerprint …

Sobel, Dava. The Glass Universe: How The Ladies Of The Harvard Observatory Took The Measure Of The Stars. New York: Viking, 2016. 324 Pp. $30.00 Hardcover (Isbn 9780670016952)., Aldemaro Romero Jr.

Publications and Research

Women in science have been and are still facing numerous obstacles. According

to the American Association of University Professors, despite the fact that 60

percent of all doctoral students (the main pipeline for academia) in this country

are women, only 46 percent of assistant professors, 38 percent of associate

professors, and 23 percent of full professors are female. On top of that, women

faculty in colleges and universities in the United States earn on average 10 percent

less than their male counterparts.1 A number of studies have shown that women

in academia suffer from lower expectations for intelligence, so when …