Physical Sciences and Mathematics Commons^™

Soed Open Course: Seamless Modeling From Creek To Ocean On Unstructured Grids, Y. Joseph Zhang

Miscellaneous

This course explains the basic formulations used in the cross-scale SCHISM model, including the recent new developments. Hands-on tutorials will be conducted to familiarize the trainees with the basic tools useful for the modeling system. Although no formal pre-requisites are expected, trainees with prior UG model experience may find it easier to learn. Upon completion the trainees will have acquired basic knowledge on workflow in typical SCHISM simulations and be able to conduct simulations for cross-scale baroclinic processes as found in geophysical fluid dynamics (GFD)

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A Model Archive For A Coupled Hydrodynamic-Sediment Transport-Biogeochemistry Model For The Rhône River Sub-Aqueous Delta, France, Julia Moriarty, Courtney K. Harris, Katja Fennel, Kehui Xu, Christophe Rabouille, Marjorie A.M. Friedrichs

Data

This dataset includes model input, code, and output used in the publication Moriarty et al. (2017, Biogeosciences), which used a coupled hydrodynamic-sediment transport-biogeochemical model to investigate the roles of resuspension, diffusion and biogeochemical processes on oxygen dynamics on the Rhône River sub-aqueous delta, France. Model development for this project focused on coupling the sediment transport and water-column biogeochemistry modules in the Regional Ocean Modeling System (ROMS) by incorporating a seabed biogeochemistry module into the ROMS framework. As described in Moriarty et al. (2017, Biogeosciences), the coupled model can account for diffusion of nutrients across the seabed-water-column interface; storage …

The Role Of Seabed Resuspension On Oxygen And Nutrient Dynamics In Coastal Systems: A Numerical Modeling Study, Julia Miege Moriarty

Dissertations, Theses, and Masters Projects

Seabed resuspension can impact organic matter fate and water column biogeochemistry in coastal environments. Cycles of erosion and deposition can, for example, affect remineralization rates, seabed-water column fluxes of dissolved oxygen and nutrients, and light attenuation. Yet, models that incorporate both sediment transport and biogeochemical processes are rare, and nearly all neglect the effect of resuspension on oxygen and nutrient dynamics. Development of a novel tool, i.e. a coupled hydrodynamic-sediment transport-biogeochemical model, allowed for an investigation of the role of resuspension on oxygen and nitrogen dynamics within three distinct coastal environments. Called HydroBioSed, the coupled model was built within the …

Ocean Acidification Compromises A Planktic Calcifier With Implications For Global Carbon Cycling, Cv Davis, Emily B. Rivest, Et Al

VIMS Articles

Anthropogenically-forced changes in ocean chemistry at both the global and regional scale have the potential to negatively impact calcifying plankton, which play a key role in ecosystem functioning and marine carbon cycling. We cultured a globally important calcifying marine plankter (the foraminifer, Globigerina bulloides) under an ecologically relevant range of seawater pH (7.5 to 8.3 total scale). Multiple metrics of calcification and physiological performance varied with pH. At pH > 8.0, increased calcification occurred without a concomitant rise in respiration rates. However, as pH declined from 8.0 to 7.5, calcification and oxygen consumption both decreased, suggesting a reduced ability to precipitate …

Using High-Resolution Glider Data And Biogeochemical Modeling To Investigate Phytoplankton Variability In The Ross Sea, Daniel Edward Kaufman

Dissertations, Theses, and Masters Projects

As Earth’s climate changes, polar environments experience a disproportionate share of extreme shifts. Because the Ross Sea shelf has the highest annual productivity of any Antarctic continental shelf, this region is of particular interest when striving to characterize current and future changes in Antarctic systems. However, understanding of mesoscale variability of biogeochemical patterns in the Ross Sea and how this variability affects assemblage dynamics is incomplete. Furthermore, it is unknown how the Ross Sea may respond to projected warming, reduced summer sea ice concentrations, and shallower mixed layers during the next century. to investigate these dynamics and explore their consequences …

Impact Of Climate Change Variables On Nutrient Cycling By Marine Microorganisms In The Southern California Bight And Ross Sea, Antarctica, Jenna Lee Spackeen

Dissertations, Theses, and Masters Projects

Ocean environments are being impacted by climate warming, elevated carbon dioxide (CO2) levels, and shifting nutrient sources and sinks. It is essential to quantify the sensitivity of microorganisms to these effects of global change because they form the base of the marine food web and are an integral component of nutrient cycling on the planet. their role in photosynthesis, nutrient uptake, and transfer of organic matter into higher trophic levels or to the deep ocean via the biological pump render microorganisms key in ecosystem structure and function and in regulating the global climate. The goal of this dissertation research was …