Physical Sciences and Mathematics Commons^™

Implementation Considerations For The Digital Bronco Id, Bryan Gilginas

Honors Theses

This paper aims to discuss the conditions and preferences of students that Western Michigan University should take if they ever implement a Digital Bronco ID. These conditions are found via an anonymous survey given to random students. These students were prompted to answer questions based on their preference and possible uses of the Digital Bronco ID. It was found that the respondents were significantly diverse in their answers. However, things such as gender, major, and age range played a significant role in patterns in which students chose their preferences. Within the paper, these patterns are interpreted and discussed for the …

Isolation And Characterization Of A Novel Terpenoid From The Needles Of Eastern White Pine (Pinus Strobus), And Its Potential Relation To Climate Change, Samantha Hack

Honors Theses

Climate changes is one of the most serious threats facing the future of our planet, and with is we will see drastic changes to water levels global temperatures, and atmospheric conditions. Modeling future atmospheric conditions is crucial if we are to plan for and mitigate the consequences of climate change – while important, these models will not be useful to future scientists unless various parameters, such as BVOC emission to the atmosphere, are accounted for and included in computer models. Eastern white pine (Pinus strobus) are predicted to be a major component of future climax forests as their abundance increases …

Best Organic Chemistry Practices In The Midwest, Claire Van Der Bosch

Honors Theses

Organic Chemistry is a gateway course to a handful of courses in higher chemical education. Unfortunately, it is notorious for its high-fail, high-withdrawal, and high-drop rate and has a reputation for being time-consuming, with difficult concepts that are oftentimes new to students. It is often taught in a two-semester sequence, with the courses named Organic I and Organic II, and both courses have a lab component. At Western Michigan University, the fail rate for these two courses are 53.5% and 36.9%, respectively. Most higher education institutions are certified with the American Chemical Society (ACS) and given a skeleton of a …

The Effects Of Climate Change And Forest Disturbances On Terpene Production Of White Pine (Pinus Strobus) And Red Pine (Pinus Resinosa) In Northern Michigan, Troy Dehagen

Honors Theses

The secondary impacts that climate change may have on the interactions between forests and the atmosphere through forest disturbances is of increasing interest as the climate continues to change. Anthropogenic climate change, which is a direct result of coal and fossil fuel emissions, is likely to impact forest ecology through increased temperatures and extreme precipitation events, thus increasing the frequency and severity of climate-induced forest disturbances. Forest disturbances may have a secondary impact on the production and emission of biogenic volatile organic compounds (BVOC) within forests. In the presence of oxides of nitrogen (NO_x) produced from fossil fuel …

Determining The Depositional Environment Of Amherstburg Formation, Elizabeth Gaines

Honors Theses

The Amherstburg Formation is a unit that stretches from Ontario to Michigan and was deposited during the Devonian Period. The goal of this project was to determine the depositional environment of the Amherstburg Formation. Facies associations were defined based on observations from three cores in northern and southeastern Michigan and later grouped into facies associations. The four facies associations were reef rubble, lagoonal, lagoonal and reef-rubble, and lagoonal and peritidal environments. These environments were deposited as laterally adjacent environments along a ramp shelf in a humid tropical climate. Sea level was relatively high during the deposition of the Amherstburg Formation. …

Mechanisms Of Sleep And The Brain, Doungbagai Leo

Honors Theses

One of the most important homeostatic functions of the brain and body is sleep. This literary review analyzes the genes that are involved in sleep: Clock, Bmal1, Period, and Cryptochrome. It also explains the role of melatonin, GABA, orexin, and melanopsin during sleep regulation. The genes and neurotransmitters influence the suprachiasmatic nuclei and the circadian rhythm that our brain, and every cell of our bodies, have connections to. These connection help to ensure the homeostatic function of our bodies. The analysis of sleep-like states in other animals may show an evolutionary connection of sleep from non-mammals to mammals, but may …

A Comparison Of Frankenbrew And Traditionally Manufactured Brewing Equipment, Daniel King

Honors Theses

Opening a new business can be a daunting task. Between the legal paperwork, securing the best perceived location, hiring new employees, the investment can require the use of a life savings. In the brewing industry, this investment can be amplified by the cost of purchasing production scale brewing equipment. Because of this, many start-up brewing operations have turned to the use of Frankenbrew equipment within their brewing process. The term “Frankenbrew” was coined by Tom Hennessy of Colorado Boy Pub & Brewery. The term refers to any equipment incorporated into a brewery that was not originally intended for that purpose, …

Lee Honors College Mobile Application, James Ward

Honors Theses

In the spring of 2018 three Computer Science students Benjamin Campbell, James Ward, and Peter Shutt created a mobile application. This app was developed over the span of two semesters for their senior design project; a capstone to their degrees.

Their client, The Lee Honors College at Western Michigan University --referred to as LHC and WMU respectively hereafter-- has a plethora of academic and social information, and a large demand for access to it. This information includes building hours, contact information, health resources, a LHC specific course catalog, social media posts, event descriptions, and much more. The volume of information, …

The Proton Veto Project At Wmu/Msu, Justin Swaim

Honors Theses

The Proton Veto Wall (VW) is a charged particle detector designed and built at Western Michigan University for use at the National Superconducting Cyclotron Laboratory at Michigan State University. The VW assists the Large Area Neutron Array (LANA) with discriminating between charged particles detected via proton recoil in the scintillating material and charged particles detected from heavy ion collisions produced in the laboratory. Twenty five Eljen-200 plastic organic scintillators are arranged in a vertical position with photomultiplier tubes (PMTs) mounted to either end. The detector sits directly in front of LANA on a large stand that was assembled using T-slotted …

Biodiversity Of Larval And Adult Dragonflies And Damselflies (Odonata) Of Interdunal Wetlands At Saugatuck Harbor Natural Area, Devon Volz

Honors Theses

The effects of climate change on insects in the United States have yet to be fully understood. Research on the insect populations of Lake Michigan’s interdunal wetlands has been particularly limited. As these vibrant habitats are already at risk of destruction due to increased development, it is vital to have a working knowledge of the species that are living in the habitat. However, to date, there have been no studies on assemblages of interdunal wetlands in Michigan. Examining community compositions is critical to understanding the ecological problems that could occur in the future. This study is the first to look …

Type 1a Supernova Models And Galactic Chemical Evolution, Spencer Henning

Honors Theses

Multiple models of type Ia supernovae are discussed, as well as the properties of white dwarf formation, electron degeneracy pressure, nucleosynthesis, and galactic chemical evolution (GCE). A GCE computer model is used to produce nuclear abundance data corresponding to Chandra (W7) and sub-Chandra (WDD2) type Ia supernovae models for Ca, Sc, Ti, V, Cr, and Mn nuclei. Overall, a trend was found indicating that the WDD2 model had greater [x/Fe] abundance values than the W7 model at the end time of the model. Additionally, each model fit within total observed data, but observed data filtered to highlight white dwarf stars …

Extraction Studies Of Toxic Multiply Charged Oxoanions From Aqueous Media Using Nanojars, Hartman Christian

Honors Theses

In this paper, the potential of nanojars as extracting agents of chromate and arsenate from aqueous media into a non-polar organic medium is investigated. Nanojars are a class of compounds that consist of multiple [cis-CuII(μ-OH)(μ-pz)]n cyclic polymerization isomers (n = 6, 8, 9, 10, 12, 14; pz = pyrazolato anion) that form from self-assembly reactions around a multiply-charged oxoanion core with capping counterions to render an overall neutral complex. This incarcerates the anion, preventing it from escaping the complex without the use of any covalent bonding, making it a potentially highly effective and unique extracting agent. We have concluded that …

How To Plan, Budget, Write, And Implement A Student Sustainability Grant, Annalisa Wilder

Honors Theses

The Student Sustainability Grant program was created to give students valuable grant writing experience and to promote a culture of sustainability on Western Michigan University’s campus. Despite the enormous opportunity that this program provides, few students apply for the grants with their sustainable ideas. Even fewer students are able to fully complete the projects, research, and initiatives that receive funding. In order to help increase the number of grants that are fully implemented and to provide students interested in writing a grant with a useful resource, this guide was created. This ‘how-to manual’ provides an undergraduate student’s perspective on the …

The Technological Revolution And Data Science, Leslie Walcott

Honors Theses

What was once only depicted in science fiction is now a reality: computers are taking jobs from humans. As technology improves, automation is transforming the workplace. They say a “fourth industrial revolution” is inevitable within the next ten years. In the industrial revolution, the jobs lost were unskilled laborers, such as coal miners, textiles manufacturers, or cotton workers. There was no argument for whether or not a machine could do the jobs more efficiently--it was fact. The term technological unemployment means the loss of jobs caused by technological change. The headline, “Factory workers replaced by automation,” is not particularly startling …

The Regularity Lemma And Its Applications, Elizabeth Sprangel

Honors Theses

The regularity lemma (also known as Szemerédi's Regularity Lemma) is one of the most powerful tools used in extremal graph theory. In general, the lemma states that every graph has some structure. That is, every graph can be partitioned into a finite number of classes in a way such that the number of edges between any two parts is “regular." This thesis is an introduction to the regularity lemma through its proof and applications. We demonstrate its applications to extremal graph theory, Ramsey theory, and number theory.

Sum-Defined Colorings In Graphs, James Hallas

Honors Theses

There have been numerous studies using a variety of methods for the purpose of uniquely distinguishing every two adjacent vertices of a graph. Many of these methods have involved graph colorings. The most studied colorings are proper colorings. A proper coloring of a graph G is an assignment of colors to the vertices of G such that adjacent vertices are assigned distinct colors. The minimum number of colors required in a proper coloring of G is the chromatic number of G. In our work, we introduce a new coloring that induces a (nearly) proper coloring. Two vertices u and …

Karst Sub-Basin Delineation Via Dye Trace Study Near Turnhole Bend, Mammoth Cave National Park, Jake Tholen

Honors Theses

Establishing watershed boundaries is a critical stage in understanding the local water cycle. Drainage basins are typically identified by topographic divides; water flows to successively lower locations along the most direct path available. The karst terrain in Mammoth Cave National Park, however, presents additional challenges in identifying the boundaries of these basins. Underground drainages in the form of caves or conduits often do not correspond with surface topography. These passages can redirect water far from the most immediate surface release.

A dye trace study is designed to identify flow paths from the surface to springs along the Green River. Three …

The Creation Of A Video Review Guide For The Free-Response Section Of The Advanced Placement Calculus Exam, Jeffrey Brown

Honors Theses

The Creation of a Video Review Guide for the Free-Response Section of the Advanced Placement Calculus Exam follows the creation of a resource to help students prepare for the College Board’s Advanced Placement Calculus Exam. This project originated out of the authors personal experiences in preparing for this exam. The goal of the project was to create an accessible resource that reviews content, provides insights into the Advanced Placement exam, and creates successful habits in student responses. This paper, chronologically, details the development of the resource and a reflection on the final product and future uses.

Audio Software (Vst Plugin) Development With Practical Application, Zachary Hummel

Honors Theses

Audio engineers around the world routinely utilize small pieces of software, known as “plugins,” to help shape the sound of the media they are working with. These plugins are inserted into a digital audio workstation (DAW) and contain digital signal processing (DSP) algorithms that can affect audio in a number of ways limited only by the creativity of the software developer. Common implementations of plugins include equalizers, compressors and limiters, gain, phase rotation or polarity inversion algorithms, reverb and delay, and emulation of the non-linearities of analog audio equipment. The intent of this thesis project is to design and produce …

Effects Of Creatine, Leucine, And Ethanol On Glial Cell Line-Derived Neurotrophic Factor In C2c12 Skeletal Muscle Cells, Daniel Waters

Honors Theses

Glial Cell Line-Derived Neurotrophic Factor (GDNF) is a protein expressed throughout the mammalian nervous system that serves several protective functions. Originally discovered in the brain, where it supports the survival of dopaminergic neurons, GDNF has since been shown to be expressed in skeletal muscle and is vital for the maintenance of motor neurons. The relationship between muscle hypertrophy, and GDNF is not well understood. The purpose of this study was to examine the relationship between hypertrophy and GDNF by inducing hypertrophy in C2C12 skeletal muscle cells using leucine and creatine, inhibiting hypertrophy using ethanol and measuring GDNF content. As measured …

Software Improvements To Parint, A Parallel Integration Software Package, Lawrence Cuneaz

Honors Theses

The best software is easy to configure and compile, is expandable and is well tested. Development of the ParInt software package for parallel integration stopped a number of years ago. When handed the software, parts of the package no longer configured or compiled consistently. Furthermore it relied on one random number generator and had no functional testing. The team tuned the auto configuration so that the program would configure and build on current systems, created expandable functionality to add new random number generators and created two functional test packs. Now ParInt can be developed with confidence knowing that it compiles …

Gigapan Education, Marissa Morgan

Honors Theses

Secondary-school students and teachers need a safe, secure website where they can experience the life of their peers around the world through GigaPan panoramic images. Using a simple point and shoot camera, students can create deep-zoomable panoramas called GigaPans. A Ruby on Rails website was created to provide a location and interface for sharing and discussing these GigaPan panoramas between students and teachers across the globe. By sharing experiences and culture through this technology, the website aims to create a community of technologically and culturally aware young people.

Local Response To Climate Change: A Case Study Approach, Nora Gimpel

Honors Theses

The scientific consensus on the causes and consequences of climate change is clear and experts continue to strongly recommend immediate mitigation and adaptation responses (IPCC, 2014). Responses to climate change are occurring at the international, national, and subnational level, but adaptation to climate change is also highly local. Local communities across the world are organizing groups and institutions to determine their best responses for local mitigation and adaptation actions. This study analyzed the formal local community organization, the Kalamazoo Climate Change Coalition (KCCC), and its structured activities in order to evaluate how Kalamazoo has responded to climate change. Methodology for …

Influence Of Road Salt Deicers On Anaerobic Respiration And Metal Speciation In Soils, Danielle Dupuis

Honors Theses

Road salt deicers, especially NaCl and CaCl₂, are used throughout the world on paved areas during the winter. Previous studies suggest that road salt deicers can alter the biogeochemistry of sediment located near roadways and influence the mobility of heavy metals. The goal of this study is to investigate the influence of CaCl₂ on wetland soil biogeochemistry, especially trace metal speciation. Sediment cores were collected in the fall from a freshwater wetland near an urban kettle lake (Asylum Lake, Kalamazoo, MI) and incubated for 100 days in deionized water (control), 5 g/L of CaCl₂, or …

Medicare: Program, Procedures And Recommendations, Sarah Wyman

Honors Theses

My thesis is formatted in the style of a political brief, based upon the program Medicare. This report discusses the question of whether the Medicare program is performing effectively. It discusses the origins and development of Medicare, its mission and reason for the program. Included is the staffing of the Centers for Medicare and Medicaid Services, a center within the Department of Health and Human Services. It discusses the historical, current, and projected funding through FY 2015. Most notably it contains the program performance ratings of Medicare from the White House, CBO, OMB, and CMS. Medicare is a program that …

Parweb: A Front-End Interface For Cluster Computing., Jacob Potter

Honors Theses

The High Performance Computational Science Laboratory at Western Michigan University operates a cluster of systems for use by students, professors, and professional researchers. Currently users that want to access the cluster, known as “Thor”, require knowledge of the Unix/Linux command line. They also require knowledge of operating a piece of software known as TORQUE to correctly achieve results from the High Performance Computing Lab.

The Web User Interface Framework for High Performance Cluster Computing alleviates the need for intimate knowledge of a command line interface, and replaces the current interaction interface with a more user friendly and graphical oriented system. …

Functional Variants Of Metal-Binding Domains 5 And 6 Of The Human Wilson Protein, Sandra Weitzner

Honors Theses

Wilson's disease is caused by mutations in atp7b, a gene that encodes a copper-transporting P_1B-type ATPase, otherwise known as the Wilson protein. Over 300 different mutations cause Wilson's disease, and we focused on missense mutations occurring in the 650 amino acid N-terminus of the Wilson protein. This portion of the protein includes six metal-binding domains that function to azquire Cu(I) from the cytosol, prior to passing it through the ATP-driven membrane-spanning pump. Of particular interest are metal-binding domains 5 and 6 (WLN5-6) since we know that they are absolutely required for function of the enzyme. Several missense mutations …

When All Seems Lost: A Discussion On The Implications Of Using Medicine For Scientific Advances, Rebecca Monterusso

Honors Theses

When All is Lost is a creative non-fiction piece following the lives of two fictional characters living during World War" and the Holocaust. It is meant to discuss the moral quandary when human experimentation is used for the purpose of scientific advancement. The two main characters lives' are depicted in a series of modified scenes that describe what happens to them throughout the war. Leo Weinstock is a Jewish man who is chosen for the high-altitude experiments at Dachau after he is imprisoned during Kristallnacht. Erich, on the other hand, is a young, successful Luftwaffe pilot defending his country. Both …

"Integration Of Math And Music In The Secondary Classroom", Brian O'Neill

Honors Theses

The disciplines of mathematics and music seem worlds apart at first glance. Harmonious connections can inevitably be created if a deeper appreciation is lent to these stereotypically dissimilar subjects. "Integration of Mathematics and Music in the Secondary Classroom" is a quadratic function unit that utilizes music to aid in teaching mathematical concepts. The unit consists of a compilation of traditional rote mathematics and three main inquiry lessons: Problems Without Polyrhythm, Ma-Thematics, and The Undertones of Overtones. The unique approach of inquiry allows students to construct meaningful learning through a curriculum that is driven by their own mathematical questions. In addition, …

Co And Cr Adsorption On Maghemite, Quartz, And Maghemite-Quartz Mixtures, Amy Troy

Honors Theses

In aquifers and other natural systems, single mineral systems are rare. Solids are commonly heterogeneous, containing multiple minerals, and mineral interactions are expected. Mineral interactions such as formation of coatings and physical blocking of adsorption sites have the potential to significantly change the adsorption of ions onto solids. To investigate such interactions, batch experiments using Co(II) or Cr(VI) were conducted to compare adsorption edges of these sorbates on pure and mixed mineral systems. Specifically, sorption of 10^-5 or 10^-6 M Co(II) and Cr(VI) was measured as a function of pH, with a background electrolyte concentration of 0.01 M …