Physical Sciences and Mathematics Commons^™

Correlations Among Adiposity Measures In School-Aged Children, Caroline E. Boeke, Emily Oken, Ken P. Kleinman, Sheryl L. Rifas-Shiman, Elsie M. Taveras, Matthew W. Gillman

Public Health Department Faculty Publication Series

BACKGROUND:

Given that it is not feasible to use dual x-ray absorptiometry (DXA) or other reference methods to measure adiposity in all pediatric clinical and research settings, it is important to identify reasonable alternatives. Therefore, we sought to determine the extent to which other adiposity measures were correlated with DXA fat mass in school-aged children.

METHODS:

In 1110 children aged 6.5-10.9 years in the pre-birth cohort Project Viva, we calculated Spearman correlation coefficients between DXA (n=875) and other adiposity measures including body mass index (BMI), skinfold thickness, circumferences, and bioimpedance. We also computed correlations between lean body mass measures.

RESULTS: …

Childhood Body Mass Index Trajectories: Modeling, Characterizing, Pairwise Correlations And Socio-Demographic Predictors Of Trajectory Characteristics, Xiaozhong Wen, Ken Kleinman, Matthew W. Gillman, Sherly L. Rifas-Shiman, Elsie M. Taveras

Public Health Department Faculty Publication Series

BACKGROUND:

Modeling childhood body mass index (BMI) trajectories, versus estimating change in BMI between specific ages, may improve prediction of later body-size-related outcomes. Prior studies of BMI trajectories are limited by restricted age periods and insufficient use of trajectory information.

METHODS:

Among 3,289 children seen at 81,550 pediatric well-child visits from infancy to 18 years between 1980 and 2008, we fit individual BMI trajectories using mixed effect models with fractional polynomial functions. From each child's fitted trajectory, we estimated age and BMI at infancy peak and adiposity rebound, and velocity and area under curve between 1 week, infancy peak, adiposity …

Estimation Of Newborn Risk For Child Or Adolescent Obesity:Lessons From Longitudinal Birth Cohorts, Anita Morandi, David Meyre, Stephane Lobbens, Ken Kleinman, Marika Kaakinen, Sheryl L. Rifas-Shiman, Vincent Vatin, Stefan Gaget, Anneli Pouta, Anna-Liisa Hartikainen, Jaana Laitinen, Matthew W. Gillman, Marjo-Riitta Jarvelin, Philippe Froguel

Public Health Department Faculty Publication Series

OBJECTIVES:

Prevention of obesity should start as early as possible after birth. We aimed to build clinically useful equations estimating the risk of later obesity in newborns, as a first step towards focused early prevention against the global obesity epidemic.

METHODS:

We analyzed the lifetime Northern Finland Birth Cohort 1986 (NFBC1986) (N = 4,032) to draw predictive equations for childhood and adolescent obesity from traditional risk factors (parental BMI, birth weight, maternal gestational weight gain, behaviour and social indicators), and a genetic score built from 39 BMI/obesity-associated polymorphisms. We performed validation analyses in a retrospective cohort of 1,503 Italian children …

Determinants Of Health Care Use Among Rural, Low-Income Mothers And Children: A Simultaneous Systems Approach To Negative Binomial Regression Modeling, Swetha Valluri

Masters Theses 1911 - February 2014

The determinants of health care use among rural, low-income mothers and their children were assessed using a multi-state, longitudinal data set, Rural Families Speak. The results indicate that rural mothers’ decisions regarding health care utilization for themselves and for their child can be best modeled using a simultaneous systems approach to negative binomial regression. Mothers’ visits to a health care provider increased with higher self-assessed depression scores, increased number of child’s doctor visits, greater numbers of total children in the household, greater numbers of chronic conditions, need for prenatal or post-partum care, development of a new medical condition, and …

Pharmacological Chaperoning In Fabry Disease, Jerome Rogich

Masters Theses 1911 - February 2014

Fabry Disease is an X-­‐linked lysosomal storage disorder characterized by a variety of symptoms including hypohydrosis, seizures, cardiac abnormalities, skin lesions, and chronic pain. These symptoms stem from a lack of functional endogenous α-­‐ Galactosidase A (α-­GAL), which leads to an accrual of its natural substrate. The severity of the disease symptoms can be directly correlated with the amount of residual enzyme activity. It has been shown that an imino sugar, 1-deoxygalactonojirimycin (DGJ), can increase enzymatic activity and clear excess substrate. This pH-­‐dependent chaperoning phenomenon is believed to arise from the presence of aspartic acid 170 in the active site. …

Ethical Issues In Graduate Research, William J. Frey

Ethics in Science and Engineering National Clearinghouse

(Caution! This module is being published in an incomplete, preliminary version. Later edited and fuller versions will follow.) "Graduate Education in Research Ethics for Scientists and Engineers" is a project funded by the National Science Foundation (SES 0629377) to design a pilot program in research ethics for graduate students in science and engineering. This project is built around three workshops: (1) a Graduate Awareness Workshop introduces students to fundamental ethical issues in research, (2) a Moral Deliberation Workshop acquaints students with the skills of moral deliberation, (3) a Case Analysis Workshop uses realistic scenarios to allow students to practice decision-making …

Professional Ethics-Responsible Conduct Of Research Training: Making Sense Of Complex Problems, Michael D. Mumford, Shane Connelly, Ryan P. Brown, Lynn D. Devenport, Stephen T. Murphy, Alison L. Antes

Ethics in Science and Engineering National Clearinghouse

General Course Abstract

This two-day seminar format course exposes students to the complexities involved in real-world ethical decision-making. It provides students with strategies, or tools, for understanding and thinking through ethical problems to arrive at a decision. Students practice working with these strategies by applying them to realistic, complex cases.

Day 1 Abstract

During the first day of the course, guidelines and principles for ethical research practices are discussed. It is emphasized that students must apply guidelines in a context to arrive at a decision, and the course provides guidance on this decision-making process. Next, students learn about the personal …

Federal Register: National Science Foundation, Responsible Conduct Of Research, National Science Foundation

Ethics in Science and Engineering National Clearinghouse

The National Science Foundation (NSF) is announcing its implementation of Section 7009 of the America Creating Opportunities to Meaningfully Promote Excellence in Technology, Education, and Science (COMPETES) Act (42 U.S.C. 1862o–1). This section of the Act requires that ‘‘each institution that applies for financial assistance from the Foundation for science and engineering research or education describe in its grant proposal a plan to provide appropriate training and oversight in the responsible and ethical conduct of research to undergraduate students, graduate students, and postdoctoral researchers participating in the proposed research project.’’

[Abstract by author]

Role-Play Scenarios For Teaching Responsible Conduct Of Research: Assessment Of Outcomes, Stephanie N. Seiler, Michael C. Loui, Kerri L. Kristich, Kyoung Jin Kim, C. K. Gunsalus, Bradley J. Brummel

Ethics in Science and Engineering National Clearinghouse

No abstract provided.

Responsible Conduct Of Research Role-Plays: Conflict Of Interest, C. K. Gunsalus, M. C. Loui, C. K. Gunsalus, M. C. Loui, And Their Students At The University Of Illinois At Urbana-Champaign

Ethics in Science and Engineering National Clearinghouse

This faculty adviser in this role-play has a major conflict of interest, which puts the student in an awkward situation. If the conflict oversight committee hasn’t contacted the student already (an unfortunately common situation), they should have. In an ideal situation, every student affected by a potential conflict of interest should have some written guidance about what to expect and how to get advice if concerns arise.

One useful step is to find out if there are any written policies or guidelines about what students can expect in situations like this: for example, is there a meeting annually or every …

Federal Register: National Science Foundation, Responsible Conduct Of Research, National Science Foundation

Ethics in Science and Engineering National Clearinghouse

The National Science Foundation (NSF) is soliciting public comment on the agency’s proposed implementation of Section 7009 of the America Creating Opportunities to Meaningfully Promote Excellence in Technology, Education, and Science (COMPETES) Act (42 U.S.C. 1862o–1). This section of the Act requires that ‘‘each institution that applies for financial assistance from the Foundation for science and engineering research or education describe in its grant proposal a plan to provide appropriate training and oversight in the responsible and ethical conduct of research to undergraduate students, graduate students, and postdoctoral researchers participating in the proposed research project.’’

[Abstract by author]

Ethical Issues In Peer Review Of Research, Michael C. Loui

Ethics in Science and Engineering National Clearinghouse

No abstract provided.

Responsible Conduct Of Research Role-Plays: Whistleblowing Data Management, C. K. Gunsalus, M. C. Loui, C. K. Gunsalus, M. C. Loui, And Their Students At The University Of Illinois At Urbana-Champaign

Ethics in Science and Engineering National Clearinghouse

This role-play involves data mismanagement in a research lab. The graduate students suspects that the post-doc fabricated experimental results, which is a form of research misconduct. The realization or suspicion that someone has engaged in research misconduct is one of the most difficult situations researchers face. However, someone who has witnessed misconduct has an obligation to act and report this behavior. Reporting the misconduct, which also known as whistle-blowing, should be done in a cautious and responsible way. Ideally, whistle-blowers should never be afraid to come forward with questions of misconduct, as they should be supported by their institutions and …

Responsible Conduct Of Research Role-Plays: Hazardous Substances, C. K. Gunsalus, M. C. Loui, C. K. Gunsalus, M. C. Loui, And Their Students At The University Of Illinois At Urbana-Champaign

Ethics in Science and Engineering National Clearinghouse

This role-play focuses on the dilemmas in balancing regulatory requirements, personal relationships and a natural reluctance to “cause trouble.” These dilemmas arise in many settings, and can be particularly acute in laboratories that handle hazardous substances because of the serious safety implications of violations. In addition, violations can carry fines and penalties for laboratories and universities where they occur. The worries of the graduate student in the role-play about potential laboratory shut-downs and corresponding research delays are all too real. Specifics of regulations vary according to the materials being handled. The underlying principles regarding human and environmental safety stay the …

Responsible Conduct Of Research Role-Plays: Human Subjects, C. K. Gunsalus, M. C. Loui, C. K. Gunsalus, M. C. Loui, And Their Students At The University Of Illinois At Urbana-Champaign

Ethics in Science and Engineering National Clearinghouse

This role-play addresses issues involved with human subject research and working with an Institutional Review Board (IRB).

The Belmont Report (1979) identifies three basic ethical principles that underlie all human subject research. These principles are Respect for persons, Beneficence, and Justice. Respect for persons requires us to treat individuals as autonomous human beings and not to use people as a means to an end. We must allow people to choose for themselves and provide extra protection to those with limited ability to choose, such as children. Rules derived from the principle of respect for persons include the requirements to obtain …

Responsible Conduct Of Research Role-Plays: Peer Review, C. K. Gunsalus, M. C. Loui, C. K. Gunsalus, M. C. Loui, And Their Students At The University Of Illinois At Urbana-Champaign

Ethics in Science and Engineering National Clearinghouse

This scenario is based on “What is Responsible Peer Review?” http://ccnmtl.columbia.edu/projects/rcr/rcr_authorship/case/index.html#2, which is based on the “Confidentiality vs. Mentor Responsibilities: A Conflict of Obligations” scenario, http://onlineethics.org/reseth/appe/vol3/conflictobligations.html, which is based on a real incident.

This scenario highlights several issues in the peer review of manuscripts submitted for publication:

• Conflict of interest in the role of the reviewer

• Confidentiality of information in the manuscript

• Role of the adviser in the professional development of a graduate student

Although this scenario is not based on a single actual incident, each of the scenario’s elements occurs frequently in research in science and …

Responsible Conduct Of Research Role-Plays: Animals, C. K. Gunsalus, M. C. Loui, C. K. Gunsalus, M. C. Loui, And Their Students At The University Of Illinois At Urbana-Champaign

Ethics in Science and Engineering National Clearinghouse

This scenario highlights ethical issues in reporting violations in a situation where extensive federal regulations and guidance apply. Specifically, the lab was using animals in ways that violated its own protocol and included making unauthorized purchases of animals.

The driving issue in this scenario is how to handle the discovery that another lab might have violated these regulations. Labs often have a great deal of autonomy and faculty members may feel uncomfortable questioning the conduct of their colleagues. Professor Prenlen appears to be violating animal care regulations, and involving students in those violations. This creates a difficult situation for the …

Responsible Conduct Of Research Role-Plays: Whistle-Blowing And Professional Relationships, C. K. Gunsalus, M. C. Loui, C. K. Gunsalus, M. C. Loui, And Their Students At The University Of Illinois At Urbana-Champaign

Ethics in Science and Engineering National Clearinghouse

This role-play focuses on a whistle-blowing scenario involving data management issues in a research lab, complicated by uncomfortable personal relationships. Whistle-blowing involves raising concerns or allegations of wrongdoing or misconduct. There is an obligation for whistle-blowers to do so in good faith, which means based on reasonable belief or facts. Suspecting that someone has engaged in research misconduct is one of the most difficult situations researchers face. This is especially true when relationships are strained for other reasons.

If you have the suspicion of research misconduct, the possible consequences for all involved can be serious. To handle the situation responsibly …

Responsible Conduct Of Research Role-Plays: Authorship, C. K. Gunsalus, M. C. Loui, C. K. Gunsalus, M. C. Loui, And Their Students At The University Of Illinois At Urbana-Champaign

Ethics in Science and Engineering National Clearinghouse

This role-play deals with issues concerning authorship credit. Concerns about authorship raise the ethical principle of fairness because people should receive credit for their contributions. Authors of a scientific work must have made substantial or significant contributions to the project because they are taking public responsibility for its content. Authors must also be willing and able to respond to questions about the work. The hard part of authorship is deciding what kind of intellectual contribution counts as substantial or significant and therefore warrants authorship. Despite the availability of guidelines, there are differences of opinions within and between scientific disciplines. Broad …

Responsible Conduct Of Research Role-Plays: Mentoring, C. K. Gunsalus, M. C. Loui, C. K. Gunsalus, M. C. Loui, And Their Students At The University Of Illinois At Urbana-Champaign

Ethics in Science and Engineering National Clearinghouse

This scenario highlights the mismatch of expectations that can arise in a mentoring relationship between a graduate student and a research adviser. The adviser wants a solely professional relationship, but the student seeks a more personal relationship. Their inconsistent desires lead to inconsistent expectations about how long they should meet and what they should discuss, and subsequently to misunderstandings about the preliminary results.

Some of the problems in this scenario could have been avoided had the adviser and student negotiated mutual expectations and responsibilities when they first began working together. In general, a professor and student should agree on expectations, …

Approaches To Estimation Of Haplotype Frequencies And Haplotype-Trait Associations, Xiaohong Li

Doctoral Dissertations 1896 - February 2014

Characterizing the genetic contributors to complex disease traits will inevitably require consideration of haplotypic phase, the specific alignment of alleles on a single homologous chromosome. In population based studies, however, phase is generally unobservable as standard genotyping techniques provide investigators only with data on unphased genotypes. Several statistical methods have been described for estimating haplotype frequencies and their association with a trait in the context of phase ambiguity. These methods are limited, however, to diploid populations in which individuals have exactly two homologous chromosomes each and are thus not suitable for more general infectious disease settings. Specifically, in the context …

Role-Play Scenarios For Teaching Responsible Conduct Of Research, Bradley J. Brummel, C. K. Gunsalus, Kerri L. Kristich, Michael C. Loui, Stephanie N. Seiler

Ethics in Science and Engineering National Clearinghouse

No abstract provided.

America Competes Act Excerpt And Nsf Implementation Plan From The Federal Register, Ethics In Science And Engineering National Clearinghouse

Ethics in Science and Engineering National Clearinghouse

This document excerpts relevant RCR and mentoring sections from the America COMPETES Act and the National Science Foundation’s Implementation Plan posted in the Federal Register on August 20, 2009 (Vol. 74, No. 160).

How To Mentor Graduate Students: A Guide For Faculty, Rackham Graduate School - University Of Michigan

Ethics in Science and Engineering National Clearinghouse

No abstract provided.

Data Management And Whistle-Blowing, Michael C. Loui

Ethics in Science and Engineering National Clearinghouse

No abstract provided.

Text As Property / Property As Text, Christopher Kelty, Alfred Housman, Scott Mcgill

Ethics in Science and Engineering National Clearinghouse

Ownership, authorship, plagiarism, intellectual property, parody, critique, re-use, credit, reputation, allusion, imitation, patronage, payment, piracy, creativity, originality, borrowing, lending, stealing, quoting, citing, lifting, re-writing, translating, acting, performing, impersonating, collaborating, re-creating, editing, sampling, sharing.

If you can distinguish between all these activities, legally, morally, culturally and historically, then you don't need our class. If on the other hand, you want to know why ancient Romans sampled Virgil so often, or why some plagiarism is art and some is crime, or what could happen to manuscripts in antiquity when they circulated, or why the RIAA is suing thousands of college students, or …

How To Get The Mentoring You Want: A Guide For Graduate Students At A Diverse University, Rackham Graduate School - University Of Michigan

Ethics in Science and Engineering National Clearinghouse

No abstract provided.

America Competes Act, United States

Ethics in Science and Engineering National Clearinghouse

The full text of the America COMPETES Act. See Sec. 7008. Postdoctoral Research Fellows, and Sec. 7009. Responsible Conduct of Research.

Ethics Across The Curriculum Modules For Eac Toolkit Workshops, William J. Frey, Jose A. Cruz-Cruz

Ethics in Science and Engineering National Clearinghouse

This collection of modules has been designed to show how the Ethics Across the Curriculum Toolkit project provides for the preparation and pairing of student and instructor modules. These modules have been brought together and paired to aid in Toolkit demonstrations designed for faculty developement workshops in ethics across the curriculum.

Abstract by author.

Ethics Bowl Competition As Capstone Activity For Practical And Professional Ethics Classes, William J. Frey, Jose A. Cruz-Cruz

Ethics in Science and Engineering National Clearinghouse

In Connexions, a course is both a course (what is offered in a school curriculum) and a collection of modules. This course as a collection of modules has been designed to pull together the modules published in Connexions by this author for the purpose of showing different aspects of the Ethics Bowl competition and how it can be used in a university course on practical and professional ethics. The Ethics Bowl concept comes from Robert Ladenson of the Illinois Institute of Technology. Through the Association of Practical and Professional Ethics, the Ethics Bowl competition has been carried out nationally for …