Physical Sciences and Mathematics Commons^™

Investigating Smoke Aerosol Emission Coefficients Using Modis Active Fire And Aerosol Products – A Case Study In The Conus And Indonesia, Xiaoman Lu, Xiaoyang Zhang, Fangjun Li, Mark Cochrane

Global Land Surface Season Data Sets

This data set is in relation to the paper of the same title, which has been submitted to the Journal of Geophysical Research: Biogeosciences.

Instructions for viewing the data in “Readme.txt”

Sdstate Sustainability Newsletter: Vol. 3 Issue 1, Jennifer Mclaughlin

SD State Sustainability Newsletter

Content:
SDSU Launches Sustainability Minor
Upcoming Events
While You Were Away
Recycling Update
Sustainability Tidbits

Large Scale Climate Oscillation Impacts On Temperature, Precipitation And Land Surface Phenology In Central Asia, Kirsten M. De Beurs, Geoffrey Henebry, Braden C. Owsley, Irina N. Sokolik

GSCE Faculty Publications

Central Asia has been rapidly changing in multiple ways over the past few decades. Increases in temperature and likely decreases in precipitation in Central Asia as the result of global climate change are making one of the most arid regions in the world even more susceptible to large-scale droughts. Global climate oscillations, such as the El Ni ̃no–Southern Oscillation, have previously been linked to observed weather patterns in Central Asia. However, until now it has been unclear how the different climate oscillations act simultaneously to affect the weather and subsequently the vegetated land surface in Central Asia.We fit well-established land …

Changing Snow Seasonality In The Highlands Of Kyrgyzstan, Monika Tomaszewska, Geoffrey Henebry

GSCE Faculty Publications

Few studies have examined changing snow seasonality in Central Asia. Here, we analyzed changes in the seasonality of snow cover across Kyrgyzstan (KGZ) over 14 years from 2002/03–2015/16 using the most recent version (v006) of MODIS Terra and Aqua 8 day snow cover composites (MOD10A2/MYD10A2). We focused on three metrics of snow seasonality—first date of snow, last date of snow, and duration of snow season—and used nonparametric trends tests to assess the significance and direction of trends. We evaluated trends at three administration scales and across elevation. We used two techniques to assure that our identification of significant trends was …

Changing Snow Seasonality In The Highlands Of Kyrgyzstan, Monika Tomaszewska, Geoffrey Henebry

NASA Land-Cover Land-Use Change Data Sets

Few studies have examined changing snow seasonality in Central Asia. Here, we analyzed changes in the seasonality of snow cover across Kyrgyzstan (KGZ) over 14 years from 2002/03–2015/16 using the most recent version (v006) of MODIS Terra and Aqua 8 day snow cover composites (MOD10A2/MYD10A2).We focused on three metrics of snow seasonality—first date of snow, last date of snow, and duration of snow season—and used nonparametric trends tests to assess the significance and direction of trends. We evaluated trends at three administration scales and across elevation. We used two techniques to assure that our identification of significant trends was not …

Sdstate Sustainability Newsletter: Vol. 2 Issue 4, Jennifer Mclaughlin

SD State Sustainability Newsletter

Content:
More than Just the Environment
Earth Day Quiz
The Big Event
Climate Change & You
Sustainability Tidbeits

The Journal Of Undergraduate Research: 2017

The Journal of Undergraduate Research

This is the complete issue of the South Dakota State University Journal of Undergraduate Research, Volume 15.

Do Precision Chemical Amendment Applications Impact Sodium Movement In Dryland Semiarid Saline Sodic Soils?, Tulsi P. Kharel, David E. Clay, Cheryl Reese, Thomas Desutter, Doug D. Malo, Sharon Clay

Agronomy, Horticulture and Plant Science Faculty Publications

Expanding sodicity and salinity problems have placed many northern Great Plains (NGP) soils at the sustainability tipping point. This study assessed the impact of chemical restoration on water and salt transport in undisturbed soil columns collected from three hillslope model landscape positions. The backslope (Redfield), footslope (White Lake), and toeslope (Pierpont) soils had moderate (3.27 ± 0.59), high (7.3 ± 3.34), and very high (13.29 ± 3.2) sodium adsorption ratio (SAR_e) values, respectively. The soils were treated with KBr and one of four soil amendments (none, H₂SO₄, CaSO₄, and CaCl₂). …

Investigation Of The Fire Radiative Energy Biomass Combustion Coefficient - A Comparison Of Polar And Geostationary Satellite Retrievals Over The Conterminous United States, Fangjun Li, Xiaoyang Zhang

Global Land Surface Season Data Sets

The data is for the article "Investigation of the Fire Radiative Energy Biomass Combustion Coefficient - A Comparison of Polar and Geostationary Satellite Retrievals Over the Conterminous United States", which has been submitted to the Journal of Geophysical Research: Biogeosciences.

The data file contains a total of 20 files in 10 folders that are associated to the figures and tables in the article. General instruction for viewing output data for the paper can be found in the "Readme" text file.

Quantifying Undisturbed (Native) Lands In Northwestern South Dakota: 2013, Pete Bauman, Benjamin Carlson, Tanner Butler, Brad Richardson

Quantifying Undisturbed (Native) Lands in Northwestern South Dakota: 2013

We employed simple GIS methods primarily utilizing the South Dakota Farm Service Agency’s Common Land Unit (CLU) data layers from 2013 and the 2012 United States Department of Agriculture (USDA) National Agriculture Imagery Program (NAIP) county mosaic aerial imagery to evaluate 7,347,812 acres of land in northwestern South Dakota. The analysis area includes: Harding, Perkins, and Butte counties along with portions of Lawrence and Meade counties outside of the Black Hills Core Highlands and Plateau Ecoregions.

We utilized the FSA CLU data layer queried to show current and former cropland to identify and remove any areas with cropping history regardless …

Application Of Drainage Water Management And Saturated Buffers For Conservation Drainage In South Dakota, Abhinav Sharma

Electronic Theses and Dissertations

Edge of field practices such as drainage water management (DWM) and saturated buffers can reduce nutrient transport from croplands to surface waterbodies. DWM uses stackable weir boards in a control structure to manipulate the water table depth throughout the cropping season and reduce the amount of nutrient rich water draining out from the field. Saturated buffers, on the other hand, use a control structure to divert water draining out from the cropland to a vegetative strip via a subsurface tile installed parallel to a waterway. For the saturated buffer systems, a combination of natural denitrification, nitrogen mineralization, and plant uptake …

Black-Tailed Prairie Dog (Cynomys Ludovicianus) State-And-Transition Model For Loamy Ecological Sites In Mlra 62 In Custer State Park, South Dakota, Mark R. Hendrix

Electronic Theses and Dissertations

Black-tailed prairie dogs (Cynomys ludovicianus) are native burrowing rodents that occupy large areas in the shortgrass and mixed-grass prairies of the Northern Great Plains. They are an important component of these prairie systems due to their impacts on plant communities. Currently State-and-Transition models (STMs) for grassland Ecological Site Descriptions (ESDs) address grazing by livestock as a major factor affecting states and phases within states. Impacts from other grazers, such as prairie dogs, are either not addressed directly, or are included only in a transition to a generalized early seral state. There are, however, dramatic differences in plant communities …

Walleye Fishery Ecology In Lake Oahe Of The Dakotas, Eli Felts

Electronic Theses and Dissertations

Walleye Sander vitreus is among the most popular sport fishes in North America and is the most sought-after fish in both South Dakota and North Dakota. Lake Oahe, a large main stem Missouri River reservoir, spans state boundaries and provides one of the most popular and productive Walleye fisheries in both Dakotas. The Walleye population of Lake Oahe has experienced wide fluctuations in abundance and size structure over the last 25 years which has caused high variability in angler use and satisfaction. Much of this variation is thought to be driven by Rainbow Smelt Osmserus mordax, which are the dominant …

Variable Selection Techniques For Clustering On The Unit Hypersphere, Damon Bayer

Electronic Theses and Dissertations

Mixtures of von Mises-Fisher distributions have been shown to be an effective model for clustering data on a unit hypersphere, but variable selection for these models remains an important and challenging problem. In this paper, we derive two variants of the expectation-maximization framework, which are each used to identify a specific type of irrelevant variables for these models. The first type are noise variables, which are not useful for separating any pairs of clusters. The second type are redundant variables, which may be useful for separating pairs of clusters, but do not enable any additional separation beyond the separability provided …

Quantifying Potential Long-Term Changes In Erosion, Discharge, And Total Suspended Solids Resulting From Agricultural Land Use Change In South Dakota, Hector Manuel Menendez Iii

Electronic Theses and Dissertations

South Dakota is a mosaic of grasslands, wetlands, and cropland. A continuing shift from grassland to cropland has occurred over the past decade and is expected for the next 50 years. Rate of future conversion may vary greatly in response to regulatory, economic, and social factors. Concern has risen over environmental consequences associated with land conversion, which include but are not limited to changes in rill and sheet erosion rates from cultivated soils, stream and river discharge, and water quality. Quantifying future changes for these three externalities is important to understand the possible long-term consequences of complex grassland conversion decisions …

Mapping And Risk Assessment Of Juniper Encroachment Into A Prairie Landscape, Kyle D. Kaskie

Electronic Theses and Dissertations

Juniper encroachment is a considerable threat to the prairie ecosystems of the Great Plains because it has the potential to alter native grasslands by changing soil characteristics, limiting herbaceous biomass, and hindering native community regeneration. Accurate maps of juniper cover and predictions of areas at risk for future expansion are needed to support proactive management measures. Therefore, our objectives are to: (1) Develop a practical workflow for large-scale juniper mapping using Landsat 8 Operational Land Imager (OLI) imagery and partial unmixing techniques, (2) Compare the classification accuracies from the resulting map based on different juniper density thresholds and different types …

Biomass Burning In The Conterminous United States: A Comparison And Fusion Of Active Fire Observations From Polar-Orbiting And Geostationary Satellites For Emissions Estimation, Fangjun Li

Electronic Theses and Dissertations

Biomass burning is an important source of atmospheric greenhouse gases and aerosol emissions that significantly influence climate and air quality. Estimation of biomassburning emissions (BBE) has been limited to the conventional method in which parameters (i.e., burned area and fuel load) can be challenging to quantify accurately. Recent studies have demonstrated that the rate of biomass combustion is a linear function of fire radiative power (FRP), the instantaneous radiative energy released from actively burning fires, which provides a novel pathway to estimate BBE. To obtain accurate and timely BBE estimates for near real-time applications (i.e., air quality forecast), the satellite …

Evaluating E. Coli Particle Attachment And The Impact On Transport During High Flows, Louis Amegbletor

Electronic Theses and Dissertations

Fecal indicator bacteria, including E. coli, are the leading cause of water quality impairments within assessed waters in the United States. The source of E. coli includes WWTP, leaking sewers, animal manure, wildlife, livestock, and stream bed sediment. Storm events contribute to bacteria loading within waters through wash-in of land sources of bacteria and resuspension of bacteria within sediments. Bacteria introduced into the water column are either attached to particles or are unattached (or free-living). The goal of this study was to examine the attachment of E. coli to different particle sizes, including their impact on contributing to water …

Identifying And Characterizing Salt-Tolerant Alfalfa (Medicago Sativa Subsp Falcata Germplasm, Katelin E. Frerichs, Lan Xu

Natural Resource Management Faculty Publications

Soil salinity limits plant growth and crop production. More than 20% of cultivated land worldwide is affected by salinity. The situation is becoming more severe due to shifts in precipitation and evaporation patterns and improper irrigation. There is an urgent need to develop salt-tolerant, economically valuable plants to minimize the loss of and to sustain agricultural production. Alfalfa is one of the most extensively cultivated forage crops. Some yellow-flowered alfalfa (Medicago sativa subsp. falcata) have exhibited morphological and physiological drought tolerance. Since soil salinity is associated with physiological drought, it is reasonable to expect that these drought tolerant falcata populations …

Role Of Non-Muscle Myosin Ii In Hs578t/Hs578ts(I)8 Triple Negative Breast Cancer Progression, Shimara Gunawardana

Electronic Theses and Dissertations

Loss of cell-cell adhesion and migration are prerequisites for the formation of metastases. These events are mediated by changes in the actomyosin cytoskeleton. Nonmuscle myosin II (NMII) belongs to the myosin superfamily of motor proteins which binds to actin and controls actin cross-linking and contraction, however its role and regulation in cell-adhesion and migration remains poorly understood. In this study, we report that associations of α5β1integrin receptors and Ncadherins with NMII isoforms NM-IIA and NMII-B correlate with increased cell-cell adhesion and reduced migratory behavior of the parental Hs578T cells of the Hs578T/Hs578Ts(i)8 triple-negative breast cancer progression model. Using blebbistatin, a …

Mob Vs. Rotational Grazing: Impact On Forage Use And Artemisia Absinthium, Heidi Reed, Alexander Smart, David E. Clay, Michelle Ohrtman, Sharon A. Clay

Agronomy, Horticulture and Plant Science Faculty Publications

Short duration (≤24 h), high stocking density grazing systems (e.g., mob grazing) mimics historic prairie grazing patterns of American bison (Bison bison), and should minimize selective grazing. We compared mob [125 cow-calf pairs on either 0.65 ha for 12 h; or 1.3 ha for 24 h] vs. rotational [25 cow-calf pairs on 8.1 ha for 20 days starting in mid-May with or without 2,4-D application prior to grazing; and 15 days starting mid-April (no herbicide)] grazing systems based on forage utilization and impact to Artemisia absinthium (absinth wormwood) in a tall grass pasture of Eastern South Dakota. Grass …

Isolation Of Potential Photosynthetic N2-Fixing Microbes From Topsoil Of Native Grasslands In South Dakota, Nanfang Wang, Shengni Tian, Liping Gu, Lan Xu, Yeyan Qiu, Trevor Van Den Top, Jose L. Gonzalez-Hernandez, Michael B. Hildreth, Shaoshan Li, Runbao Zhou

Natural Resource Management Faculty Publications

Nitrogen fertilizer is one of the most limiting factors and costly inputs in agriculture production. Current fossil fuel-dependent ammonia production is both energy intensive and environmentally damaging. An economically practical and environmentally friendly solution for the production of ammonia is urgently needed. Solar-powered N2-fixing cyanobacteria provide a unique opportunity and promise for applications in agriculture compared to all other N2-fixing bacteria that cannot use solar energy. Isolation of nitrogen-fixing microbes from the topsoil of native grasslands may have the potential to use them in crop fields as living ammonia factories. This may be a mechanism to free farmers from heavy …

Impacts Of Strategic Grazing And Fire On Soil Seed Bank Heterogeneity In Mixed-Grass Prairie, Kassidy Weathers, Lan Xu, Patricia Johnson

Natural Resource Management Faculty Publications

Native plant communities in the Northern Great Plains evolved under periodic fire and substantial grazing pressure from native herbivores, two main drivers maintaining the heterogeneity of grassland ecosystems. However, contemporary management practices focus on maximizing livestock production through fire suppression and uniform grazing strategies, resulting in decreased vegetation heterogeneity, species richness, wildlife habitat, and biodiversity. Objectives of this study were to evaluate and compare the effectiveness of patch-burn grazing (PBG) and winter-patch grazing (WPG) managements on soil seed bank heterogeneity in terms of species 1) richness, 2) composition, 3) abundance, and 4) diversity. Two soil cores (10-cm dia × 10-cm …

Greenhouse Gas Emissions From Soil Applied Nitrogen Fertilizers, Samuel Thies

Electronic Theses and Dissertations

Greenhouse gases (GHG) absorb and emit radiant energy in the thermal range. Their concentrations in the atmosphere are increasing and becoming an ever increasing issue as the Earth’s average temperature continues to rise. Agricultural practices, such as applying nitrogen fertilizer to increase crop yield can be a major source of GHG emissions and methods are needed to decrease these emissions. The measurements of GHG emissions have been difficult, expensive, and erratic. However, advancing technologies have increased the accuracy and confidence in measuring GHG emissions. The objectives of this study were to determine the 1) effects of different nitrogen fertilizer sources, …

Impacts Of Diverse Crop Rotations And Integrated Crop-Livestock System On Soil Quality In South Dakota, Atilla Polat

Electronic Theses and Dissertations

Crop diversification can be beneficial in improving soil quality parameters. Diverse crop rotations and integrated crop-livestock systems (ICLS), are two examples of crop diversification used in this study to assess soil quality. The objectives of this study were to: (i) assess the impacts of diverse rotations on soil quality parameters, and (ii) assess the impacts of low and high stocking density on soil quality parameters. Both of the studies were conducted separately and are presented as two different chapters. To accomplish objective (i), a long-term experiment was selected which was established near Brookings, South Dakota, USA at USDA-ARS lab in …

Development Of Biclustering Techniques For Gene Expression Data Modeling And Mining, Juan Xie

Electronic Theses and Dissertations

The next-generation sequencing technologies can generate large-scale biological data with higher resolution, better accuracy, and lower technical variation than the arraybased counterparts. RNA sequencing (RNA-Seq) can generate genome-scale gene expression data in biological samples at a given moment, facilitating a better understanding of cell functions at genetic and cellular levels. The abundance of gene expression datasets provides an opportunity to identify genes with similar expression patterns across multiple conditions, i.e., co-expression gene modules (CEMs). Genomescale identification of CEMs can be modeled and solved by biclustering, a twodimensional data mining technique that allows clustering of rows and columns in a gene …

Aspects Of White-Tailed Deer Ecology And Management: Effects Of Imidacloprid And An Evaluation Of Management At Great Swamp National Wildlife Refuge, Elise Hughes Berheim

Electronic Theses and Dissertations

White-tail deer (Odocoileus virginianus) are an economically and recreationally important species throughout their range, and understanding their ecology to implement beneficial management techniques is invaluable. This thesis focused on two studies 1) the effect of Imidacloprid on adult female and fawn physiology and 2) an evaluation of techniques to monitor white-tailed deer at Great Swamp National Wildlife Refuge (GSNWR). Imidacloprid, a widely-used pesticide, has been linked to lethal and sub-lethal effects in insects and small vertebrates, however, no research has been conducted on white-tailed deer. Twenty captive pregnant adult female and subsequent fawns housed at the South Dakota …

Satellite Remote Sensing Of Woody And Herbaceous Leaf Area For Improved Understanding Of Forage Resources And Fire In Africa, Milkah Njoki Kahiu

Electronic Theses and Dissertations

In sub-Saharan Africa (SSA) tree-grass systems commonly referred to as savannas dominating drylands, play a critical role in social, cultural, economic and environmental systems. These coupled natural-human systems support millions of people through pastoralism, are important global biodiversity hotspots and play a critical role in global biogeochemical cycles. Despite the importance of SSA savannas, they have been marginalized for years as most governments neglect dryland resources in favor of agricultural research and development assistance. Hence, lack of spatially and temporally accurate information on the status and trends in savanna resources has led to poor planning and management. This scenario calls …

A Comprehensive Analysis Of Aromatic-Proton Mediated Hydrogen Bonds, Mona S. Alshamrani

Electronic Theses and Dissertations

Hydrogen bonds play critical role in folding, structure and recognition of biological macromolecules (e.g., proteins, RNA, DNA). In addition to classical hydrogen bonds (e.g., ─OH---O=, ─OH---O─, ─NH---O─ etc.), structural analysis of protein and nucleic acids, almost a decade ago, showed that hydrogen bonds (e.g., CH---O) with hydrogen atoms on aliphatic carbon atoms (hereafter, aliphatic-protons) also play very important role in the structure and function of biomolecules. Even though, protons of aromatic ring systems (hereafter, aromatic-protons) are more polar than the aliphatic-protons, systematic analysis of hydrogen bonds of aromatic-protons have not been carried out. Therefore, I carried out a systematic analysis …

Quantifying The Short-Term Impacts Of Cover Crops And Grazing On Soil Health Under An Integrated Crop-Livestock System In South Dakota, Vishal Seth

Electronic Theses and Dissertations

Cover crops and grazing under Integrated Crop-Livestock System (ICLS) can impact the rhizosphere nutrient cycling and may have potential to increase the long-term sustainability and economic profitability of agricultural production system. In South Dakota, crop production practices and livestock husbandry are both common which provide the opportunity for ICLS to be successful in this region. However, little is known about the impacts of the cover crops and grazing under ICLS on soil properties in this region. The present study was conducted at South Dakota State University Research Farm (44°20'34.8"N, 96°48'14.8"W), Brookings, SD, to quantify the impacts of cover crops and …