Physical Sciences and Mathematics Commons^™

Improving Automatic Melanoma Diagnosis Using Deep Learning-Based Segmentation Of Irregular Networks, Anand K. Nambisan, Akanksha Maurya, Norsang Lama, Thanh Phan, Gehana Patel, Keith Miller, Binita Lama, Jason Hagerty, Ronald Stanley, William V. Stoecker

Chemistry Faculty Research & Creative Works

Deep Learning Has Achieved Significant Success in Malignant Melanoma Diagnosis. These Diagnostic Models Are Undergoing a Transition into Clinical Use. However, with Melanoma Diagnostic Accuracy in the Range of Ninety Percent, a Significant Minority of Melanomas Are Missed by Deep Learning. Many of the Melanomas Missed Have Irregular Pigment Networks Visible using Dermoscopy. This Research Presents an Annotated Irregular Network Database and Develops a Classification Pipeline that Fuses Deep Learning Image-Level Results with Conventional Hand-Crafted Features from Irregular Pigment Networks. We Identified and Annotated 487 Unique Dermoscopic Melanoma Lesions from Images in the ISIC 2019 Dermoscopic Dataset to Create a …

Analyzing Ground Motion Records With Cvi Fuzzy Art, Dustin Tanksley, Xinzhe Yuan, Genda Chen, Donald C. Wunsch

Civil, Architectural and Environmental Engineering Faculty Research & Creative Works

This paper explores using Cluster Validity Indices Fuzzy Adaptative Resonance Theory (CVI Fuzzy ART) to cluster ground motion records (GMRs). Clustering the features extracted from a supervised network trained for predicting the structure damage results in less overfitting from the trained network. Using Cluster Validity Indices (CVIs) to evaluate the clustering gives feedback to how well the data is being classified, allowing further separation of the data. By using CVI Fuzzy ART in combination with features extracted from a trained Convolutional Neural Network (CNN), we were able to form additional clusters in the data. Within the primary clusters, accuracy was …

Prediction Of Soil Water Content And Electrical Conductivity Using Random Forest Methods With Uav Multispectral And Ground-Coupled Geophysical Data, Yunyi Guan, Katherine R. Grote, Joel Schott, Kelsi Leverett

Geosciences and Geological and Petroleum Engineering Faculty Research & Creative Works

The volumetric water content (VWC) of soil is a critical parameter in agriculture, as VWC strongly influences crop yield, provides nutrients to plants, and maintains the microbes that are needed for the biological health of the soil. Measuring VWC is difficult, as it is spatially and tempo-rally heterogeneous, and most agricultural producers use point measurements that cannot fully capture this parameter. Electrical conductivity (EC) is another soil parameter that is useful in agricul-ture, since it can be used to indicate soil salinity, soil texture, and plant nutrient availability. Soil EC is also very heterogeneous; measuring EC using conventional soil sampling …

Application Of Machine Learning In Geophysics: Ranking Teleseismic Shear Wave Splitting Measurements And Classifying Different Types Of Earthquakes, Yanwei Zhang

Doctoral Dissertations

"During the past decades, applications of Machine Learning have been explosively developed to solve various academic and industrial problems, and over-human performance has been shown in diverse areas. In geophysical research, Machine Learning, especially Convolutional Neural Network (CNN), has been applied in numerous studies and demonstrated considerable potential. In this study, we applied CNN to solve two geophysical problems, ranking teleseismic shear splitting (SWS) measurements and classifying different types of earthquakes.

For ranking teleseismic SWS measurements, we utilized a CNN-based method to automatically select reliable SWS measurements. The CNN was trained by human-verified teleseismic SWS measurements and tested using synthetic …

Enhancing Gravitational-Wave Science With Machine Learning, Elena Cuoco, Jade Powell, Marco Cavaglia, Kendall Ackley, For Full List Of Authors, See Publisher's Website.

Physics Faculty Research & Creative Works

Machine learning has emerged as a popular and powerful approach for solving problems in astrophysics. We review applications of machine learning techniques for the analysis of ground-based gravitational-wave (GW) detector data. Examples include techniques for improving the sensitivity of Advanced Laser Interferometer GW Observatory and Advanced Virgo GW searches, methods for fast measurements of the astrophysical parameters of GW sources, and algorithms for reduction and characterization of non-astrophysical detector noise. These applications demonstrate how machine learning techniques may be harnessed to enhance the science that is possible with current and future GW detectors.

Machine Learning Models And Big Data Tools For Evaluating Kidney Acceptance, Lirim Ashiku, Md Al-Amin, Sanjay Kumar Madria, Cihan H. Dagli

Computer Science Faculty Research & Creative Works

The rise of on-demand healthcare and the unprecedented growth of electronic health records has given rise to big data opportunities and data analysis using machine learning. The massive and disparate data management using conventional databases is incredibly challenging and expensive to manage. It often requires specialized analytical tools for developing advanced data-driven capabilities and performing data analytics. This paper explores the capability of an open-source framework 'Apache Spark' capable of processing large amounts of data on clusters of nodes to analyze Big data and integrate technologies to provide decision support systems in healthcare settings. Next, we propose machine learning models …

Improving The Data Quality In Gravitation-Wave Detectors By Mitigating Transient Noise Artifacts, Kentaro Mogushi

Doctoral Dissertations

“The existence of gravitational waves (GWs), small perturbations in spacetime produced by accelerating massive objects was first predicted in 1916 as solutions of Einstein’s Theory of General Relativity (Einstein, 1916). Detecting and analyzing GWs produced by sources allows us to probe astrophysical phenomena.

The era of GW astronomy began from the first direct detection of the coalescence of a binary black hole in 2015 by the collaboration of the advanced Laser Interferometer Gravitational-wave Observatory (LIGO) (Aasi et al., 2015) and advanced Virgo (Abbott et al., 2016a). Since 2015, LIGO-Virgo detected about 50 confident transient events of GW signals (Abbott et …

Exposure Assessment Of Emerging Contaminants: Rapid Screening And Modeling Of Plant Uptake, Majid Bagheri

Doctoral Dissertations

"With the advent of new chemicals and their increasing uses in every aspect of our life, considerable number of emerging contaminants are introduced to environment yearly. Emerging contaminants in forms of pharmaceuticals, detergents, biosolids, and reclaimed wastewater can cross plant roots and translocate to various parts of the plants. Long-term human exposure to emerging contaminants through food consumption is assumed to be a pathway of interest. Thus, uptake and translocation of emerging contaminants in plants are important for the assessment of health risks associated with human exposure to emerging contaminants. To have a better understanding over fate of emerging contaminants …

A Compact Wavelength Meter Using A Multimode Fiber, Ogbole Collins Inalegwu

Masters Theses

“Wavelength meters are very important for precision measurements of both pulses and continuous-wave optical sources. Conventional wavelength meters employ gratings, prisms, interferometers, and other wavelength-sensitive materials in their design. Here, we report a simple and compact wavelength meter based on a section of multimode fiber and a camera. The concept is to correlate the multimodal interference pattern (i.e., speckle pattern) at the end-face of a multimode fiber with the wavelength of the input lightsource. Through a series of experiments, specklegrams from the end face of a multimode fiber as captured by a charge-coupled device (CCD) camera were recorded; the images …

Neural Network Supervised And Reinforcement Learning For Neurological, Diagnostic, And Modeling Problems, Donald Wunsch Iii

Masters Theses

“As the medical world becomes increasingly intertwined with the tech sphere, machine learning on medical datasets and mathematical models becomes an attractive application. This research looks at the predictive capabilities of neural networks and other machine learning algorithms, and assesses the validity of several feature selection strategies to reduce the negative effects of high dataset dimensionality. Our results indicate that several feature selection methods can maintain high validation and test accuracy on classification tasks, with neural networks performing best, for both single class and multi-class classification applications. This research also evaluates a proof-of-concept application of a deep-Q-learning network (DQN) to …

Evaluation Of Standard And Semantically-Augmented Distance Metrics For Neurology Patients, Daniel B. Hier, Jonathan Kopel, Steven U. Brint, Donald C. Wunsch, Gayla R. Olbricht, Sima Azizi, Blaine Allen

Electrical and Computer Engineering Faculty Research & Creative Works

Background: Patient distances can be calculated based on signs and symptoms derived from an ontological hierarchy. There is controversy as to whether patient distance metrics that consider the semantic similarity between concepts can outperform standard patient distance metrics that are agnostic to concept similarity. The choice of distance metric can dominate the performance of classification or clustering algorithms. Our objective was to determine if semantically augmented distance metrics would outperform standard metrics on machine learning tasks.

Methods: We converted the neurological findings from 382 published neurology cases into sets of concepts with corresponding machine-readable codes. We calculated patient distances by …

Groundwater Storage Loss Associated With Land Subsidence In Western United States Mapped Using Machine Learning, Ryan G. Smith, Sayantan Majumdar

Geosciences and Geological and Petroleum Engineering Faculty Research & Creative Works

Land subsidence caused by groundwater extraction has numerous negative consequences, such as loss of groundwater storage and damage to infrastructure. Understanding the magnitude, timing, and locations of land subsidence, as well as the mechanisms driving it, is crucial to implementing mitigation strategies, yet the complex, nonlinear processes causing subsidence are difficult to quantify. Physical models relating groundwater flux to aquifer compaction exist but require substantial hydrological data sets and are time consuming to calibrate. Land deformation can be measured using interferometric synthetic aperture radar (InSAR) and GPS, but the former is computationally expensive to estimate at scale and is subject …

Studying The Effects Of Various Process Parameters On Early Age Hydration Of Single- And Multi-Phase Cementitious Systems, Rachel Cook

Doctoral Dissertations

”The hydration of multi-phase ordinary Portland cement (OPC) and its pure phase derivatives, such as tricalcium silicate (C₃S) and belite (ß-C₂S), are studied in the context varying process parameters -- for instance, variable water content, water activity, superplasticizer structure and dose, and mineral additive type and particle size. These parameters are studied by means of physical experiments and numerical/computational techniques, such as: thermodynamic estimations; numerical kinetic-based modelling; and artificial intelligence techniques like machine learning (ML) models. In the past decade, numerical kinetic modeling has greatly improved in terms of fitting experimental, isothermal calorimetry to kinetic-based modelling …

The Application Of Machine Learning Models In The Concussion Diagnosis Process, Sujit Subhash

Masters Theses

“Concussions represent a growing health concern and are challenging to diagnose and manage. Roughly four million concussions are diagnosed every year in the United States. Although research into the application of advanced metrics such as neuroimages and blood biomarkers has shown promise, they are yet to be implemented at a clinical level due to cost and reliability concerns. Therefore, concussion diagnosis is still reliant on clinical evaluations of symptoms, balance, and neurocognitive status and function. The lack of a universal threshold on these assessments makes the diagnosis process entirely reliant on a physician’s interpretation of these assessment scores. This study …

Predictive Modeling Of Webpage Aesthetics, Ang Chen

Masters Theses

"Aesthetics plays a key role in web design. However, most websites have been developed based on designers' inspirations or preferences. While perceptions of aesthetics are intuitive abilities of humankind, the underlying principles for assessing aesthetics are not well understood. In recent years, machine learning methods have shown promising results in image aesthetic assessment. In this research, we used machine learning methods to study and explore the underlying principles of webpage aesthetics"--Abstract, page iii.

Machine Learning Techniques Implementation In Power Optimization, Data Processing, And Bio-Medical Applications, Khalid Khairullah Mezied Al-Jabery

Doctoral Dissertations

"The rapid progress and development in machine-learning algorithms becomes a key factor in determining the future of humanity. These algorithms and techniques were utilized to solve a wide spectrum of problems extended from data mining and knowledge discovery to unsupervised learning and optimization. This dissertation consists of two study areas. The first area investigates the use of reinforcement learning and adaptive critic design algorithms in the field of power grid control. The second area in this dissertation, consisting of three papers, focuses on developing and applying clustering algorithms on biomedical data. The first paper presents a novel modelling approach for …

Classification Of Eeg Signals Of User States In Gaming Using Machine Learning, Chandana Mallapragada

Masters Theses

"In this research, brain activity of user states was analyzed using machine learning algorithms. When a user interacts with a computer-based system including playing computer games like Tetris, he or she may experience user states such as boredom, flow, and anxiety. The purpose of this research is to apply machine learning models to Electroencephalogram (EEG) signals of three user states -- boredom, flow and anxiety -- to identify and classify the EEG correlates for these user states. We focus on three research questions: (i) How well do machine learning models like support vector machine, random forests, multinomial logistic regression, and …

Care-Chair: Opportunistic Health Assessment With Smart Sensing On Chair Backrest, Rakesh Kumar

Masters Theses

"A vast majority of the population spend most of their time in a sedentary position, which potentially makes a chair a huge source of information about a person's daily activity. This information, which often gets ignored, can reveal important health data but the overhead and the time consumption needed to track the daily activity of a person is a major hurdle. Considering this, a simple and cost-efficient sensory system, named Care-Chair, with four square force sensitive resistors on the backrest of a chair has been designed to collect the activity details and breathing rate of the users. The Care-Chair system …