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Articles 3031 - 3060 of 3436

Full-Text Articles in Physical Sciences and Mathematics

Biological Implications Of A Discrete Mathematical Model For Collagen Deposition And Alignment In Dermal Wound Repair, J. C. Dallon, J. A. Sherratt, P. K. Maini, M. W. Ferguson Aug 2000

Biological Implications Of A Discrete Mathematical Model For Collagen Deposition And Alignment In Dermal Wound Repair, J. C. Dallon, J. A. Sherratt, P. K. Maini, M. W. Ferguson

Faculty Publications

We develop a novel mathematical model for collagen deposition and alignment during dermal wound healing. We focus on the interactions between fibroblasts, modelled as discrete entities, and a continuous extracellular matrix composed of collagen and a fibrin based blood clot. There are four basic interactions assumed in the model: fibroblasts orient the collagen matrix, fibroblasts produce and degrade collagen and fibrin and the matrix directs the fibroblasts and determines the speed of the cells. Several factors which influence the alignment of collagen are examined and related to current anti-scarring therapies using transforming growth factor " The most influential of these …

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Rescaling The Energy Function In Hopfield Networks, Tony R. Martinez, Xinchuan Zeng Jul 2000

Rescaling The Energy Function In Hopfield Networks, Tony R. Martinez, Xinchuan Zeng

Faculty Publications

In this paper we propose an approach that rescales the distance matrix of the energy function in the Hopfield network for solving optimization problems. We rescale the distance matrix by normalizing each row in the matrix and then adjusting the parameter for the distance term. This scheme has the capability of reducing the effects of clustering in data distributions, which is one of main reasons for the formation of invalid solutions. We evaluate this approach through a large number (20,000) simulations based on 200 randomly generated city distributions of the 10-city traveling salesman problem. The result shows that, compared to …

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The Inefficiency Of Batch Training For Large Training Sets, Tony R. Martinez, D. Randall Wilson Jul 2000

The Inefficiency Of Batch Training For Large Training Sets, Tony R. Martinez, D. Randall Wilson

Faculty Publications

Multilayer perceptrons are often trained using error backpropagation (BP). BP training can be done in either a batch or continuous manner. Claims have frequently been made that batch training is faster and/or more "correct" than continuous training because it uses a better approximation of the true gradient for its weight updates. These claims are often supported by empirical evidence on very small data sets. These claims are untrue, however, for large training sets. This paper explains why batch training is much slower than continuous training for large training sets. Various levels of semi-batch training used on a 20,000-instance speech recognition …

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Plasma Oscillations And Expansion Of An Ultracold Neutral Plasma, Scott D. Bergeson, S. Kulin, T. C. Killian, S. L. Rolston Jul 2000

Plasma Oscillations And Expansion Of An Ultracold Neutral Plasma, Scott D. Bergeson, S. Kulin, T. C. Killian, S. L. Rolston

Faculty Publications

We report the observation of plasma oscillations in an ultracold neutral plasma. With this collective mode we probe the electron density distribution and study the expansion of the plasma as a function of time. For classical plasma conditions, i.e., weak Coulomb coupling, the expansion is dominated by the pressure of the electron gas and is described by a hydrodynamic model. Discrepancies between the model and observations at low temperature and high density may be due to strong coupling of the electrons.

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Electronic Structure Of Bas And Boride Iii-V Alloys, Gus L. W. Hart, Alex Zunger Jun 2000

Electronic Structure Of Bas And Boride Iii-V Alloys, Gus L. W. Hart, Alex Zunger

Faculty Publications

Boron arsenide, the typically ignored member of the Group-III–V arsenide series BAs-AlAs-GaAs-InAs is found to resemble silicon electronically: its Γ conduction-band minimum is p-like (Γ15), not s-like (Γ1c), it has an X1c-like indirect band gap, and its bond charge is distributed almost equally on the two atoms in the unit cell, exhibiting nearly perfect covalency. The reasons for these are tracked down to the anomalously low atomic p orbital energy in the boron and to the unusually strong s–s repulsion in BAs relative to most other Group-III–V compounds. We find unexpected valence-band offsets of BAs with respect to GaAs and …

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Intelligent Selection Tools, William A. Barrett, Eric N. Mortensen, L. Jack Reese Jun 2000

Intelligent Selection Tools, William A. Barrett, Eric N. Mortensen, L. Jack Reese

Faculty Publications

Intelligent Scissors and Intelligent Paint are complementary interactive image segmentation tools that allow a user to quickly and accurately select objects of interest. This demonstration provides a means for participants to experience the dynamic nature of these tools.

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Bounding Interval Rational Bézier Curves With Interval Polynomial Bézier Curves, Thomas W. Sederberg, Falai Chen, Wenping Lou Apr 2000

Bounding Interval Rational Bézier Curves With Interval Polynomial Bézier Curves, Thomas W. Sederberg, Falai Chen, Wenping Lou

Faculty Publications

In this paper, we put forward and study the problem of bounding an interval rational Bézier curve with an interval polynomial Bézier curve. We propose three different methods—Hybrid Method, Perturbation Method and Linear Programming Method to solve this problem. Examples are illustrated to compare the three different methods. The empirical results show that the Perturbation Method and the Linear Programming Method produce much tighter bounds than the Hybrid Method, though they are computationally several times more expensive.

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Average Energy Flow Of Optical Pulses In Dispersive Media, Scott Glasgow, Michael Ware, Justin Peatross Mar 2000

Average Energy Flow Of Optical Pulses In Dispersive Media, Scott Glasgow, Michael Ware, Justin Peatross

Faculty Publications

The arrival time of a light pulse at a point in space is defined using a time expectation integral over the Poynting vector. The delay between pulse arrival times at two distinct points is shown to consist of two parts: a spectral superposition of group delays (inverse of group velocity) and a delay due to spectral reshaping via absorption or amplification. The result provides a context wherein group velocity is always meaningful even for broad band pulses and when the group velocity is superluminal or negative. The result imposes luminality on sharply defined pulses.

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Designing Human-Centered Automation: Tradeoffs In Collision Avoidance System Design, Michael A. Goodrich, Erwin R. Boer Mar 2000

Designing Human-Centered Automation: Tradeoffs In Collision Avoidance System Design, Michael A. Goodrich, Erwin R. Boer

Faculty Publications

Technological advances have made plausible the design of automated systems that share responsibility with a human operator. The decision to use automation to assist or replace a human operator in safety-critical tasks must account for not only the technological capabilities of the sensor and control subsystems, but also the autonomy, capabilities, and preferences of the human operator. By their nature, such human-centered automation problems have multiple attributes: an attribute reflecting human goals and capabilities, and an attribute reflecting automation goals and capabilities. Although good theories exist that describe portions of human behavior generation, in the absence of a general theory …

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Learning Quantum Operators, Dan A. Ventura Mar 2000

Learning Quantum Operators, Dan A. Ventura

Faculty Publications

Consider the system Fx = w where F is unknown. We examine the possibility of learning the operator F inductively, drawing analogies with ideas from classical computational learning.

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Alternate Path Routing For Multicast, Daniel Zappala Mar 2000

Alternate Path Routing For Multicast, Daniel Zappala

Faculty Publications

Alternate path routing has been well-explored in telecommunication networks as a means of decreasing the call blocking rate and increasing network utility. However, aside from some work applying these concepts to unicast flows, alternate path routing has received little attention in the Internet community. We describe and evaluate an architecture for alternate path routing for multicast flows. For path installation, we design a receiver-oriented alternate path protocol and prove that it reconfigures multicast trees without introducing loops. For path computation, we propose a scalable local search heuristic that allows receivers to find alternate paths using only partial network information. We …

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Electronic Structure Of Cu1-Xnixrh2s4 And Curh2se4: Band-Structure Calculations, X-Ray Photoemission, And Fluorescence Measurements, Gus L. W. Hart, W. E. Pickett, E. Z. Kurmaev, M. Neumann, D. Hartmann, A. Moewes, D. L. Ederer, R. Endoh, K. Taniguchi, S. Nagata Feb 2000

Electronic Structure Of Cu1-Xnixrh2s4 And Curh2se4: Band-Structure Calculations, X-Ray Photoemission, And Fluorescence Measurements, Gus L. W. Hart, W. E. Pickett, E. Z. Kurmaev, M. Neumann, D. Hartmann, A. Moewes, D. L. Ederer, R. Endoh, K. Taniguchi, S. Nagata

Faculty Publications

The electronic structure of spinel-type Cu1-xNixRh2S4 (x=0.0, 0.1, 0.3, 0.5, 1.0) and CuRh2Se4 compounds has been studied by means of x-ray photoelectron (SPS) and fluorescent spectroscopy. Cu L3, Ni L3, S L2,3, and Se M2,3 x-ray emission spectra (XES) were measured near thresholds at Beamline 8.0 of the Lawrence Berkeley Laboratory's Advanced Light Source. XES measurements of the constituent atoms of these compounds, reduced to the same binding energy scale, are found to be in excellent agreement with XPS valence bands. The calculated XES spectra which include dipole matrix elements show that the partial density of states reproduce experimental spectra …

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Numerical Aspects Of Discrete And Continuum Hybrid Models In Cell Biology, J. C. Dallon Feb 2000

Numerical Aspects Of Discrete And Continuum Hybrid Models In Cell Biology, J. C. Dallon

Faculty Publications

In this paper we introduce a method of modeling which mixes continuum and discrete variables, and explain two models in cell biology that use this method. The first application deals with wound healing, more specifically the collagen alignment in scar tissue formation and the second models early aggregation in the cellular slime mold Dictyostelium discoideum. We solve these models using numerical techniques similar to the particle-in-cell method which requires that the discrete and continuum variables are interpolated one to the other. The implementational and numerical details are discussed in an informal and practical manner with particular attention given to the …

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A Mathematical Model For Spatially Varying Extracellular Matrix, J. C. Dallon, J. A. Sherratt Jan 2000

A Mathematical Model For Spatially Varying Extracellular Matrix, J. C. Dallon, J. A. Sherratt

Faculty Publications

Orientation of extracellular matrix fibers in the skin is a key ingredient of tissue appearance and function, and differences in fiber alignment are one of the main distinctions between scar tissue and normal skin. In this paper, the authors develop a mathematical model for alignment of collagen fibers and the fibroblast cells that remodel them; the model extends previous work in which spatial variation was excluded. Numerical simulations of the model are presented, which show spatial variations in alignment over long transients, but with spatially uniform behavior in the long term. This is investigated further via asymptotic analysis, using the …

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Estimating Tessellation Parameter Intervals For Rational Curves And Surfaces, Thomas W. Sederberg, Jianmin Zheng Jan 2000

Estimating Tessellation Parameter Intervals For Rational Curves And Surfaces, Thomas W. Sederberg, Jianmin Zheng

Faculty Publications

This paper presents a method for determining a priori a constant parameter interval with which a rational curve or surface can be tessellated such that the deviation of the curve or surface from its piecewise linear approximation is within a specified tolerance. The parameter interval is estimated based on information about the second order derivatives in the homogeneous coordinates, instead of using affine coordinates directly. This new step size can be found with roughly the same amount of computation as the step size presented in [Cheng 1992], though it can be proven to always be larger than Cheng's step size. …

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An Extension Of Zermelo's Model For Ranking By Paired Comparisons, Christopher P. Grant, Gregory R. Conner Jan 2000

An Extension Of Zermelo's Model For Ranking By Paired Comparisons, Christopher P. Grant, Gregory R. Conner

Faculty Publications

In 1929, Zermelo proposed a probabilistic model for ranking by paired comparisons and showed that this model produces a unique ranking of the objects under consideration when the outcome matrix is irreducible. When the matrix is reducible, the model may yield only a partial ordering of the objects. In this paper, we analyse a natural extension of Zermelo's model resulting from a singular perturbation. We show that this extension produces a ranking for arbitrary (nonnegative) outcome matrices and retains several of the desirable properties of the original model. In addition, we discuss computational techniques and provide examples of their use.

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Creation Of An Ultracold Neutral Plasma, Scott D. Bergeson, T. C. Killian, S. Kulin, L. A. Orozco, C. Orzel, S. L. Rolston Dec 1999

Creation Of An Ultracold Neutral Plasma, Scott D. Bergeson, T. C. Killian, S. Kulin, L. A. Orozco, C. Orzel, S. L. Rolston

Faculty Publications

We report the creation of an ultracold neutral plasma by photoionization of laser-cooled xenon atoms. The charge carrier density is as high as 2×10^9 cm^-3, and the temperatures of electrons and ions are as low as 100 mK and 10 uK, respectively. Plasma behavior is evident in the trapping of electrons by the positive ion cloud when the Debye screening length becomes smaller than the size of the sample. We produce plasmas with parameters such that both electrons and ions are strongly coupled.

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Dual Function Euv Multilayer Mirrors For The Image Mission, David D. Allred, R. Steven Turley, Matthew B. Squires Nov 1999

Dual Function Euv Multilayer Mirrors For The Image Mission, David D. Allred, R. Steven Turley, Matthew B. Squires

Faculty Publications

We have developed a new family of EUV multilayer mirror coatings using uranium. Using this approach we have coated a set of six mirrors for the EUV Imager, a component of the IMAGE mission. This mission is a Medium Explorer (MIDEX) program, which is scheduled for launch early in 2000. The EUV Imager will study the distribution of He+ in the Earth's plasmasphere by detecting its resonantly scattered emission at 30.4 nm (41 eV) and will produce images of the structure and dynamics of the cold plasma on a global scale. There is, however, a bright at 58.4 nm (21 …

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Selective Excitation And Thermal Quenching Of The Yellow Luminescence Of Gan, John S. Colton, P. Y. Yu, K. L. Teo, E. R. Weber, P. Perlin, I. Grzegory, K. Uchida Nov 1999

Selective Excitation And Thermal Quenching Of The Yellow Luminescence Of Gan, John S. Colton, P. Y. Yu, K. L. Teo, E. R. Weber, P. Perlin, I. Grzegory, K. Uchida

Faculty Publications

We report the observation of narrower structures in the yellow luminescence of bulk and thin-film n-type GaN, using the technique of selective excitation. These fine structures exhibit thermal quenching associated with an activated behavior. We attribute these fine structures to phonons and electronic excitations of a shallow donor-deep acceptor complex, and determine its activation energy for delocalization. Our results suggest that in addition to distant donor-acceptor pairs, the yellow luminescence can also involve emission complexes of shallow donors and deep acceptors.

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Phonon And Elastic Instabilities In Moc And Mon, Gus L. W. Hart, Barry M. Klein Oct 1999

Phonon And Elastic Instabilities In Moc And Mon, Gus L. W. Hart, Barry M. Klein

Faculty Publications

We present several results related to the instability of MoC and MoN in the B1 (sodium chloride) structure. These compounds were proposed as potential superconductors with moderately high transition temperatures. We show that the elastic instability in B1-structure MoN, demonstrated several years ago, persists at elevated pressures, thus offering little hope of stabilizing this material without chemical doping. For MoC, another material for which stoichiometric fabrication in the B1 structure has not proven possible, we find that all of the cubic elastic constants are positive, indicating elastic stability. Instead, we find X-point phonon instabilities in MoC (and in MoN as …

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Mathematical Modelling Of Extracellular Matrix Dynamics Using Discrete Cells: Fiber Orientation And Tissue Regeneration, J. C. Dallon, J. A. Sherratt, P. K. Maini Aug 1999

Mathematical Modelling Of Extracellular Matrix Dynamics Using Discrete Cells: Fiber Orientation And Tissue Regeneration, J. C. Dallon, J. A. Sherratt, P. K. Maini

Faculty Publications

Matrix orientation plays a crucial role in determining the severity of scar tissue after dermal wounding. We present a model framework which allows us to examine the interaction of many of the factors involved in orientation and alignment. Within this framework, cells are considered as discrete objects, while the matrix is modeled as a continuum. Using numerical simulations, we investigate the effect on alignment of changing cell properties and of varying cell interactions with collagen and fibrin.

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The Little Neuron That Could, Timothy L. Andersen, Tony R. Martinez Jul 1999

The Little Neuron That Could, Timothy L. Andersen, Tony R. Martinez

Faculty Publications

SLPs (single layer perceptrons) oflen exhibit reasonable generalization performance on many problems of interest. However, due to the well known limitations of SLPs very little effort has been made to improve their performance. This paper proposes a method for improving the performance of SLPs called "wagging" (weight averaging). This method involves training several different SLPs on the same training data, and then averaging their weights to obtain a single SLP. The performance of the wagged SLP is compared with other more complex learning algorithms (bp, c4.5, ibl, MML, etc) on 15 data sets from real world problem domains. Surprisingly, the …

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A Neural Model Of Centered Tri-Gram Speech Recognition, Tony R. Martinez, Dan A. Ventura, D. Randall Wilson, Brian Moncur Jul 1999

A Neural Model Of Centered Tri-Gram Speech Recognition, Tony R. Martinez, Dan A. Ventura, D. Randall Wilson, Brian Moncur

Faculty Publications

A relaxation network model that includes higher order weight connections is introduced. To demonstrate its utility, the model is applied to the speech recognition domain. Traditional speech recognition systems typically consider only that context preceding the word to be recognized. However, intuition suggests that considering both preceding context as well as following context should improve recognition accuracy. The work described here tests this hypothesis by applying the higher order relaxation network to consider both precedes and follows context in speech recognition. The results demonstrate both the general utility of the higher order relaxation network as well as its improvement over …

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Combining Cross-Validation And Confidence To Measure Fitness, Tony R. Martinez, D. Randall Wilson Jul 1999

Combining Cross-Validation And Confidence To Measure Fitness, Tony R. Martinez, D. Randall Wilson

Faculty Publications

Neural network and machine learning algorithms often have parameters that must be tuned for good performance on a particular task. Leave-one-out cross-validation (LCV) accuracy is often used to measure the fitness of a set of parameter values. However, small changes in parameters often have no effect on LCV accuracy. Many learning algorithms can measure the confidence of a classification decision, but often confidence alone is an inappropriate measure of fitness. This paper proposes a combined measure of Cross- Validation and Confidence (CVC) for obtaining a continuous measure of fitness for sets of parameters in learning algorithms. This paper also proposes …

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Cross Validation And Mlp Architecture Selection, Timothy L. Andersen, Tony R. Martinez Jul 1999

Cross Validation And Mlp Architecture Selection, Timothy L. Andersen, Tony R. Martinez

Faculty Publications

The performance of cross validation (CV) based MLP architecture selection is examined using 14 real world problem domains. When testing many different network architectures the results show that CV is only slightly more likely than random to select the optimal network architecture, and that the strategy of using the simplest available network architecture performs better than CV in this case. Experimental evidence suggests several reasons for the poor performance of CV. In addition, three general strategies which lead to significant increase in the performance of CV are proposed. While this paper focuses on using CV to select the optimal MLP …

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Extending The Power And Capacity Of Constraint Satisfaction Networks, Tony R. Martinez, Xinchuan Zeng Jul 1999

Extending The Power And Capacity Of Constraint Satisfaction Networks, Tony R. Martinez, Xinchuan Zeng

Faculty Publications

This work focuses on improving the Hopfield network for solving optimization problems. Although much work has been done in this area, the performance of the Hopfield network is still not satisfactory in terms of valid convergence and quality of solutions. We address this issue in this work by combing a new activation function (EBA) and a new relaxation procedure (CR) in order to improve the performance of the Hopfield network. Each of EBA and CR has been individually demonstrated capable of substantially improving the performance. The combined approach has been evaluated through 20,000 simulations based on 200 randomly generated city …

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The Robustness Of Relaxation Rates In Constraint Satisfaction Networks, Tony R. Martinez, Dan A. Ventura, D. Randall Wilson, Brian Moncur Jul 1999

The Robustness Of Relaxation Rates In Constraint Satisfaction Networks, Tony R. Martinez, Dan A. Ventura, D. Randall Wilson, Brian Moncur

Faculty Publications

Constraint satisfaction networks contain nodes that receive weighted evidence from external sources and/or other nodes. A relaxation process allows the activation of nodes to affect neighboring nodes, which in turn can affect their neighbors, allowing information to travel through a network. When doing discrete updates (as in a software implementation of a relaxation network), a goal net or goal activation can be computed in response to the net input into a node, and a relaxation rate can then be used to determine how fast the node moves from its current value to its goal value. An open question was whether …

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A Comparison Of Eclectic Learning And Stagger, J. Cory Barker, Jargalsaihan Batsaihan Jul 1999

A Comparison Of Eclectic Learning And Stagger, J. Cory Barker, Jargalsaihan Batsaihan

Faculty Publications

This project compares two machine-learning methods, Stagger and Eclectic on their classification correctness. Both systems were tested with real-world data sets previously used and tested in other machine learning and statistical literature. The Eclectic System performed better than Stagger on every data set.

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Model Predictive Satisficing Fuzzy Logic Control, Richard L. Frost, Michael A. Goodrich, Wynn C. Stirling Jun 1999

Model Predictive Satisficing Fuzzy Logic Control, Richard L. Frost, Michael A. Goodrich, Wynn C. Stirling

Faculty Publications

Model-predictive control, which is an alternative to conventional optimal control, provides controller solutions to many constrained and nonlinear control problems. However, even when a good model is available, it may be necessary for an expert to specify the relationship between local model predictions and global system performance. We present a satisficing fuzzy logic controller that is based on a receding control horizon, but which employs a fuzzy description of system consequences via model predictions. This controller considers the gains and losses associated with each control action, is compatible with robust design objectives, and permits flexible defuzzifier design. We demonstrate the …

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Multiscale Image Registration Using Scale Trace Correlation, Bruce B. Hansen, Bryan S. Morse Jun 1999

Multiscale Image Registration Using Scale Trace Correlation, Bruce B. Hansen, Bryan S. Morse

Faculty Publications

This paper presents a method for registering images at different magnifications (scales) by treating the problem not only as one of scaling the image coordinates but also as one inherently involving multiresolution information. While some existing methods for multiresolution registration do consider the way the resolution (scale) affects the image, they often consider the image one scale at a time, using geometric properties within that scale. Others use multiscale information, usually to produce more robust results, but only to register same-magnification images (e.g., stereo). A scale trace is the set of values that a single pixel takes on as magnification …

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