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Oceanography and Atmospheric Sciences and Meteorology

William & Mary

Theses/Dissertations

2009

Articles 1 - 13 of 13

Full-Text Articles in Physical Sciences and Mathematics

Anthropogenic Causes Of Copepod Mortality And Bacterial Decomposition Of Copepod Carcasses, Samantha L. Bickel Jan 2009

Anthropogenic Causes Of Copepod Mortality And Bacterial Decomposition Of Copepod Carcasses, Samantha L. Bickel

Dissertations, Theses, and Masters Projects

Although zooplankton carcasses can be quite prevalent within aquatic systems, they have largely been overlooked in most zooplankton population studies. Anthropogenic stressors can potentially increase the overall abundance of carcasses on a local scale. Once a carcass is present within a system, the fate of its biomass is of considerable interest as it may be remineralized within the water column or transported to depth. Through the collection of field samples I assessed the possibility of an anthropogenic stressor (boat-generated turbulence) as a potential source of nonconsumptive mortality. I also conducted a series of laboratory experiments to monitor the decomposition of …


Development Of A Storm Surge Model Using A High-Resolution Unstructured Grid Over A Large Domain, Tao Shen Jan 2009

Development Of A Storm Surge Model Using A High-Resolution Unstructured Grid Over A Large Domain, Tao Shen

Dissertations, Theses, and Masters Projects

A quasi-3D storm surge modeling system was developed for forecasting the storm surge and inundation in the Chesapeake Bay. The system was constructed with one large unstructured grid covering the Atlantic Coast from Nova Scotia to Florida and a smaller, limited domain unstructured grid covering the Chesapeake Bay, Virginia Beach, Hampton Roads and the adjacent continental shelf regions. It was demonstrated that, with the large domain grid, the model could simulate the hurricane induced storm surge reasonably well using astronomical tide at the open boundary condition and in turn, provide boundary condition for the limited domain model. Since the difficulty …


Hydrography And Phytoplankton Distribution In The Amundsen And Ross Seas, Glaucia M. Fragoso Jan 2009

Hydrography And Phytoplankton Distribution In The Amundsen And Ross Seas, Glaucia M. Fragoso

Dissertations, Theses, and Masters Projects

The phytoplankton of the Ross Sea have been intensively studied during the last decade, as opposed to the Amundsen Sea, where virtually nothing is known about phytoplankton taxonomy and distribution. Blooms in the Ross Sea are usually composed of diatoms and the prymnesiophyte Phaeocystis antarctica; diatoms are often dominant in strongly stratified waters during the summer, whereas P. antarctica usually dominates in less stratified waters in the south-central polynya during spring. This study focused on understanding the environmental variables that influence the spatial patterns of phytoplankton assemblages during late summer and early fall, 2007, and late spring and early summer, …


Nutrient Loading And System Response In The Coastal Lagoons Of The Delmarva, Juliette Christina Poleto Giordano Jan 2009

Nutrient Loading And System Response In The Coastal Lagoons Of The Delmarva, Juliette Christina Poleto Giordano

Dissertations, Theses, and Masters Projects

No abstract provided.


Variability In Juvenile Growth, Mortality, Maturity, And Abundance Of American Shad And Blueback Herring In Virginia, Troy D. Tuckey Jan 2009

Variability In Juvenile Growth, Mortality, Maturity, And Abundance Of American Shad And Blueback Herring In Virginia, Troy D. Tuckey

Dissertations, Theses, and Masters Projects

Young-of-year (YOY) population dynamics of American shad and blueback herring in Virginia's rivers were examined with an emphasis on variability in growth and mortality rates. In addition, an analysis was conducted to relate juvenile abundance indices of American shad to adult indices to establish a stock-recruitment relationship. to accomplish the stock recruitment relationship, an additional study that examined maturation schedules and inter-annual variability in maturation schedules among stocks was performed. Results of population dynamics studies found that growth and mortality rates of American shad and blueback herring varied by river and year and that conspecific abundance was an important factor …


Numerical Modeling Of Eutrophication Dynamics In The Shallow Coastal Ecosystem: A Case Study In The Maryland And Virginia Coastal Bays, Taiping Wang Jan 2009

Numerical Modeling Of Eutrophication Dynamics In The Shallow Coastal Ecosystem: A Case Study In The Maryland And Virginia Coastal Bays, Taiping Wang

Dissertations, Theses, and Masters Projects

Shallow coastal bays and lagoons (mean depths <2-3 meters) are important buffer zones and links between terrestrial and deep marine ecosystems. They are inherently vulnerable to eutrophication, and are normally dominated by benthic primary producers such as seagrass, benthic micro- and macroalgae. There is an urgent need for quantitative models that are specifically designed for studying eutrophication dynamics in shallow coastal ecosystems. In this study, a hydrodynamic and water quality modeling system consisting of the hydrodynamic model UnTRIM and the water quality model CE-QUAL-ICM was applied to a representative shallow coastal bay ecosystem, the Maryland and Virginia Coastal Bays (MVCBs). A high-resolution unstructured model grid was generated to resolve the complex geometry. to address the important role played by benthic macroalgae, a benthic macroalgal module, which assimilated macroalgal kinetics from literature and recent laboratory studies, was incorporated into the water quality model framework. The module includes two representative macroalgal species, Ulva lactuca and Gracilaria vermiculophylla , common in the MVCBs, and employs the internal nutrient-limited growth kinetics proposed by Droop. The numerical modeling system has been calibrated against a comprehensive field monitoring data collected by the Maryland Department of Natural Resources in the MVCBs. The data include water level, current velocity, salinity, and major water quality variables, such as chlorophyll a, dissolved oxygen, and nutrients. The calibrated hydrodynamic model was used to calculate the physical transport time scales. The model estimated flushing time for the entire system is on the order of 2-3 months, which are much longer than typical time scales required by most biological processes. In addition, the local residence time is found to be extremely variable throughout the system. Depending on locations, the local residence time can vary from 0 to more than 200 days. The calculated transport time scales were further compared with spatial water quality distributions in the system. The comparisons demonstrate that physical circulations could substantially modulate biological processes in the system. By using the Droop equation, the benthic macroalgae's unique property, the so-called luxury uptake, was satisfactorily captured. Furthermore, the characteristic boom-and-bust life cycle of benthic macroalgae was qualitatively simulated using a box model. The expanded water quality model that includes the benthic macroalgal module reproduced both temporal and spatial distributions of observed benthic macroalgae and major water quality variables reasonably well in the MVCBs. The model results indicate that benthic macroalgae are highly important in regulating ecosystem metabolism in areas where they are abundant. Moreover, spring phytoplankton bloom was substantially suppressed when benthic macroalgae were present. The incorporation of a benthic macroalgal module also improved the model's predictive capability in simulating dissolved oxygen in shallow ecosystems affected by benthic macroalgae. In terms of nutrient budget, the model estimated that benthic macroalgae retain approximately 10% of annual nonpoint source nitrogen inputs from the watershed based on the simulation of year 2004. This is lower than that contributed by benthic microalgae reported in other shallow coastal bays such as the Lynnhaven Bay. It is suspected that the restricted distribution of benthic macroalgae in the MVCBs limited their role from the whole bay perspective. With the incorporation of a benthic macroalgae module, the overall water quality model prediction capability is improved.


Assessing Genetic Variation Within And Among Native Populations And Hatchery Stocks Of Crassostrea Ariakensis Using Microsatellite Markers, Jie Xiao Jan 2009

Assessing Genetic Variation Within And Among Native Populations And Hatchery Stocks Of Crassostrea Ariakensis Using Microsatellite Markers, Jie Xiao

Dissertations, Theses, and Masters Projects

Assessing genetic variation within and among native populations and hatchery stocks of Crassostrea ariakensis using microsatellite markers In response to the dramatic decline of eastern oyster (Crassostrea virginica) populations in the Chesapeake Bay, introduction of the non-native Asian oyster Crassostrea ariakensis has been proposed. Currently several hatchery stocks of C. ariakensis, derived from a few wild populations along the coast of Japan and China, are being maintained in U.S. hatcheries in the Pacific northwest and on the east coast. In recent years, as the risks of the proposed introduction are being assessed, these hatchery animals have been widely used for …


Continental Shelf Sediment Transport And Depositional Processes On An Energetic, Active Margin: The Waiapu River Shelf, New Zealand, Yanxia Ma Jan 2009

Continental Shelf Sediment Transport And Depositional Processes On An Energetic, Active Margin: The Waiapu River Shelf, New Zealand, Yanxia Ma

Dissertations, Theses, and Masters Projects

The Waiapu River drains a small mountainous basin, characterized by steep terrain, heavy rainfall, and unconsolidated soft Tertiary mudstone and siltstone. These factors, combined with heavy deforestation over the past 100 years have created one of the world's highest sediment yields. Water discharge of the Waiapu River is very episodic over both inter- and intra-annual timescales, and almost all of the discharge is associated with floods brought by cyclonic storms. The Waiapu River drains an active margin that has a narrow shelf and steep slope. Marine conditions on the Waiapu continental shelf are very energetic, with strong waves as well …


Mortality Of Diamondback Terrapins In Blue Crab Traps: Population Changes And Conservation In Southeastern Virginia, Megan Ann Rook Jan 2009

Mortality Of Diamondback Terrapins In Blue Crab Traps: Population Changes And Conservation In Southeastern Virginia, Megan Ann Rook

Dissertations, Theses, and Masters Projects

No abstract provided.


A Numerical Modeling Study On Barotropic And Baroclinic Responses Of The Chesapeake Bay To Hurricane Events, Kyoung-Ho Cho Jan 2009

A Numerical Modeling Study On Barotropic And Baroclinic Responses Of The Chesapeake Bay To Hurricane Events, Kyoung-Ho Cho

Dissertations, Theses, and Masters Projects

The barotropic and baroclinic responses of the Chesapeake Bay to forcings from two hurricanes were investigated by using unstructured-grid three-dimensional hydrodynamic models. The model domain includes Chesapeake Bay proper, the tributaries, and its extended continental shelf in the mid-Atlantic Bight. Two hurricanes were studied: Hurricane Floyd of September, 1999 and Hurricane Isabel of September, 2003, both of which made landfall within 100 km of the Chesapeake Bay mouth. Hurricane Floyd in 1999 passed through the entrance of the Bay from southwest to northeast along the coastlines of Virginia as a Category 1 storm, whereas Hurricane Isabel in 2003 made landfall …


Investigating The Relationships Between Recruitment Indices And Estimates Of Adult Abundance For Striped Bass, Weakfish, And Atlantic Croaker, Justine R. Woodward Jan 2009

Investigating The Relationships Between Recruitment Indices And Estimates Of Adult Abundance For Striped Bass, Weakfish, And Atlantic Croaker, Justine R. Woodward

Dissertations, Theses, and Masters Projects

Establishing the relationships between recruitment indices and estimates of adult abundance using fishery-independent data continues to remain one of the principal challenges faced by fisheries scientists due to the lack of concurrent monitoring programs designed to target different life stages of the same species. In Chesapeake Bay, however, multiple, fishery-independent surveys currently monitor the relative abundance of YOY and adult fishes. Using the available data from these surveys, the relationships between estimates of relative abundance for young-of-year and adults of striped bass (Morone saxatilis), weakfish (Cynoscion regalis), and Atlantic croaker (Micropogonias undulatus) were examined. Year-class strength was reflected in subsequent …


Egg Capsule Hatching Success In Rapana Venosa And Urosalpinx Cinerea In Relation To Temperature And Salinity, Stephanie M. Gera Jan 2009

Egg Capsule Hatching Success In Rapana Venosa And Urosalpinx Cinerea In Relation To Temperature And Salinity, Stephanie M. Gera

Dissertations, Theses, and Masters Projects

The maintenance of a population within the geographic range is influenced by the physical and environmental conditions under which breeding occurs. It is hypothesized that environmental conditions under which egg capsules are successfully hatched will influence the range of potential habitat of the invasive veined rapa whelk, Rapana venosa, and the native Atlantic oyster drill, Urosalpinx cinerea, in the Chesapeake Bay. This study examines the environmental conditions of temperature, salinity, and the time of deposition of egg capsules within the reproductive period (here quantified as cumulative number of day degrees at egg capsule deposition). The range of R. venosa and …


Using An Occupancy Modeling Framework To Test The Effects Of Habitat Variables On Pond Occupancy Of Mabee's Salamander (A Mabeei) And Marbled Salamander (A Opacum), Christy Michelle Fairman Jan 2009

Using An Occupancy Modeling Framework To Test The Effects Of Habitat Variables On Pond Occupancy Of Mabee's Salamander (A Mabeei) And Marbled Salamander (A Opacum), Christy Michelle Fairman

Dissertations, Theses, and Masters Projects

No abstract provided.