Physical Sciences and Mathematics Commons^™

Drought Affects Sex Ratio And Growth Of Painted Turtles In A Long-Term Study In Nebraska, Larkin A. Powell, Ellen P. Dolph, Charrissa R. Neil

School of Natural Resources: Faculty Publications

Climate forecasts suggest the Great Plains of North America have increased risk of droughts during global warming. Environmental factors have potential to influence turtle populations in aquatic habitats through temperature-dependent sex determination and influences on food availability. Long-term studies are critical to evaluate the influence of climatic variation on turtles. We used a 12-year set of mark-recapture data collected from painted turtles (Chrysemys picta, n = 162) in a pond in Keith County, Nebraska during 2005–2016 to assess variation in sex ratio and growth dynamics. Southwest Nebraska experienced two periods of drought during our study (Palmer Hydrologic Drought …

Pan-Arctic Soil Moisture Control On Tundra Carbon Sequestration And Plant Productivity, Donatella Zona, Peter M. Lafleur, Koen Hufkens, Beniamino Gioli, Barbara Bailey, George Burba, Eugénie S. Euskirchen, Jennifer D. Watts, Kyle A. Arndt, Mary Farina, John S. Kimball, Martin Heimann, Mathias Göckede, Martijn Pallandt, Torben R. Christensen, Mikhail Mastepanov, Efrén López-Blanco, Albertus J. Dolman, Roisin Commane, Charles E. Miller, Josh Hashemi, Lars Kutzbach, David Holl, Julia Boike, Christian Wille, Torsten Sachs, Aram Kalhori, Elyn R. Humphreys, Oliver Sonnentag, Gesa Meyer, Gabriel H. Gosselin, Philip Marsh, Walter C. Oechel

Daugherty Water for Food Global Institute: Faculty Publications

Long-term atmospheric CO₂ concentration records have suggested a reduction in the positive effect of warming on high-latitude carbon uptake since the 1990s. A variety of mechanisms have been proposed to explain the reduced net carbon sink of northern ecosystems with increased air temperature, including water stress on vegetation and increased respiration over recent decades. However, the lack of consistent long-term carbon flux and in situ soil moisture data has severely limited our ability to identify the mechanisms responsible for the recent reduced carbon sink strength. In this study, we used a record of nearly 100 site-years of eddy covariance …

Assessing Functional Biodiversity For The Future Of Plants, Planet, And People, Ali Loker

Doctor of Plant Health Program: Dissertations and Student Research

Biodiversity plays a critical role in supporting life in global ecosystems and its links to ecosystem services and sustainability are recognized by scientific and non-scientific communities. Growing awareness of the importance of biodiversity is accelerated by discussions of its loss, and how to design interventions to conserve and mitigate a biodiversity crisis. Stakeholders are funding and implementing assessment strategies at various scales to help direct conservation efforts. There is also growing interest in measuring and communicating biodiversity outcomes.

Functional biodiversity characterizes the multiplicity of life forms into groups based on their diverse contributions to natural and agro-ecosystems. Assessing functional biodiversity …

Simulation Of Monthly Mean And Monthly Base Flow Of Streamflow Using Random Forests For The Mississippi River Alluvial Plain, 1901 To 2018, Benjamin J. Dietsch, William H. Asquith, Brian K. Breaker, Stephen M. Westenbroek, Wade H. Kress

United States Geological Survey: Water Reports and Publications

Improved simulations of streamflow and base flow for selected sites within and adjacent to the Mississippi River Alluvial Plain area are important for modeling groundwater flow because surface-water flows have a substantial effect on groundwater levels. One method for simulating streamflow and base flow, random forest (RF) models, was developed from the data at gaged sites and, in turn, was used to make monthly mean streamflow and base-flow predictions at 162 ungaged sites in the study area. Daily streamflow observations and computed base flow from 247 streamgages were used as the basis for the development of these RF models. RF …

Remembering Paul Johnsgard, Linda R, Brown, Josef Kren

Zea E-Books Collection

Paul A. Johnsgard (1931–2021) was a friend of many, an artist, prolific author, teacher, and humble admirer of all living creatures. It was impossible to find someone at Nebraska Audubon Society or Nebraska Ornithologists’ Union meetings who did not know Paul Johnsgard. His more than 100 published books made him known not just in a community of ornithologists, birdwatchers, and bird lovers in the United States but also abroad. He was a world-renowned ornithologist and naturalist who remained deeply embedded in his local culture and its prairie environment.

We invited about 75 people to write a short memory of Paul. …

Importance Of Snowmelt On Soil Nitrate Leaching To Groundwater – A Model Study, Sahila Beegum, Arindam Malakar, Chittaranjan Ray, Daniel D. Snow

Nebraska Water Center: Faculty Publications

The movement of nitrate to surface water bodies during snow accumulation and melting has been extensively studied, but there are only limited studies on the influence of snow processes on nitrate leaching to groundwater. The present study investigated the impact of snow processes on nitrate leaching to groundwater based on a simulation modeling approach using HYDRUS-1D. HYDRUS-1D model has a temperature threshold-based snow model in addition to water, solute, and heat simulation components. The snow component in HYDRUS-1D was previously not applied to snow simulation studies since the method does not consider a detailed physical and process-based representation of snow …

Gloria - A Globally Representative Hyperspectral In Situ Dataset For Optical Sensing Of Water Quality, Moritz K. Lehmann

School of Natural Resources: Faculty Publications

The development of algorithms for remote sensing of water quality (RSWQ) requires a large amount of in situ data to account for the bio-geo-optical diversity of inland and coastal waters. The GLObal Reflectance community dataset for Imaging and optical sensing of Aquatic environments (GLORIA) includes 7,572 curated hyperspectral remote sensing reflectance measurements at 1nm intervals within the 350 to 900nm wavelength range. In addition, at least one co-located water quality measurement of chlorophyll α, total suspended solids, absorption by dissolved substances, and Secchi depth, is provided. The data were contributed by researchers affiliated with 59 institutions worldwide and come from …

The Ecology Of Human-Caused Mortality For A Protected Large Carnivore, John F. Benson, Kyle D. Dougherty, Paul Beier, Walter M. Boyce, Bogdan Cristescu, Daniel J. Gammons, David K. Garcelon, J. Mark Higley, Quinton E. Martins, Anna C. Nisi, Seth P. D. Riley, Jeff A. Sikich, Thomas R. Stephenson, T. Winston Vickers, Greta M. Wengert, Christopher C. Wilmers, Heiko U. Wittmer, Justin A. Dellinger

School of Natural Resources: Faculty Publications

Mitigating human-caused mortality for large carnivores is a pressing global challenge for wildlife conservation. However, mortality is almost exclusively studied at local (within-population) scales creating a mismatch between our understanding of risk and the spatial extent most relevant to conservation and management of wide-ranging species. Here, we quantified mortality for 590 radio-collared mountain lions statewide across their distribution in California to identify drivers of human-caused mortality and investigate whether human-caused mortality is additive or compensatory. Human-caused mortality, primarily from conflict management and vehicles, exceeded natural mortality despite mountain lions being protected from hunting. Our data indicate that human-caused mortality is …

Occupancy And Abundance Of A West African Mangabey Species (Cercocebus Atys Audebert, 1797) In Forest Patch Habitat, Kellie Laity, April Conway, Sonia M. Hernandez, John P. Carroll, Dessalegn Ejigu

School of Natural Resources: Faculty Publications

Sooty mangabeys are Old World primates from the Upper Guinea Rainforests of West Africa. They suffer from habitat degradation due to deforestation and hunting for the bush-meat trade. Tiwai Island and adjacent small islands are a small protected area surrounded by the Moa River that is known for its high diversity of primate species. We evaluated the occupancy and abundance of sooty mangabeys on Tiwai Island and the surrounding islands using camera traps during 2008–2011. Over two seasons, we obtained a naïve occupancy rate of 0.77 for Tiwai Island but only 0.19 for surrounding smaller islands. We used Abundance-Induced Heterogeneity …

Drought Stress Prediction And Propagation Using Time Series Modeling On Multimodal Plant Image Sequences, Sruti Das Choudhury, Sinjoy Saha, Ashok Samal, Anastasios Mazis, Tala Awada

School of Natural Resources: Faculty Publications

The paper introduces two novel algorithms for predicting and propagating drought stress in plants using image sequences captured by cameras in two modalities, i.e., visible light and hyperspectral. The first algorithm, VisStressPredict, computes a time series of holistic phenotypes, e.g., height, biomass, and size, by analyzing image sequences captured by a visible light camera at discrete time intervals and then adapts dynamic time warping (DTW), a technique for measuring similarity between temporal sequences for dynamic phenotypic analysis, to predict the onset of drought stress. The second algorithm, HyperStressPropagateNet, leverages a deep neural network for temporal stress propagation using hyperspectral imagery. …

Bats Increased Foraging Activity At Experimental Prey Patches Near Hibernacula, Winifred F. Frick, Yvonne A. Dzal, Kristin A. Jonasson, Michael D. Whitby, Amanda M. Adams, Christen Long, John E. Depue, Christian M. Newman, Craig K. R. Willis, Tina L. Cheng

Nebraska Cooperative Fish and Wildlife Research Unit: Staff Publications

1. Emerging infectious diseases in wildlife can threaten vulnerable host populations. Actions targeting habitat improvements to aid population resilience and recovery may be beneficial long-term strategies, yet testing the efficacy of such strategies before major conservation investments are made can be challenging.

2. The disease white-nose syndrome (WNS) has caused severe declines in several species of North American hibernating bats. We tested a novel conservation approach targeted at improving foraging conditions near bat hibernacula by experimentally manipulating insect density in the pre-hibernation fattening period and spring emergence recovery period. We measured foraging (feeding buzzes) and echolocation activity of little brown bats Myotis …

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Sexual Selection As A Tool To Improve Student Reasoning Of Evolution, Sarah K. Spier, Joseph Dauer

School of Natural Resources: Faculty Publications

There is an emphasis on survival-based selection in biology education that can allow students to neglect other important evolutionary components, such as sexual selection, reproduction, and inheritance. Student understanding of the role of reproduction in evolution is as important as student understanding of the role of survival. Limiting instruction to survival- based scenarios (e.g., effect of food on Galapagos finch beak shape) may not provide students with enough context to guide them to complete evolutionary reasoning. Different selection forces can work in concert or oppose one another, and sexual selection can lead to the selection of trait variants that are …

An Evaluation Of Avian Influenza Virus Whole-Genome Sequencing Approaches Using Nanopore Technology, Hon S. Ip, Sarah Uhm, Mary Lea Killian, Mia K. Torchetti

USDA Wildlife Services: Staff Publications

As exemplified by the global response to the SARS-CoV-2 pandemic, whole-genome sequencing played an important role in monitoring the evolution of novel viral variants and provided guidance on potential antiviral treatments. The recent rapid and extensive introduction and spread of highly pathogenic avian influenza virus in Europe, North America, and elsewhere raises the need for similarly rapid sequencing to aid in appropriate response and mitigation activities. To facilitate this objective, we investigate a next-generation sequencing platform that uses a portable nanopore sequencing device to generate and present data in real time. This platform offers the potential to extend in-house sequencing …

Development Of A Benchmark Eddy Flux Evapotranspiration Dataset For Evaluation Of Satellite-Driven Evapotranspiration Models Over The Conus, John M. Volk, Justin Huntington, Forrest S. Melton, Richard Allen, Martha C. Anderson, Joshua B. Fisher, Ayse Kilic, Gabriel Senay, Gregory Halverson, Kyla Knipper, Blake Minor, Christopher Pearson, Tianxin Wang, Yun Yang, Steven Evett, Andrew N. French, Richard Jasoni, William Kustas

School of Natural Resources: Faculty Publications

A large sample of ground-based evapotranspiration (ET) measurements made in the United States, primarily from eddy covariance systems, were post-processed to produce a benchmark ET dataset. The dataset was produced primarily to support the intercomparison and evaluation of the OpenET satellite-based remote sensing ET (RSET) models and could also be used to evaluate ET data from other models and approaches. OpenET is a web-based service that makes field-delineated and pixel-level ET estimates from well-established RSET models readily available to water managers, agricultural producers, and the public. The benchmark dataset is composed of flux and meteorological data from a variety of …

Diversity, Distribution, And Methodological Considerations Of Haemosporidian Infections Among Galliformes In Alaska, Faith De Amaral, Robert E. Wilson, Sarah A. Sonsthagen, Ravinder Sehgal

School of Natural Resources: Faculty Publications

Using samples spanning 10-degrees of latitude in Alaska, we provide the first comparative assessment of avian haemosporidia distribution of Arctic Alaska with subarctic host populations for four species of grouse and three species of ptarmigan (Galliformes). We found a high overall prevalence for at least one haemospordian genus (88%; N = 351/400), with spruce grouse (Canachites canadensis) showing the highest prevalence (100%; N = 54/ 54). Haemoproteus and Plasmodium lineages were only observed within grouse, while Leucocytozoon species were found within both grouse and ptarmigan. Further, different Leucocytozoon lineages were obtained from blood and tissue samples from the …

Time Domain Reflectometry Waveform Interpretation With Convolutional Neural Networks, Zhuangji Wang, Shan Hua, Dennis Timlin, Yuki Kojima, Songtao Lu, Wenguang Sun, David Fleisher, Robert Horton, Vangimalla R. Reddy, Katherine Tully

Nebraska Water Center: Faculty Publications

Interpreting time domain reflectometry (TDR) waveforms obtained in soils with non-uniform water content is an open question. We design a new TDR waveform interpretation model based on convolutional neural networks (CNNs) that can reveal the spatial variations of soil relative permittivity and water content along a TDR sensor. The proposed model, namely TDR-CNN, is constructed with three modules. First, the geometrical features of the TDR waveforms are extracted with a simplified version of VGG16 network. Second, the reflection positions in a TDR waveform are traced using a 1D version of the region proposal network. Finally, the soil relative permittivity values …

Burmese Pythons In Florida: A Synthesis Of Biology, Impacts, And Management Tools, Jacquelyn C. Guzy, Bryan G. Falk, Brian J. Smith, Johnd David Willson, Robert N. Reed, Nicholas G. Aumen, Michael L. Avery, Ian A. Bartoszek, Earl Campbell, Michael S. Cherkiss, Natalie M. Claunch, Andrea F. Currylow, Tylan Dean, Jeremy Dixon, Richard Engeman, Sarah Funck, Rebekah Gibble, Kodiak C. Hengstebeck, John S. Humphrey, Margaret E. Hunter, Jillian M. Josimovich, Jennifer Ketterlin, Michael Kirkland, Frank J. Mazzotti, Robert Mccleery, Melissa A. Miller, Matthew Mccollister, M. Rockwell Parker, Shannon E. Pittman, Michael Rochford, Christina Romagosa, Art Roybal, Ray W. Snow, Mckayla M. Spencer, J. Hardin Waddle, Any A. Yackel Adams, Kristen M. Hart

USDA Wildlife Services: Staff Publications

Burmese pythons (Python molurus bivittatus) are native to southeastern Asia, however, there is an established invasive population inhabiting much of southern Florida throughout the Greater Everglades Ecosystem. Pythons have severely impacted native species and ecosystems in Florida and represent one of the most intractable invasive-species management issues across the globe. The difficulty stems from a unique combination of inaccessible habitat and the cryptic and resilient nature of pythons that thrive in the subtropical environment of southern Florida, rendering them extremely challenging to detect. Here we provide a comprehensive review and synthesis of the science relevant to managing invasive …

Habitat Fragmentation Reduces Survival And Drives Source–Sink Dynamics For A Large Carnivore, Anna C. Nisi, John F. Benson, Richard King, Christopher C. Wilmers

School of Natural Resources: Faculty Publications

Rigorous understanding of how environmental conditions impact population dynamics is essential for species conservation, especially in mixed-use landscapes where source–sink dynamics may be at play. Conservation of large carnivore populations in fragmented, human-dominated landscapes is critical for their long-term persistence. However, living in human-dominated landscapes comes with myriad costs, including direct anthropogenic mortality and sublethal energetic costs. How these costs impact individual fitness and population dynamics are not fully understood, partly due to the difficulty in collecting long-term demographic data for these species. Here, we analyzed an 11-year dataset on puma (Puma concolor) space use, mortality, and reproduction …

Boundary Spanning In The Context Of Stakeholder Engagement In Collaborative Water Management, Mark E. Burbach, Weston M. Eaton, Jodi L. Delozier

School of Natural Resources: Faculty Publications

Boundary spanners are individuals able to reach across organizational borders to build relationships and interconnections to help better manage complex problems. What is not clear, however, are the skills that allow boundary spanners to cross diverse scales, sectors, and organizations. To address this gap, we use a qualitative case study approach to examine evidence for how boundary spanning skills are implemented in the context of stakeholder engagement for addressing water challenges in agricultural settings. We employ a hybrid deductive-inductive thematic analysis approach to examine interview data collected with 25 stakeholder participants as well as direct observation of engagement behavior. Interview …

Orb-Web Spider Argiope (Araneidae) As Indigenous Arrow Poison Of G/Ui And G//Ana San Hunters In The Kalahari, Tharina L. Bird, Smith Moeti, Robert K. Hitchcock, Melinda C. Kelly, Lefang L. Chobolo, Nonofo Gotcha, Kgosi K. Moatlhodi, Leungo D. Mukoka, Emmanuel K. Sekopo, Caroline Simmrita Chaboo

Publications of UNSM Staff and Affiliates

Hunting has been crucial in early human evolution. Some San (Bushmen) of southern Africa still practice their indigenous hunting. The use of poisons is one remarkable aspect of their bow-and-arrow hunting but the sources, taxonomic identifications of species used, and recipes, are not well documented. This study reports on fieldwork to investigate recent indigenous hunting practices of G/ui and G//ana San communities in the Central Kalahari Game Reserve (CKGR), Botswana. Here we discuss their use of spider poison. The hunters use the contents of the opisthosoma (‘abdomen’) of a spider as sole ingredient of the arrow poison and discard the …

Role Of Social Determinants Of Health In Differential Respiratory Exposure And Health Outcomes Among Children, Jagadeesh Puvvula, Jill A. Poole, Yeongjin Gwon, Eleanor G. Rogan, Jesse E. Bell

School of Natural Resources: Faculty Publications

Background Attributes defining the Social Determinants of Health (SDoH) are associated with disproportionate exposures to environmental hazards and differential health outcomes among communities. The dynamics between SDoH, disproportionate environmental exposures, and differential health outcomes are often specific to micro-geographic areas.

Methods This study focused on children less than 20 years of age who lived in Douglas County, Nebraska, during 2016–2019. To assess the role of SDoH in differential exposures, we evaluated the association between SDoH metrics and criteria pollutant concentrations and the association between SDoH and pediatric asthma exacerbations to quantify the role of SDoH in differential pediatric asthma outcomes. …

Panarchy Theory For Convergence, Shana M. Sundstrom, David G. Angeler, Jesse Bell, Michael J. Hayes, Jennifer Hodbod, Babak Jalalzadeh‑Fard, Rezaul Mahmood, Elizabeth Vanwormer, Craig R. Allen

School of Natural Resources: Faculty Publications

Coping with surprise and uncertainty resulting from the emergence of undesired and unexpected novelty or the sudden reorganization of systems at multiple spatiotemporal scales requires both a scientific process that can incorporate diverse expertise and viewpoints, and a scientific framework that can account for the structure and dynamics of interacting social-ecological systems (SES) and the inherent uncertainty of what might emerge in the future. We argue that combining a convergence scientific process with a panarchy framework provides a pathway for improving our understanding of, and response to, emergence. Emergent phenomena are often unexpected (e.g., pandemics, regime shifts) and can be …

Author Correction: Gloria - A Globally Representative Hyperspectral In Situ Dataset For Optical Sensing Of Water Quality, Moritz K. Lehmann, Et Al.

School of Natural Resources: Faculty Publications

Correction to: Scientific Data https://doi.org/10.1038/s41597-023-01973-y, published online 16 February 2023.

An author of the paper was omitted in the original version (Ted Conroy, University of Waikato, New Zealand). This has been corrected in the pdf and HTML versions of the paper, and the associated metadata.

The Search Behavior Of Terrestrial Mammals, M. Noonan, C. Martinez-Garcia, C. H. Fleming, A. R. Little Et. Al

School of Natural Resources: Faculty Publications

No abstract provided.

Impacts Of Algal Blooms And Microcystins In Fish On Small-Scale Fishers In Winam Gulf, Lake Victoria: Implications For Health And Livelihood, Amber F. Roegner, Jessica R. Corman, Lewis M. Sitoki, Zachary A. Kwena, Zachary Ogari, Jared Babu Miruka, Ame Xiong, Chelsea Weirich, Christopher Mulanda Aura, Todd Rex Miller

School of Natural Resources: Faculty Publications

Lake Victoria, bordered by Kenya, Tanzania, and Uganda, provides one of the largest freshwater fisheries in the world and supports millions in small-scale fishing communities. Historical environmental change, including population growth, nutrient loading, introduced invasive species, and rising temperatures, has resulted in eutrophication and persistent cyanobacterial harmful algae blooms (cyanoHABs) over recent decades, particularly in the shallower gulfs, bays, and inlets. CyanoHABs impact fisheries and food web dynamics and compromise food and water security for nearshore fisher populations. In this study, we examine the socialecological impact of freshwater blooms on fisher health in one of these eutrophic regions, Winam Gulf …

Panta Rhei Benchmark Dataset: Socio-Hydrological Data Of Paired Events Of Floods And Droughts, Heidi Kreibich, Elliot Wickham, Et Al.

School of Natural Resources: Faculty Publications

As the adverse impacts of hydrological extremes increase in many regions of the world, a better understanding of the drivers of changes in risk and impacts is essential for effective flood and drought risk management and climate adaptation. However, there is currently a lack of comprehensive, empirical data about the processes, interactions, and feedbacks in complex human–water systems leading to flood and drought impacts. Here we present a benchmark dataset containing socio-hydrological data of paired events, i.e. two floods or two droughts that occurred in the same area. The 45 paired events occurred in 42 different study areas and cover …

Taps Program Evaluation – Producers, Stephanie M. Kennedy, Mark E. Burbach

School of Natural Resources: Faculty Publications

No abstract provided.

Taps Program Evaluation – Non-Producers, Stephanie M. Kennedy, Mark E. Burbach

School of Natural Resources: Faculty Publications

No abstract provided.

Revisiting The Carbon–Biodiversity Connection, John Gamon

School of Natural Resources: Faculty Publications

This article is a Commentary on Schuldt et al., https://doi.org/10.1111/gcb.16697

The link between biodiversity and ecosystem function has long been a subject of intense interest and debate among biologists, going back to the time of Charles Darwin, whose ideas on species interactions presaged subsequent discussions of biodiversity and ecosystem function (Peterson et al., 1998). Since then, many considerations of community diversity have centered on the importance of species or functional diversity for maintaining system resilience in the face of disturbance, analogous to the way that interwoven threads maintain the function and integrity of fabric. While our language, concepts, and methods …

Drought Affects Sex Ratio And Growth Of Painted Turtles In A Long-Term Study In Nebraska, Larkin Powell, Ellen Dolph, Charrissa R. Neil

School of Natural Resources: Faculty Publications

Climate forecasts suggest the Great Plains of North America have increased risk of droughts during global warming. Environmental factors have potential to influence turtle populations in aquatic habitats through temperature-dependent sex determination and influences on food availability. Long-term studies are critical to evaluate the influence of climatic variation on turtles. We used a 12-year set of mark-recapture data collected from painted turtles (Chrysemys picta, n = 162) in a pond in Keith County, Nebraska during 2005–2016 to assess variation in sex ratio and growth dynamics. Southwest Nebraska experienced two periods of drought during our study (Palmer Hydrologic Drought Index [PHDI] …