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Articles 31 - 60 of 714

Full-Text Articles in Medical Sciences

Pitch Discrimination Is Better For Synthetic Timbre Than Natural Musical Instrument Timbres, Despite Familiarity, Emma Holmes, Elizabeth Kinghorn, Lucy Mcgarry, Elizabeth Busari, Timothy D. Griffiths, Ingrid Johnsrude Oct 2021

Pitch Discrimination Is Better For Synthetic Timbre Than Natural Musical Instrument Timbres, Despite Familiarity, Emma Holmes, Elizabeth Kinghorn, Lucy Mcgarry, Elizabeth Busari, Timothy D. Griffiths, Ingrid Johnsrude

Brain and Mind Institute Researchers' Publications

Pitch discrimination is better for complex tones than for pure tones, but how more subtle differences in timbre affect pitch discrimination is not fully understood. This study compared pitch discrimination thresholds of flat-spectrum harmonic complex tones with those of natural sounds played by musical instruments of three different timbres (violin, trumpet, and flute). To investigate whether natural familiarity with sounds of particular timbres affects pitch discrimination thresholds, this study recruited musicians who were trained on one of the three instruments. We found that flautists and trumpeters could discriminate smaller differences in pitch for artificial flat-spectrum tones, despite their unfamiliar timbre, …

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Functional Organization Of Frontoparietal Cortex In The Marmoset Investigated With Awake Resting-State Fmri, Yuki Hori, Justine C. Cléry, David J. Schaeffer, Ravi S. Menon, Stefan Everling Sep 2021

Functional Organization Of Frontoparietal Cortex In The Marmoset Investigated With Awake Resting-State Fmri, Yuki Hori, Justine C. Cléry, David J. Schaeffer, Ravi S. Menon, Stefan Everling

Brain and Mind Institute Researchers' Publications

Frontoparietal networks contribute to complex cognitive functions in humans and macaques, such as working memory, attention, task-switching, response suppression, grasping, reaching, and eye movement control. However, there has been no comprehensive examination of the functional organization of frontoparietal networks using functional magnetic resonance imaging in the New World common marmoset monkey (Callithrix jacchus), which is now widely recognized as a powerful nonhuman primate experimental animal. In this study, we employed hierarchical clustering of interareal blood oxygen level-dependent signals to investigate the hypothesis that the organization of the frontoparietal cortex in the marmoset follows the organizational principles of the macaque frontoparietal …

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Sustained Neural Activity Correlates With Rapid Perceptual Learning Of Auditory Patterns, Björn Herrmann, Kurdo Araz, Ingrid S. Johnsrude Sep 2021

Sustained Neural Activity Correlates With Rapid Perceptual Learning Of Auditory Patterns, Björn Herrmann, Kurdo Araz, Ingrid S. Johnsrude

Brain and Mind Institute Researchers' Publications

Repeating structures forming regular patterns are common in sounds. Learning such patterns may enable accurate perceptual organization. In five experiments, we investigated the behavioral and neural signatures of rapid perceptual learning of regular sound patterns. We show that recurring (compared to novel) patterns are detected more quickly and increase sensitivity to pattern deviations and to the temporal order of pattern onset relative to a visual stimulus. Sustained neural activity reflected perceptual learning in two ways. Firstly, sustained activity increased earlier for recurring than novel patterns when participants attended to sounds, but not when they ignored them; this earlier increase mirrored …

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Nnresting State Fmri Scanner Instabilities Revealed By Longitud Inal Phantom Scans In A Multi-Center Study, Aras Kayvanrad, Stephen R. Arnott, Nathan Churchill, Stefanie Hassel, Aditi Chemparathy, Fan Dong, Mojdeh Zamyadi, Tom Gee, Robert Bartha, Sandra E. Black, Jane M. Lawrence-Dewar, Christopher J.M. Scott, Sean Symons, Andrew D. Davis, Geoffrey B. Hall, Jacqueline Harris, Nancy J. Lobaugh, Glenda Macqueen, Cindy Woo, Stephen Strother Aug 2021

Nnresting State Fmri Scanner Instabilities Revealed By Longitud Inal Phantom Scans In A Multi-Center Study, Aras Kayvanrad, Stephen R. Arnott, Nathan Churchill, Stefanie Hassel, Aditi Chemparathy, Fan Dong, Mojdeh Zamyadi, Tom Gee, Robert Bartha, Sandra E. Black, Jane M. Lawrence-Dewar, Christopher J.M. Scott, Sean Symons, Andrew D. Davis, Geoffrey B. Hall, Jacqueline Harris, Nancy J. Lobaugh, Glenda Macqueen, Cindy Woo, Stephen Strother

Medical Biophysics Publications

Quality assurance (QA) is crucial in longitudinal and/or multi-site studies, which involve the collection of data from a group of subjects over time and/or at different locations. It is important to regularly monitor the performance of the scanners over time and at different locations to detect and control for intrinsic differences (e.g., due to manufacturers) and changes in scanner performance (e.g., due to gradual component aging, software and/or hardware upgrades, etc.). As part of the Ontario Neurodegenerative Disease Research Initiative (ONDRI) and the Canadian Biomarker Integration Network in Depression (CAN-BIND), QA phantom scans were conducted approximately monthly for three to …

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Rapid Microscopic Fractional Anisotropy Imaging Via An Optimized Linear Regression Formulation., N J J Arezza, D H Y Tse, C A Baron Jul 2021

Rapid Microscopic Fractional Anisotropy Imaging Via An Optimized Linear Regression Formulation., N J J Arezza, D H Y Tse, C A Baron

Medical Biophysics Publications

Water diffusion anisotropy in the human brain is affected by disease, trauma, and development. Microscopic fractional anisotropy (μFA) is a diffusion MRI (dMRI) metric that can quantify water diffusion anisotropy independent of neuron fiber orientation dispersion. However, there are several different techniques to estimate μFA and few have demonstrated full brain imaging capabilities within clinically viable scan times and resolutions. Here, we present an optimized spherical tensor encoding (STE) technique to acquire μFA directly from the 2nd order cumulant expansion of the powder averaged dMRI signal obtained from direct linear regression (i.e. diffusion kurtosis) which requires fewer powder-averaged signals than …

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A Novel Three-Choice Touchscreen Task To Examine Spatial Attention And Orienting Responses In Rodents, Faraj L. Haddad, Maryam Ghahremani, Cleusa De Oliveira, Ella E. Doornaert, Kevin D. Johnston, Stefan Everling, Susanne Schmid Jul 2021

A Novel Three-Choice Touchscreen Task To Examine Spatial Attention And Orienting Responses In Rodents, Faraj L. Haddad, Maryam Ghahremani, Cleusa De Oliveira, Ella E. Doornaert, Kevin D. Johnston, Stefan Everling, Susanne Schmid

Brain and Mind Institute Researchers' Publications

Mammalian orienting behavior consists of coordinated movements of the eyes, head, pinnae, vibrissae, or body to attend to an external stimulus. The present study aimed to develop a novel operant task using a touch-screen system to measure spatial attention. In this task, rats were trained to nose-poke a light stimulus presented in one of three locations. The stimulus was presented more frequently in the center location to develop spatial attention bias toward the center stimulus. Changes in orienting responses were detected by measuring the animals’ response accuracy and latency to stimuli at the lateral locations, following reversible unilateral chemogenetic inactivation …

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Critically Ill Covid-19 Patients Exhibit Anti-Sars-Cov-2 Serological Responses, Mark Daley, Douglas D. Fraser, Gediminas Cepinskas, Marat Slessarev, Claudio M. Martin, Maitray A. Patel, Michael Miller, Eric K. Patterson, David B. O’Gorman, Sean E. Gill, Ian Higgins, Julius P. John, Christopher Melo, Lylia Nini, Xiaoqin Wang, Johannes Zeidler, Jorge A. Cruz-Aguado May 2021

Critically Ill Covid-19 Patients Exhibit Anti-Sars-Cov-2 Serological Responses, Mark Daley, Douglas D. Fraser, Gediminas Cepinskas, Marat Slessarev, Claudio M. Martin, Maitray A. Patel, Michael Miller, Eric K. Patterson, David B. O’Gorman, Sean E. Gill, Ian Higgins, Julius P. John, Christopher Melo, Lylia Nini, Xiaoqin Wang, Johannes Zeidler, Jorge A. Cruz-Aguado

Physiology and Pharmacology Publications

Coronavirus disease 2019 (COVID-19), caused by SARS-CoV-2, is a global health care emergency. Anti-SARS-CoV-2 serological profiling of critically ill COVID-19 patients was performed to determine their humoral response. Blood was collected from critically ill ICU patients, either COVID-19 positive (+) or COVID-19 negative (−), to measure anti-SARS-CoV-2 immunoglobulins: IgM; IgA; IgG; and Total Ig (combined IgM/IgA/IgG). Cohorts were similar, with the exception that COVID-19+ patients had a greater body mass indexes, developed bilateral pneumonias more frequently and suffered increased hypoxia when compared to COVID-19-patients (p < 0.05). The mortality rate for COVID-19+ patients was 50%. COVID-19 status could be determined by anti-SARS-CoV-2 serological responses with excellent classification accuracies on ICU day 1 (89%); ICU day 3 (96%); and ICU days 7 and 10 (100%). The importance of each Ig isotype for determining COVID-19 status on combined ICU days 1 and 3 was: Total Ig, 43%; IgM, 27%; IgA, 24% and IgG, 6%. Peak serological responses for each Ig isotype occurred on different ICU days (IgM day 13 > IgA day 17 > IgG persistently increased), with the Total Ig peaking at approximately ICU day …

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Structural Alterations In Cortical And Thalamocortical White Matter Tracts After Recovery From Prefrontal Cortex Lesions In Macaques, Ramina Adam, David J. Schaeffer, Kevin Johnston, Ravi S. Menon, Stefan Everling May 2021

Structural Alterations In Cortical And Thalamocortical White Matter Tracts After Recovery From Prefrontal Cortex Lesions In Macaques, Ramina Adam, David J. Schaeffer, Kevin Johnston, Ravi S. Menon, Stefan Everling

Brain and Mind Institute Researchers' Publications

Unilateral damage to the frontoparietal network typically impairs saccade target selection within the contralesional visual hemifield. Severity of deficits and the degree of recovery have been associated with widespread network dysfunction, yet it is not clear how these behavioural and functional brain changes relate with the underlying structural white matter tracts. Here, we investigated whether recovery after unilateral prefrontal cortex (PFC) lesions was associated with changes in white matter microstructure across large-scale frontoparietal cortical and thalamocortical networks. Diffusion-weighted imaging was acquired in four male rhesus macaques at pre-lesion, week 1, and week 8-16 post-lesion when target selection deficits largely recovered. …

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Integrating Numerical Cognition Research And Mathematics Education To Strengthen The Teaching And Learning Of Early Number, Zachary Hawes, Rebecca Merkley, Christine L. Stager, Daniel Ansari May 2021

Integrating Numerical Cognition Research And Mathematics Education To Strengthen The Teaching And Learning Of Early Number, Zachary Hawes, Rebecca Merkley, Christine L. Stager, Daniel Ansari

Brain and Mind Institute Researchers' Publications

BACKGROUND: Research into numerical cognition has contributed to a large body of knowledge on how children learn and perform mathematics. This knowledge has the potential to inform mathematics education. Unfortunately, numerical cognition research and mathematics education remain disconnected from one another, lacking the proper infrastructure to allow for productive and meaningful exchange between disciplines. The present study was designed to address this gap. AIM: This study reports on the design, implementation, and effects of a 16-week (25-hour) mathematics Professional Development (PD) model for Kindergarten to Grade 3 educators and their students. A central goal of the PD was to better …

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Muting, Not Fragmentation, Of Functional Brain Networks Under General Anesthesia, Corson N. Areshenkoff, Joseph Y. Nashed, R. Matthew Hutchison, Melina Hutchison, Ron Levy, Douglas J. Cook, Ravi S. Menon, Stefan Everling, Jason P. Gallivan May 2021

Muting, Not Fragmentation, Of Functional Brain Networks Under General Anesthesia, Corson N. Areshenkoff, Joseph Y. Nashed, R. Matthew Hutchison, Melina Hutchison, Ron Levy, Douglas J. Cook, Ravi S. Menon, Stefan Everling, Jason P. Gallivan

Brain and Mind Institute Researchers' Publications

© 2021 Changes in resting-state functional connectivity (rs-FC) under general anesthesia have been widely studied with the goal of identifying neural signatures of consciousness. This work has commonly revealed an apparent fragmentation of whole-brain network structure during unconsciousness, which has been interpreted as reflecting a break-down in connectivity and a disruption of the brain's ability to integrate information. Here we show, by studying rs-FC under varying depths of isoflurane-induced anesthesia in nonhuman primates, that this apparent fragmentation, rather than reflecting an actual change in network structure, can be simply explained as the result of a global reduction in FC. Specifically, …

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Shared Neural Circuits For Visuospatial Working Memory And Arithmetic In Children And Adults, Anna A. Matejko, Daniel Ansari May 2021

Shared Neural Circuits For Visuospatial Working Memory And Arithmetic In Children And Adults, Anna A. Matejko, Daniel Ansari

Brain and Mind Institute Researchers' Publications

Visuospatial working memory (VSWM) plays an important role in arithmetic problem solving, and the relationship between these two skills is thought to change over development. Even though neuroimaging studies have demonstrated that VSWM and arithmetic both recruit frontoparietal networks, inferences about common neural substrates have largely been made by comparisons across studies. Little work has examined how brain activation for VSWM and arithmetic converge within the same participants and whether there are age-related changes in the overlap of these neural networks. In this study, we examined how brain activity for VSWM and arithmetic overlap in 38 children and 26 adults. …

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Skin And Muscle Receptors Shape Coordinated Fast Feedback Responses In The Upper Limb, Christopher J. Forgaard, Sasha Reschechtko, Paul L. Gribble, J. Andrew Pruszynski Apr 2021

Skin And Muscle Receptors Shape Coordinated Fast Feedback Responses In The Upper Limb, Christopher J. Forgaard, Sasha Reschechtko, Paul L. Gribble, J. Andrew Pruszynski

Brain and Mind Institute Researchers' Publications

© 2021 Elsevier Ltd Despite many real-world examples where skin and muscle receptors must function in concert to support movement control, responses based on these sensory modalities are usually separated from one another in laboratory studies. Proprioception is often considered the domain of muscle receptors, whereas the skin's function is often assumed to be discriminative touch. This distinction understates the extent to which sensory feedback from skin and muscle work together to shape successful movement control. Here we review the functional characteristics and similarities between fast feedback responses of the upper limb originating from muscle stretch and skin slip. We …

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Kindergarteners' Symbolic Number Abilities Predict Nonsymbolic Number Abilities And Math Achievement In Grade 1, Nathan T. Lau, Rebecca Merkley, Paul Tremblay, Samuel Zhang, Stefanie De Jesus, Daniel Ansari Apr 2021

Kindergarteners' Symbolic Number Abilities Predict Nonsymbolic Number Abilities And Math Achievement In Grade 1, Nathan T. Lau, Rebecca Merkley, Paul Tremblay, Samuel Zhang, Stefanie De Jesus, Daniel Ansari

Brain and Mind Institute Researchers' Publications

Research has shown that two different, though related, ways of representing magnitude play foundational roles in the development of numerical and mathematical skills: a nonverbal approximate number system and an exact symbolic number system. While there have been numerous studies suggesting that the two systems are important predictors of math achievement, there has been substantial debate regarding whether and how these basic numerical competencies may be developmentally interrelated. Specifically, the causal direction of their relation has been the subject of debate: whether children's approximate number abilities predict later symbolic number abilities (the mapping account) or the other way around (the …

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Multisite Comparison Of Mri Defacing Software Across Multiple Cohorts, Athena E. Theyers, Mojdeh Zamyadi, Mark O'Reilly, Robert Bartha, Sean Symons, Glenda M. Macqueen, Stefanie Hassel, Jason P. Lerch, Evdokia Anagnostou, Raymond W. Lam, Benicio N. Frey, Roumen Milev, Daniel J. Müller, Sidney H. Kennedy, Christopher J.M. Scott, Stephen C. Strother, Stephen R. Arnott Feb 2021

Multisite Comparison Of Mri Defacing Software Across Multiple Cohorts, Athena E. Theyers, Mojdeh Zamyadi, Mark O'Reilly, Robert Bartha, Sean Symons, Glenda M. Macqueen, Stefanie Hassel, Jason P. Lerch, Evdokia Anagnostou, Raymond W. Lam, Benicio N. Frey, Roumen Milev, Daniel J. Müller, Sidney H. Kennedy, Christopher J.M. Scott, Stephen C. Strother, Stephen R. Arnott

Medical Biophysics Publications

With improvements to both scan quality and facial recognition software, there is an increased risk of participants being identified by a 3D render of their structural neuroimaging scans, even when all other personal information has been removed. To prevent this, facial features should be removed before data are shared or openly released, but while there are several publicly available software algorithms to do this, there has been no comprehensive review of their accuracy within the general population. To address this, we tested multiple algorithms on 300 scans from three neuroscience research projects, funded in part by the Ontario Brain Institute, …

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Intrinsic Functional Clustering Of Ventral Premotor F5 In The Macaque Brain, Saloni Sharma, David J. Schaeffer, Kasper Vinken, Stefan Everling, Koen Nelissen Feb 2021

Intrinsic Functional Clustering Of Ventral Premotor F5 In The Macaque Brain, Saloni Sharma, David J. Schaeffer, Kasper Vinken, Stefan Everling, Koen Nelissen

Brain and Mind Institute Researchers' Publications

© 2020 Neurophysiological and anatomical data suggest the existence of several functionally distinct regions in the lower arcuate sulcus and adjacent postarcuate convexity of the macaque monkey. Ventral premotor F5c lies on the postarcuate convexity and consists of a dorsal hand-related and ventral mouth-related field. The posterior bank of the lower arcuate contains two additional premotor F5 subfields at different anterior-posterior levels, F5a and F5p. Anterior to F5a, area 44 has been described as a dysgranular zone occupying the deepest part of the fundus of the inferior arcuate. Finally, area GrFO occupies the most rostral portion of the fundus and …

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Effects Of Phase Regression On High-Resolution Functional Mri Of The Primary Visual Cortex, Olivia W. Stanley, Alan B. Kuurstra, L. Martyn Klassen, Ravi S. Menon, Joseph S. Gati Feb 2021

Effects Of Phase Regression On High-Resolution Functional Mri Of The Primary Visual Cortex, Olivia W. Stanley, Alan B. Kuurstra, L. Martyn Klassen, Ravi S. Menon, Joseph S. Gati

Brain and Mind Institute Researchers' Publications

High-resolution functional MRI studies have become a powerful tool to non-invasively probe the sub-millimeter functional organization of the human cortex. Advances in MR hardware, imaging techniques and sophisticated post-processing methods have allowed high resolution fMRI to be used in both the clinical and academic neurosciences. However, consensus within the community regarding the use of gradient echo (GE) or spin echo (SE) based acquisition remains largely divided. On one hand, GE provides a high temporal signal-to-noise ratio (tSNR) technique sensitive to both the macro- and micro-vascular signal while SE based methods are more specific to microvasculature but suffer from lower tSNR …

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The Role Of Panx3 In Age-Associated And Injury-Induced Intervertebral Disc Degeneration, Meaghan Serjeant, Paxton M. Moon, Diana Quinonez, Silvia Penuela, Frank Beier, Cheryle A. Séguin Feb 2021

The Role Of Panx3 In Age-Associated And Injury-Induced Intervertebral Disc Degeneration, Meaghan Serjeant, Paxton M. Moon, Diana Quinonez, Silvia Penuela, Frank Beier, Cheryle A. Séguin

Physiology and Pharmacology Publications

© 2021 by the authors. Licensee MDPI, Basel, Switzerland. Pannexin 3 (Panx3) is a mechanosensitive, channel-forming glycoprotein implicated in the progression of post-traumatic osteoarthritis. Despite evidence for Panx3 expression in the intervertebral disc (IVD), its function in this cartilaginous joint structure remained unknown. Using Panx3 knockout mice, this study investigated the role of Panx3 in age-associated IVD degeneration and degeneration induced by annulus fibrosus (AF) needle puncture. Loss of Panx3 did not significantly impact the progression of age-associated histopathological IVD degeneration; however, loss of Panx3 was associated with decreased gene expression of Acan, Col1a1, Mmp13 and Runx2 and altered localization …

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Schrödinger Filtering: A Precise Eeg Despiking Technique For Eeg-Fmri Gradient Artifact, Gabriel B. Benigno, Ravi S. Menon, Hacene Serrai Feb 2021

Schrödinger Filtering: A Precise Eeg Despiking Technique For Eeg-Fmri Gradient Artifact, Gabriel B. Benigno, Ravi S. Menon, Hacene Serrai

Brain and Mind Institute Researchers' Publications

In EEG data acquired in the presence of fMRI, gradient-related spike artifacts contaminate the signal following the common preprocessing step of average artifact subtraction. Spike artifacts compromise EEG data quality since they overlap with the EEG signal in frequency, thereby confounding frequency-based inferences on activity. As well, spike artifacts can inflate or deflate correlations among time series, thereby confounding inferences on functional connectivity. We present Schrödinger filtering, which uses the Schrödinger equation to decompose the spike-containing input. The basis functions of the decomposition are localized and pulse-shaped, and selectively capture the various input peaks, with the spike components clustered at …

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Cracking The Code Of Place Value: The Relationship Between Place And Value Takes Years To Master, Pierina Cheung, Daniel Ansari Feb 2021

Cracking The Code Of Place Value: The Relationship Between Place And Value Takes Years To Master, Pierina Cheung, Daniel Ansari

Brain and Mind Institute Researchers' Publications

Place value, which underlies the meanings of multidigits, encompasses the principle of position and base-10 rules. To understand 65, one needs to know that the digits 6 and 5 occupy different positions and thus represent ordered values of different magnitudes (i.e., the principle of position) and that the value of each position is determined by base-10 rules (i.e., the rightmost position is 100, followed by 101, 102, etc.). Without the principle of position, children cannot construct meanings for multidigits. Previous studies have shown that children do not know the exact value of digit positions until the early elementary school years, …

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L-Theanine Prevents Long-Term Affective And Cognitive Side Effects Of Adolescent Δ-9-Tetrahydrocannabinol Exposure And Blocks Associated Molecular And Neuronal Abnormalities In The Mesocorticolimbic Circuitry, Marta De Felice, Justine Renard, Roger Hudson, Hanna J. Szkudlarek, Brian J. Pereira, Susanne Schmid, Walter J. Rushlow, Steven R. Laviolette Jan 2021

L-Theanine Prevents Long-Term Affective And Cognitive Side Effects Of Adolescent Δ-9-Tetrahydrocannabinol Exposure And Blocks Associated Molecular And Neuronal Abnormalities In The Mesocorticolimbic Circuitry, Marta De Felice, Justine Renard, Roger Hudson, Hanna J. Szkudlarek, Brian J. Pereira, Susanne Schmid, Walter J. Rushlow, Steven R. Laviolette

Brain and Mind Institute Researchers' Publications

Chronic adolescent exposure to Δ-9-tetrahydrocannabinol (THC) is linked to elevated neuropsychiatric risk and induces neuronal, molecular and behavioral abnormalities resembling neuropsychiatric endophenotypes. Previous evidence has revealed that the mesocorticolimbic circuitry, including the prefrontal cortex (PFC) and mesolimbic dopamine (DA) pathway are particularly susceptible to THC-induced pathologic alterations, including dysregulation of DAergic activity states, loss of PFC GABAergic inhibitory control and affective and cognitive abnormalities. There are currently limited pharmacological intervention strategies capable of preventing THC-induced neuropathological adaptations. L-Theanine is an amino acid analog of L-glutamate and L-glutamine derived from various plant sources, including green tea leaves. L-Theanine has previously been …

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The Multiplicity Of Caregiving Burden: A Qualitative Analysis Of Families With Prolonged Disorders Of Consciousness., Laura E Gonzalez-Lara, Sarah Munce, Jennifer Christian, Adrian M Owen, Charles Weijer, Fiona Webster Jan 2021

The Multiplicity Of Caregiving Burden: A Qualitative Analysis Of Families With Prolonged Disorders Of Consciousness., Laura E Gonzalez-Lara, Sarah Munce, Jennifer Christian, Adrian M Owen, Charles Weijer, Fiona Webster

Brain and Mind Institute Researchers' Publications

Objective: To understand the multiple and sometimes conflicting roles substitute decision makers (SDMs) of individuals in a vegetative state (VS), minimally conscious state (MCS), or with locked-in syndrome (LIS) perform while caring for a loved one and the competing priorities derived from these roles.Methods: We conducted semi-structured qualitative interviews using a constructive-grounded theory design. Twelve SDMs, who were also family members for 11 patients, were interviewed at two time points (except one) for a total of 21 in-depth interviews.Results: Participants described that caregiving is often the central role which they identify as their top priority …

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Sharing Voxelwise Neuroimaging Results From Rhesus Monkeys And Other Species With Neurovault, Andrew S. Fox, Daniel Holley, Peter Christiaan Klink, Spencer A. Arbuckle, Carol A. Barnes, Jörn Diedrichsen, Sze Chai Kwok, Colin Kyle, J. Andrew Pruszynski, Jakob Seidlitz, Xu Feng Zhou, Russell A. Poldrack, Krzysztof J. Gorgolewski Jan 2021

Sharing Voxelwise Neuroimaging Results From Rhesus Monkeys And Other Species With Neurovault, Andrew S. Fox, Daniel Holley, Peter Christiaan Klink, Spencer A. Arbuckle, Carol A. Barnes, Jörn Diedrichsen, Sze Chai Kwok, Colin Kyle, J. Andrew Pruszynski, Jakob Seidlitz, Xu Feng Zhou, Russell A. Poldrack, Krzysztof J. Gorgolewski

Brain and Mind Institute Researchers' Publications

© 2020 The Authors Animal neuroimaging studies can provide unique insights into brain structure and function, and can be leveraged to bridge the gap between animal and human neuroscience. In part, this power comes from the ability to combine mechanistic interventions with brain-wide neuroimaging. Due to their phylogenetic proximity to humans, nonhuman primate neuroimaging holds particular promise. Because nonhuman primate neuroimaging studies are often underpowered, there is a great need to share data amongst translational researchers. Data sharing efforts have been limited, however, by the lack of standardized tools and repositories through which nonhuman neuroimaging data can easily be archived …

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Kinetic Analysis Of Dominant Intraprostatic Lesion Of Prostate Cancer Using Quantitative Dynamic [18F]Dcfpyl-Pet: Comparison To [18F]Fluorocholine-Pet, Dae Myoung Yang, Fiona Li, Glenn Bauman, Joseph Chin, Stephen Pautler, Madeleine Moussa, Irina Rachinsky, John Valliant, Ting Yim Lee Jan 2021

Kinetic Analysis Of Dominant Intraprostatic Lesion Of Prostate Cancer Using Quantitative Dynamic [18F]Dcfpyl-Pet: Comparison To [18F]Fluorocholine-Pet, Dae Myoung Yang, Fiona Li, Glenn Bauman, Joseph Chin, Stephen Pautler, Madeleine Moussa, Irina Rachinsky, John Valliant, Ting Yim Lee

Medical Biophysics Publications

Purpose: Identification of the dominant intraprostatic lesion(s) (DILs) can facilitate diagnosis and treatment by targeting biologically significant intra-prostatic foci. A PSMA ligand, [ F]DCFPyL (2-(3-{1-carboxy-5-[(6-[ F]fluoro-pyridine-3-carbonyl)-amino]-pentyl}-ureido)-pentanedioic acid), is better than choline-based [ F]FCH (fluorocholine) in detecting and localizing DIL because of higher tumour contrast, particularly when imaging is delayed to 1 h post-injection. The goal of this study was to investigate whether the different imaging performance of [ F]FCH and [ F]DCFPyL can be explained by their kinetic behaviour in prostate cancer (PCa) and to evaluate whether DIL can be accurately detected and localized using a short duration dynamic positron …

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Utilization Of Salvage And Systemic Therapies For Recurrent Prostate Cancer As A Result Of 18F-Dcfpyl Pet/Ct Restaging, Wei Liu, Katherine Zukotynski, Louise Emmett, Hans T. Chung, Peter Chung, Robert Wolfson, Irina Rachinsky, Anil Kapoor, Ur Metser, Andrew Loblaw, Gerard Morton, Tracy Sexton, Michael Lock, Joelle Helou, Alejandro Berlin, Colm Boylan, Susan Archer, Gregory R. Pond, Glenn Bauman Jan 2021

Utilization Of Salvage And Systemic Therapies For Recurrent Prostate Cancer As A Result Of 18F-Dcfpyl Pet/Ct Restaging, Wei Liu, Katherine Zukotynski, Louise Emmett, Hans T. Chung, Peter Chung, Robert Wolfson, Irina Rachinsky, Anil Kapoor, Ur Metser, Andrew Loblaw, Gerard Morton, Tracy Sexton, Michael Lock, Joelle Helou, Alejandro Berlin, Colm Boylan, Susan Archer, Gregory R. Pond, Glenn Bauman

Medical Biophysics Publications

Purpose: Our purpose was to investigate the effect of the addition of prostate-specific membrane antigen (PSMA)-targeted positron emission tomography/computed tomography (PET/CT) in patients with recurrent prostate cancer post-primary radiation therapy. Methods and Materials: A prospective, multi-institutional clinical trial evaluated 2-(3-{1-carboxy-5-[(6-[18F]fluoro-pyridine-3-carbonyl)-amino]-pentyl}-ureido)-pentanedioic acid ( F-DCFPyL) PET/CT restaging in 79 men with recurrent prostate cancer post-primary radiation therapy. We report actual patient management and compare this with proposed management both before and after PSMA-targeted PET/CT. Results: Most patients (59%) had a major change in actual management compared with pre-PET/CT proposed management. The rate of major change was underestimated by immediately post-PET/CT surveys (32%). …

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Disease-Related Cortical Thinning In Presymptomatic Granulin Mutation Carriers, Sergi Borrego-Écija, Roser Sala-Llonch, John Van Swieten, Barbara Borroni, Fermín Moreno, Mario Masellis, Carmela Tartaglia, Caroline Graff, Daniela Galimberti, Robert Laforce, James B. Rowe, Elizabeth Finger, Rik Vandenberghe, Fabrizio Tagliavini, Alexandre De Mendonça, Isabel Santana, Matthis Synofzik, Simon Ducharme, Johannes Levin, Adrian Danek, Alex Gerhard, Markus Otto, Chris Butler, Giovanni Frisoni, Sandro Sorbi, Carolin Heller, Martina Bocchetta, David M. Cash, Rhian S. Convery, Katrina M. Moore, Jonathan D. Rohrer, Raquel Sanchez-Valle Jan 2021

Disease-Related Cortical Thinning In Presymptomatic Granulin Mutation Carriers, Sergi Borrego-Écija, Roser Sala-Llonch, John Van Swieten, Barbara Borroni, Fermín Moreno, Mario Masellis, Carmela Tartaglia, Caroline Graff, Daniela Galimberti, Robert Laforce, James B. Rowe, Elizabeth Finger, Rik Vandenberghe, Fabrizio Tagliavini, Alexandre De Mendonça, Isabel Santana, Matthis Synofzik, Simon Ducharme, Johannes Levin, Adrian Danek, Alex Gerhard, Markus Otto, Chris Butler, Giovanni Frisoni, Sandro Sorbi, Carolin Heller, Martina Bocchetta, David M. Cash, Rhian S. Convery, Katrina M. Moore, Jonathan D. Rohrer, Raquel Sanchez-Valle

Medical Biophysics Publications

Mutations in the granulin gene (GRN) cause familial frontotemporal dementia. Understanding the structural brain changes in presymptomatic GRN carriers would enforce the use of neuroimaging biomarkers for early diagnosis and monitoring. We studied 100 presymptomatic GRN mutation carriers and 94 noncarriers from the Genetic Frontotemporal dementia initiative (GENFI), with MRI structural images. We analyzed 3T MRI structural images using the FreeSurfer pipeline to calculate the whole brain cortical thickness (CTh) for each subject. We also perform a vertex-wise general linear model to assess differences between groups in the relationship between CTh and diverse covariables as gender, age, the estimated years …

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New Frontiers In Translational Research: Touchscreens, Open Science, And The Mouse Translational Research Accelerator Platform, Jacqueline A. Sullivan, Julie R. Dumont, Sara Memar, Miguel Skirzewski, Jinxia Wan, Maryam H. Mofrad, Hassam Zafar Ansari, Yulong Li, Lyle Muller, Vania F. Prado, Marco A.M. Prado, Lisa M. Saksida, Timothy J. Bussey Jan 2021

New Frontiers In Translational Research: Touchscreens, Open Science, And The Mouse Translational Research Accelerator Platform, Jacqueline A. Sullivan, Julie R. Dumont, Sara Memar, Miguel Skirzewski, Jinxia Wan, Maryam H. Mofrad, Hassam Zafar Ansari, Yulong Li, Lyle Muller, Vania F. Prado, Marco A.M. Prado, Lisa M. Saksida, Timothy J. Bussey

Brain and Mind Institute Researchers' Publications

© 2020 International Behavioural and Neural Genetics Society and John Wiley & Sons Ltd Many neurodegenerative and neuropsychiatric diseases and other brain disorders are accompanied by impairments in high-level cognitive functions including memory, attention, motivation, and decision-making. Despite several decades of extensive research, neuroscience is little closer to discovering new treatments. Key impediments include the absence of validated and robust cognitive assessment tools for facilitating translation from animal models to humans. In this review, we describe a state-of-the-art platform poised to overcome these impediments and improve the success of translational research, the Mouse Translational Research Accelerator Platform (MouseTRAP), which is …

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Effects Of Mp2rage B1+ Sensitivity On Inter-Site T1 Reproducibility And Hippocampal Morphometry At 7t, Roy A.M. Haast, Jonathan C. Lau, Dimo Ivanov, Ravi S. Menon, Kâmil Uludağ, Ali R. Khan Jan 2021

Effects Of Mp2rage B1+ Sensitivity On Inter-Site T1 Reproducibility And Hippocampal Morphometry At 7t, Roy A.M. Haast, Jonathan C. Lau, Dimo Ivanov, Ravi S. Menon, Kâmil Uludağ, Ali R. Khan

Brain and Mind Institute Researchers' Publications

Most neuroanatomical studies are based on T -weighted MR images, whose intensity profiles are not solely determined by the tissue's longitudinal relaxation times (T ), but also affected by varying non-T contributions, hampering data reproducibility. In contrast, quantitative imaging using the MP2RAGE sequence, for example, allows direct characterization of the brain based on the tissue property of interest. Combined with 7 Tesla (7T) MRI, this offers unique opportunities to obtain robust high-resolution brain data characterized by a high reproducibility, sensitivity and specificity. However, specific MP2RAGE parameter choices – e.g., to emphasize intracortical myelin-dependent contrast variations – can substantially impact image …

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Normative Analysis Of Individual Brain Differences Based On A Population Mri-Based Atlas Of Cynomolgus Macaques, Qiming Lv, Mingchao Yan, Xiangyu Shen, Jing Wu, Wenwen Yu, Shengyao Yan, Feng Yang, Kristina Zeljic, Yuequan Shi, Zuofu Zhou, Longbao Lv, Xintian Hu, Ravi Menon, Zheng Wang Jan 2021

Normative Analysis Of Individual Brain Differences Based On A Population Mri-Based Atlas Of Cynomolgus Macaques, Qiming Lv, Mingchao Yan, Xiangyu Shen, Jing Wu, Wenwen Yu, Shengyao Yan, Feng Yang, Kristina Zeljic, Yuequan Shi, Zuofu Zhou, Longbao Lv, Xintian Hu, Ravi Menon, Zheng Wang

Brain and Mind Institute Researchers' Publications

The developmental trajectory of the primate brain varies substantially with aging across subjects. However, this ubiquitous variability between individuals in brain structure is difficult to quantify and has thus essentially been ignored. Based on a large-scale structural magnetic resonance imaging dataset acquired from 162 cynomolgus macaques, we create a species-specific 3D template atlas of the macaque brain, and deploy normative modeling to characterize individual variations of cortical thickness (CT) and regional gray matter volume (GMV). We observed an overall decrease in total GMV and mean CT, and an increase in white matter volume from juvenile to early adult. Specifically, CT …

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Symbols Are Special: An Fmri Adaptation Study Of Symbolic, Nonsymbolic, And Non-Numerical Magnitude Processing In The Human Brain, H Moriah Sokolowski, Zachary Hawes, Lien Peters, Daniel Ansari Jan 2021

Symbols Are Special: An Fmri Adaptation Study Of Symbolic, Nonsymbolic, And Non-Numerical Magnitude Processing In The Human Brain, H Moriah Sokolowski, Zachary Hawes, Lien Peters, Daniel Ansari

Brain and Mind Institute Researchers' Publications

How are different formats of magnitudes represented in the human brain? We used functional magnetic resonance imaging adaptation to isolate representations of symbols, quantities, and physical size in 45 adults. Results indicate that the neural correlates supporting the passive processing of number symbols are largely dissociable from those supporting quantities and physical size, anatomically and representationally. Anatomically, passive processing of quantities and size correlate with activation in the right intraparietal sulcus, whereas symbolic number processing, compared with quantity processing, correlates with activation in the left inferior parietal lobule. Representationally, neural patterns of activation supporting symbols are dissimilar from neural activation …

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Spinal Cord Compression Is Associated With Brain Plasticity In Degenerative Cervical Myelopathy., Alicia E Cronin, Sarah A Detombe, Camille A Duggal, Neil Duggal, Robert Bartha Jan 2021

Spinal Cord Compression Is Associated With Brain Plasticity In Degenerative Cervical Myelopathy., Alicia E Cronin, Sarah A Detombe, Camille A Duggal, Neil Duggal, Robert Bartha

Brain and Mind Institute Researchers' Publications

The impact of spinal cord compression severity on brain plasticity and prognostic determinates is not yet fully understood. We investigated the association between the severity of spinal cord compression in patients with degenerative cervical myelopathy, a progressive disease of the spine, and functional plasticity in the motor cortex and subcortical areas using functional magnetic resonance imaging. A 3.0 T MRI scanner was used to acquire functional images of the brain in 23 degenerative cervical myelopathy patients. Patients were instructed to perform a structured finger-tapping task to activate the motor cortex to assess the extent of cortical activation. T

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