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Articles 151 - 180 of 696
Full-Text Articles in Biomedical Informatics
A Technical Survey On The Impact Of Exhaust Gas Recirculation And Multifuel Blends On Diesel Engine Performance And Emission Characteristics, Medhat Elkelawy Prof. Dr, Eng., Hagar Alm-Eldin Bastawissi Prof. Dr. Eng., E. A. El Shenawy Prof. Dr., Mustafa Mohamed Ouda Eng.
A Technical Survey On The Impact Of Exhaust Gas Recirculation And Multifuel Blends On Diesel Engine Performance And Emission Characteristics, Medhat Elkelawy Prof. Dr, Eng., Hagar Alm-Eldin Bastawissi Prof. Dr. Eng., E. A. El Shenawy Prof. Dr., Mustafa Mohamed Ouda Eng.
Journal of Engineering Research
The increasing demand for fossil fuels poses significant challenges as their reserves gradually deplete over time. Biodiesel is considered one of the most effective alternative fuels to mitigate these issues. Current research focuses on comparing engine performance parameters when blending biodiesel with fossil fuels in Compression Ignition (C.I.) engines. The study demonstrates a comparison of the exhaust emissions produced by biodiesel fuel. In comparison to diesel, biodiesel generally exhibits lower heating value, higher density, increased fuel consumption, and elevated nitrogen oxide levels. To address these challenges, various additives are mixed and blended with biodiesel to meet international fuel standards. These …
Heat And Mass Transfer Characteristics During Vacuum Drying Of Wood, Mohamed Salah Elmetwaly, Lotfy Hassan Rabie Saker, Mohamed Sameh Salem
Heat And Mass Transfer Characteristics During Vacuum Drying Of Wood, Mohamed Salah Elmetwaly, Lotfy Hassan Rabie Saker, Mohamed Sameh Salem
Journal of Engineering Research
The properties affecting the characteristics of heat and mass transfer during vacuum drying of wood are studied in this paper. The experimental work is carried out in 0.0365 m3 test rig vacuum dryer. The drying chamber dimensions are 0.5 m long and 0.305 m diameter carbon steel cylinder. This drying chamber is internally coated with epoxy paint, also this chamber is detachable closing caps at both ends meaning welded at one end and bolted at the other end to facilitate loading and unloading of the specimen. Two stainless steel heat exchanger plates with dimensions 0.3 m length, 0.15 m …
Prediction Of Noise From A Construction Site, Amira Mostafa Ibrahim Miss, Nashwa Mohamed Yossef Prof, Adel Ibrahim Eldosouky Emeritus Professor
Prediction Of Noise From A Construction Site, Amira Mostafa Ibrahim Miss, Nashwa Mohamed Yossef Prof, Adel Ibrahim Eldosouky Emeritus Professor
Journal of Engineering Research
Construction activities significantly contribute to environmental noise pollution, affecting workers' health and the surrounding community, posing significant challenges to human well-being and productivity. This paper presents a prediction method and a modelling technique used to assess construction site noise. Various factors influencing noise generation and propagation, such as equipment types, operational conditions, site characteristics, and environmental factors, are discussed. This paper explores the application of Monte Carlo technique as an effective method for predicting construction site noise and planning noise mitigation strategies.
Numerical Investigation Of Liquefaction Mitigation In-Sandy Soils Under Earthquake Loading Using Vertical Gravel Drains., Marawan M. Shahien M. Shahein, Ahmed Nasr, Baher Mohamed Abd El Fattah
Numerical Investigation Of Liquefaction Mitigation In-Sandy Soils Under Earthquake Loading Using Vertical Gravel Drains., Marawan M. Shahien M. Shahein, Ahmed Nasr, Baher Mohamed Abd El Fattah
Journal of Engineering Research
Liquefaction is one of the most dramatic defects of granular soil. This phenomenon is mostly observed when loose sand is subjected to a dynamic load or earthquake. In this study, the liquefaction that affected the loose soil evaluated, and some recommendations are introduced. (2-D) Numerical analysis using Plaxis (8.2) was conducted to simulate the behavior of the loose soil under dynamic loads. The studied model was carried out on multi-layers soil supported by stone columns subjected to dynamic loads. It was found that stone columns enhanced the soil behavior and reduced the damage that occurred. Liquefaction of the loose soil …
Chemical Kinetic Investigation: Exploring The Impact Of Various Concentrations Of Hho Gas With A 40% Biodiesel/Diesel Blend On Hcci Combustion, Mai H. Aboubakr, Medhat Elkelawy Prof. Dr, Eng., Hagar Alm-Eldin Bastawissi, Ayman Refat Abd Elbar
Chemical Kinetic Investigation: Exploring The Impact Of Various Concentrations Of Hho Gas With A 40% Biodiesel/Diesel Blend On Hcci Combustion, Mai H. Aboubakr, Medhat Elkelawy Prof. Dr, Eng., Hagar Alm-Eldin Bastawissi, Ayman Refat Abd Elbar
Journal of Engineering Research
This study uses the Chemkin software program to evaluate the effect of different quantities of oxyhydrogen gas [HHO] added to 40% biodiesel and diesel mix [B40], including B40, B40+5HHO, B40+10HHO, and B40+15HHO, on the HCCI combustion process's efficiency. The information collected includes cylinder pressure, cylinder temperature, accumulated gas phase heat release, heat loss rate, UHC, and mole fractions of O2, CO, CO2, diesel [NC7H16], biodiesel [C5H10O2], and oxyhydrogen [H2O]. The finding is that, when compared to a blend of biodiesel and diesel, using oxyhydrogen in the biodiesel/diesel mix boosts the properties of the HCCI engine.
Exploring The Influence Of Various Factors, Including Initial Temperatures, Equivalence Ratios, And Different Biodiesel/Diesel Blend Ratios, On Homogeneous Charge Compression Ignition (Hcci) Combustion, Mai H. Aboubakr, Medhat Elkelawy Prof. Dr, Eng., Hagar Alm-Eldin Bastawissi, Ayman Refat Abd Elbar
Exploring The Influence Of Various Factors, Including Initial Temperatures, Equivalence Ratios, And Different Biodiesel/Diesel Blend Ratios, On Homogeneous Charge Compression Ignition (Hcci) Combustion, Mai H. Aboubakr, Medhat Elkelawy Prof. Dr, Eng., Hagar Alm-Eldin Bastawissi, Ayman Refat Abd Elbar
Journal of Engineering Research
This paper discusses the impact of three study cases that change with different values: the first case is four initial temperature values [313, 323, 333, and 343 K], the second case is three equivalence ratios [0.2, 0.3, and 0.4], and the third case uses various concentrations of biodiesel and diesel mixes [D100, B20, B40, B60, B80, and B100]. The purpose is to use the Chemkin software program to determine the effectiveness of each case in the HCCI combustion process. The results included cylinder pressure, cylinder temperature, accumulated gas phase heat release, heat loss rate, UHC, and mole fractions of O …
Survey And Analysis Of Safety Components And Costs In Construction Projects In Egypt, Emad E. Etman Prof., Haytham Sanad Prof., Asmaa Ibrahim Khater
Survey And Analysis Of Safety Components And Costs In Construction Projects In Egypt, Emad E. Etman Prof., Haytham Sanad Prof., Asmaa Ibrahim Khater
Journal of Engineering Research
The difficulty of determining the factors that achieve safety on Egyptian construction sites as a result of multiple and different criteria and different relative weights of the criteria represents a challenge to achieve safety and a secure environment on construction sites. This issue has been of interest for many decades and continues to be a topic of discussion today because of construction project management is rapidly modernizing. The paper aims to identify the safety standards most commonly used on construction sites, and determine their relative weights as seen by the target audience and also estimate the cost of safety measures …
Enhancing Decision In Information System Through Weighted Preliminary Pretopology Analysis, Mustafa Elsayed, Rifet Agassi
Enhancing Decision In Information System Through Weighted Preliminary Pretopology Analysis, Mustafa Elsayed, Rifet Agassi
Journal of Engineering Research
It is clear from adequate study of the past decades that there has been rapid growth in the information system, which relies mainly on programming systems. This has led to the necessity of dealing with high efficiency with the information system necessary for decision support. Information systems are a mixture of software and hardware to store and process all the data required and are presented in a useful form to extract information by applying topological concepts. In this paper a pretopological space from an information system is to be constructed. The computation of decision accuracy stands as a pivotal stage …
تحسين كفاءه التوازن الحرارى لمستخدمى الفراغات السكنيه, Alamera Kamal Elden Elfeky, Elamira Elfeky, Walaa Ahmed Nour, Lobna Abdallah Agha
تحسين كفاءه التوازن الحرارى لمستخدمى الفراغات السكنيه, Alamera Kamal Elden Elfeky, Elamira Elfeky, Walaa Ahmed Nour, Lobna Abdallah Agha
Journal of Engineering Research
human belonging to nature Considered innate, and known as Biophilie, it has direct and strong relation with human heath and his welfare which affected by quality of internal environment where we Live and work as we spend most of our time in this environment. Biophelic design Aim to improve heath and welfare of human. natural. and reconnect him with his natural environment beside achieving the aesthetic aspect of his place.
in our present time, gap appeared in relation between human and environment as a result of modern design solution, as it has negative effect on human heath and safety, to …
Context-Dependent T-Box Transcription Factor Family: From Biology To Targeted Therapy, Siwen Li, Xiangyuan Luo, Mengyu Sun, Yijun Wang, Zerui Zhang, Junqing Jiang, Dian Hu, Jiaqian Zhang, Zhangfan Wu, Yufei Wang, Wenjie Huang, Limin Xia
Context-Dependent T-Box Transcription Factor Family: From Biology To Targeted Therapy, Siwen Li, Xiangyuan Luo, Mengyu Sun, Yijun Wang, Zerui Zhang, Junqing Jiang, Dian Hu, Jiaqian Zhang, Zhangfan Wu, Yufei Wang, Wenjie Huang, Limin Xia
Faculty, Staff and Student Publications
T-BOX factors belong to an evolutionarily conserved family of transcription factors. T-BOX factors not only play key roles in growth and development but are also involved in immunity, cancer initiation, and progression. Moreover, the same T-BOX molecule exhibits different or even opposite effects in various developmental processes and tumor microenvironments. Understanding the multiple roles of context-dependent T-BOX factors in malignancies is vital for uncovering the potential of T-BOX-targeted cancer therapy. We summarize the physiological roles of T-BOX factors in different developmental processes and their pathological roles observed when their expression is dysregulated. We also discuss their regulatory roles in tumor …
The Protective Efficacy Of A Sars-Cov-2 Vaccine Candidate B1351v Against Several Variant Challenges In K18-Hace2 Mice, Jie Yang, Huifen Fan, Anna Yang, Wenhui Wang, Xin Wan, Fengjie Lin, Dongsheng Yang, Jie Wu, Kaiwen Wang, Wei Li, Qian Cai, Lei You, Deqin Pang, Jia Lu, Changfu Guo, Jinrong Shi, Yan Sun, Xinguo Li, Kai Duan, Shuo Shen, Shengli Meng, Jing Guo, Zejun Wang
The Protective Efficacy Of A Sars-Cov-2 Vaccine Candidate B1351v Against Several Variant Challenges In K18-Hace2 Mice, Jie Yang, Huifen Fan, Anna Yang, Wenhui Wang, Xin Wan, Fengjie Lin, Dongsheng Yang, Jie Wu, Kaiwen Wang, Wei Li, Qian Cai, Lei You, Deqin Pang, Jia Lu, Changfu Guo, Jinrong Shi, Yan Sun, Xinguo Li, Kai Duan, Shuo Shen, Shengli Meng, Jing Guo, Zejun Wang
Faculty, Staff and Student Publications
The emergence of SARS-CoV-2 variants of concern (VOCs) with increased transmissibility and partial resistance to neutralization by antibodies has been observed globally. There is an urgent need for an effective vaccine to combat these variants. Our study demonstrated that the B.1.351 variant inactivated vaccine candidate (B.1.351V) generated strong binding and neutralizing antibody responses in BALB/c mice against the B.1.351 virus and other SARS-CoV-2 variants after two doses within 28 days. Immunized K18-hACE2 mice also exhibited elevated levels of live virus-neutralizing antibodies against various SARS-CoV-2 viruses. Following infection with these viruses, K18-hACE2 mice displayed a stable body weight, a high survival …
A/B Testing Of User Enrollment Forms To Enhance Diversity In The Biomedical Workforce Via The National Research Mentoring Network: User-Centered Design Case Study, Toufeeq Ahmed Syed, Erika L Thompson, Jason Johnson, Zainab Latif, Nan Kennedy, Damaris Javier, Katie Stinson, Jamboor K Vishwanatha
A/B Testing Of User Enrollment Forms To Enhance Diversity In The Biomedical Workforce Via The National Research Mentoring Network: User-Centered Design Case Study, Toufeeq Ahmed Syed, Erika L Thompson, Jason Johnson, Zainab Latif, Nan Kennedy, Damaris Javier, Katie Stinson, Jamboor K Vishwanatha
Faculty, Staff and Student Publications
BACKGROUND: The National Research Mentoring Network (NRMN) is a National Institutes of Health-funded program for diversifying the science, technology, engineering, math, and medicine research workforce through the provision of mentoring, networking, and professional development resources. The NRMN provides mentoring resources to members through its online platform-MyNRMN.
OBJECTIVE: MyNRMN helps members build a network of mentors. Our goal was to expand enrollment and mentoring connections, especially among those who have been historically underrepresented in biomedical training and the biomedical workforce.
METHODS: To improve the ease of enrollment, we implemented the split testing of iterations of our user interface for platform registration. …
Influence Of Polypyrrole On Phosphorus- And Tio2-Based Anode Nanomaterials For Li-Ion Batteries, Chiwon Kang, Kibum Song, Seungho Ha, Yujin Sung, Yejin Kim, Keun-Young Shin, Byung Hyo Kim
Influence Of Polypyrrole On Phosphorus- And Tio2-Based Anode Nanomaterials For Li-Ion Batteries, Chiwon Kang, Kibum Song, Seungho Ha, Yujin Sung, Yejin Kim, Keun-Young Shin, Byung Hyo Kim
Faculty, Staff and Student Publications
Phosphorus (P) and TiO2 have been extensively studied as anode materials for lithium-ion batteries (LIBs) due to their high specific capacities. However, P is limited by low electrical conductivity and significant volume changes during charge and discharge cycles, while TiO2 is hindered by low electrical conductivity and slow Li-ion diffusion. To address these issues, we synthesized organic–inorganic hybrid anode materials of P–polypyrrole (PPy) and TiO2–PPy, through in situ polymerization of pyrrole monomer in the presence of the nanoscale inorganic materials. These hybrid anode materials showed higher cycling stability and capacity compared to pure P and TiO2. The enhancements are attributed …
Towards Environmentally Sustainable Preservation Of Heritage Buildings, Rozal Rozal Yousef Hanna1, Ayman Gamal El-Din Abd El- Tawab2, Walaa Abou El- Haggag Mehanna3
Towards Environmentally Sustainable Preservation Of Heritage Buildings, Rozal Rozal Yousef Hanna1, Ayman Gamal El-Din Abd El- Tawab2, Walaa Abou El- Haggag Mehanna3
Journal of Engineering Research
The construction industry, characterized by its intricate processes and extensive stakeholder networks, stands at the cusp of a digital revolution. The adoption of blockchain-smart contract (BCSC) technology is at the heart of this transformation. This research delves deep into the BCSC within the construction arena to provide comprehensive insight into its probable applications, inherent challenges, and potential future trajectories. Leveraging the PRISMA analysis technique, a curated collection of relevant academic research articles was assembled, shedding light on the existing body of knowledge regarding the application of BCSC technology in construction. The authors developed an innovative user interface tool customized to …
Review: Protection Of Wooden Structures With Nano-Titanium Dioxide Coating, Zienab Zienab A. Ahmed1*, And M. M. Mosallem2
Review: Protection Of Wooden Structures With Nano-Titanium Dioxide Coating, Zienab Zienab A. Ahmed1*, And M. M. Mosallem2
Journal of Engineering Research
Wood is widely used for various purposes with good performance. Wood works as the main material for furniture, monuments, decorations and constructions. which has the close relationship with human. Durability of wood is important in ensuring an appropriate life for the structure being designed. Wooden construction deteriorates easily due to UV radiation and weather conditions. Many of wood types need a preservative treatment. Several compounds are available for chemical protection, but not all are completely safe for human health. New technologies with low environmental impact and economically feasible are developed, which improves the life cycle of wood. Titanium dioxide is …
Urbanism Strategies For Linking Existing And New Cities, Naglaa J. Q. Mo’Men Abdel-Qader Ebrahim1, Mohsen Bayad2
Urbanism Strategies For Linking Existing And New Cities, Naglaa J. Q. Mo’Men Abdel-Qader Ebrahim1, Mohsen Bayad2
Journal of Engineering Research
New cities, designed for urban growth outside existing metropolitan regions, face challenges in street infrastructure due to rapid expansion. Efficient control of mobility is crucial as cities grow. Sustainable transportation involves factors like infrastructure, public transit, delivery networks, affordability, efficiency, air quality, health, and reduced emissions. Commuting between established and new urban areas is common, leading to issues like urban sprawl, longer travel times, and congestion in developing countries. The challenge is to improve accessibility while addressing air quality, traffic, congestion, noise, built environment, emissions, and sprawl. This study aims to explore factors influencing mobility choices in Egypt, focusing on …
Fedgmmat: Federated Generalized Linear Mixed Model Association Tests, Wentao Li, Han Chen, Xiaoqian Jiang, Arif Harmanci
Fedgmmat: Federated Generalized Linear Mixed Model Association Tests, Wentao Li, Han Chen, Xiaoqian Jiang, Arif Harmanci
Faculty, Staff and Student Publications
Increasing genetic and phenotypic data size is critical for understanding the genetic determinants of diseases. Evidently, establishing practical means for collaboration and data sharing among institutions is a fundamental methodological barrier for performing high-powered studies. As the sample sizes become more heterogeneous, complex statistical approaches, such as generalized linear mixed effects models, must be used to correct for the confounders that may bias results. On another front, due to the privacy concerns around Protected Health Information (PHI), genetic information is restrictively protected by sharing according to regulations such as Health Insurance Portability and Accountability Act (HIPAA). This limits data sharing …
Identification Of Immune-Associated Biomarkers Of Diabetes Nephropathy Tubulointerstitial Injury Based On Machine Learning: A Bioinformatics Multi-Chip Integrated Analysis, Lin Wang, Jiaming Su, Zhongjie Liu, Shaowei Ding, Yaotan Li, Baoluo Hou, Yuxin Hu, Zhaoxi Dong, Jingyi Tang, Hongfang Liu, Weijing Liu
Identification Of Immune-Associated Biomarkers Of Diabetes Nephropathy Tubulointerstitial Injury Based On Machine Learning: A Bioinformatics Multi-Chip Integrated Analysis, Lin Wang, Jiaming Su, Zhongjie Liu, Shaowei Ding, Yaotan Li, Baoluo Hou, Yuxin Hu, Zhaoxi Dong, Jingyi Tang, Hongfang Liu, Weijing Liu
Faculty, Staff and Student Publications
BACKGROUND: Diabetic nephropathy (DN) is a major microvascular complication of diabetes and has become the leading cause of end-stage renal disease worldwide. A considerable number of DN patients have experienced irreversible end-stage renal disease progression due to the inability to diagnose the disease early. Therefore, reliable biomarkers that are helpful for early diagnosis and treatment are identified. The migration of immune cells to the kidney is considered to be a key step in the progression of DN-related vascular injury. Therefore, finding markers in this process may be more helpful for the early diagnosis and progression prediction of DN.
METHODS: The …
Ghcu, A Molecular Chaperone, Regulates Leaf Curling By Modulating The Distribution Of Kngh1 In Cotton, Yihao Zang, Chenyu Xu, Lishan Yu, Longen Ma, Lisha Xuan, Sunyi Yan, Yayao Zhang, Yiwen Cao, Xiaoran Li, Zhanfeng Si, Jieqiong Deng, Tianzhen Zhang, Yan Hu
Ghcu, A Molecular Chaperone, Regulates Leaf Curling By Modulating The Distribution Of Kngh1 In Cotton, Yihao Zang, Chenyu Xu, Lishan Yu, Longen Ma, Lisha Xuan, Sunyi Yan, Yayao Zhang, Yiwen Cao, Xiaoran Li, Zhanfeng Si, Jieqiong Deng, Tianzhen Zhang, Yan Hu
Faculty, Staff and Student Publications
Leaf shape is considered to be one of the most significant agronomic traits in crop breeding. However, the molecular basis underlying leaf morphogenesis in cotton is still largely unknown. In this study, through genetic mapping and molecular investigation using a natural cotton mutant cu with leaves curling upward, the causal gene GHCU is successfully identified as the key regulator of leaf flattening. Knockout of GHCU or its homolog in cotton and tobacco using CRISPR results in abnormal leaf shape. It is further discovered that GHCU facilitates the transport of the HD protein KNOTTED1-like (KNGH1) from the adaxial to the abaxial …
Genetic Analysis Of Seven Patients With Inherited Ichthyosis And Nagashima-Type Palmoplantar Keratoderma, Jing Zhang, Yue Yao, Ya Tan, Hua-Ying Hu, Lin-Xi Zeng, Guo-Qiang Zhang
Genetic Analysis Of Seven Patients With Inherited Ichthyosis And Nagashima-Type Palmoplantar Keratoderma, Jing Zhang, Yue Yao, Ya Tan, Hua-Ying Hu, Lin-Xi Zeng, Guo-Qiang Zhang
Faculty, Staff and Student Publications
Inherited ichthyosis comprises a series of heterogeneous dermal conditions; it mainly manifests as widespread hyperkeratosis, xerosis and scaling of the skin. At times, overlapping symptoms require differential diagnosis between ichthyosis and several other similar disorders. The present study reports seven patients with confirmed or suspected to be associated with ichthyosis by conducting a thorough clinical and genetic investigation. Genetic testing was conducted using whole-exome sequencing, with Sanger sequencing as the validation method. The MEGA7 program was used to analyze the conservation of amino acid residues affected by the detected missense variants. The enrolled patients exhibited ichthyosis-like but distinct clinical manifestations. …
Metabolomics Analysis Reveals Metabolite Diversity Of The Rare Cliff Plant Oresitrophe Rupifraga Unge, Hao Wang, Jinjun Cao, Sheng Chang, Caifeng Yan, Guangming Zhang
Metabolomics Analysis Reveals Metabolite Diversity Of The Rare Cliff Plant Oresitrophe Rupifraga Unge, Hao Wang, Jinjun Cao, Sheng Chang, Caifeng Yan, Guangming Zhang
Faculty, Staff and Student Publications
Oresitrophe is monotypic, with the only species, Oresitrophe rupifraga Bunge, which is exclusive to China, having special growth and developmental traits due to its habitat. Furthermore, it has bright flowers and medicinal benefits. This study investigated the metabolites present in various tissues of Oresitrophe rupifraga Bunge. Using a widely targeted metabolomics approach, 1965 different metabolites were identified in Oresitrophe rupifraga Bunge. Based on principal component analysis (PCA) and orthogonal partial least squares discriminant analysis (OPLS-DA), the aboveground and underground metabolites of Oresitrophe rupifraga differed significantly. The comparison between bulblets and leaves revealed the differential expression of 461 metabolites, whereas the …
Considerations For Quality Control Monitoring Of Machine Learning Models In Clinical Practice, Louis Faust, Patrick Wilson, Shusaku Asai, Sunyang Fu, Hongfang Liu, Xiaoyang Ruan, Curt Storlie
Considerations For Quality Control Monitoring Of Machine Learning Models In Clinical Practice, Louis Faust, Patrick Wilson, Shusaku Asai, Sunyang Fu, Hongfang Liu, Xiaoyang Ruan, Curt Storlie
Faculty, Staff and Student Publications
Integrating machine learning (ML) models into clinical practice presents a challenge of maintaining their efficacy over time. While existing literature offers valuable strategies for detecting declining model performance, there is a need to document the broader challenges and solutions associated with the real-world development and integration of model monitoring solutions. This work details the development and use of a platform for monitoring the performance of a production-level ML model operating in Mayo Clinic. In this paper, we aimed to provide a series of considerations and guidelines necessary for integrating such a platform into a team's technical infrastructure and workflow. We …
Discovery Of Runs-Of-Homozygosity Diplotype Clusters And Their Associations With Diseases In Uk Biobank, Ardalan Naseri, Degui Zhi, Shaojie Zhang
Discovery Of Runs-Of-Homozygosity Diplotype Clusters And Their Associations With Diseases In Uk Biobank, Ardalan Naseri, Degui Zhi, Shaojie Zhang
Faculty, Staff and Student Publications
Runs-of-homozygosity (ROH) segments, contiguous homozygous regions in a genome were traditionally linked to families and inbred populations. However, a growing literature suggests that ROHs are ubiquitous in outbred populations. Still, most existing genetic studies of ROH in populations are limited to aggregated ROH content across the genome, which does not offer the resolution for mapping causal loci. This limitation is mainly due to a lack of methods for the efficient identification of shared ROH diplotypes. Here, we present a new method, ROH-DICE (runs-of-homozygous diplotype cluster enumerator), to find large ROH diplotype clusters, sufficiently long ROHs shared by a sufficient number …
Study Of Prognostic Splicing Factors In Cancer Using Machine Learning Approaches, Mengyuan Yang, Jiajia Liu, Pora Kim, Xiaobo Zhou
Study Of Prognostic Splicing Factors In Cancer Using Machine Learning Approaches, Mengyuan Yang, Jiajia Liu, Pora Kim, Xiaobo Zhou
Faculty, Staff and Student Publications
Splicing factors (SFs) are the major RNA-binding proteins (RBPs) and key molecules that regulate the splicing of mRNA molecules through binding to mRNAs. The expression of splicing factors is frequently deregulated in different cancer types, causing the generation of oncogenic proteins involved in cancer hallmarks. In this study, we investigated the genes that encode RNA-binding proteins and identified potential splicing factors that contribute to the aberrant splicing applying a random forest classification model. The result suggested 56 splicing factors were related to the prognosis of 13 cancers, two SF complexes in liver hepatocellular carcinoma, and one SF complex in esophageal …
Successful Management Of Chromoblastomycosis Utilizing Conventional Antifungal Agents And Imiquimod Therapy, Jinjin Zheng, Shougang Liu, Zhenmou Xie, Yangxia Chen, Liyan Xi, Hongfang Liu, Yinghui Liu
Successful Management Of Chromoblastomycosis Utilizing Conventional Antifungal Agents And Imiquimod Therapy, Jinjin Zheng, Shougang Liu, Zhenmou Xie, Yangxia Chen, Liyan Xi, Hongfang Liu, Yinghui Liu
Faculty, Staff and Student Publications
Chromoblastomycosis (CBM), a chronic fungal infection affecting the skin and subcutaneous tissues, is predominantly caused by dematiaceous fungi in tropical and subtropical areas. Characteristically, CBM presents as plaques and nodules, often leading to scarring post-healing. Besides traditional diagnostic methods such as fungal microscopy, culture, and histopathology, dermatoscopy and reflectance confocal microscopy can aid in diagnosis. The treatment of CBM is an extended and protracted process. Imiquimod, acting as an immune response modifier, boosts the host's immune response against CBM, and controls scar hyperplasia, thereby reducing the treatment duration. We present a case of CBM in Guangdong with characteristic reflectance confocal …
Diverse Mentoring Connections Across Institutional Boundaries In The Biomedical Sciences: Innovative Graph Database Analysis, Toufeeq Ahmed Syed, Erika L Thompson, Zainab Latif, Jay Johnson, Damaris Javier, Katie Stinson, Gabrielle Saleh, Jamboor K Vishwanatha
Diverse Mentoring Connections Across Institutional Boundaries In The Biomedical Sciences: Innovative Graph Database Analysis, Toufeeq Ahmed Syed, Erika L Thompson, Zainab Latif, Jay Johnson, Damaris Javier, Katie Stinson, Gabrielle Saleh, Jamboor K Vishwanatha
Faculty, Staff and Student Publications
BACKGROUND: With an overarching goal of increasing diversity and inclusion in biomedical sciences, the National Research Mentoring Network (NRMN) developed a web-based national mentoring platform (MyNRMN) that seeks to connect mentors and mentees to support the persistence of underrepresented minorities in the biomedical sciences. As of May 15, 2024, the MyNRMN platform, which provides mentoring, networking, and professional development tools, has facilitated more than 12,100 unique mentoring connections between faculty, students, and researchers in the biomedical domain.
OBJECTIVE: This study aimed to examine the large-scale mentoring connections facilitated by our web-based platform between students (mentees) and faculty (mentors) across institutional …
Sre-Yolov8: : An Improved Uav Object Detection Model Utilizing Swin Transformer And Re-Fpn, Jun Li, Jiajie Zhang, Yanhua Shao, Feng Liu
Sre-Yolov8: : An Improved Uav Object Detection Model Utilizing Swin Transformer And Re-Fpn, Jun Li, Jiajie Zhang, Yanhua Shao, Feng Liu
Faculty, Staff and Student Publications
To tackle the intricate challenges associated with the low detection accuracy of images taken by unmanned aerial vehicles (UAVs), arising from the diverse sizes and types of objects coupled with limited feature information, we present the SRE-YOLOv8 as an advanced method. Our method enhances the YOLOv8 object detection algorithm by leveraging the Swin Transformer and a lightweight residual feature pyramid network (RE-FPN) structure. Firstly, we introduce an optimized Swin Transformer module into the backbone network to preserve ample global contextual information during feature extraction and to extract a broader spectrum of features using self-attention mechanisms. Subsequently, we integrate a Residual …
Prevalence And Relevant Factors Of Nocturia And Its Impact On Sleep Quality In Chinese University Students, Yakai Liu, Zhenwei Zhang, Huijie Hu, Xiangfei He, Pengchao Xu, Qifeng Dou, Cuiping Song, Huiqing Zhang, Israel Franco, Konstantinos Kamperis, Søren Rittig, Jianguo Wen
Prevalence And Relevant Factors Of Nocturia And Its Impact On Sleep Quality In Chinese University Students, Yakai Liu, Zhenwei Zhang, Huijie Hu, Xiangfei He, Pengchao Xu, Qifeng Dou, Cuiping Song, Huiqing Zhang, Israel Franco, Konstantinos Kamperis, Søren Rittig, Jianguo Wen
Faculty, Staff and Student Publications
The purpose of this study was to investigate the prevalence and relevant factors of nocturia and its impact on sleep quality in university students in Mainland China. A large-scale survey was conducted on 14,000 university students from 3 universities in Henan province, China by using an anonymous questionnaire. The questionnaire collected the information from the past six months. The relationships between the prevalence of nocturia and its relevant factors were evaluated. A total of 13,874 questionnaires were collected and 13,104 qualified for statistical analysis. A total of 659 students suffered from clinically relevant nocturia (CRN) (4.56% in male and 5.34% …
Semirecumbent Positioning During Anesthesia Recovery And Postoperative Hypoxemia: A Randomized Clinical Trial, Xinghe Wang, Kedi Guo, Jia Sun, Yuping Yang, Yan Wu, Xihui Tang, Yuqing Xu, Qingsong Chen, Si Zeng, Liwei Wang, Su Liu
Semirecumbent Positioning During Anesthesia Recovery And Postoperative Hypoxemia: A Randomized Clinical Trial, Xinghe Wang, Kedi Guo, Jia Sun, Yuping Yang, Yan Wu, Xihui Tang, Yuqing Xu, Qingsong Chen, Si Zeng, Liwei Wang, Su Liu
Faculty, Staff and Student Publications
IMPORTANCE: The efficacy of a semirecumbent position (SRP) in reducing postoperative hypoxemia during anesthesia emergence is unclear despite its widespread use.
OBJECTIVE: To determine the differences in postoperative hypoxemia between patients in an SRP and a supine position.
DESIGN, SETTING, AND PARTICIPANTS: This randomized clinical trial was performed at a tertiary hospital in China between March 20, 2021, and May 10, 2022. Patients scheduled to undergo laparoscopic upper abdominal surgery under general anesthesia were enrolled. Study recruitment and follow-up are complete.
INTERVENTIONS: Patients were randomized to 1 of the following positions at the end of the operation until leaving the …
Radiogenomics-Based Risk Prediction Of Glioblastoma Multiforme With Clinical Relevance, Xiaohua Qian, Hua Tan, Xiaona Liu, Weiling Zhao, Michael D Chan, Pora Kim, Xiaobo Zhou
Radiogenomics-Based Risk Prediction Of Glioblastoma Multiforme With Clinical Relevance, Xiaohua Qian, Hua Tan, Xiaona Liu, Weiling Zhao, Michael D Chan, Pora Kim, Xiaobo Zhou
Faculty, Staff and Student Publications
Glioblastoma multiforme (GBM)is the most common and aggressive primary brain tumor. Although temozolomide (TMZ)-based radiochemotherapy improves overall GBM patients' survival, it also increases the frequency of false positive post-treatment magnetic resonance imaging (MRI) assessments for tumor progression. Pseudo-progression (PsP) is a treatment-related reaction with an increased contrast-enhancing lesion size at the tumor site or resection margins miming tumor recurrence on MRI. The accurate and reliable prognostication of GBM progression is urgently needed in the clinical management of GBM patients. Clinical data analysis indicates that the patients with PsP had superior overall and progression-free survival rates. In this study, we aimed …