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2015

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Full-Text Articles in Systems Biology

Suppression Of F1 Male-Specific Lethality In Caenorhabditis Hybrids By Cbr-Him-8, Vaishnavi Ragavapuram, Emily Elaine King, Scott Everet Baird Dec 2015

Suppression Of F1 Male-Specific Lethality In Caenorhabditis Hybrids By Cbr-Him-8, Vaishnavi Ragavapuram, Emily Elaine King, Scott Everet Baird

Biological Sciences Faculty Publications

Haldane's Rule and Darwin's Corollary to Haldane's Rule are the observations that heterogametic F1 hybrids frequently are less fit than their homogametic siblings and that asymmetric results often are obtained from reciprocal hybrid crosses. In Caenorhabditis, Haldane's Rule and Darwin's Corollary have been observed in several hybrid crosses, including crosses of Caenorhabditis briggsae and Caenorhabditis nigoni. Fertile F1 females are obtained from reciprocal crosses. However, F1 males obtained from C. nigoni mothers are sterile and F1 males obtained from C. briggsae die during embryogenesis. We have identified cbr-him-8 as a recessive maternal-effect suppressor of F1 hybrid male-specific lethality …


Are Immune Modulating Single Nucleotide Polymorphisms Associated With Necrotizing Enterocolitis?, Ashanti L Franklin, Mariam Said, Clint D Cappiello, Heather Gordish-Dressman, Zohreh Tatari-Calderone, Stanislav Vukmanovic, Khodayar Rais-Bahrami, Naomi L C Luban, Joseph M Devaney, Anthony D Sandler Dec 2015

Are Immune Modulating Single Nucleotide Polymorphisms Associated With Necrotizing Enterocolitis?, Ashanti L Franklin, Mariam Said, Clint D Cappiello, Heather Gordish-Dressman, Zohreh Tatari-Calderone, Stanislav Vukmanovic, Khodayar Rais-Bahrami, Naomi L C Luban, Joseph M Devaney, Anthony D Sandler

Genomics and Precision Medicine Faculty Publications

Necrotizing enterocolitis (NEC) is a devastating gastrointestinal emergency. The purpose of this study is to determine if functional single nucleotide polymorphisms (SNPs) in immune-modulating genes pre-dispose infants to NEC. After Institutional Review Board approval and parental consent, buccal swabs were collected for DNA extraction. TaqMan allelic discrimination assays and BglII endonuclease digestion were used to genotype specific inflammatory cytokines and TRIM21. Statistical analysis was completed using logistic regression. 184 neonates were analyzed in the study. Caucasian neonates with IL-6 (rs1800795) were over 6 times more likely to have NEC (p = 0.013; OR = 6.61, 95% CI 1.48-29.39), and over …


North Shore: A Natural History Of Minnesota’S Superior Coast, Janet R. Keough Dec 2015

North Shore: A Natural History Of Minnesota’S Superior Coast, Janet R. Keough

The Prairie Naturalist

Many readers of The Prairie Naturalist have lived along or visited Lake Superior’s coast. Like me, you have probably wondered about the geology and history of this beautiful and dramatic feature of northeastern Minnesota. Chel Anderson and Adelheid Fischer have written an accessible book that comprehensively describes the history and geology of the coast, surrounding highlands, and Lake Superior itself. In addition, the authors have provided fascinating subchapters on some of the most interesting species that are key elements of the region.

This rather large but beautiful book is arranged in five major chapters that cover the dominant geological units …


Sage-Grouse Nests In An Active Conifer Mastication Site, Charles P. Sandford, David K. Dahlgren, Terry A. Messmer Dec 2015

Sage-Grouse Nests In An Active Conifer Mastication Site, Charles P. Sandford, David K. Dahlgren, Terry A. Messmer

The Prairie Naturalist

Greater sage-grouse (Centrocercus urophasianus; sage-grouse) have experienced long-term range-wide population declines and now may occupy less than 50% of their historic range (Schroeder et al. 2004). Conifer encroachment into sagebrush (Artemisia spp.) habitat was identified as a major conservation threat by the United States Fish and Wildlife Service (USFWS) as the agency reviewed the listing status of the species for possible protection under the Endangered Species Act of 1973 (USFWS 2013).

Conifer encroachment into sagebrush habitats negatively impacts sage-grouse at landscape scales (Doherty et al. 2008, Casazza et al. 2011, Baruch-Mordo et al. 2013). Sage-grouse will utilize …


North Shore: A Natural History Of Minnesota’S Superior Coast, Janet R. Koeugh Dec 2015

North Shore: A Natural History Of Minnesota’S Superior Coast, Janet R. Koeugh

The Prairie Naturalist

Many readers of The Prairie Naturalist have lived along or visited Lake Superior’s coast. Like me, you have probably wondered about the geology and history of this beautiful and dramatic feature of northeastern Minnesota. Chel Anderson and Adelheid Fischer have written an accessible book that comprehensively describes the history and geology of the coast, surrounding highlands, and Lake Superior itself. In addition, the authors have provided fascinating subchapters on some of the most interesting species that are key elements of the region.

This rather large but beautiful book is arranged in five major chapters that cover the dominant geological units …


Remembering The Days Of Old: Data Exploration And Simple Statistics, Christopher N. Jacques Dec 2015

Remembering The Days Of Old: Data Exploration And Simple Statistics, Christopher N. Jacques

The Prairie Naturalist

Greetings GPNSS members! By the time you read this editorial, most of you will probably be enjoying spectacular seasonal changes in the outdoors this autumn and a hint of winter in the air (for those of us in the northern Great Plains region). I write this editorial during my favorite time of year, deer hunting in the Midwest. Temperatures are finally start- ing to resemble the fall and the Christmas Holiday season is just around the corner. Much like my children have images of Santa dancing in their heads on Christmas Eve, each fall I replay images of a trophy …


Effects Of Short-Term Soil Conditioning By Cheatgrass And Western Wheatgrass, James J. O'Connor, Janet S. Prevey Dec 2015

Effects Of Short-Term Soil Conditioning By Cheatgrass And Western Wheatgrass, James J. O'Connor, Janet S. Prevey

The Prairie Naturalist

The exotic grass Bromus tectorum (cheatgrass) is a ubiquitous invader in the western USA. Cheatgrass is a proficient competitor, frequently displacing native plants, forming monotypic stands and reducing biodiversity in ecosystems it invades. Our experiment tested whether short-term soil modification by cheatgrass and a predominant native grass, Pascopyrum smithii (western wheatgrass), affected subsequent growth of both species. We compared productivity of cheatgrass and western wheatgrass by harvesting aboveground biomass of plants grown in either cheatgrass- or western wheatgrass-conditioned soils over two simulated growing seasons. Results indicated that cheatgrass soils do not inhibit the productivity of the native grass, but do …


Estimating Herbaceous Biomass Of Grassland Vegetation Using The Reference Unit Method, Eric D. Boyda, Jack L. Bulter, Lan Xu Dec 2015

Estimating Herbaceous Biomass Of Grassland Vegetation Using The Reference Unit Method, Eric D. Boyda, Jack L. Bulter, Lan Xu

The Prairie Naturalist

Aboveground net primary production provides valuable information on wildlife habitat, fire fuel loads, and forage availability. Aboveground net primary production in herbaceous plant communities is typically measured by clipping aboveground biomass. However, the high costs associated with physically harvesting plant biomass may prevent collecting sufficient data to account for natural spatial and temporal variability of vegetation at a landscape scale. Various double-sampling techniques have been developed to increase sample size while reducing cost. We applied a biomass estimation technique previously developed for estimating shrub biomass using representative samples or “reference units” to estimate herbaceous grassland biomass. Our reference units consisted …


Distribution And Occurrence Of Bat Species In North Dakota, Josiah J. Nelson, Paul R. Barnhart, Erin H. Gillam Dec 2015

Distribution And Occurrence Of Bat Species In North Dakota, Josiah J. Nelson, Paul R. Barnhart, Erin H. Gillam

The Prairie Naturalist

Prior to 2009, a detailed survey of occurrence and distribution of bats in North Dakota had not been conducted. Localized surveys, occurrence reports, and museum specimens provided the only records of bats in the state. Ongoing habitat loss, exploitation of natural resources, and the impending spread of white-nose syndrome to the western United States are major threats to bat populations of the region. The objective of this study was to document presence and distributions of bat species resident in North Dakota. From 2009 to 2012, multiple mist-netting and acoustic surveys were conducted to document species presence across North Dakota. A …


Variability In The Selection Patterns Of Pronghorn: Are They Really Native Prairie Obligates?, Paul F. Jones, Mike Grue, Mike Suitor, Darren J. Bender, Cormack Gates, Dale Eslinger, Julie Landry-Deboer Dec 2015

Variability In The Selection Patterns Of Pronghorn: Are They Really Native Prairie Obligates?, Paul F. Jones, Mike Grue, Mike Suitor, Darren J. Bender, Cormack Gates, Dale Eslinger, Julie Landry-Deboer

The Prairie Naturalist

In Canada, pronghorn (Antilocapra americana) are primarily considered a native prairie obligate because of their reliance on open grassland vegetation communities, although an assessment of local ecological knowledge suggests that pronghorn in Alberta select a variety of habitat from native prairie to cultivated lands. The primary objective of our study was to assess whether pronghorn in Alberta and Saskatchewan are native prairie obligates. Specifically, we addressed the following questions: 1) do individual pronghorn show similar selection patterns for native prairie and, therefore, support the notion that they are prairie obligates; 2) do pronghorn show consistent resource selection patterns …


Book Reviews: Bumble Bees Of North America. Paul H. Williams, Robbin W. Thorp, Leif L. Richardson, And Sheila R. Colla., Samuel O’Dell Dec 2015

Book Reviews: Bumble Bees Of North America. Paul H. Williams, Robbin W. Thorp, Leif L. Richardson, And Sheila R. Colla., Samuel O’Dell

The Prairie Naturalist

Bumblebee identification is generally considered straight- forward, yet mistakes often are made due to the degree of similarity between the color patterns of different species. Bumble Bees of North America aims to improve the accuracy of identifications by both casual observers and professionals through the use of intuitive diagrams, descriptions, and the more technical dichotomous keys. In addition to providing the first complete field guide to North American bumblebees, the authors make efficient use of the reader’s attention by summarizing taxonomic history, favored food plants, and environmental issues concerning bumblebees.

Bumble Bees of North America is organized into three distinct …


Remembering Paul B. Kannowski, Robert Seabloom Dec 2015

Remembering Paul B. Kannowski, Robert Seabloom

The Prairie Naturalist

I am saddened to report that Dr. Paul Kannowski passed away 3 September 2015, succumbing to cancer. He was 88. A native of Grand Forks, Paul attended the University of North Dakota for his B.S. and M.S. degrees, and the University of Michigan for his Ph.D. He joined the University of North Dakota Biology Department in 1957, retiring in 1990 after 33 years of service

Paul chaired UND’s Biology Department twice, totaling 13 years, considered to be a remarkable achievement by many of us who have been exposed to that task! His leadership was instrumental in the nearly exponential growth …


Notes: Woodpecker Forage Availability In Habi- Tat Disturbances Of The Black Hills, Brian E. Dickerson, Angie K. Ambourn, Mark A. Rumble, Kurt K. Allen, Chad P. Lehman Dec 2015

Notes: Woodpecker Forage Availability In Habi- Tat Disturbances Of The Black Hills, Brian E. Dickerson, Angie K. Ambourn, Mark A. Rumble, Kurt K. Allen, Chad P. Lehman

The Prairie Naturalist

Habitat disturbance events are critical to ecological systems in which some bird species have become specialized. The vegetation community, reduced competition, ability to avoid predators, nest-site characteristics, and forage opportunities within a disturbed ecosystem are all aspects that make it desirable for selection by particular species (Svärdson 1949, Cody 1981, Martin 1998). Specifically, avian species rely on the forest conditions created by fire, insects, and disease (Brawn et al. 2001, Hunter et al. 2001, Devictor et al. 2008). In the Black Hills National Forest (BHNF) of South Dakota,two major types of natural disturbances include wildfires and mountain pine beetle (Dendroctonus …


Effect Of Genetic Background On The Dystrophic Phenotype In Mdx Mice., William D Coley, Laurent Bogdanik, Maria Candida Vila, Qing Yu, Terence A Partridge, Kanneboyina Nagaraju, +12 Additional Authors Nov 2015

Effect Of Genetic Background On The Dystrophic Phenotype In Mdx Mice., William D Coley, Laurent Bogdanik, Maria Candida Vila, Qing Yu, Terence A Partridge, Kanneboyina Nagaraju, +12 Additional Authors

Genomics and Precision Medicine Faculty Publications

Genetic background significantly affects phenotype in multiple mouse models of human diseases, including muscular dystrophy. This phenotypic variability is partly attributed to genetic modifiers that regulate the disease process. Studies have demonstrated that introduction of the γ-sarcoglycan null allele onto the DBA/2J background confers a more severe muscular dystrophy phenotype than the original strain, demonstrating the presence of genetic modifier loci in the DBA/2J background. To characterize the phenotype of dystrophin deficiency on the DBA/2J background, we created and phenotyped DBA/2J-congenic Dmdmdx mice (D2-mdx) and compared them to the original, C57BL/10ScSn-Dmdmdx (B10-mdx) model. These strains were compared to their respective …


Sidestream Smoke Exposure Increases The Susceptibility Of Airway Epithelia To Adenoviral Infection, Priyanka Sharma, Abimbola O. Kolawole, Susan B. Core, Adriana E. Kajon, Katherine J.D.A. Excoffon Nov 2015

Sidestream Smoke Exposure Increases The Susceptibility Of Airway Epithelia To Adenoviral Infection, Priyanka Sharma, Abimbola O. Kolawole, Susan B. Core, Adriana E. Kajon, Katherine J.D.A. Excoffon

Biological Sciences Faculty Publications

Background: Although significant epidemiological evidence indicates that cigarette smoke exposure increases the incidence and severity of viral infection, the molecular mechanisms behind the increased susceptibility of the respiratory tract to viral pathogens are unclear. Adenoviruses are non-enveloped DNA viruses and important causative agents of acute respiratory disease. The Coxsackievirus and adenovirus receptor (CAR) is the primary receptor for many adenoviruses. We hypothesized that cigarette smoke exposure increases epithelial susceptibility to adenovirus infection by increasing the abundance of apical CAR. Methodology and Findings: Cultured human airway epithelial cells (CaLu-3) were used as a model to investigate the effect of sidestream cigarette …


Age-Associated Methylation Suppresses Spry1, Leading To A Failure Of Re-Quiescence And Loss Of The Reserve Stem Cell Pool In Elderly Muscle., Anne Bigot, William J Duddy, Zamalou G Ouandaogo, Elisa Negroni, Virginie Mariot, Svetlana Ghimbovschi, Brennan Harmon, Aurore Wielgosik, Camille Loiseau, Joseph Devaney, Julie Dumonceaux, Gillian Butler-Browne, Vincent Mouly, Stéphanie Duguez Nov 2015

Age-Associated Methylation Suppresses Spry1, Leading To A Failure Of Re-Quiescence And Loss Of The Reserve Stem Cell Pool In Elderly Muscle., Anne Bigot, William J Duddy, Zamalou G Ouandaogo, Elisa Negroni, Virginie Mariot, Svetlana Ghimbovschi, Brennan Harmon, Aurore Wielgosik, Camille Loiseau, Joseph Devaney, Julie Dumonceaux, Gillian Butler-Browne, Vincent Mouly, Stéphanie Duguez

Genomics and Precision Medicine Faculty Publications

The molecular mechanisms by which aging affects stem cell number and function are poorly understood. Murine data have implicated cellular senescence in the loss of muscle stem cells with aging. Here, using human cells and by carrying out experiments within a strictly pre-senescent division count, we demonstrate an impaired capacity for stem cell self-renewal in elderly muscle. We link aging to an increased methylation of the SPRY1 gene, a known regulator of muscle stem cell quiescence. Replenishment of the reserve cell pool was modulated experimentally by demethylation or siRNA knockdown of SPRY1. We propose that suppression of SPRY1 by age-associated …


The Potential For A Blood Test For Scabies, Larry G. Arlian, Hermann Feldmeier, Majorie S. Morgan Oct 2015

The Potential For A Blood Test For Scabies, Larry G. Arlian, Hermann Feldmeier, Majorie S. Morgan

Biological Sciences Faculty Publications

Scabies, caused by the mite S. scabiei that burrows in the skin of humans, is a contagious skin disease that affects millions of people worldwide. It is a significant public health burden in economically disadvantaged populations, and outbreaks are common in nursing homes, daycare facilities, schools and workplaces in developed countries. It causes significant morbidity, and in chronic cases, associated bacterial infections can lead to renal and cardiac diseases. Scabies is very difficult to diagnose by the usual skin scrape test, and a presumptive diagnosis is often made based on clinical signs such as rash and itch that can …


Tnf-Α-Induced Micrornas Control Dystrophin Expression In Becker Muscular Dystrophy., Alyson A. Fiorillo, Christopher R. Heier, James S. Novak, Christopher B. Tully, Kristy J. Brown, Kitipong Uaesoontrachoon, Maria C. Vila, Peter P. Ngheim, Luca Bello, Joe N. Kornegay, Corrado Angelini, Terence A. Partridge, Kanneboyina Nagaraju, Eric P. Hoffman Sep 2015

Tnf-Α-Induced Micrornas Control Dystrophin Expression In Becker Muscular Dystrophy., Alyson A. Fiorillo, Christopher R. Heier, James S. Novak, Christopher B. Tully, Kristy J. Brown, Kitipong Uaesoontrachoon, Maria C. Vila, Peter P. Ngheim, Luca Bello, Joe N. Kornegay, Corrado Angelini, Terence A. Partridge, Kanneboyina Nagaraju, Eric P. Hoffman

Genomics and Precision Medicine Faculty Publications

The amount and distribution of dystrophin protein in myofibers and muscle is highly variable in Becker muscular dystrophy and in exon-skipping trials for Duchenne muscular dystrophy. Here, we investigate a molecular basis for this variability. In muscle from Becker patients sharing the same exon 45–47 in-frame deletion, dystrophin levels negatively correlate with microRNAs predicted to target dystrophin. Seven microRNAs inhibit dystrophin expression in vitro, and three are validated in vivo (miR-146b/miR-374a/miR-31). microRNAs are expressed in dystrophic myofibers and increase with age and disease severity. In exon-skipping-treated mdx mice, microRNAs are significantly higher in muscles with low …


Gene Diversification Of An Emerging Pathogen: A Decade Of Mutation In A Novel Fish Viral Hemorrhagic Septicemia (Vhs) Substrain Since Its First Appearance In The Laurentian Great Lakes, Carol A. Stepien, Lindsey R. Pierce, Douglas W. Leaman, Megan D. Niner, Brian S. Shepherd Aug 2015

Gene Diversification Of An Emerging Pathogen: A Decade Of Mutation In A Novel Fish Viral Hemorrhagic Septicemia (Vhs) Substrain Since Its First Appearance In The Laurentian Great Lakes, Carol A. Stepien, Lindsey R. Pierce, Douglas W. Leaman, Megan D. Niner, Brian S. Shepherd

Biological Sciences Faculty Publications

Viral Hemorrhagic Septicemia virus (VHSv) is an RNA rhabdovirus, which causes one of the world's most serious fish diseases, infecting >80 freshwater and marine species across the Northern Hemisphere. A new, novel, and especially virulent substrain—VHSv-IVb—first appeared in the Laurentian Great Lakes about a decade ago, resulting in massive fish kills. It rapidly spread and has genetically diversified. This study analyzes temporal and spatial mutational patterns of VHSv-IVb across the Great Lakes for the novel non-virion (Nv) gene that is unique to this group of novirhabdoviruses, in relation to its glycoprotein (G), phosphoprotein (P), …


Macroecology Of North American Suckers (Catostomidae): Tests Of Bergmann's And Rapoport's Rules, Stephen J. Jacquemin, Jason C. Doll Aug 2015

Macroecology Of North American Suckers (Catostomidae): Tests Of Bergmann's And Rapoport's Rules, Stephen J. Jacquemin, Jason C. Doll

Biological Sciences Faculty Publications

Discerning spatial macroecological patterns in freshwater fishes has broad implications for community assembly, ecosystem dynamics, management, and conservation. This study explores the potential interspecific covariation of geographic range (Rapoport's rule) and body size (Bergmann's rule) with latitude in North American sucker fishes (Cypriniformes: Catostomidae). While numerous tests of Rapoport's and Bergmann's rules are documented in the literature, comparatively few of these studies have specifically tested for these patterns, and none have incorporated information reflecting shared ancestry into analyses of North American freshwater fish through a hierarchical model. This study utilized a hierarchical modeling approach with Bayesian inference to evaluate the …


Bioregulatory Systems Medicine: An Innovative Approach To Integrating The Science Of Molecular Networks, Inflammation, And Systems Biology With The Patient's Autoregulatory Capacity?, Alyssa W Goldman, Yvonne Burmeister, Konstantin Cesnulevicius, Martha Herbert, Mary Kane, David Lescheid, Timothy Mccaffrey, Myron Schultz, Bernd Seilheimer, Alta Smit, Georges St Laurent, Brian Berman Aug 2015

Bioregulatory Systems Medicine: An Innovative Approach To Integrating The Science Of Molecular Networks, Inflammation, And Systems Biology With The Patient's Autoregulatory Capacity?, Alyssa W Goldman, Yvonne Burmeister, Konstantin Cesnulevicius, Martha Herbert, Mary Kane, David Lescheid, Timothy Mccaffrey, Myron Schultz, Bernd Seilheimer, Alta Smit, Georges St Laurent, Brian Berman

Medicine Faculty Publications

Bioregulatory systems medicine (BrSM) is a paradigm that aims to advance current medical practices. The basic scientific and clinical tenets of this approach embrace an interconnected picture of human health, supported largely by recent advances in systems biology and genomics, and focus on the implications of multi-scale interconnectivity for improving therapeutic approaches to disease. This article introduces the formal incorporation of these scientific and clinical elements into a cohesive theoretical model of the BrSM approach. The authors review this integrated body of knowledge and discuss how the emergent conceptual model offers the medical field a new avenue for extending the …


Century-Long Warming Trends In The Upper Water Column Of Lake Tanganyika, Benjamin Kraemer, Simon Hook, Timo Huttula, Pekka Kotilainen, Catherine M. O'Reilly, Anu Peltonen, Pierre-Denis Plisnier, Jouko Sarvala, Rashid Tamatamah, Yvonne Vadeboncoeur, Bernhard Wehrli, Peter B. Mcintyre Jul 2015

Century-Long Warming Trends In The Upper Water Column Of Lake Tanganyika, Benjamin Kraemer, Simon Hook, Timo Huttula, Pekka Kotilainen, Catherine M. O'Reilly, Anu Peltonen, Pierre-Denis Plisnier, Jouko Sarvala, Rashid Tamatamah, Yvonne Vadeboncoeur, Bernhard Wehrli, Peter B. Mcintyre

Biological Sciences Faculty Publications

Lake Tanganyika, the deepest and most voluminous lake in Africa, has warmed over the last century in response to climate change. Separate analyses of surface warming rates estimated from in situ instruments, satellites, and a paleolimnological temperature proxy (TEX86) disagree, leaving uncertainty about the thermal sensitivity of Lake Tanganyika to climate change. Here, we use a comprehensive database of in situ temperature data from the top 100 meters of the water column that span the lake’s seasonal range and lateral extent to demonstrate that long-term temperature trends in Lake Tanganyika depend strongly on depth, season, and latitude. The observed spatiotemporal …


Evaluation Of A Waistband For Attaching External Radiotransmitters To Anurans, Luke Alexander Groff, Amber Pitt, Robert Baldwin, Aram J K Calhoun, Cynthia Loftin Jul 2015

Evaluation Of A Waistband For Attaching External Radiotransmitters To Anurans, Luke Alexander Groff, Amber Pitt, Robert Baldwin, Aram J K Calhoun, Cynthia Loftin

Publications

Radiotelemetry provides fine-scale temporal and spatial information about an individual's movements and habitat use; however, its use for monitoring amphibians has been restricted by transmitter mass and lack of suitable attachment techniques. We describe a novel waistband for attaching external radiotransmitters to anurans and evaluate the percentages of resulting abrasions, lacerations, and shed transmitters. We used radiotelemetry to monitor movements and habitat use of wood frogs (Lithobates sylvaticus) in 2006 and 2011–2013 in Maine, USA; American toads (Anaxyrus americanus) in 2012 in North Carolina, USA; and, wood frogs, southern leopard frogs (L. sphenocephalus), and green frogs (L. clamitans) in 2012 …


Morphometry And Average Temperature Affect Lake Stratification Responses To Climate Change, Benjamin Kraemer, Orlane Anneville, Sudeep Chandra, Margaret Dix, Esko Kuusisto, David M. Livingstone, Alon Rimmer, S. Geoffrey Schladow, Eugene Silow, Lewis M. Sitoki, Rashid Tamatamah, Yvonne Vadeboncoeur, Peter B. Mcintyre Jun 2015

Morphometry And Average Temperature Affect Lake Stratification Responses To Climate Change, Benjamin Kraemer, Orlane Anneville, Sudeep Chandra, Margaret Dix, Esko Kuusisto, David M. Livingstone, Alon Rimmer, S. Geoffrey Schladow, Eugene Silow, Lewis M. Sitoki, Rashid Tamatamah, Yvonne Vadeboncoeur, Peter B. Mcintyre

Biological Sciences Faculty Publications

Climate change is affecting lake stratification with consequences for water quality and the benefits that lakes provide to society. Here we use long-term temperature data (1970–2010) from 26 lakes around the world to show that climate change has altered lake stratification globally and that the magnitudes of lake stratification changes are primarily controlled by lake morphometry (mean depth, surface area, and volume) and mean lake temperature. Deep lakes and lakes with high average temperatures have experienced the largest changes in lake stratification even though their surface temperatures tend to be warming more slowly. These results confirm that the nonlinear relationship …


A Model Of How Different Biology Experts Explain Molecular And Cellular Mechanisms, Caleb M. Trujillo, Trevor R. Anderson, Nancy J. Pelaez Jun 2015

A Model Of How Different Biology Experts Explain Molecular And Cellular Mechanisms, Caleb M. Trujillo, Trevor R. Anderson, Nancy J. Pelaez

PIBERG Publications

Constructing explanations is an essential skill for all science learners. The goal of this project was to model the key components of expert explanation of molecular and cellular mechanisms. As such, we asked: What is an appropriate model of the components of explanation used by biology experts to explain molecular and cellular mechanisms? Do explanations made by experts from different biology subdisciplines at a university support the validity of this model? Guided by the modeling framework of R. S. Justi and J. K. Gilbert, the validity of an initial model was tested by asking seven biologists to explain a molecular …


Food Habits Of Fall-Collected Age-0 Walleyes In Eastern South Dakota Gla- Cial Lakes, Benjamin J. Schall, Matthew J. Phayvanh, Jeffrey D. Grote, Daniel J. Dembkowski, Melissa R. Wuellner Jun 2015

Food Habits Of Fall-Collected Age-0 Walleyes In Eastern South Dakota Gla- Cial Lakes, Benjamin J. Schall, Matthew J. Phayvanh, Jeffrey D. Grote, Daniel J. Dembkowski, Melissa R. Wuellner

The Prairie Naturalist

Food habits of age-0 fishes can influence their growth and survival prior to the first winter (Hoxmeier et al. 2006, Shoup and Wahl 2011). Ontogenetic diet shifts in juvenile piscivorous fishes result in a transition in consumption from zooplankton to macroinvertebrates and eventually fish throughout development (Mittelbach and Persson 1998). Certain food items may be more energetically beneficial to fishes than others as consumption of prey fishes may lead to faster growth rates of predators, decreased overwinter starvation, avoidance of competition, and reduced predation risk (Werner and Gilliam 1984). By the time age-0 walleyes (Sander vitreus) have reached lengths of …


West Nile Virus And Ferruginous Hawks (Buteo Regalis) In The Northern Great Plains, Shubham Datta, Jonathan A. Jenks, David E. Knudsen, Kent C. Jensen, Will M. Inselman, Christopher C. Swanson, Troy W. Grovenburg Jun 2015

West Nile Virus And Ferruginous Hawks (Buteo Regalis) In The Northern Great Plains, Shubham Datta, Jonathan A. Jenks, David E. Knudsen, Kent C. Jensen, Will M. Inselman, Christopher C. Swanson, Troy W. Grovenburg

The Prairie Naturalist

Emerging infectious diseases (EID) present significant threats to the conservation of global biodiversity (Daszak et al. 2000). Evaluating impacts (spatial, temporal and demographic) of EIDs on sensitive and declining wildlife populations is challenging because quantitative information is usually dependent on estimates rather than counts (Wobeser 2007) and mortality rates are seldom quantified with conventional monitoring (Naugle et al. 2005).

West Nile virus (WNv), a mosquito-borne Flavivirus (family Flaviviridae; Komar 2001), was discovered in northwest Uganda in 1937 (Smithburn et al. 1940). First encountered in the western hemisphere in New York in 1999 (Nash et al. 2001), WNv has become enzootic …


Habitat-Related Differences In Necroph- Ilous Species Composition: Implications For Resource Competition, Adrienne L. Conley, Elisabeth K. Jorde, Rachel E. Jorde, Lauren K. Yares, Kenzie K. Lee, Carrie L. Hall, Daniel R. Howard Jun 2015

Habitat-Related Differences In Necroph- Ilous Species Composition: Implications For Resource Competition, Adrienne L. Conley, Elisabeth K. Jorde, Rachel E. Jorde, Lauren K. Yares, Kenzie K. Lee, Carrie L. Hall, Daniel R. Howard

The Prairie Naturalist

Competition for resources is one of the most important selective factors influencing the expression of life history traits in both plants and animals (Darwin 1859). In grasslands, competition for resources such as nutrients, water, and space often is constrained by stochastic processes (Axelrod 1985). Disturbance factors such as fire, grazing by large herbivores, and fluctuating climatic conditions tend to alter the structure and magnitude of competition for limited resources among grassland communities more frequently than in other ecosystems (Snaydon 1987, van der Maarel 1993). Vertebrate carrion is one important resource used by both plants and animals in grasslands, providing a …


Comparison Of Two Trap Net Designs For Sampling Muskellunge, Brian G. Blackwell, Todd M. Kaufman, Tyrel S. Moos, David O. Lucchesi Jun 2015

Comparison Of Two Trap Net Designs For Sampling Muskellunge, Brian G. Blackwell, Todd M. Kaufman, Tyrel S. Moos, David O. Lucchesi

The Prairie Naturalist

Sampling adequate numbers of muskellunge (Esox masquinongy) is necessary to evaluate stocking success and to collect information on various population metrics (e.g., growth, condition, relative abundance). However, muskellunge are often difficult to sample with standard fish sampling gears. We collected muskellunge in trap nets of two different designs (large trap nets [1.5-m × 1.8-m frames, 1.5-m diameter hoops, double throated, single 1.5-m × 30.5-m lead and 19-mm knotless mesh] and small trap nets [0.9-m × 1.5-m frames, 0.9-m diameter hoops, single throat, single 0.9-m × 15.2-m lead and 19-mm knotted mesh]. We also estimated abundance of muskellunge (>600 mm …


Notes: Are Land-Use Changes Reflected In Diets Of Mourning Doves (Zenaida Macroura) In Eastern South Dakota, Joshua B. Smith, Troy W. Grovenburg, Matthew A. Perrion, Jason M. Augspurger, Trevor W. Bultje, Anna M. Robinson, Brandi L. Crider, Datta Shubham, Jonathan A. Jenks Jun 2015

Notes: Are Land-Use Changes Reflected In Diets Of Mourning Doves (Zenaida Macroura) In Eastern South Dakota, Joshua B. Smith, Troy W. Grovenburg, Matthew A. Perrion, Jason M. Augspurger, Trevor W. Bultje, Anna M. Robinson, Brandi L. Crider, Datta Shubham, Jonathan A. Jenks

The Prairie Naturalist

Food habits of the mourning dove (Zenaida macroura) have been extensively studied in the southern United States (McClure 1943, Korschgen 1958, Carpenter 1971) and consist primarily of vegetable matter throughout their range (Beckwith 1959). Diet studies in several states have indicated agricultural crops, specifically corn and wheat, were the most readily consumed plant seeds (Korshgen 1958, Carpenter 1971). Similarities observed in diets of doves were dependent on the agricultural crops available within the area. For example, in Missouri, some seasonal variability was documented suggesting doves forage based on food availability as much as by food preference (Korschgen 1958). However, in …