Horticulture Commons^™

Shinyfruit: Interactive Fruit Phenotyping Software And Its Application In Blackberry, T. Mason Chizk, Jackie A. Lee, John R. Clark, Margaret L. Worthington

Horticulture Faculty Publications and Presentations

Introduction: Horticultural plant breeding programs often demand large volumes of phenotypic data to capture visual variation in quality of harvested products. Increasing the throughput potential of phenomic pipelines enables breeders to consider data-hungry molecular breeding strategies such as genome-wide association studies and genomic selection.

Methods: We present an R-based web application called ShinyFruit for image-based phenotyping of size, shape, and color-related qualities in fruits and vegetables. Here, we have demonstrated one potential application for ShinyFruit by comparing its estimates of fruit length, width, and red drupelet reversion (RDR) with ImageJ and analogous manual phenotyping techniques in a population of blackberry …

Genetic Architecture Of Salt Tolerance In Cowpea (Vigna Unguiculata (L.) Walp.) At Seedling Stage Using A Whole Genome Resequencing Approach, Waltram Ravelombola, Lindgi Dong, Thomas Casey Barickman, Haizheng Xiong, Aurora Manley, John Cason, Hanh Pham, Bazgha Zia, Beiquan Mou, Ainong Shi

Horticulture Faculty Publications and Presentations

Cowpea (Vigna unguiculata (L.) Walp.) is a diploid legume crop used for human consumption, feed for livestock, and cover crops. Earlier reports have shown that salinity has been a growing threat to cowpea cultivation. The objectives of this study were to conduct a genome-wide association study (GWAS) to identify SNP markers and to investigate candidate genes for salt tolerance in cowpea. A total of 331 cowpea genotypes were evaluated for salt tolerance by supplying a solution of 200 mM NaCl in our previous work. The cowpea panel was genotyped using a whole genome resequencing approach, generating 14,465,516 SNPs. Moreover, …

Genome-Wide Association Study And Genomic Prediction Of Fusarium Wilt Resistance In Common Bean Core Collection, Kenani Chiwina, Haizheng Xiong, Gehendra Bhattarai, Ryan Dickson, Theresa Makawa Phiri, Yilin Chen, Ibtisam Alatawi, Derek Dean, Neelendra K. Joshi, Yuyan Chen, Awais Riaz, Paul Gepts, Mark Brick, Patrick Byrne, Howard Schwartz, James B. Ogg, Kristen Otto, Amy Fall, Jeremy Gilbert, Ainong Shi

Horticulture Faculty Publications and Presentations

The common bean (Phaseolus vulgaris L.) is a globally cultivated leguminous crop. Fusarium wilt (FW), caused by Fusarium oxysporum f. sp. phaseoli (Fop), is a significant disease leading to substantial yield loss in common beans. Disease-resistant cultivars are recommended to counteract this. The objective of this investigation was to identify single nucleotide polymorphism (SNP) markers associated with FW resistance and to pinpoint potential resistant common bean accessions within a core collection, utilizing a panel of 157 accessions through the Genome-wide association study (GWAS) approach with TASSEL 5 and GAPIT 3. Phenotypes for Fop race 1 and race …

Arkansas Wheat Performance Tests 2022-2023, J. F. Carlin, R. B. Mulloy, R. D. Bond

Arkansas Agricultural Experiment Station Research Series

Wheat variety performance tests are conducted each year in Arkansas by the University of Arkansas System Division of Agriculture’s Arkansas Crop Variety Improvement Program.

The tests provide information to companies developing cultivars and marketing seed within the state and aid the Arkansas Cooperative Extension Service in formulating variety recommendations for small-grain producers. The tests were conducted at the Northeast Research and Extension Center at Keiser, the Vegetable Substation near Kibler, the Lon Mann Cotton Research Station near Marianna, the Pine Tree Research Station near Colt, and the Rohwer Research Station near Rohwer. Specific location and cultural practice information accompany each …

Did Cover Crop Or Animal Manure Ameliorate Corn Residue Removal Effects On Soil Mechanical Properties After 10 Years?, Hans W. Klopp, Humberto Blanco-Canqui, Michael Sindelar, Virginia L. Jin, Marty R. Schmer, Richard B. Ferguson

Department of Agronomy and Horticulture: Faculty Publications

Crop residue removal may negatively affect soil mechanical properties, which are key components of soil quality. To evaluate potential long-term effects, we assessed the 10-yr impact of corn (Zea mays L.) residue removal (59 % of non-grain biomass annually) on surface soil mechanical properties (0–20 cm). We also evaluated whether adding carbon (C) amendments, such as using a winter rye (Secale cereale L.) cover crop or surface-applying cattle manure (24 Mg ha− 1 biannually) can ameliorate the effects of crop residue removal. This long-term study was under irrigated no-till continuous corn on a silt loam soil in south-central …

Cercocarpus Ledifolius Var. Intricatus ‘Doubledown’, Asmita Paudel, Youping Sun, Larry A. Rupp

Plants, Soils, and Climate Faculty Publications

Bonsai (tray landscape, potted scenery, potted landscape, miniature trees, and rockery) is an artistic horticulture practice of developing aesthetically formed trees and landscapes in miniature with appropriately aesthetic containers. This has been practiced over a few thousand years in oriental cultures, including the ancient Chinese tradition of penzai or penjing, from which the art originated; the miniature living landscapes of Vietnamese hòn non bộ; and the Japanese variations of bonsai and “tray planting” (Gustafson 1995). To produce bonsai plants that share similar shapes and styles of mature, full-size trees, cultivation techniques are used, including leaf trimming, …

Evapotranspiration And Precipitation Data For Calculating Irrigation Requirements In Utah, Shital Poudyal, Anju Chaudhary

All Current Publications

Reference evapotranspiration (ETo) and precipitation data are essential for developing water budgets and calculating irrigation water requirements. However, it is crucial that the data used for such purposes are recent and easily accessible to stakeholders. In this fact sheet, we calculated average reference evapotranspiration and precipitation data for multiple locations in Utah, USA. To accomplish this, we collected the data from the Utah Climate Center and compiled it to show an average of 20 years of data by month in an easily digestible format. We compiled data for 69 locations in Utah, making it easy to find one close to …

Is Climate Change Causing The Range Contraction Of Cape Rock-Jumpers (Chaetops Frenatus)?, Gregory D. Duckworth, Raquel A. Garcia, Rheinhardt Scholtz, Res Altwegg

Department of Agronomy and Horticulture: Faculty Publications

Species distribution models often suggest strong links between climate and species' distribution boundaries and project large distribution shifts in response to climate change. However, attributing distribution shifts to climate change requires more than correlative models. One idea is to examine correlates of the processes that cause distribution shifts, namely colonization and local extinction, by using dynamic occupancy models. The Cape Rock-jumper (Chaetops frenatus) has disappeared over most of its distribution where temperatures are the highest. We used dynamic occupancy models to analyse Cape Rock-jumper distribution with respect to climate (mean temperature and precipitation over the warmest annual quarter), …

Allelopathy Of Faba Bean Cover Crop To Durum Wheat Under A Semi-Arid Environment, Oussama Oueslati, Arwa Zammali, Raed Hamdi, Ahlem Dhahri, Chaima Melliti, Moncef Ben Hammouda, Robert Kremer

The Philippine Agricultural Scientist

Problems facing farmers practicing conservation agriculture in the semi-arid zone of Tunisia include appropriate cover crop selection, management of allelopathic effects affecting subsequent crop performance, and influence of seasonal variation on allelopathy expression. Allelopathy expressed by faba bean (Vicia faba L.) toward durum wheat [Triticum turgidum ssp. durum (Desf.) Husn.] was studied using bioassays during three growing seasons. The role of phenols in the expression of such potential was also investigated. Analyses of plant samples at three phenological stages (flowering, fruiting, senescence) revealed that leaves were most inhibitory. Allelopathic potential differed among plant components and phenological stages, with …

Summaries Of Arkansas Cotton Research 2022, Fred Bourland

Arkansas Agricultural Experiment Station Research Series

The current economic environment continues to drive the need to produce record or near-record yields to be profitable. Price volatility in 2022 added another level of difficulty in the quest for being profitable. The cotton market saw significant movement after reaching a $1.5802 per pound high in May 2022, cotton prices corrected and more than halved in value at the October 2022 low, and then consolidated around the 80 cents per pound level in December 2022 (Cotton is Consolidating). Great uncertainties still exist for the upcoming season, most of which are outside of our control. These include, but are not …

Determining Cardinal Temperatures For Eight Cover Crop Species, Mila V. Pessotto, Trenton Roberts, Matthew B. Bertucci, Caio Dos Santos, Jeremy Ross, Mary C. Savin

Horticulture Faculty Publications and Presentations

Growing degree days (GDD) is a tool to predict plant growth and can be adapted for use in any plant species, including cover crops. A limitation of the GDD calculation is accurate temperature parameters used to predict plant development. For most cover crop species, the cardinal temperatures are not well defined in the literature, leading to a less accurate calculation of GDD. The objective of this study was to determine the cardinal temperatures of eight cover crop species, including Austrian winter pea (Pisum sativum), balansa clover (Trifolium michelianum), barley (Hordeum vulgare), black-seeded oats ( …

Dicamba Off-Target Movement From Applications On Soybeans At Two Growth Stages, Greg R. Kruger, Guilherme S. Alves, Kasey Schroeder, Jeffrey A. Golus, Daniel B. Reynolds, Darrin M. Dodds, Ashli E. Brown, Bradley K. Fritz, Wesley C. Hoffmann

Department of Agronomy and Horticulture: Faculty Publications

The objective of this study was to evaluate dicamba off-target movement during and after applications over soybean at two growth stages. Dicamba-tolerant soybean [Glycine max (L.) Merr.] at V3 and R1 growth stages in Nebraska and Mississippi fields were treated with diglycolamine salt of dicamba (560 g ae ha⁻¹), potassium salt of glyphosate (1260 g ae ha⁻¹), and a drift-reducing adjuvant (0.5% v v⁻¹). Filter papers positioned outside the sprayed area were used to determine primary movement and air samplers positioned at the center of sprayed area were used to calculate dicamba flux …

Asparagus (Asparagus Officinalis L.) Root Distribution: Cultivar Differences In Mature Plantings, Daniel Drost

Plants, Soils, and Climate Faculty Publications

Annual plant growth patterns and seasonal conditions have both been shown to influence asparagus (Asparagus officinalis L.) root development over time. Root biomass and distribution changes in mature asparagus cultivars are herein illustrated and described. Asparagus root length density and biomass were estimated from soil cores using a systematic field sampling approach each spring. Soil cores (0.9 m deep) were divided into 0.15 m lengths and fleshy roots collected from the soil. Root length density and dry weights were determined and root distribution maps generated from collected data. As asparagus plantings matured, the sampling year had a significant influence …

A Follow-Up Survey To Assess Stakeholders’ Perspectives On Weed Management Challenges And Current Practices In Nebraska, Usa, Shawn T. Mcdonald, Debalin Sarangi, Jennifer M. Rees, Amit J. Jhala

Department of Agronomy and Horticulture: Faculty Publications

Stakeholders across the state of Nebraska, USA, were surveyed in 2019–2020 to assess problem weeds and weed management practices in agronomic crops. A total of 420 complete responses were obtained across four Nebraska districts (Northeast, Panhandle, Southeast, and West Central). Accumulated across the state, 65.5% of farmed or scouted crop ground in Nebraska was under no-till production, with the major crops being corn and soybean representing 39.3% and 30.7% of agronomic crop production area, respectively. Palmer amaranth, horseweed, waterhemp, kochia, and giant ragweed were ranked the most problematic weeds. In a 2014–2015 survey, Palmer amaranth was the sixth most problematic …

The Evolving Definition Of Plant Cell Type, Sahand Amini, Jeffrey J. Doyle, Marc Libault

Department of Agronomy and Horticulture: Faculty Publications

In 1665 Robert Hooke, looking at cork through his microscope, discovered that plants are composed of elementary structures he named “cells”. Variation in the expression of a single genome in a complex eukaryotic organism guides the initiation, maturation, physiology, and biochemistry of cells with different shapes and sizes, playing different structural and functional roles in space and time. How many kinds of cells—”cell types”— an organism possesses of course depends on the organism’s cellular complexity, but the plasticity within a cell type fuels the emergence of the concept of cell state (Figure 1). The transition between cell states is driven …

Shortening Harvest Interval, Reaping Benefits? A Study On Harvest Practices In Oil Palm Smallholder Farming Systems In Indonesia, Rosanne E. De Vos, Lisa Nurfalah, Fatima A. Tenorio, Ya Li Lim, Juan Pablo Monzon, Christopher R. Donough, Hendra Sugianto, Asri A. Dwiyahreni, Nurul L. Winarni, Nadia Mulani, Gilang Ramadhan, Muhammad Ali Imran, Antonius P. Tito, Pandu Sulistiawan, Muhammad Khoirul, Rana Farrasati, Iput Pradiko, Patricio Grassini, Maja Slingerland

Department of Agronomy and Horticulture: Faculty Publications

CONTEXT: Smallholders are responsible for a large share of global palm oil production. Yet, in Indonesia, the main palm oil producing country, smallholders’ yields remain low. Better management practices, including short harvest interval (HI, the number of days between two harvest rounds), could help to raise smallholder yields. However, at present, HI is long in smallholder fields and the drivers underlying this phenomenon are poorly understood.

OBJECTIVE: We explored agronomic, socio-economic, and institutional factors that underlie harvesting practices in independent oil palm smallholder farming systems in Indonesia to assess scope for sustainable intensification through shorter HI and reduced …

Exotic Herbivores And Fire Energy Drive Standing Herbaceous Biomass But Do Not Alter Compositional Patterns In A Semiarid Savanna Ecosystem, Virginia D. Preiss, Carissa L. Wonkka, Devan A. Mcgranahan, Alexandra G. Lodge, Matthew B. Dickinson, Kathleen L. Kavanagh, Heath D. Starns, Douglas R. Tolleson, Morgan L. Treadwell, Dirac L. Twidwell Jr, William E. Rogers

Department of Agronomy and Horticulture: Faculty Publications

Questions: Fire regime alterations are pushing open ecosystems worldwide past tipping points where alternative steady states characterized by woody dominance prevail. This reduces the frequency and intensity of surface fires, further limiting their effectiveness for controlling cover of woody plants. In addition, grazing pressure (exotic or native grazers) can reinforce woody encroachment by potentially reducing fine-fuel loads. We investigated the effects of different fire energies on the herbaceous plant community, together with mammalian wildlife herbivory (exotic and native combined) exclusion, to inform best management practices.

Location: Texas semi-arid savanna, southern Great Plains, USA.

Methods: We conducted an …

Black Experiences With Community Gardening In Southeast Louisiana, Kiarah Craft

LSU Master's Theses

Community gardens have been rising in popularity over the past few years (Mayers, 2023). In response to the COVID-19 pandemic, many people across the United States have decided that it is crucial to grow their own food and develop sustainability within their community. Historically, Black communities have been underserved and ignored, especially in relation to food security and community safety (White, 2019, Penniman, 2018). The purpose of this study was to collect information about the effects of community-based gardening programs on Black people in Southeast Louisiana. Additionally, the researcher would like to gain knowledge regarding the reasons that Black people …

Targeted Sequencing Of The Panicum Miliaceum Gene Space And Genotyping Of Variant Sites From Population Genetics Studies, Combined In A Single Assay, As A Tool For Broomcorn Millet Assisted Breeding, Gabriele Magris, Serena Foria, Silvano Ciani, Dipak K. Santra, Ombretta Polenghi, Virna Cerne, Michele Morgante, Gabriele Di Gaspero

Department of Agronomy and Horticulture: Faculty Publications

Broomcorn millet (Panicum miliaceum L.) is a prehistorical cereal, today cultivated as a minor crop with low yields but with a renewed interest for its high water use effciency and gluten-free grains. To reverse the downward trend in broomcorn millet cultivation, the crop needs genetic improvement and creation of novel genetic variation to increase productivity. In order to facilitate genomics-assisted breeding, we designed a reduced representation genome-sequencing assay that investigates 1.8% of the nuclear DNA in a targeted and reproducible way, with an intensity of genomic sampling that is a direct function of local recombination rate. We used this …

Indigenous Lakadong Turmeric Of Meghalaya And Its Future Prospects, Manjit Kumar Ray, Dipak K. Santra, Piyush Kumar Mishra, Saurav Das

Department of Agronomy and Horticulture: Faculty Publications

Turmeric (Curcuma longa) has long been used in traditional Indian medicine. India accounts for 80% of total global turmeric production. Lakadong turmeric gets its name from the tiny village of Lakadong, which is located in the foothills of the Jaintia Hills in Meghalaya, India. It is known for having a high curcumin content of more than 7%, as opposed to 2 - 4% in regular varieties. The tribes of this region brought Lakadong turmeric from the forest and domesticated it for medicinal purposes centuries ago. Growth in local coal industries and a gradual decline in the market have …

Effect Of Cutting Management On The Forage Production And Quality Of Tepary Bean (Phaseolus Acutifolius A. Gray), Travis W. Witt, Brian K. Northup, Timothy G. Porch, Santos Barrera, Carlos A. Urrea

Department of Agronomy and Horticulture: Faculty Publications

Tepary bean (Phaseolus acutifolius A. Gray) is an underutilized drought tolerant annual legume, originating from the Sonoran Desert, that may be a beneficial forage/hay for beef cattle in the Southern Great Plains of the US (SGP). The SGP has erratic rainfall and periods of intermittent drought exacerbated by high summer temperatures. In 2020 and 2021, a split-plot design was used to evaluate 13 genotypes of tepary bean and a forage soybean (control) at El Reno, OK, USA to compare production of plant biomass and forage nutritive value parameters under seven harvest regimes. Genotypes were used as the main plot …

Soil Health As Influenced By The Integration Of Cover Crops And Poultry Litter In North-Central Mississippi, Nikitha Reddy Kovvuri

Theses and Dissertations

Soil health-based agricultural management practices are widely promoted to improve soil structure, infiltration and reduce erosion. This study was conducted at two locations in North-Central Mississippi to evaluate the influence of different cover crop species and poultry litter on soil health that can impact crop production, climate change, and resilience. The results indicated that the cover crops showed a little effect on some soil health indicators compared to control treatment. However, in one location, rye, and a mixture of cover crops decreased bulk density and increased available water content and organic matter. The poultry litter had a positive effect on …

Response Of Lettuce (Lactuca Sativa L.) To Salt Stress, Bikash Adhikari

Theses and Dissertations

Lettuce is a highly nutritional crop that is sensitive to multiple stresses, including salt stress. The decreasing availability of salt-free water is posing a major challenge to growing nutritious lettuce in hydroponic systems. Despite evidence that salt stress affects yield and nutrition, its impacts on economically important growth stages are overlooked. This study addressed the knowledge gaps regarding the salt stress impact on romaine lettuce. Four independent experiments were conducted in controlled environment conditions using 2-38 lettuce genotypes, to assess the effects of salt stress at rosette or head formation. An increase in sodium chloride (NaCl) levels (0 to 150 …

Impacts Of Cover Crop, Soil Steaming, And Plastic Mulch On Field-Grown Tomato Production And Virus-Induced Gene Silencing In Antirrhinum, Penstemon, Petunia, Rosa, And Rudbeckia, Brenton Andrew Earl Breland

Theses and Dissertations

Weeds and soil-borne diseases can cause large yield losses in field-grown tomato (Solanum lycopersicum) production. Techniques have been developed to reduce soil-based problems. In this study, we evaluated the impacts of cover crops, soil steaming, and plastic mulch to reduce weed and disease pressure in field-grown tomatoes. Four cover crop treatments were grown in the fall and winter before spring planting. Soils were steamed to a target temperature of 71.1 °C for 0, 5, or 20 minutes. Plastic mulch was also used on half of the rows. Yield, weed densities, and disease incidence were recorded.

Reduced flowering time …

Nebline, August/September 2023

NEBLINE Newsletter Archive from Nebraska Extension in Lancaster County

Understanding the “WHY” of Challenging Behavior in Young Children Can Help With Strategies by Hayley Jackson

5 Reasons to Support Your Farmers Market by Tara Dunker

Recipes of the Month: Chocolate Zucchini Muffins and Fresh Salsa by Kayla Colgrove

Time for Fall Lawn Seeding by Sarah Browning

Garden Guide: Things to Do This Month

Using Water Resources More Efficiently by Becky Schuerman

Parasitoids: Nature’s Biocontrol by Kait Chapman

Lancaster County Super Fair, Aug. 3-12, 2023

Webinars Addressing Biting Pests in Early Childhood and School Settings

Ag Landlord/Tenant Workshop

4-H Announcements for 4-H'ers or 4-H Volunteers

Heart of 4-H Volunteer Award: …

Lunchbox Hydroponics, Stacy A. Adams

Department of Agronomy and Horticulture: Faculty Publications

Growing plants with hydroponics is less complicated than it may appear when the fundamentals of the system are understood. This publication provides instruction on the construction of a simple hydroponic prototype suitable for school or youth education programs. The fundamentals of hydroponics, basic design of a solution system, seed starting, creating a nutrient solution, and plant care are explored through this engaging project. This prototype can successfully be used to grow small edible and herb plants in the classroom or at home.

Salinity In Propagation: Germination And Juvenile Acclimatization Of Wetland Halophytes Using Saline Irrigation, Morgan Tomlin

All Theses

The introduction of poor water quality into commercial nursery crop production is predicated on optimized methods that apply saline irrigation without compromising plant success and health. Halophytes have many mechanisms of salt tolerance; however, these are greatly tied to physiological and developmental maturity. Thus, evaluating salt tolerance of halophytic crops (Hibiscus moscheutos and Kosteletzkya virginica) during seed germination and juvenile phases of life may provide insight into the efficacy of integrating poor quality water in horticultural operations.

Four seed priming methods (hydropriming, proline priming, low concentration halopriming, and high concentration halopriming) were evaluated as pre-sowing techniques to ameliorate …

Evaluating The Effect Of Biochar Soil Amendments On Belonolaimus Longicaudatus Populations Damaging Bermudagrass In South Carolina, Malone Thomason

All Theses

Belonolaimus longicaudatus Rau, (1958) (sting nematode) is a prevalent plant-parasitic nematode found in association with Cynodon spp. (bermudagrass) in South Carolina (Ye et al., 2012). Due to the persistence of the pest, long-term management strategies are necessary. Applications of biochar and compost amendments have reduced nematodes in various crop systems, but research on turfgrass systems is limited. The objectives of the studies were to determine: (1) The effect of topdressing or soil incorporated biochar amendments on sting nematode populations, and (2) The effect of topdressing or soil incorporated amendments on turf quality. A field study was established to examine topdressings …

Screening A Set Of Tomato Genotypes For Resistance To Bacterial Wilt And A Genomic Wide Association Study And Genomic Prediction For Yield-Related Traits In ‘Lcp 85-384’. I. Sugarcane, Theresa Makawa Phiri

Graduate Theses and Dissertations

This thesis comprises two studies that focused on screening tomato genotypes for bacterial wilt resistance and a genome-wide association study and genomic prediction for yield-related traits in sugarcane with the aim of contributing to the breeding programs. In the first chapter, 40 tomato accessions from the USDA collection were evaluated for their resistance to Ralstonia solanacearum isolate P822 under controlled greenhouse conditions. The plants were inoculated, and disease symptoms were visually assessed. Disease severity was rated on a scale of 0 to 4, where 0 represented no wilting and 4 indicated complete leaf wilting. Among the tested accessions, five (PI …

Evaluation Of Biochar Rate And Hemp Cultivar For The Phytoremediation Of Heavy-Metal-Contaminated Soil From The Tar Creek Superfund Site, Dietrich Thurston

Graduate Theses and Dissertations

Soil contamination by cadmium (Cd), lead (Pb), and zinc (Zn) at the Tar Creek Superfund site in Northeast Oklahoma remains a threat to the environment and local ecosystem. Phytoremediation by industrial hemp (Cannabis sativa L.) and the use of biochar (BC) have been independently shown to be effective methods to remediate heavy-metal-contaminated soils. The objective of this greenhouse study was to evaluate the effects of industrial hemp cultivar (‘Carmagnola’ and ‘Jinma’), BC rate (0, 2, 5, and 10% by volume), soil contamination level (low, medium, and high), and their interactions on above- and belowground (AG and BG, respectively) plant dry …