Botany Commons^™

Usefulness Of Palynomorphological Characteristics For The Identification Of Speciescyanus Mill. (Asteraceae) In Turkey: A Taxonomic Approach, Burcu Yilmaz Çitak, Emrah Şi̇ri̇n, Hüseyi̇n Dural, Kuddi̇si̇ Ertuğrul

Turkish Journal of Botany

Palynological characters of 20 taxa belonging to the Turkish subgenus Cyanus were studied in details using light and scanning electron microscopy. Pollen grains of the subgenus Cyanus were tricolporate or syncolporate, subprolate or prolate-spheroidal, 26.15 to 53 µm in polar size, 22.84 to 46.86 µm in equatorial size, isopolar, and radially symmetrical. The only type of pollen grain ornamentation observed was scabrate-perforate. Principal component analysis and cluster analysis were performed to investigate the relationships of the studied Cyanus taxa. As a result of the phenetic analyses, the polar axis, equatorial axis, colpus length, and apocolpium were found to be significant …

Achene Morphology Of The Genus Cota J.Gay (Asteraceae)From Turkey And Its Taxonomic Significance, Mehmet Ufuk Özbek, Funda Özbek, Meci̇t Vural

Turkish Journal of Botany

Twenty-two taxa of the genus Cota J.Gay (Asteraceae) from Turkey were examined with a stereomicroscope and scanning electron microscope (SEM) in order to describe their achene macro- and micromorphologies and to evaluate the diagnostic value of these features. The achenes are obpyramidal, obconical, and oblong. Achene width ranges from 0.26 to 1.68 mm and achene length from 1.13 to 3.46 mm. They show variation in color: brown, dark brown, grayish-brown, reddish-brown, purplish-brown, black, and purplish. All investigated species have slime cells, but prismatic cells on epicarpic cells are found only in two species. Four types of ornamentations were recognized via …

Phylogenetics Of The Borage Family: Delimiting Boraginales And Assessing Closest Relatives, Kristen E. Hasenstab-Lehman

Aliso: A Journal of Systematic and Floristic Botany

The placement of Boraginales, and relationships within the family have remained elusive in modern, broad phylogenetic studies. In order to assess the phylogeny of Boraginales, and specifically to test the sister lineage of the order, a data matrix of the chloroplast markers rbcL, ndhF, and trnL-trnF was assembled from GenBank and de novo sequences (representing 132 new GenBank accessions). Phylogenies inferred using Maximum Likelihood and Bayesian frameworks resulted in identical topologies. Tests for alternative topologies were used to assess whether any of the candidates for sister (Solanales, Gentianales, Lamiales, or Vahlia) to Boraginales could …

Mapping And Analyzing The Spatial Distribution Of Thetribe Triticeae Dumort. (Poaceae) In Turkey, Hakan Mete Doğan, Evren Cabi̇, Musa Doğan

Turkish Journal of Botany

Triticeae Dumort. (Poaceae), or true grasses, the fifth-largest plant family in the world, are of great importance in terms of human life and civilization. Therefore, understanding the spatial distribution of the family members is important for botanists, plant producers, and breeders. Turkey is one of two gene centers of this family. In this study, the spatial distribution of Triticeae in Turkey was mapped in geographic information systems (GIS) by utilizing a large number of specimens collected from 1006 georeferenced sampling sites between 2004 and 2010. Canonical correspondence analysis (CCA) was carried out in order to understand the spatial distribution of …

Astragalus Unalii (Fabaceae), A New Species From Turkey, Ömer Çeçen, Zeki̇ Aytaç, Hüseyi̇n Misirdali

Turkish Journal of Botany

Astragalus unalii Çeçen, Aytaç and Mısırdalı, sp. Nov. (Fabaceae, sect. Malacothrix Bunge) is described as a new species from Karadağ (Karaman Province) in southern Anatolia and compared with its relatives growing in steppe vegetation. The new species is close to A. Tauricola Boiss. And A. Adiyamanensis Podlech and M.Ekici, endemic and growing in central and southern parts of Anatolia, Turkey. Taxonomic descriptions, pollen and seed characters, and geographical distribution of the new species are presented.

New Species And A Synonym Of The Genus Hesperis (Brassicaceae) From Turkey, Ahmet Duran, Özlem Çeti̇n

Turkish Journal of Botany

Hesperis tosyaensis A.Duran, a new species from northern Anatolia, is described and illustrated. It grows under open Quercus forest. The new species is distinct from the closely allied H. Ozcelikii A.Duran by the following features: stem erect, 45-90 cm tall, hispid, hairs 2-2.5 mm, and fruit glabrous. Genetic differentiation between closely related Hesperis L. Taxa and Matthiola W.T.Aiton was examined by molecular analyses of the ISSR. The chromosome number for Hesperis tosyaensis is 2n = 14. Information is also presented on its ecology and conservation status. In addition, Hesperis aspera E.Fourn. İs treated as a synonym of Hesperis bicuspidata (Willd.) …

A Conspectus Of Scorzonera S.L. In Turkey, Kami̇l Çoşkunçelebi̇, Serdar Makbul, Mutlu Gültepe, Seda Okur, Murat Erdem Güzel

Turkish Journal of Botany

A comprehensive taxonomic study based on comparative morphology of Scorzonera, here maintained in its wide sense, is presented for the territory of Turkey. This study has produced several changes of classification at sectional and species ranks. An updated list of Scorzonera taxa occurring in Turkey, along with their infrageneric classification, is provided. A new section, S. sect. Anatolia Makbul & Coskunç., is described. Chromosome numbers, threat categories, and distribution maps are given for 6 endemic taxa (S. boissieri, S. karabelensis, S. longiana, S. sandrasica, S. ulrichii, and S. zorkunensis) placed in or transferred to the newly described section. A revised …

Phylogeny, Geographic Distribution, And New Taxonomic Circumscription Of The Crocus Reticulatus Species Group (Iridaceae), Dörte Harpke, Lorenzo Peruzzi, Helmut Kerndorff, Theophanis Karamplianis, Theophanis Constantinidis, Vladimir Randelovic, Novica Randelovic, Marina Juskovic, Erich Pasche, Frank R. Blattner

Turkish Journal of Botany

Recent phylogenetic analyses proved several infrageneric units within the genus Crocus to be para- or polyphyletic. In an attempt to arrive at a system of Crocus that closely reflects species relationships, we provide here phylogenetic, morphometric, geographic, and nomenclatorial data for the species of a narrower-defined, monophyletic Crocus series Reticulati. We sequenced the ETS and ITS regions of the nuclear ribosomal DNA in 9 Reticulati and 19 outgroup species. Three chloroplast loci (trnL-F, rps16-trnQ, matK-trnK) were sequenced in the newly defined series Reticulati species and 1 outgroup. Data were analyzed with Bayesian and parsimony algorithms. The phylogenies resulted in 2 …

Species Status Of Sclerocactus Brevispinus, S. Wetlandicus, And S. Glaucus: Inferences From Morphology, Chloroplast Dna Sequences, And Aflp Markers, J. Mark Porter, Jennifer Cruse-Sanders, Linda Prince, Robert Lauri

Aliso: A Journal of Systematic and Floristic Botany

We examine patterns of variation in 12 continuous morphological traits, chloroplast DNA sequences from 10 intergenic spacer regions (petA-psbJ, psbk-trnS, psbM-trnD, rpob-trnC, trnC-trnD, trnGCU-trnG2S, trnFM-trnUGA, atpF-atpH, trnT-trnD, trnQ-psbk), atpF, and rpl16, and Amplified Fragment Length Polymorphism (AFLP) genetic markers in Sclerocactus glaucus sensu lato (= S. brevispinus, S. glaucus, and S. wetlandicus), a complex that historically has been considered conspecific and afforded protection …

A New Scorzonera (Asteraceae) Species From South Anatolia, Turkey, And Its Taxonomic Position Based On Molecular Data, Kami̇l Çoşkunçelebi̇, Serdar Makbul, Mutlu Gültepe, Deni̇z Onat, Murat Erdem Güzel, Seda Okur

Turkish Journal of Botany

Scorzonera zorkunensis Coskuncelebi & S.Makbul (Asteraceae) is described and illustrated from Turkey. It grows on serpentine in alpine steppe vegetation together with several endemic Scorzonera L. species in southern Anatolia at altitudes of 2075-2100 m. It is morphologically similar to S. pisidica Hub.-Mor., but it differs in its habit and stem and leaf pubescence. Additionally, the size and micromorphological characters of the achenes and some anatomical traits of the leaves, stems, and roots are helpful in distinguishing these closely related taxa. The phylogenetic analyses based on nrDNA ITS sequence data indicate that S. pisidica is a sister species of the …

A New Species Of Silene (Caryophyllaceae) From East Anatolia (Turkey): Silene Gevasica Hamzaoğlu Sp. Nova, Ergi̇n Hamzaoğlu, Murat Koç, Ümi̇t Budak

Turkish Journal of Botany

Silene gevasica Hamzaoğlu sp. nova is described as a new species from Gevaş district (Van province). The specimen was collected from calcareous rocks, at an altitude between 2100 and 2200 m from Artos mountain. The new species is similar to Silene araratica Schischk. The differences between these 2 taxa are discussed.

Cicer Uludereensis Dönmez: A New Species Of Cicer (Chickpea) (Fabaceae) From Around The Fertile Crescent, Se Turkey, Ali̇ Aslan Dönmez

Turkish Journal of Botany

The genus Cicer L. includes an important crop plant, chickpea, which has been used as a protein source since prehistoric times. Specimens of a native Cicer have been collected and described from south-east Turkey. This new species, Cicer uludereensis Dönmez sp. nova, is distinct from a closely allied species, Cicer isauricum P.H.Davis, by its fine and more numerous teeth per leaflet, larger stipules, and narrower fruit with almost smooth seed surface. An illustration and a distribution map of the new species are provided and observations on the population are discussed.

Silene Hamzaoglui (Caryophyllaceae), A New Species From Çekerek (Yozgat, Turkey), Ümi̇t Budak, Murat Koç

Turkish Journal of Botany

Silene hamzaoglui Budak sp. nova is described as a new species from Çekerek (Yozgat, Turkey). The specimen was collected from calcareous rocky places, at an altitude between 1140 and 1180 m. The new species is similar to Silene duralii Y.Bağcı and Silene capillipes Boiss. & Heldr. The differences among these 3 species are discussed.

A New Species Of Silene (Caryophyllaceae) From Turkey, Ergi̇n Hamzaoğlu, Ahmet Aksoy, Ümi̇t Budak

Turkish Journal of Botany

Silene bayburtensis Hamzaoğlu & Aksoy sp. nov. is described as a new species from Bayburt province (Turkey). The specimen was collected on a calcareous steppe, in 2 localities, at an altitude between 1700 and 1750 m. The new species is similar to Silene pharnaceifolia Fenzl. The differences between the species are discussed.

Systematics Of The Tribe Stipeae (Gramineae) Using Molecular Data, Surrey Jacobs, Randall Bayer, Joy Everett, Mirta Arriaga, Mary Barkworth, Alexandru Sabin-Badereau, Amelia Torres, Francisco Vázquez, Neil Bagnall

Aliso: A Journal of Systematic and Floristic Botany

Internal transcribed spacer (ITS) sequences have been determined for a wide range of stipoid grasses (Poaceae, Pooideae, Stipeae). Nardus was confirmed as the most appropriate outgroup. Anisopogon is consistently included among the stipoid genera. Lithachne and Oryza form a clade and are clearly not close to Stipeae, and there is no support for including Brachyelytrum within Stipeae. Ampelodesmos and Diarrhena do appear among the core taxa in some analyses, but their positions are unstable and the evidence for retaining them is limited. So far there is inadequate support for rejecting them from Stipeae, so they should be included in any …

A Preliminary Phylogenetic Analysis Of The Grass Subfamily Pooideae (Poaceae), With Attention To Structural Features Of The Plastid And Nuclear Genomes, Including An Intron Loss In Gbssi, Jerrold I Davis, Robert J. Soreng

Aliso: A Journal of Systematic and Floristic Botany

Phylogenetic relationships in the grass family (Poaceae), with specific attention to the internal structure of subfamily Pooideae, are analyzed on the basis of nucleotide sequence variation in plastid-encoded genes (matK, ndhF, ndhH, and rbcL). The resulting phylogenetic hypothesis was examined with attention to the taxonomic distributions of two inversions and an insertion/deletion within ndhF, the absence of intron 10 of the nuclear gene GBSSI (waxy), and positions of the boundaries between the Short Single Copy (SSC) region and the neighboring Inverted Repeat (IR) regions of the plastid genome, relative to the endpoints of ndh …

A Systematic Approach To Subtribe Loliinae (Poaceae: Pooideae) Based On Phylogenetic Evidence, Pilar Catalán, Pedro Torrecilla, José A. López-Rodríguez, Jochen Müller, Clive A. Stace

Aliso: A Journal of Systematic and Floristic Botany

Loliinae (Poaceae, Pooideae) encompass a large group of genera closely related to Festuca, the largest genus in the subtribe, which as traditionally circumscribed has been shown to be highly paraphyletic. In this investigation we combined molecular and morphological data representing 20 genera of Loliinae and closely related subtribes. Combined analysis of nucleotide sequences from the nuclear ITS and chloroplast trnL–F regions and structural characters recovered a consensus topology that shows Loliinae to be monophyletic and possessing two main clades—the fine-leaved Festuca clade that includes Ctenopsis, Micropyrum, Narduroides, Psilurus, Vulpia, and Wangenheimia, and …

A Brief Nomenclatural Review Of Genera And Tribes In Theaceae, Linda M. Prince

Aliso: A Journal of Systematic and Floristic Botany

The angiosperm family Theaceae has been investigated extensively with a rich publication record of anatomical, cytological, paleontological, and palynological data analyses and interpretation. Recent developmental and molecular data sets and the application of cladistic analytical methods support dramatic changes in circumscription at the familial, tribal, and generic levels. Growing interest in the family outside the taxonomic and systematic fields warrants a brief review of the recent nomenclatural history (mainly 20th century), some of the classification systems currently in use, and an explanation of which data support various classification schemes. An abridged bibliography with critical nomenclatural references is provided.

A Comparison And Combination Of Plastid Atpb And Rbcl Gene Sequences For Inferring Phylogenetic Relationships Within Orchidaceae, Kenneth M. Cameron

Aliso: A Journal of Systematic and Floristic Botany

Parsimony analyses of DNA sequences from the plastid genes atpB and rbcL were completed for 173 species of Orchidaceae (representing 150 different genera) and nine genera from outgroup families in Asparagales. The atpB tree topology is similar to the rbcL tree, although the atpB data contain less homoplasy and provide greater jackknife support than rbcL alone. In combination, the two-gene tree recovers five monophyletic clades corresponding to subfamilies within Orchidaceae, and fully resolves them with moderate to high jackknife support as follows: Epidendroideae are sister to Orchidoideae, followed by Cypripedioideae, then Vanilloideae, and with …

A Nuclear Rdna Phylogeny Of Smilax (Smilacaceae), Kenneth M. Cameron, Chengxin Fu

Aliso: A Journal of Systematic and Floristic Botany

Smilacaceae are a taxonomically confused, cosmopolitan family of Liliales characterized by climbing habit, reticulate leaf venation, paired petiolar tendrils, unisexual flowers, and superior ovaries. Deviations from this generalized morphology have led to the division of Smilacaceae into at least seven different genera and five sections within the large genus Smilax. In particular, taxa with connate tepals (Heterosmilax), more than six stamens (Pleiosmilax, Oligosmilax), or herbaceous habit (Hemexia) have been variously classified. Using DNA sequences of 96 taxa from the nuclear rDNA ITS gene region, parsimony analyses provide moderate resolution, but generally poor bootstrap support …

Phlogeny And Biogeography Of The Prayer Plant Family, Linda M. Prince, W. John Kress

Aliso: A Journal of Systematic and Floristic Botany

Marantaceae are the second largest family in the order Zingiberales, with approximately 31 genera and 535 species. Earlier studies based on morphological and molecular characters could not confidently determine the relationships among major lineages of the family, nor could they identify the basal branch of the family tree. Phylogenetic analyses of DNA sequence data from all three genomic compartments (chloroplast: matK, ndhF, rbcL, rps16 intron, and trnL-trnF intergenic spacer; mitochondrion: cox1; nucleus: ITS region and the 5'-end of 26S) for a restricted set of taxa were conducted under parsimony criteria to define …

Net Planktonic Diatom (Bacillariophyceae) Composition Of Lake Abant (Bolu), Abuzer Çelekli̇, Okan Külköylüoğlu

Turkish Journal of Botany

The diatom flora of Lake Abant was studied monthly for 2 years (June 2003-June 2005) from 3 littoral and 2 vertical stations. A total of 123 diatom taxa were identified. Some species (Asterionella formosa Hassall, Cymbella silesiaca Bleisch, C. cistula Kirchner, Fragilaria biceps (Kützing) Lange-Bertalot, F. dilata (Brebisson) Lange-Bertalot, Navicula radiosa Kützing, and Rhopalodia gibba Müller) showed frequent occurrence in each month at all stations. Numbers of diatoms were increased in certain months in autumn, i.e. November (83 taxa) and December (68 taxa) 2003, and August (65 taxa) and September (76 taxa) 2004.

Planktonic Diatom (Bacillariophyceae) Flora Of Sultan Sazlığı Marshes (Kayseri), Aydin Akbulut

Turkish Journal of Botany

This paper describes the planktonic diatom flora of the Sultan Sazlığı marshes, Kayseri. Samples were collected systematically from the marshes over a period of 1.5 years from three stations. The diatom flora of Sultan Sazlığı is rich in terms of species and varieties, which are similar to those from many parts of Turkey. A total of 75 taxa of diatoms were identified. The diversity of species at freshwater stations was higher, than that of the brackish water station. Genera such as Fragilaria Lyngb., Navicula, Gomphonema Ehrenb., Nitzschia Hassall, Epithemia Bréb. ex Kütz. were dominant in species numbers.

Systematics And Relationships Of Fallugia (Rosoideae—Rosaceae), James Henrickson

Aliso: A Journal of Systematic and Floristic Botany

The paper presents a systematic monograph of Fallugia (Rosoideae, Rosaceae) consisting of one variable species, Fallugia paradoxa. Morphological, cytological and molecular data clearly support its relationship with Geums.l. rather than Purshia-Cowani, with which it is often allied. The species was named twice independently in 1825 from the specimens and drawings, respectively, assembled by Sessé and Mociño for their proposed Flora Mexicana. The paper discusses the nomenclatural history, morphological variation, and the polygarno-dioecious mode of reproduction of the species. No infraspecific taxa are recognized.

A Phylogenetic Classification Of Polemoniaceae, J. Mark Porter, Leigh A. Johnson

Aliso: A Journal of Systematic and Floristic Botany

Three hundred seventy nine species of Polemoniaceae are arranged in a phylogenetic classification composed of three subfamilies, eight tribes, and 26 genera. Nomenclature of one tribe is clarified and the circumscription of several tribes differs greatly from previous classifications. Five new genera, Bryantiella, Dayia, Lathrocasis, Microgilia, and Saltugilia, are proposed. In addition, four new species are described from the genera Allophyllum, Dayia, Giliastrum, and lpomopsis. This treatment represents a major reclassification with 59 new combinations, and the application of several additional combinations not used in recent years.

Phylogenetic Relationships Of Polemoniaceae: Inferences From Mitochondrial Nad1b Intron Sequences, J. Mark Porter, Leigh A. Johnson

Aliso: A Journal of Systematic and Floristic Botany

The most recent assessments of phylogenetic relationships and diversification in the flowering plant family Polemoniaceae have relied on nuclear ribosomal and chloroplast DNA sequences. We employed the mitochondrial nad1b intron, located within the second transcription unit of the first subunit of NADH dehydrogenase, for phylogenetic inference. Maximum parsimony analysis of these data provided evidence that Polemoniaceae are more closely related to families Fouquieriaceae, Diapensiaceae, Styracaceae, and Primulaceae than to families of the Solananae, where it has been classified. Fouquieriaceae are inferred to be the sister group of Polemoniaceae; however, when indels are treated as additional characters and given twice the …

Diversity And Evolution Of Seedling Baupläne In Perlargonium (Geraniaceae), Cynthia S. Jones, Robert A. Price

Aliso: A Journal of Systematic and Floristic Botany

The genus Pelargonium (Geraniaceae) exhibits tremendous variation in growth form. We apply a broadly defined concept of Bauplan in our study of growth form, architectural and anatomical features of early seedling development in the type subgenus. We analyze variation in these features within a phylogenetic framework based on sequence comparisons of internal transcribed spacer regions (ITS) of nuclear ribosomal DNA.

Preliminary ITS sequence comparisons show strong support for two major clades. One major clade contains two subgroups, one consisting of three previously recognized sections of more or less woody shrubs and subshrubs (sections Pelargonium, Glaucophyllum and Campylia), and …

New Fungi From Dasylirion (Agavaceae), Annette W. Ramaley

Aliso: A Journal of Systematic and Floristic Botany

Dead leaves of Dasylirion were collected in Texas in Guadalupe Mountains National Park and Big Bend National Park, and in the Valley of Fires, New Mexico. The fungi present were identified and grown in culture to identify teleomorph-anamorph connections. Four new ascomycete species are described—Graphyllium dasylirionis, Splanchnonema dasylirionis, Chaetoplea dasylirionis, and Chaetoplea sotolifoliorum. In addition, a new genus, Parahendersonia, is described to accommodate the coelomycete anamorph of Chaetoplea dasylirionis.

A Review Of The Classification Of The Genus Hydrastis (Ranunculaceae), Carl S. Keener

Aliso: A Journal of Systematic and Floristic Botany

The genus Hydrastis has been variously classified as a monotypic taxon in the Ranunculaceae, the Berberidaceae, the Glaucidiaceae, or its own monogeneric family, the Hydrastidaceae. The objectives of this paper were 1) to review the previous classifications of Hydrastis and 2) to critique a recent paper by Tobe and Keating reevaluating the classification of the genus based on comparative morphological and anatomical studies. One conclusion of this review was that Tobe and Keating overlooked certain important papers which might have substantially altered their conclusions, viz., that Hydrastis is sufficiently distinct from the other genera of the Ranunculaceae to warrant a …

Steps Toward A Natural System Of The Dicotyledons, Gertrud Dahlgren

Aliso: A Journal of Systematic and Floristic Botany

Embryological character states are mapped on the diagrams of dicotyledons (G. Dahlgren 1989). The often well-defined pattern of distribution forms a basis for discussing and clarifying phylogenetic relations. It is shown how numerous embryological characters, alone or in combinations, support certain systematic constellations, even if the character states may have arisen independently within a varying number of evolutionary lines. Characters presented are: anther wall formation; tapetum types; cells in pollen grains at dispersal; microsporogenesis; ovule morphology; ovule integuments; endothelium; obturator; parietal tissue; embryo sac formation; antipodal cells; hypostase, embryogeny; polyembryony; endosperm formation; persistence of endosperm; ruminate endosperm; endosperm haustoria; perisperm; …