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Full-Text Articles in Botany

Occurrences Of Small Mammal Species In A Mixedgrass Prairie In Northwestern North Dakota,, Robert K. Murphy, Richard A. Sweitzer, John D. Albertson Jun 2007

Occurrences Of Small Mammal Species In A Mixedgrass Prairie In Northwestern North Dakota,, Robert K. Murphy, Richard A. Sweitzer, John D. Albertson

The Prairie Naturalist

Documentation is limited for many species of vertebrates in the northern Great Plains, particularly northwestern North Dakota (Bailey 1926, Hall 1981). Here we report relative abundances of small « 450 g) species of mammals that were captured incidental to surveys of amphibians and reptiles at Lostwood National Wildlife Refuge (LNWR) in northwestern North Dakota from 1985 to 1987 and 1999 to 2000. Our records include a modest range extension for one species. We also comment on relationships of small mammals on the refuge to vegetation changes associated with fire and grazing disturbances.


Review Of Appreciating Your Feathered Neighbors, By Dana Gardner And Nancy Overcott, Melinda G. Knutson Jun 2007

Review Of Appreciating Your Feathered Neighbors, By Dana Gardner And Nancy Overcott, Melinda G. Knutson

The Prairie Naturalist

Fifty Common Birds of the Upper Midwest. Watercolors by Dana Gardner; text by Nancy Overcott. 2006. University of Iowa Press, Iowa City, Iowa. 106 pages. $34.95 (cloth).

What's the best way to interest a friend in bird watching? Buy them a field guide, a CD of bird songs, or take them out bird watching? All of these ideas might work, but another approach is to tell personal stories and draw pictures of common birds in yards, parks, and natural areas where they live; help them "get to know their neighbors with feathers." That's exactly what Dana Gardner and Nancy Overcott …


Silphidae (Insecta: Coleoptera) Collected In North Central North Dakota, Including New Occurrences Of Thanatophilus Sagax (Mannerheim),, Guy A. Hanley Jun 2007

Silphidae (Insecta: Coleoptera) Collected In North Central North Dakota, Including New Occurrences Of Thanatophilus Sagax (Mannerheim),, Guy A. Hanley

The Prairie Naturalist

Members of the beetle family Silphidae are relatively large (10-35 mm) and often brightly colored insects. They usually are found in association with dead animal bodies (carrion), but some are phytophagous while others are predatory. Thirty endemic species are known to occur in North America north of Mexico (Ratcliffe 1996), and 17 species in North Dakota. (Hanley et aI., unpublished data). To date, there has been little to no silphid collection data available from north central North Dakota counties, due mostly to the lack of entomological research in the area.

Nine species of silphids were collected in a single season …


Editor's Note Regarding Christmas Bird Count, Elmer J. Finck Jun 2007

Editor's Note Regarding Christmas Bird Count, Elmer J. Finck

The Prairie Naturalist

Lawrence Igl has agreed to summarize the North Dakota Christmas Bird Counts for submission to The Prairie Naturalist. We plan to have a short biography for Larry when the first summary is published. Elmer J. Finck, Editor


In Memoriam Robert N. Randall, October 26, 1915 - January 30, 2007, Clark Talkington Jun 2007

In Memoriam Robert N. Randall, October 26, 1915 - January 30, 2007, Clark Talkington

The Prairie Naturalist

Among his friends, Bob Randall will be remembered as a caring, gentle man. Bob was one of those rare individuals who had a keen awareness of everyone around him. In social settings, he would make sure that everyone was comfortable, and it was always clear that he was genuinely concerned about everyone. Those who knew him will greatly miss his gentle nature and enthusiasm for birds. He never got caught up in all of his achievements. He had a sense of balance to his life which was evident in his many interests including birding and bird banding, rocks and minerals, …


First Record Of Field Speedwell From South Dakota, Robert Tatina Jun 2007

First Record Of Field Speedwell From South Dakota, Robert Tatina

The Prairie Naturalist

Veronica agrestis L. (field speedwell or green field speedwell), a member of the Scrophulariaceae, is a small, weedy, prostrate annual with blue or white flowers (Gleason and Cronquist 1991). Until recently, its distribution included most of the eastern half of the United States and the southern two-thirds of the Great Plains, but not South Dakota (http://plants.usda.gov/java/profile?symbol=VEAG &photoID=veag_001_avd.tif, accessed 5 February 2007). Neither the Great Plains Flora Association (1986) nor Van Bruggen (1996) includes this species in the flora of South Dakota; however, the former has it naturalized in southeastern Nebraska and in Iowa (Great Plains Flora Association 1986). In May, …


Burrowing Owl Associations With Black-Tailed Prairie Dog Colonies In Southwestern Kansas And Southeastern Colorado, Stephen L. Winter, Jack F. Cully Jr. Jun 2007

Burrowing Owl Associations With Black-Tailed Prairie Dog Colonies In Southwestern Kansas And Southeastern Colorado, Stephen L. Winter, Jack F. Cully Jr.

The Prairie Naturalist

We quantified the use of black-tailed prairie dog (Cynomys ludovicianus) colonies as habitat for the burrowing owl (Athene cunicularia) in southwestern Kansas and southeastern Colorado. We used incidental sightings and breeding season avifauna surveys to document the presence of the burrowing owl on black-tailed prairie dog colonies, non-colonized rangeland, and cropland during the spring and early summer. Burrowing owl rarely was observed on noncolonized rangeland and cropland sites, and black-tailed prairie dog colonies appear to be used substantially as a habitat type for the burrowing owl in the region encompassing Cimarron and Commanche National Grasslands in …


Using Distance Sampling To Estimate Densities Of White-Tailed Deer In South-Central Minnesota, Michelle A. Larue, Clayton K. Nielsen, Marrett D. Grund Jun 2007

Using Distance Sampling To Estimate Densities Of White-Tailed Deer In South-Central Minnesota, Michelle A. Larue, Clayton K. Nielsen, Marrett D. Grund

The Prairie Naturalist

Distance sampling is a method of estimating population abundance and density used by wildlife biologists for several species because of its advantages relative to other techniques. However, few wildlife biologists have used distance sampling to estimate abundance of white-tailed deer (Odocoileus virginianus). We describe a distance sampling technique used to estimate prehunt and post-hunt population densities of deer in Watonwan County, Minnesota. Estimates of white-tailed deer density were compared between distance sampling versus population modeling, and costs for distance sampling versus aerial surveys were determined. We drove 2,704 km during 24 spotlight surveys conducted from 21 October to …


The Prairie Naturalist, Volume 39, No. 2 June 2007 Jun 2007

The Prairie Naturalist, Volume 39, No. 2 June 2007

The Prairie Naturalist

USING DISTANCE SAMPLING TO ESTIMATE DENSITIES OF WHlTE-TAILED DEER IN SOUTH-CENTRAL MINNESOTA, M. A. LaRue, C. K. Nielsen, and M. D. Grund

BURROWING OWL ASSOCIATIONS WITH BLACK-TAILED PRAIRIE DOG COLONIES IN SOUTHWESTERN KANSAS AND SOUTHEASTERN COLORADO, S. L. Winter and J. F. Cully, Jr.

OPTIMAL FORAGING IN EASTERN FOX SQUIRREL: FOOD SIZE MATTERS FOR A GENERALIST FORAGER, R. Tatina

IN MEMORIAM: ROBERT N. RANDALL. C. Talkington

Editor's Note regarding Christmas Bird Count

OCCURRENCES OF SMALL MAMMAL SPECIES IN A MIXEDGRASS PRAIRIE IN NORTHWESTERN NORTH DAKOTA, R. K. Murphy, R. A. Sweitzer, and J. D. Albertson

SILPHIDAE (INSECTA: COLEOPTERA) COLLECTED IN …


Optimal Foraging In Eastern Fox Squirrel: Food Size Matters For A Generalist Forager, Robert Tatina Jun 2007

Optimal Foraging In Eastern Fox Squirrel: Food Size Matters For A Generalist Forager, Robert Tatina

The Prairie Naturalist

Classical optimal foraging theory (OFT) predicts that an animal forages optimally when it chooses foods with the highest energy benefit or minimizes time searching for and handling food. r evaluated OFT by presenting eastern fox squirrel (Sciurus niger) multiple food items (i.e., sunflower seeds and • fruits) in various density combinations. When the choice was between foods of equal energy benefits but different costs, they chose forage items with greater costs, seemingly not foraging optimally. However, individuals showed a partial preference for food items which minimized search time, but not handling time. The eastern fox squirrel also was …


Marshes-In Photos And Words. Review Of Marshes: The Disappearing Edens By Bill Burt, Douglas H. Johnson Jun 2007

Marshes-In Photos And Words. Review Of Marshes: The Disappearing Edens By Bill Burt, Douglas H. Johnson

The Prairie Naturalist

Bill Burt has done it again. The author of two superbly illustrated books (Shadowbirds and Rare and Elusive Birds of North America) that were reviewed earlier in this journal, Burt has returned with another excellent book, this one focusing on marshes. Like his earlier books, Marshes features wonderful close-up views of many hard-to-photograph birds. Here, in addition, are grand images of marsh landscapes and other marsh denizens, especially plants. Burt best characterizes his own book, which he intends as "an evocation and exploration, rather than a catalog of marshland life." He tells of his 30 years spent prowling …


Notes On Black-Footed Ferret Detectability And Behavior, David S. Jachowski Jun 2007

Notes On Black-Footed Ferret Detectability And Behavior, David S. Jachowski

The Prairie Naturalist

Despite over two decades of recovery efforts, the black-footed ferret (Mustela nigripes) remains one of the least understood and most critically endangered mammals in North America. Once extinct in the wild, over 2,400 captive-born individuals of black-footed ferret (hereafter referred to as ferret) have been released at 13 reintroduction sites ranging from northern Montana to Chihuahua, Mexico, since 1991. However, ferret populations currently are considered to be self-sustaining at only two sites in South Dakota and a single site in Wyoming (United States Fish and Wildlife Service 2006). To understand why ferret recovery is not succeeding at a …


First Record Of Corisella Inscripta (Uhler) (Heteroptera: Corixidae) From North Dakota, Bruce A. Hanson, David M. Mushet, Ned A. Euliss Jr., Stephen Chordas Iii May 2007

First Record Of Corisella Inscripta (Uhler) (Heteroptera: Corixidae) From North Dakota, Bruce A. Hanson, David M. Mushet, Ned A. Euliss Jr., Stephen Chordas Iii

The Prairie Naturalist

Corisella inscripta is a water boatman species that was reported in H. B. Hungerford's (1948) seminal monograph as occurring throughout Mexico and nine western states of the United States. Subsequently, additional records of C. inscripta have been reported for British Columbia in Canada (Maw et al. 2000) and for Montana (Roemhild 1976), Arkansas (Cochran and Harp 1990), Missouri (Polhemus et al. 1988), Ohio (Chordas and Armitage 1998), and Michigan (Chordas et al. 2002) in the United States. There have been no published records of C. inscripta from North Dakota (Fig. I). We collected one male C. inscripta at the Cottonwood …


Review Of Some Scarce Birds Of The Upper Midwest By Dana Gardner And Nancy Overcott, Stephen J. Dinsmore May 2007

Review Of Some Scarce Birds Of The Upper Midwest By Dana Gardner And Nancy Overcott, Stephen J. Dinsmore

The Prairie Naturalist

Fifty Uncommon Birds of the Upper Midwest. Watercolors by Dana Gardner; text by Nancy Overcott. 2007. University of Iowa Press, Iowa City, Iowa. 112 pages. $34.95 (cloth).

Nancy Overcott has written series of short essays of birds found in the Upper Midwest and assembled them in an easy-to-read book. As an ornithologist and avid birder in this region, I'll admit that I didn't know what to expect when I opened the cover-would the focus be on rarities, would there be an identification component, are there tips for finding each species, and at what audience was the book aimed? Ultimately, I …


Mallard Brood Movements In The Canadian Prairie Parklands, Garnet H. Raven, Todd W. Arnold, David W. Howerter, Llwellyn M. Armstrong Mar 2007

Mallard Brood Movements In The Canadian Prairie Parklands, Garnet H. Raven, Todd W. Arnold, David W. Howerter, Llwellyn M. Armstrong

The Prairie Naturalist

We radiotracked 308 mallard (Anas platyrhynchos) broods from hatching until 30 days of age Oij 15 study areas located throughout the Canadian Prairie Parklands to examine patterns of variation in movement frequency and distance. Broods moved an average of 350 m from nests to first wetlands (SO = 390), with 94% of broods moving less than I km. After leaving the nest, broods had a 23% probability of moving to a new wetland each day, but movement probability was a complex function of study area, hatch date, and ducking age, with younger and earlier-hatched broods exhibiting greater movement …


Woodland Bird Use Of In-Channel Islands In The Central Platte River, Nebraska, William C. Scharf Mar 2007

Woodland Bird Use Of In-Channel Islands In The Central Platte River, Nebraska, William C. Scharf

The Prairie Naturalist

Recapture data showed woodland obligate birds from riparian habitats made substantial use of thinly vegetated, adjacent small islands in the Platte River. During the bird nesting and spring migration seasons of 200 I through 2004, there were 4,360 individuals of 90 species captured on both mainland and in: hannel island sites. Island locafion captures totaled 595 individuals of 47 species )etween 2002 and 2004. Islands formerly were considered inconsequential for coraging and nesting of passerines. My study substantiated passerine use of Islands and provided a rationale for additional consideration of islands for migration and nesting management. Assemblages of bird species …


Intraspecific And Interspecific Territoriality In Microtus Ochrogaster And M. Pennsylvanicus, David J. Tazik, Lowell L. Getz Mar 2007

Intraspecific And Interspecific Territoriality In Microtus Ochrogaster And M. Pennsylvanicus, David J. Tazik, Lowell L. Getz

The Prairie Naturalist

Adult female Microtus ochrogaster and M. pennsylvanicus displayed interspecific territorial behavior in a bluegrass site in Illinois. We concluded that within a site, interspecific territorial behavior might be a factor in non-synchronous population fluctuations characteristic of the two species.


Partial Characterization Of Two Moderately Halophilic Bacteria From A Kansas Salt Marsh, Aileen M. Johnson, Lance R. Thurlow, Sam R. Zwenger, Eric T. Gillock Mar 2007

Partial Characterization Of Two Moderately Halophilic Bacteria From A Kansas Salt Marsh, Aileen M. Johnson, Lance R. Thurlow, Sam R. Zwenger, Eric T. Gillock

The Prairie Naturalist

Two bacterial species were isolated from a salt marsh located on privately owned land in Russell County, Kansas. Water samples from the saIt marsh were streaked for isolation on tryptic soy agar supplemented with 12 % NaCI. Visual scanning of the plates revealed two prominent colony types. The two colony types were subcultured repeatedly until axenic cultures were obtained. 80th of these organisms were shown to be moderately halophilic. The organisms were characterized partially by fatty acid methyl ester analysis, 16S rRNA sequencing, and scanning electron microscopy. These studies revealed that the bacteria previously were unreported members of genera Marinococcus …


The Prairie Naturalist, Volume 39, No.1, March 2007 Mar 2007

The Prairie Naturalist, Volume 39, No.1, March 2007

The Prairie Naturalist

CONTENTS

MALLARD BROOD MOVEMENTS IN THE CANADIAN PRAIRIE PARKLANDS G. H. Raven, T. W. Arnold, D. W. Howerter, and L. M. Armstrong

WOODLAND BIRD USE OF IN-CHANNEL ISLANDS IN THE CENTRAL PLATTE RIVER, NEBRASKA, W. C. Scharf

PARTIAL CHARACTERIZATION OF TWO MODERATELY HALOPHILIC BACTERIA FROM A KANSAS SALT MARSH, A. M. Johnson, L. R. Thurlow, S. R. Zwenger, and E. T. Gillock

INTRASPECIFIC AND INTERSPECIFIC TERRITORIALITY IN MICROTUS OCHROGASTER AND M. PENNSYLVANICUS, D. J. Tazik and L. L. Getz

VEGETATIVE CHARACTERISTICS OF PRONGHORN BED SITES IN WIND CAVE NATIONAL PARK, SOUTH DAKOTA, C. N. Jacques, J. A. Jenks, J. D. …


Vegetative Characteristics Of Pronghorn Bed Sites In Wind Cave National Park, South Dakota, Christopher N. Jacques, Jonathan A. Jenks, Jaret D. Sievers, Daniel E. Roddy Mar 2007

Vegetative Characteristics Of Pronghorn Bed Sites In Wind Cave National Park, South Dakota, Christopher N. Jacques, Jonathan A. Jenks, Jaret D. Sievers, Daniel E. Roddy

The Prairie Naturalist

Much of the previous literature on pronghorn (Antilocapra americana) fawns has focused on fawn mortality (Beale 1978, Barrett 1984, Gregg et al. 2001) and social behavior (Kitchen 1974, Autenrieth and Fichter 1975, Bromley 1977). Selection of bed sites by pronghorn fawns is a major factor affecting fawn survival (Bromley 1978, Barrett 1981, O'Gara et al. 1986, VanSchmus 1990) because adequate cover is a crucial component of fawn bed site selection (Autenrieth 1984). Alldredge et al. (1991) reported that fawns selected dense shrub cover but avoided the most-dense cover in sagebrush-steppe communities in southcentral Wyoming while Tucker and Gamer …


Die Forschungen Der Mitarbeiter Und Absolventen Des Institutes Für Geobotanik Der Martin-Luther-Universität Halle-Wittenberg In Der Mongolei In Zusammenarbeit Mit Ihren Mongolischen Fachkollegen, Werner Hilbig, Karsten Wesche, Eckehart J. Jäger Jan 2007

Die Forschungen Der Mitarbeiter Und Absolventen Des Institutes Für Geobotanik Der Martin-Luther-Universität Halle-Wittenberg In Der Mongolei In Zusammenarbeit Mit Ihren Mongolischen Fachkollegen, Werner Hilbig, Karsten Wesche, Eckehart J. Jäger

Erforschung biologischer Ressourcen der Mongolei / Exploration into the Biological Resources of Mongolia, ISSN 0440-1298

Gives an overview of research in Mongolia that was conducted by botanists from the University of Halle in cooperation with their Mongolian colleagues. A summary was compiled of expeditions and related activities covering more than 40 years of cooperation between 1962 and 2006, including a list of the respective participants, the duration of travel, the areas of Mongolia visited, the main aims, and principal publications.


Fertility Restoration Of The Sorghum A3 Male-Sterile Cytoplasm Through A Sporophytic Mechanism Derived From Sudangrass, Hoang V. Tang, Jeffrey F. Pedersen, Christine D. Chase, Daryl R. Pring Jan 2007

Fertility Restoration Of The Sorghum A3 Male-Sterile Cytoplasm Through A Sporophytic Mechanism Derived From Sudangrass, Hoang V. Tang, Jeffrey F. Pedersen, Christine D. Chase, Daryl R. Pring

Department of Agronomy and Horticulture: Faculty Publications

Fertility restoration of sorghum [Sorghum bicolor (L.) Moench] lines carrying the IS1112C (A3 group) male-sterile cytoplasm has been documented as a two-gene gametophytic mechanism involving complementary action of restoring alleles designated Rf3 and Rf4, as derived from IS1112C. Fertility restoration capability has also been reported from sudangrass (S. bicolor subsp. drummondii) populations. We describe characteristics of a fertility restoration system derived from sudangrass, in which male-sterile individuals were observed at high frequency in backcross and F2-F3 segregating populations. Segregation analyses were consistent with a sporophytic restoration system involving two complementary genes. Pollen iodine staining in fertile …


Array-Based Genotyping And Expression Analysis Of Barley Cv. Maythorpe And Golden Promise, Harkamal Walia, Clyde Wilson, Pascal Condamine, Abdelbagi M. Ismail, Jin Xu, Xinping Cui, Timothy J. Close Jan 2007

Array-Based Genotyping And Expression Analysis Of Barley Cv. Maythorpe And Golden Promise, Harkamal Walia, Clyde Wilson, Pascal Condamine, Abdelbagi M. Ismail, Jin Xu, Xinping Cui, Timothy J. Close

Department of Agronomy and Horticulture: Faculty Publications

Background: Golden Promise is a salt-tolerant spring barley closely related to Maythorpe. Salt tolerance in Golden Promise has been attributed to a single mutation at the Ari-e locus (on 5H) resulting from irradiation of Maythorpe. Golden Promise accumulates lower shoot Na+ compared to Maythorpe when growing under saline conditions. This study focused on elucidating the genetic basis and mechanisms involved in this difference. Results: The level of polymorphism between the two genotypes was explored using the Barley1 GeneChip for single feature polymorphisms (SFPs) and an oligonucleotide pool assay for single nucleotide polymorphisms (SNPs). Polymorphism analyses revealed three haplotype blocks …


Publishing Ltd Whole-Plant Mineral Partitioning Throughout The Life Cycle In Arabidopsis Thaliana Ecotypes Columbia, Landsberg Erecta, Cape Verde Islands, And The Mutant Line Ysl1ysl3, Brian M. Waters, Michael A. Grusak Jan 2007

Publishing Ltd Whole-Plant Mineral Partitioning Throughout The Life Cycle In Arabidopsis Thaliana Ecotypes Columbia, Landsberg Erecta, Cape Verde Islands, And The Mutant Line Ysl1ysl3, Brian M. Waters, Michael A. Grusak

Department of Agronomy and Horticulture: Faculty Publications

• Minimal information exists on whole-plant dynamics of mineral flow through Arabidopsis thaliana or on the source tissues responsible for mineral export to developing seeds. Understanding these phenomena in a model plant could help in the development of nutritionally enhanced crop cultivars. • A whole-plant partitioning study, using sequential harvests, was conducted to characterize growth and mineral concentrations and contents of rosettes, cauline leaves, stems, immature fruit, mature fruit hulls, and seeds of three WT lines (Col-0, Ler, and Cvi) and one mutant line (Col-0::ysl1ysl3). • Shoot mineral content increased throughout the life cycle for all minerals, although tissue-specific mineral …


Ethylene Involvement In The Regulation Of The H+-Atpase Csha1 Gene And Of The New Isolated Ferric Reductase Csfro1 And Iron Transporter Csirt1 Genes In Cucumber Plants, Brian M. Waters, Carlos Lucena, Francisco J. Romera, Gena G. Jester, April N. Wynn, Carmen L. Rojas, Esteban Alcántara, Rafael Pérez-Vicente Jan 2007

Ethylene Involvement In The Regulation Of The H+-Atpase Csha1 Gene And Of The New Isolated Ferric Reductase Csfro1 And Iron Transporter Csirt1 Genes In Cucumber Plants, Brian M. Waters, Carlos Lucena, Francisco J. Romera, Gena G. Jester, April N. Wynn, Carmen L. Rojas, Esteban Alcántara, Rafael Pérez-Vicente

Department of Agronomy and Horticulture: Faculty Publications

In previous works using ethylene inhibitors and precursors, it has been shown that ethylene participates in the regulation of several Fe-deficiency stress responses by Strategy I plants, such as enhanced ferric reductase activity, rhizosphere acidification, and subapical root hair development. Furthermore, recent evidence suggests that ethylene could regulate the expression of both the ferric reductase and the iron transporter genes of Strategy I plants by affecting the FER (or FER-like) transcription factor. Recently, two H+-ATPase genes have been isolated from cucumber roots, CsHA1 and CsHA2. CsHA1 is up-regulated under Fe deficiency while CsHA2 is constitutively expressed. In …


Barcsoysnp23: A Panel Of 23 Selected Snps For Soybean Cultivar Identification, M. S. Yoon, Q.J. Song, I. Y. Choi, James E. Specht, D. L. Hyten, P. B. Cregan Jan 2007

Barcsoysnp23: A Panel Of 23 Selected Snps For Soybean Cultivar Identification, M. S. Yoon, Q.J. Song, I. Y. Choi, James E. Specht, D. L. Hyten, P. B. Cregan

Department of Agronomy and Horticulture: Faculty Publications

This report describes a set of 23 informative SNPs (BARCSoySNP23) distributed on 19 of the 20 soybean linkage groups that can be used for soybean cultivar identification. Selection of the SNPs to include in this set was made based upon the information provided by each SNP for distinguishing a diverse set of soybean genotypes as well as the linkage map position of each SNP. The genotypes included the ancestors of North American cultivars, modern North American cultivars and a group of Korean cultivars. The procedure used to identify this subset of highly informative SNP markers resulted in a significant increase …


Nutrient Use Efficiency – Measurement And Management, Achim Dobermann Jan 2007

Nutrient Use Efficiency – Measurement And Management, Achim Dobermann

Department of Agronomy and Horticulture: Faculty Publications

Mineral fertilizers have sustained world agriculture and thus global population and wealth growth for more than 100 years (Smil, 2001; Stewart et al., 2005). Th eir contribution to increasing crop yields has spared millions of hectares of natural ecosystems that otherwise would have been converted to agriculture (Balmford et al., 2005). However, lacking, imbalanced, inappropriate or excessive use of nutrients in agricultural systems remains a concern. Nutrient mining is a major cause for low crop yields in parts of the developing world, particularly Africa. In other situations, nutrients such as nitrogen (N) and phosphorus (P) often move beyond …


A Soybean Transcript Map: Gene Distribution, Haplotype And Single-Nucleotide Polymorphism Analysis, Ik-Young Choi, D. L. Hyten, Lakshmi K. Matukumalli, Qijian Song, Julian M. Chaky, Charles V. Quigley, Kevin Chase, K. Gordon Lark, Robert S. Reiter, Mun-Sup Yoon, Eun-Young Hwang, Seung-In Yi, Nevin D. Young, Randy C. Shoemaker, Curtis P. Van Tassell, James E. Specht, P. B. Cregan Jan 2007

A Soybean Transcript Map: Gene Distribution, Haplotype And Single-Nucleotide Polymorphism Analysis, Ik-Young Choi, D. L. Hyten, Lakshmi K. Matukumalli, Qijian Song, Julian M. Chaky, Charles V. Quigley, Kevin Chase, K. Gordon Lark, Robert S. Reiter, Mun-Sup Yoon, Eun-Young Hwang, Seung-In Yi, Nevin D. Young, Randy C. Shoemaker, Curtis P. Van Tassell, James E. Specht, P. B. Cregan

Department of Agronomy and Horticulture: Faculty Publications

The first genetic transcript map of the soybean genome was created by mapping one SNP in each of 1141 genes in one or more of three recombinant inbred line mapping populations, thus providing a picture of the distribution of genic sequences across the mapped portion of the genome. Singlenucleotide polymorphisms (SNPs) were discovered via the resequencing of sequence-tagged sites (STSs) developed from expressed sequence tag (EST) sequence. From an initial set of 9459 polymerase chain reaction primer sets designed to a diverse set of genes, 4240 STSs were amplified and sequenced in each of six diverse soybean genotypes. In the …


Highly Variable Patterns Of Linkage Disequilibrium In Multiple Soybean Populations, D. L. Hyten, Ik-Young Choi, Qijian Song, Randy C. Shoemaker, Randall L. Nelson, Jose M. Costa, James E. Specht, P. B. Cregan Jan 2007

Highly Variable Patterns Of Linkage Disequilibrium In Multiple Soybean Populations, D. L. Hyten, Ik-Young Choi, Qijian Song, Randy C. Shoemaker, Randall L. Nelson, Jose M. Costa, James E. Specht, P. B. Cregan

Department of Agronomy and Horticulture: Faculty Publications

Prospects for utilizing whole-genome association analysis in autogamous plant populations appear promising due to the reported high levels of linkage disequilibrium (LD). To determine the optimal strategies for implementing association analysis in soybean (Glycine max L. Merr.), we analyzed the structure of LD in three regions of the genome varying in length from 336 to 574 kb. This analysis was conducted in four distinct groups of soybean germplasm: 26 accessions of the wild ancestor of soybean (Glycine soja Seib. et Zucc.); 52 Asian G. max Landraces, the immediate results of domestication from G. soja; 17 Asian Landrace …


Map Location Of The Rpp1 Locus That Confers Resistance To Soybean Rust In Soybean, D. L. Hyten, G. L. Hartman, R. L. Nelson, R. D. Frederick, V. C. Concibido, J. M. Narvel, P. B. Cregan Jan 2007

Map Location Of The Rpp1 Locus That Confers Resistance To Soybean Rust In Soybean, D. L. Hyten, G. L. Hartman, R. L. Nelson, R. D. Frederick, V. C. Concibido, J. M. Narvel, P. B. Cregan

Department of Agronomy and Horticulture: Faculty Publications

Soybean rust (SBR), caused by Phakopsora pachyrhizi, was first discovered in North America in 2004 and has the potential to become a major soybean [Glycine max (L.) Merr.] disease in the USA. Currently, four SBR resistance genes have been identifi ed but not mapped on the soybean genetic linkage map. One of these resistance genes is the Rpp1 gene, which is present in the soybean accession PI 200492. The availability of molecular markers associated with Rpp1 will permit marker-assisted selection and expedite the incorporation of this gene into U.S. cultivars. We compared simple sequence repeat (SSR) markers between …