Botany Commons^™

Duplicate Gene Expression In Allopolyploid Gossypium Reveals Two Temporally Distinct Phases Of Expression Evolution, Lex E. Flagel, Joshua A. Udall, Dan Nettleton, Jonathan F. Wendel

Dan Nettleton

Polyploidy has played a prominent role in shaping the genomic architecture of the angiosperms. Through allopolyploidization, several modern Gossypium (cotton) species contain two divergent, although largely redundant genomes. Owing to this redundancy, these genomes can play host to an array of evolutionary processes that act on duplicate genes. We compared homoeolog (genes duplicated by polyploidy) contributions to the transcriptome of a natural allopolyploid and a synthetic interspecific F1 hybrid, both derived from a merger between diploid species from the Gossypium A-genome and D-genome groups. Relative levels of A- and D-genome contributions to the petal transcriptome were determined for 1,383 gene …

A Gradient Of Pollination Specialization In Three Species Of Bolivian Centropogon, Laura P. Lagomarsino, Nathan Muchhala

Nathan Muchhala

Rethinking Invasion Impacts Across Multiple Field Sites Using European Swallowwort (Vincetoxicum Rossicum) As A Model Invader, Grant L. Thompson, Terrence H. Bell, Jenny Kao-Kniffin

Grant Thompson

Living Seeds Of History: The John Stokes And Mary's Gardens Exhibit, Stephanie Shreffler, Kayla Harris

Kayla Harris

This panel describes how the University of Dayton planned and carried out an exhibit on the John Stokes and Mary’s Gardens archival collection, featuring a garden inside the library. A “Mary garden” is a garden filled with flowers named for Mary.

The panel describes the content of the collection and how the exhibit was originally conceived; the exhibit design and programming; and the challenges faced during the planning process.

The exhibit provided a way for the Libraries to promote an archival collection that not only closely connected with the University’s mission as a Catholic institution, but also provided new opportunities …

Floristic Response To Urbanization: Filtering Of The Bioregional Flora In Indianapolis, Indiana, Usa, Rebecca W. Dolan, Myla F.J. Aronson, Andrew L. Hipp

Rebecca W. Dolan

PREMISE OF THE STUDY: Globally, urban plant populations are becoming increasingly important, as these plants play a vital role in ameliorating effects of ecosystem disturbance and climate change. Urban environments act as filters to bioregional flora, presenting survival challenges to spontaneous plants. Yet, because of the paucity of inventory data on plants in landscapes both before and after urbanization, few studies have directly investigated this effect of urbanization. METHODS: We used historical, contemporary, and regional plant species inventories for Indianapolis, Indiana USA to evaluate how urbanization filters the bioregional flora based on species diversity, functional traits, and phylogenetic community structure. …

Supplemental Data, Russell J. Ingram, Foster Levy, Cindy L. Barrett, James T. Donaldson

Foster Levy

No abstract provided.

Evolution Of Floral Zygomorphy In Androecium And Corolla In Solanaceae, Jingbo Zhang, Peter F. Stevens, Wenheng Zhang

Peter Stevens

Phospholipase Dζ Enhances Diacylglycerol Flux Into Triacylglycerol, Wenyu Yang, Geliang Wang, Jia Li, Philip David Bates, Xuemin Wang, Douglas K. Allen

Xuemin (Sam) Wang

Invasive Species In An Urban Flora: History And Current Status In Indianapolis, Indiana, Rebecca W. Dolan

Rebecca W. Dolan

Invasive plant species are widely appreciated to cause significant ecologic and economic damage in agricultural fields and in natural areas. The presence and impact of invasives in cities is less well documented. This paper characterizes invasive plants in Indianapolis, Indiana. Based on historical records and contemporary accounts, 69 of the 120 species on the official Indiana state list are reported for the city. Most of these plants are native to Asia or Eurasia, with escape from cultivation as the most common mode of introduction. Most have been in the flora of Indianapolis for some time. Eighty percent of Indianapolis’ invasive …

Non-Specific Phospholipase C1 Affects Silicon Distribution And Mechanical Strength In Stem Nodes Of Rice, Huasheng Cao, Lin Zhuo, Yuan Su, Linxiao Sun, Xuemin Wang

Xuemin (Sam) Wang

Membrane Glycerolipidome Of Soybean Root Hairs And Its Response To Nitrogen And Phosphate Availability, Fang Wei, Brian Fanella, Liang Guo, Xuemin Wang

Xuemin (Sam) Wang

Bacon's Swamp- Ghost Of A Central Indiana Natural Area Past, Rebecca W. Dolan

Rebecca W. Dolan

Bacon’s Swamp was identified in the 1920s as a ca. 12 ha glacial kettle lake bog system at the southernmost limits of these habitats in Indiana. Located just 9.6 km from the center of Indianapolis, the site was all but destroyed in the mid-20th century by urban expansion. Prior to habitat conversion at the site, Bacon’s Swamp was a frequent location for Butler University ecology class field trips and student research projects. Herbarium specimens and published inventory records allow for analysis of the historical vegetation of Bacon’s Swamp using modern techniques. Floristic Quality Assessment applied to these historical records reveals …

Plicate Staminal Filaments In Tillandsia Subgenus Anoplophytum (Bromeliaceae), T. M. Evans, Gregory K. Brown

Gregory K Brown

Plication of stamina!filaments is an important diagnostic character for Tillandsia subgenus Anoplophytum (ca. 45 species). The monophyletic integrity of subgenus Anoplophytum has recently been questioned, and we conducted an anatomical investigation of plicate stamina! filaments to better characterize this putative synapomorphy. Developmental studies show that the filament plications, or folds, become visible during or soon after anthesis. Serial sections of preplication filaments and filaments in sequential stages of plication were prepared and observed with light microscopy. A uniform sequence of parenchyma cell collapse begins three to four cell layers out from the vascular bundle and proceeds centrifugally to the epidermis. …

Changes In Plant Species Composition And Structure In Two Peri-Urban Nature Preserves Over 10 Years, Rebecca W. Dolan, Jessica D. Stepens, Marcia E. Moore

Rebecca W. Dolan

Peri-urban natural areas, at the boundaries of cities and adjacent agricultural/rural land, are subject to ecological threats endemic to both land use types. We used permanent plots to document changes in habitat quality by monitoring herbaceous-layer plant species presence and cover over a decade (1996/97 and 2007) in two peri-urban nature preserves in central Indiana, U.S.A. The preserves are comprised of different forest community types: wet-mesic depressional forest and mesic upland forest. Habitat characteristics, based on Floristic Quality Assessment parameters, showed only a single change for either preserve between survey years: wetness values were lower in the wet-mesic depressional site …

Two Hundred Years Of Forest Change: Effects Of Urbanization On Tree Species Composition And Structure, Rebecca W. Dolan

Rebecca W. Dolan

Despite their importance, the dynamics of urban floras are not well understood and quantitative historical data are rare. The current study used three data sets for trees in Indianapolis/Marion County, Indiana, U.S., to document change over 200 years to the original beech-maple forest and to examine future implications of contemporary tree planting efforts in light of these changes. Data on tree composition and size collected before significant settlement in the early 1800s are compared with recent surveys of trees in remnant natural areas and with trees found on city streets and rights-of-way. All the species recorded in historical surveys are …

Translocation In Tomato , Charles William Whitehead

Charles K Whitehead

No abstract provided.

The Effects Of Silica, Nitrogen, And Phosphorus Limitation On The Biochemical Composition Of Cyclotella Meneghiniana Kütz: An Experimental Analysis , David Fred Millie

David F. Millie

The effects of silica, nitrogen, and phosphorus limitation on the amount of cellular lipid, fatty acid, glucan, protein and chlorophyll of Cyclotella meneghiniana Kutz. were investigated in batch and semi-continuous culture experiments. In batch cultures, cells were removed from nutrient-replete media and resuspended in nutrient-deficient media according to a 2('3) factorial design in fractional replication. Cells were analyzed 3 and 9 days after transfer to treatment media. Of the 3 nutrients, only silica had a significant effect on a biochemical variable. Silica deficiency caused a significant increase (300%) in the amount of cellular protein. Cellular protein was also significantly different …

Lineage Sorting In Multihost Parasites: Eidmanniella Albescens And Fregatiella Aurifasciata On Seabirds From The Galapagos Islands, Jose L. Rivera-Parra, Iris I. Levin, Kevin P. Johnson, Patricia G. Parker

Patricia Parker

Next-Generation Field Guides, Elizabeth J. Farnsworth, Miyoko Chu, W. John Kress, Amanda K. Neill, Jason H. Best, John Pickering, Robert D. Stevenson, Gregory W. Courtney, John K. Vandyk, Aaron M. Ellison

John K. VanDyk

To conserve species, we must first identify them. Field researchers, land managers, educators, and citizen scientists need up-to-date and accessible tools to identify organisms, organize data, and share observations. Emerging technologies complement traditional, book-form field guides by providing users with a wealth of multimedia data. We review technical innovations of next-generation field guides, including Web-based and stand-alone applications, interactive multiple-access keys, visual-recognition software adapted to identify organisms, species checklists that can be customized to particular sites, online communities in which people share species observations, and the use of crowdsourced data to refine machine-based identification algorithms. Next-generation field guides are user …

Systematics Of The Lobulomycetales, A New Order Within The Chytridiomycota, David Rabern Simmons

David Simmons

Based on molecular phylogenetic analyses, the polyphyletic order Chytridiales, one of the four orders in the Chytridiomycota, contains several well-supported clades. One species, Chytriomyces angularis, however, does not group within the robust clades of the Chytridiales or any other chytrid order. The light-level morphology and zoospore ultrastructure of this aquatic species also differ from those of the type species of the genus Chytriomyces. I amassed nine additional pure culture isolates of soil-inhabiting chytrids with morphologies or rDNA sequences similar to C. angularis, including two isolates of C. poculatus, and studied the molecular phylogeny of these ten chytrids. Results of the …

Documenting Effects Of Urbanization On Flora Using Herbarium Records, Rebecca W. Dolan, Marcia E. Moore, Jessica Stephens

Rebecca W. Dolan

As human populations increasingly live in cities, urban floras and the ecosystem services they provide are under increasing threat. Understanding the effects of urbanization on plants can help to predict future changes and identify ways to preserve biological diversity. Relatively few studies document changes through time in the flora of a focal region and those that do primarily address European floras. They often rely on contemporary spatial gradient studies as surrogates for changes with time. We compare historical species records (prior to 1940) with the current flora for Marion County, Indiana, USA, home to Indianapolis, the 13th largest city in …

Weed Seed Germplasm Collection 1964-2014 Of The Weed Biology Laboratory, Jack Dekker

Jack Dekker

J. Dekker weed seed germplasm collection; including: Lots 1-3974: 1964-2014; main seed library listed by lot numbers. Lots 649-1457: 1989 all-Iowa Setaria transect study. Lots 1762-1812: 1981; Diane Manthey, North Dakota St. Univ., Setaria collection at Bob Anderson's (USDA, Univ. of Minn) 1960's wild oat study sites. Lots 2389-2595: 1992 north temperate world collection (Japan, Russia, Europe) by J. Dekker. Lots 3270-3685: 1993 Brent Reschly transect study of eastern Iowa conventional and Amish farmers. Lots 3786-3962: 2000 J. Dekker 2000 salt-tolerant Setaria of southern Japan collection. All seed in all these collections belong, and were collected and archived by Jack …

Population Dynamics Of Ludwigia Leptocarpa (Onagraceae) And Some Factors Affecting Size Hierarchies In A Natural Population, Rebecca W. Dolan, Rebecca R. Sharitz

Rebecca W. Dolan

Germination cohorts of Ludwigia leptocarpa, a semi-aquatic annual plant were marked in the field at time of establishment and followed through the 1981 and 1982 growing seasons at a site in southern South Carolina. Data from each cohort were pooled to determine demographic characteristics of the population as a whole, then analyzed separately to determine the effect of time on germination on survivorship, relative growth rate, and adult size. Changes in numbers of L. leptocarpa fit a Deevey Type II survivorship curve. This and other characteristics of the species classify it as ‘r-selected’. Aspects of the life history may reflect …

Maine's Kelp Highway, Catherine Schmitt

Catherine Schmitt

No abstract provided.

A Global Analysis Of The Impacts Of Urbanization On Bird And Plant Diversity Reveals Key Anthropogenic Drivers, Myla F.J. Aronson, Frank A. La Sorte, Charles H. Nilon, Madhusudan Katti, Mark A. Goddard, Christopher A. Lepczyk, Paige S. Warren, Nicholas S.G. Williams, Sarel Cilliers, Bruce Clarkson, Cynnamon Dobbs, Rebecca W. Dolan, Marcus Hedblom, Stefan Klotz, Jip Louwe Kooijmans, Ingolf Kühn, Ian Macgregor-Fors, Mark Mcdonnell, Ulla Mörtberg, Petr Pyšek, Stefan Siebert, Jessica Sushinsky, Peter Werner, Marten Winter

Rebecca W. Dolan

Urbanization contributes to the loss of the world's biodiversity and the homogenization of its biota. However, comparative studies of urban biodiversity leading to robust generalities of the status and drivers of biodiversity in cities at the global scale are lacking. Here, we compiled the largest global dataset to date of two diverse taxa in cities: birds (54 cities) and plants (110 cities). We found that the majority of urban bird and plant species are native in the world's cities. Few plants and birds are cosmopolitan, the most common beingColumba livia and Poa annua. The density of bird and plant species …

Resolution Of Deep Nodes Yields An Improved Backbone Phylogeny And A New Basal Lineage To Study Early Evolution Of Asteraceae, Jose L. Panero, Susana E. Freire, Luis Ariza Espinar, Bonnie S. Crozier, Gloria E. Barboza, Juan J. Cantero

Jose L. Panero

A backbone phylogeny that fully resolves all subfamily and deeper nodes of Asteraceae was constructed using 14 chloroplast DNA loci. The recently named genus Famatinanthus was found to be sister to the Mutisioideae–Asteroideae clade that represents more than 99% of Asteraceae and was found to have the two chloroplast inversions present in all Asteraceae except the nine genera of Barnadesioideae. A monotypic subfamily Famatinanthoideae and tribe Famatinantheae are named herein as new. Relation- ships among the basal lineages of the family were resolved with strong support in the Bayesian analysis as (Barnadesioideae (Famatinanthoideae (Mutisioideae (Stifftioideae (Wunderlichioideae– Asteroideae))))). Ancestral state reconstruction …

Synthesis And Future Directions: What Have Harsh Environments Taught Us About Ecology, Evolution, Conservation, And Restoration?, Nishanta Rajakaruna, Robert S. Boyd, Tanner B. Harris

Nishanta Rajakaruna

No abstract provided.

Additional Lichen Records And Minerological Data From Metal-Contaminated Sites In Maine, Ian D. Medeiros, Alan M. Fryday, Nishanta Rajakaruna

Nishanta Rajakaruna

Geochemistry and mineralogy of rocks play important roles in the occurrence of individual lichen species and assembly of lichen communities. Whereas lichens of metal-enriched settings have been a focus of study for many decades, only a few such lichen inventories exist for North America. We reexamined the lichen biota of Pine Hill, a serpentine outcrop on Little Deer Isle, Maine and Callahan Mine, a copper- and zinc-enriched Superfund site in Brooksville, Maine by conducting additional field surveys and reexamining unidentified taxa from previous collections. To better characterize the substrates upon which the lichens were found, we conducted elemental analyses via …

Different Meal, Same Flavor: Cospeciation And Host Switching Of Haemosporidian Parasites In Some Non-Passerine Birds, Diego Santiago-Alarcon, Adriana Rodríguez-Ferraro, Patricia G. Parker, Robert E. Ricklefs

Robert Ricklefs

Different Meal, Same Flavor: Cospeciation And Host Switching Of Haemosporidian Parasites In Some Non-Passerine Birds, Diego Santiago-Alarcon, Adriana Rodríguez-Ferraro, Patricia G. Parker, Robert E. Ricklefs

Patricia Parker