Agricultural Science Commons^™

Pestfacts Wa Issue 08 - July 2022, Benjamin S. Congdon, Svetlana Micic, Cindy L. Webster, Jean Galloway, Janette Pratt

PestFacts WA

PestFacts WA Issue 08 - July 2022 contents:

• Cold winter conditions are reducing winged aphid activity
• Russian wheat aphid
• UCI BlacklegCM – A new decision support tool for upper canopy blackleg management

Pestfacts Wa Issue 10 - July 2022, Saleh Adnan, Benjamin S. Congdon, Alan Lord

PestFacts WA

PestFacts WA Issue 10 - July 2022 contents:

• Russian wheat aphids found at Geraldton
• Turnip yellows virus detected n canola in Albany port zone
• Meet PestFacts WA team member – Alan Lord

Pestfacts Wa Issue 11 - July 2022, Ciara Beard, Geoff J. Thomas

PestFacts WA

PestFacts WA Issue 11 - July 2022 contents:

• Wheat powdery mildew in the Geraldton port zone

Increased Signal-To-Noise Ratios Within Experimental Field Trials By Regressing Spatially Distributed Soil Properties As Principal Components, Jeffrey C. Berry, Mingsheng Qi, Balasaheb V. Sonawane, Amy Sheflin, Asaph Cousins, Jessica Prenni, Daniel P. Schachtman, Peng Liu, Rebecca S. Bart

Department of Agronomy and Horticulture: Faculty Publications

Environmental variability poses a major challenge to any field study. Researchers attempt to mitigate this challenge through replication. Thus, the ability to detect experimental signals is deter-mined by the degree of replication and the amount of environmental variation, noise, within the experimental system. A major source of noise in field studies comes from the natural heterogeneity of soil properties which create microtreatments throughout the field. In addition, the variation within different soil properties is often nonrandomly distributed across a field. We explore this challenge through a sorghum field trial dataset with accompanying plant, microbiome, and soil property data. Diverse sorghum …

Synergies Of Integrated Pest And Pollinator Management In Avocado Farming In East Africa: An Ex-Ante Economic Analysis, Charity Wangithi, Beatrice W. Muriithi, Gracious Diiro, Thomas Dubois, Samira Mohamed, Michael G. Lattorff, Benignus V. Ngowi, Elfatih M. Abdel-Rahman, Mariam Adan, Menale Kassie

All Peer-Reviewed Publications

Using synthetic pesticides to manage pests can threaten pollination services, affecting the productivity of pollination-dependent crops such as avocado. The need to mitigate this negative externality has led to the emergence of the concept of integrated pest and pollinator management (IPPM) to achieve both pest and pollinator management, leading to complementary or synergistic benefits for yield and quality of the harvest. This paper aims to evaluate the potential economic and welfare impact of IPPM in avocado production systems in Kenya and Tanzania. We utilize both primary and secondary data and employed the economic surplus model. On average the potential economic …

Expression Of Atwri1 And Atdgat1 During Soybean Embryo Development Influences Oil And Carbohydrate Metabolism, Cintia Lucía Arias, Truyen Quach, Tu Huynh, Hanh Nguyen, Ademar Moretti, Yu Shi, Ming Guo, Amira Rasoul, Kyujung Van, Leah Mchale, Thomas E. Clemente, Ana Paula Alonso, Chi Zhang

Department of Agronomy and Horticulture: Faculty Publications

Soybean oil is one of the most consumed vegetable oils worldwide. Genetic improvement of its concentration in seeds has been historically pursued due to its direct association with its market value. Engineering attempts aiming to increase soybean seed oil presented different degrees of success that varied with the genetic design and the specific variety considered. Understanding the embryo’s responses to the genetic modifications introduced, is a critical step to successful approaches. In this work, the metabolic and transcriptional responses to AtWRI1 and AtDGAT1 expression in soybean seeds were evaluated. AtWRI1 is a master regulator of fatty acid (FA) biosynthesis, and …

Critical P, K And S Concentrations In Soil And Shoot Samples For Optimal Tedera Productivity And Nodulation, Daniel Real, Richard G. Bennett, Nazanin K. Nazeri, David M. Weaver

Grain and Other Field Crops Research Articles

Tedera is a forage legume that can provide out-of-season green feed in Mediterranean climates. To date, growers have had no comprehensive soil nutrition guidelines to optimise tedera production. We undertook field and glasshouse studies to understand tedera’s macronutrient requirements. Three field experiments were sown with tedera cv. Lanza® at Cunderdin, Dandaragan and Three Springs in Western Australia. These experiments evaluated seven levels of phosphorus (P) (0–30 kg ha−1) and potassium (K) (0–80 kg ha−1) and two combined treatments with P and K. Glasshouse pot experiments were conducted using tedera cultivars Lanza® and Palma and lucerne cultivar SARDI Grazer. Ten concentrations …

Fine-Mapping And Characterisation Of Genes On Barley (Hordeum Vulgare) Chromosome 2h For Salinity Stress Tolerance During Germination, Edward Mwando, Yong Han, Tefera Angessa, Xiao-Qi Zhang, Chengdao Li

Grain and Other Field Crops Research Articles

Salinity causes a detrimental impact on plant growth, particularly when the stress occurs during germination and early development stages. Barley is one of the most salt-tolerant crops; previously we mapped two quantitative trait loci (QTL) for salinity tolerance during germination on the short arm of chromosome 2H using a CM72/Gairdner doubled haploid (DH) population. Here, we narrowed down the major QTL to a region of 0.341 or 0.439 Mb containing 9 or 24 candidate genes belonging to 6 or 20 functional gene families according to barley reference genomes v1 and v3 respectively, using two DH populations of CM72/Gairdner and Skiff/CM72, …

Sustainable Intensification Of Wheat Production Under Smallholder Farming Systems In Burera, Musanze And Nyamagabe Districts Of Rwanda, Athanase Rusanganwa Cyamweshi, Nsharwasi Léon Nabahungu, Jackson Cirhuza Mirali, Job Kihara, George Oduor, Harrison Rware, Gudeta Weldesemayat Sileshi

All Peer-Reviewed Publications

The productivity of wheat is low on smallholder farms in Rwanda. Although mineral fertiliser use is being promoted as a sustainable intensification (SI) pathway, little is known about the nutrient use efficiency and profitability of various fertiliser inputs in Burera, Musanze and Nyamagabe districts of Rwanda. The objective of this study was to assess the use of combinations of nitrogen (N), phosphorus (P), potassium (K), magnesium (Mg), zinc (Zn) and boron (B) in wheat production in terms of nutrients management specifically, crop yield, production risk, input use efficiency and economic returns on smallholder farms. The study was conducted in three …

Links Between Soilborne Pathogens, Plant Parasitic Nematodes, Farm Management And Biophysical Constraints In A Southern Australian Rainfed Cropping System, Martin Harries, Ken C. Flower, Michael Renton, Sarah J. Collins, Daniel Huberli

Grain and Other Field Crops Research Articles

Context: Rotations in rainfed farming systems of southwest Australia have shifted towards intensified cropping and it is necessary to reassess soilborne pathogens and plant parasitic nematodes within this context. Aims: We tested the hypothesis that these recent changes in rotations and agronomy have altered the efficacy with which rotations reduce the incidence of common root pathogens and plant parasitic nematodes. Methods: We tracked changes in common pathogen DNA in soil and the incidence and severity of crop root damage in 184 paddocks, over 6 years from 2010 to 2015, and related this to farmer practices. Key results: Overall, severe root …

Identification Of Putative Snp Markers Associated With Resistance To Egyptian Loose Smut Race(S) In Spring Barley, Kamal A.M. Abo-Elyousr, Amira M.I. Mourad, P. Stephen Baenziger, Abdelaal H.A. Shehata, Peter E. Eckstein, Aaron D. Beattie, Ahmed Sallam

Department of Agronomy and Horticulture: Faculty Publications

Loose smut (LS) disease is a serious problem that affects barley yield. Breeding of resistant cultivars and identifying new genes controlling LS has received very little attention. Therefore, it is important to understand the genetic basis of LS control in order to genetically improve LS resistance. To address this challenge, a set of 57 highly diverse barley genotypes were inoculated with Egyptian loose smut race(s) and the infected seeds/plants were evaluated in two growing seasons. Loose smut resistance (%) was scored on each genotype. High genetic variation was found among all tested genotypes indicating considerable differences in LS resistance that …

Improving Growth And Yield Of Sunflower With Integrated Use Of Compost And Pgpr (Variovorax Paradoxus) With Different Levels Of N-Chemical Fertilizer, Muhammad Imran, Muhammad Javed Akhtar, Sarmad Frogh Arshad, Muhammad Ashfaq, Muhammad Zeeshan Gulzar, Hafiz Shahzad Ahmad, Kashif Bashir, Zulqurnain Khan, Hasan Riaz, Tanveer Ul Haq

Journal of Bioresource Management

Plant growth-promoting rhizobacteria (PGPRs) stimulate plant growth through their ability, to increasing the root length and growth, by asymbiotic nitrogen fixation, by producing siderophores, solubilization of mineral phosphates and mineralization of other nutrients. Organic waste material of fruits and vegetables was collected and composted in a locally fabricated composting unit. A pot trial was conducted to study the effectiveness of compost and PGPR (Variovorax paradoxus) with recommended rate of PK and with different rates of N fertilizer i.e. 50 %, 75 % and 100 %, on growth and yield of sunflower. Results showed that the integrated use of …

Determination Of Crop Coefficient Of Hybrid Wheat Under Arid Climate: A Pot Study, Saba Wajid, Muhammad Imran, Hafiz Shahzad Ahmad, Muhammad Zeeshan Gulzar, Tanveer Ul Haq, Abdul Ghaffar, Sarmad Frogh Arshad, Zulqurnain Khan, Kashif Bashir, Hasan Riaz

Journal of Bioresource Management

Climate change increases vulnerabilities for crop productivity in Pakistan. Water crises are increasing with an increase in temperature and change in precipitation patterns due to climate change which ultimately imposed a threat to the food security of the country. Water is indispensable for all plants to complete life cycle as the unavailability of water at critical growth stages drastically affects the development of the plant. The present pot study was conducted for the estimation of crop coefficient of hybrid wheat for irrigation scheduling at Muhammad Nawaz Shareef University of Agriculture, Multan during two growing seasons 2018-19 and 2019-20. In this …

Legacy Lead In Urban Garden Soils: Communicating Risk And Limiting Exposure, Anna Paltseva, Zhongqi Cheng, Murray Mcbride, Maha Deeb, Sara Perl Egendorf, Peter M. Groffman

Advanced Science Research Center

Lead (Pb) exposure has long been recognized as a hazard to human health. Urban garden soils often contain elevated levels of Pb, mainly from legacy sources, which is a main barrier for urban gardening. The capacity of gardeners to access, understand, and act on scientific data related to soil contamination is also variable. This synthesis paper briefly summarizes the current scientific knowledge on soil Pb in urban gardens. Our objective is to produce clear recommendations about assessing actual risks and limiting exposure. First, we synthesize the nature and extent of soil contamination with Pb, and then describe how the bioavailability …

Sorghum Association Panel Whole-Genome Sequencing Establishes Cornerstone Resource For Dissecting Genomic Diversity, J. Lucas Boatwright, Sirjan Sapkota, Hongyu Jin, James C. Schnable, Zachary Brenton, Richard Boyles, Stephen Kresovich

Department of Agronomy and Horticulture: Faculty Publications

Association mapping panels represent foundational resources for understanding the genetic basis of phenotypic diversity and serve to advance plant breeding by exploring genetic variation across diverse accessions. We report the whole-genome sequencing (WGS) of 400 sorghum (Sorghum bicolor (L.) Moench) accessions from the Sorghum Association Panel (SAP) at an average coverage of 38× (25–72×), enabling the development of a high-density genomic marker set of 43 983 694 variants including single-nucleotide polymorphisms (approximately 38 million), insertions/deletions (indels) (approximately 5 million), and copy number variants (CNVs) (approximately 170 000). We observe slightly more deletions among indels and a much higher prevalence …

Pestfacts Wa Issue 07 - June 2022, Alan Lord, Dusty Severtson, Cindy L. Webster, Svetlana Micic, Kithsiri Jayasena, Geoff J. Thomas, Ciara Beard, Andrea Hills, Jean Galloway

PestFacts WA

PestFacts WA Issue 07 - June 2022 contents:

• Native budworm moths and caterpillars are being found early
• 2022 winter spring insecticide spray guide is now available
• Monitor barley crops for net blotches
• Powdery mildew in barley and wheat
• Sclerotinia apothecia
• Spartacus leaf tipping

Plant Growth And Defense Traits In Sorghum Bicolor’S Response To Chilo Partellus In The Tropics, Adekunle W. Adesanya, Maria Isabel Gomez, Kimberly Morrell, Charles Midega, Zeyaur Khan, André Kessler, Katja Poveda

All Peer-Reviewed Publications

In order to meet the increasing demands from an exploding human population, sustainable agriculture relies on the availability of crop varieties with high yields and optimal defenses to pests. However, ample work has suggested that domesticated plants could have reduced defenses at the expense of increased biomass or yield, and these potential trade-offs can vary among plant species and genotypes. Herbivory coping mechanisms such as tolerance and resistance can be expressed differently among plant genotypes, with variable relationships and inherent fitness costs. Knowledge of the connection between growth and defense mechanisms in cultivated plants is still limited, especially in tropical …

Developing A Miniature Smart Boat For Marine Research, Michael Isaac Eirinberg

Computer Engineering

This project examines the development of a smart boat which could serve as a possible marine research apparatus. The smart boat consists of a miniature vessel containing a low-cost microcontroller to live stream a camera feed, GPS telemetry, and compass data through its own WiFi access point. The smart boat also has the potential for autonomous navigation. My project captivated the interest of several members of California Polytechnic State University, San Luis Obispo’s (Cal Poly SLO) Marine Science Department faculty, who proposed a variety of fascinating and valuable smart boat applications.

Recombination Hotspots In Soybean [Glycine Max (L.) Merr.], Samantha J. Mcconaughy

Department of Agronomy and Horticulture: Dissertations, Theses, and Student Research

Recombination allows for the exchange of genetic material between two parents which plant breeders exploit to make new and improved varieties. This recombination is not distributed evenly across the chromosome. In crops, it mostly occurs in the euchromatic regions of the genome and even then, recombination is focused into recombination hotspots flanked by recombination cold spots. Understanding the distribution of these hotspots along with the sequence motifs associated with them may lead to methods that enable breeders to better exploit recombination in breeding.

In chapter 1 background information on recombination, recombination hotspots detection methods, landscape of recombination (describe recombination patterns …

Pestfacts Wa Issue 06 - June 2022, Cindy L. Webster, Svetlana Micic, Alan Lord, Benjamin S. Congdon, Steve Collins

PestFacts WA

PestFacts WA Issue 06 - June 2022 contents:

• African black beetle
• Aphid and turnip yellows virus update
• Cutworm caterpillars
• European earwigs are damaging canola
• Other recent insect activity
• New PestFacts WA Reporter app available for apple devices

Water Quality, Carrier Volume And Droplet Size Effects On Herbicide Efficacy And Drift Potential, Barbara Houston

Department of Agronomy and Horticulture: Dissertations, Theses, and Student Research

Herbicide performance is directly related to the amount of active ingredient that has been deposited on the plant. Hence, spray solution characteristics and application parameters are crucial in determining the efficacy of an herbicide application. To maximize the effectiveness of chemical control, methods to deliver full chemical dose must be utilized: allowing the active ingredient to be readily absorbed once added to the carrier and mitigating off-target movement and low herbicide doses. Water is the most frequently used carrier in herbicide applications. Chemical parameters, such as water hardness and pH, can have a critical role in herbicide performance. It is …

The Plant And The Pathogen: Elucidating The Relationship Between Root-Knot Nematodes, Ph Levels, And Arabidopsis Thaliana Development, Rachel Garnett

Undergraduate Theses and Capstone Projects

Root-knot nematodes (RKNs) within the Meloidogyne genus are considered one of the largest threats to plant health and subsequent crop yield and profit (Forghani and Hajihassani 2020; Bernard et al. 2017). As a pest that presents global consequences, its mitigation through sustainable interventions may confer results for the treatment of similar plant pathogens. A member of the Brassicaeae family, Arabidopsis thaliana, was chosen for this study to determine how this model plant responds to RKN-standard pH media. pH was varied between control and experimental groups, and the phenotypic variables of primary root length and plant height were observed and analyzed. …

Progress In Research On Site-Specific Nutrient Management For Smallholder Farmers In Sub-Saharan Africa, P. Chivenge, S. Zingore, K. S. Ezui, S. Njoroge, M. A. Bunquin, A. Dobermann, K. Saito

All Peer-Reviewed Publications

Increasing fertilizer access and use is an essential component for improving crop production and food security in sub-Saharan Africa (SSA). However, given the heterogeneous nature of smallholder farms, fertilizer application needs to be tailored to specific farming conditions to increase yield, profitability, and nutrient use efficiency. The site-specific nutrient management (SSNM) approach initially developed in the 1990 s for generating field-specific fertilizer recommendations for rice in Asia, has also been introduced to rice, maize and cassava cropping systems in SSA. The SSNM approach has been shown to increase yield, profitability, and nutrient use efficiency. Yield gains of rice and maize …

Lintul-Cassava-Npk: A Simulation Model For Nutrient-Limited Cassava Growth, J. G. Adiele, A. G.T. Schut, K. S. Ezui, K. E. Giller

All Peer-Reviewed Publications

A solid understanding of the dynamics of plant nutrient requirements and uptake from the soil is needed to provide robust fertilizer recommendations, timing of applications and nutrient use efficiency. Our objective was to develop and test the ability of the crop model LINTUL-Cassava-NPK to simulate biomass growth and yield of cassava under nutrient-limited conditions. We used experimental data from six fields located in three different agro-ecologies in Nigeria: Rainforest Zone– Ogoja and Ikom (Cross River), Rainforest Transition Zone – Ekpoma (Edo) and Guinea Savanna Zone – Otukpo (Benue) over two consecutive growing seasons from 2016 to 2018. Nutrient stress in …

Grain-Filling Rate Improves Physical Grain Quality In Barley Under Heat Stress Conditions During The Grain-Filling Period, Hamid Shirdelmoghanloo, Kefei Chen, Blakely Paynter, Tefera Angessa, Sharon Westcott, Hammad Aziz Khan, Camilla Beate Hill, Chengdao Li

Grain and Other Field Crops Research Articles

Heat stress is a primary constraint to Australia's barley production. In addition to impacting grain yield, it adversely affects physical grain quality (weight and plumpness) and market value. The incidence of heat stress during grain filling is rising with global warming. However, breeding for new superior heat-tolerant genotypes has been challenging due to the narrow window of sensitivity, the unpredictable nature of heat stress, and its frequent co-occurrence with drought stress. Greater scientific knowledge regarding traits and mechanisms associated with heat tolerance would help develop more efficient selection methods. Our objective was to assess 157 barley varieties of contrasting genetic …

Evaluating The Effect Of Coated Urea And Urea-Ammonium-Nitrate Solution On Cane Tonnage, Sugar Yield, And Leaf-Soil Nitrogen Content Under Louisiana Sugarcane Production System, Hector J. Mendoza Lagos

LSU Master's Theses

Nitrogen (N) is a crucial nutrient for proper plant growth and development. N deficiency results in poor tillering and thin, short internode stem production for sugarcane production, thus resulting in low cane tonnage. Therefore, proper N fertilizer management is essential for a sustainable sugarcane production system. This research was conducted at the LSU AgCenter Sugar Research Station in St. Gabriel, LA, from 2019 to 2020 at three Sites (Site 1, 2, and 3). The treatments consisted of different N rates (0, 45, 90, and 135 kg N ha^-1) and sources (urea-ammonium-nitrate solution [UAN]-32%, 30-day [Coated Urea 1], 45-day …

Water Use Efficiency In Western Australian Cropping Systems, Martin Harries, Ken C. Flower, Michael Renton, Geoffrey C. Anderson

Grain and Other Field Crops Research Articles

Rotations and associated management practices in rainfed farming systems of southwest Australia have shifted towards intensified cropping. Survey data from 184 fields spanning 14 Mha of southwest Australia were used to document water use efficiency (WUE) and water-limited yield potential (WLYP) of commercial crops and crop sequences and identify biophysical variables influencing WUE. WUE achieved in commercial wheat crops was 10.7 kg grain/ha.mm. Using a boundary function Ywl = 25 × (WU − 45), farmers achieved 54% of WLYP. Climate variables affected WUE more than management and biotic variates, the highest latitude region having WUE of 9.0 kg grain/ha.mm, compared …

Investigating The Mechanics And Chemistry Of Sickle Polish Development, Justin Jared Dubois

Graduate Theses and Dissertations

This series of experiments is designed to understand the development and chemistry of sickle gloss. Sickles are common in the archaeological record and have long been studied for their eponymous “sickle gloss”. There is debate as to how this gloss is formed. Five experimental sickles containing flint and novaculite blades were used to harvest high and low moisture content rye and common fescue and associated field weeds. The differences in the development of sickle gloss were examined. High moisture content plants create thick, smooth fields of polish with undulating, billowing margins at a higher developmental speed. Low moisture content plants …

Pestfacts Wa Issue 05 - May 2022, Jean Galloway, Cindy L. Webster, Steve Collins

PestFacts WA

PestFacts WA Issue 05 - May 2022 contents:

• Blackleg and the risk of sowing canola on canola
• Meet PestFacts WA team member – Steve Collins

Pestfacts Wa Issue 04 - May 2022, Svetlana Micic, Benjamin S. Congdon, Cindy L. Webster, Andrea Hills, Ravjit Khangura

PestFacts WA

PestFacts WA Issue 04 - May 2022 contents:

• Grasshoppers are hatching
• Aphid activity and turnip yellows virus detections
• Downy mildew and damping off in canola
• Nodorum blotch in wheat
• Plant disease webinar recording can now be viewed online