Agricultural Science Commons^™

Genome Wide Association Study (Gwas) On Different Economic Traits And Epigenetic Stability Of Sweetpotato In Louisiana, Ajay Dhungana

LSU Doctoral Dissertations

Sweetpotato [Ipomoea batatas (L.) Lam] is a globally important food, feed, and industrial crop, yet its improvement is constrained by a complex hexaploid genome, clonal propagation, and susceptibility to multiple diseases. In Louisiana, production is threatened primarily by Fusarium oxysporum f. sp. batatas (Fusarium wilt) and Ceratocystis fimbriata (Black rot). Furthermore, the in vitro propagation methods essential for disease-free planting material and germplasm conservation can introduce epigenetic instability that undermines clonal fidelity. This dissertation integrates genome-wide association studies (GWAS), genotype by environment interaction (GEI) and DNA methylation profiling to dissect resistance mechanisms and assess epigenetic stability in Louisiana sweetpotato …

Vertical Price Transmission In The Philippine Rice Supply Chain: Responses To Shocks In The Post-Tariffication Period, Bates Bathan

The Philippine Agricultural Scientist

In the post-Rice Tariffication Law (RTL) period, several protectionist policies and state interventions have reemerged in the Philippine rice market. Using national-level time series data from January 2018 to April 2025, the study applies autoregressive distributed lag models to assess the impact of policy changes and external shocks on unmilled rice (palay) and rice prices. Results show that National Food Authority (NFA) rice stocks significantly affect palay farmgate prices and special rice retail prices. Vertical price transmission flows from farmgate to wholesale levels for special rice, and from wholesale to retail levels for well-milled and regular-milled rice. Major …

The Dual Nature Of Weedy Rice (Oryza Sativa F. Spontanea): From A Noxious Weed To An Important Genetic Resource For Rice Improvement, Rica M. Rentino, Vanessa Sernicula, May O. Palanog, Roselyn G. Alfetche, Dan Michael A. Angay, Francis L. Tejada, Dexter G. Balboa, Shaireen M. Angay, Fatima-Nasra A. Sahadain, Teodora E. Mananghaya, Karl Vincent J. Jose, Liezel C. Llanes, Jonathan M. Niones, Karla Mae R. Nonog, Frodie F. Waing, Leonilo Gramaje, Albert Christian S. Suner, Ommal H. Abdulkadi, Norvie L. Manigbas, Jose E. Hernandez, Alvin D. Palanog

The Philippine Agricultural Scientist

Weedy rice (Oryza sativa f. spontanea) is becoming a serious threat to rice production in the Philippines, especially in direct-seeding rice areas, owing to its high competitiveness and its similarity to cultivated rice in morphology and ecological requirements. However, weedy rice can be considered both a threat that endangers rice production and an opportunity, as it offers a potential source of novel genes for rice improvement. This study evaluated the extent of weedy rice infestation in direct-seeding areas in the Visayas, measured the phenotypic and genotypic diversity of collected weedy rice ecotypes using simple sequence repeat (SSR) markers, and …

Heterosis For Flowering Time And Leaf Traits In F1 Hybrids From Desi And Kabuli Chickpeas [Research Note], Gizem Kamçi, Behiye Tuba Biçer

The Philippine Agricultural Scientist

The study was conducted at the Faculty of Agriculture in Dicle University, Southeast Anatolia, Türkiye, during the 2023 growing season to estimate heterosis, heterobeltiosis, and dominance for phenological, leaf, and plant traits in F₁ hybrids from desi × kabuli and kabuli × kabuli chickpea crosses. In 2022, 2 desi (Black, ICCV 10) and 3 kabuli (Azkan, ILC 533, ILC 482) chickpea varieties were crossed, producing 10 hybrids and 5 parents evaluated in a randomized complete block design with 3 replications. Significant variation was found among genotypes for all traits. Days to first flowering ranged from 55.7 to 69.0 d, with …

Evaluation Of Publicly Available Maize Germplasm Adaptation To Environments In Nebraska, Garrett Snodgrass

Department of Agronomy and Horticulture: Dissertations, Theses, and Student Research

Publicly available maize germplasm represents an important resource for breeding programs seeking to expand genetic diversity and improve hybrid performance. However, effective use requires characterization of per se phenotypic performance of parental lines and evaluation of the parental line’s hybrid progeny adaptation to a given target population of environments. Furthermore, understanding population structure and heterotic grouping is imperative for maximizing efficiency of breeding decisions. The objectives of this study were to (1) evaluate phenotypic performance of parental lines and hybrids across environments in Nebraska, and to (2) refine heterotic group classification of parental lines within the University of Nebraska-Lincoln’s Hybrid …

Integrative Effects Of Mycorrhizal Fungi, Azotobacter, And Azospirillum With Different Nitrogen Levels On Morphophysiological Responses And Drought Tolerance Of Maize (Zea Mays L.) ‘Sc706’ Under Varying Water Deficit Conditions, Nozar Shamohammadi, Mahdi Zare, Korosh Ordookhani, Farshid Aref, Shahram Sharafzadeh

The Philippine Agricultural Scientist

Under drought stress, soil fertility declines sharply, restricting nutrient availability and reducing plant productivity. This study evaluated the effects of mycorrhiza, Azotobacter, and Azospirillum combined with nitrogen on the morpho-physiological traits of maize (Zea mays L.) hybrid SC706 plants under different water deficit conditions. The experiment was conducted at a research field in Fars Province, Iran, over 2 consecutive years (2017–2018, 2018–2019) and applied a split-split plot design based on a Randomized Complete Block Design (RCBD) with 3 replicates. It assessed the effects of the 3 biological fertilizers in 4 treatment groups (Control [B1], inoculation with mycorrhiza alone …

Wayne E. Sabbe Arkansas Soil Fertility Studies 2025, Nathan A. Slaton

Arkansas Agricultural Experiment Station Research Series

Rapid technological changes in crop management and production require that the research efforts be presented in an expeditious manner. The contributions of soil fertility and fertilizers are major production factors in all Arkansas crops. The studies described within will allow producers to compare their practices with the university’s research efforts. Additionally, soil-test data and fertilizer sales are presented to allow comparisons among years, crops, and other areas within Arkansas.

Spatial Variability Of Nitrates And Nitrogen Mineralization Kinetics And Their Effects In Long-Term Tillage Systems, Bibash Rokaya

Department of Agronomy and Horticulture: Dissertations, Theses, and Student Research

Nitrogen (N) and water management are essential for water quality protection and crop production. However, soil N and water are spatiotemporally variable. Soil water spatial dependencies are described in the literature with known associations with preferential flows among other factors. In contrast, a knowledge gap exists on the spatial dependence of soil N mineralization kinetics. We hypothesize that soil N mineralization kinetics and soil water have distinct and cross-correlated spatial characteristics among soil management practices and climatic regions. For the field study, we measured soil-N mineralization kinetics, volumetric water content (VWC), and a suite of soil properties along ~70 m …

To Hold Or Sell Breeding Cattle In The Rangelands, Department Of Primary Industries And Regional Development, Western Australia

Animal production and livestock factsheets

In a dry season where feed, water and finances are limited, removing less productive animals as soon as possible is a good option. This will free up feed for more productive animals and help preserve ground cover.

This page provides some of the information and a process for making decisions about holding or selling breeding cattle.

Wa Insecticide Guide 2026 - Autumn Winter, Rebecca Severtson, Svetlana Micic, Andrew Phillips

PestFacts WA

Registered chemicals for broadacre crops in Western Australia The insecticides listed in the tables within this guide can be used on any crop appearing on the chemical label, if the rate used does not exceed the highest rate that is registered for use on that crop. There are many products with different trade names that contain the same active ingredient. This list is not exhaustive and does not imply any specific recommendations of brand names. Unless otherwise specified, all insecticides listed are emulsifiable concentrates (EC). Other insecticide formulations are suspension concentrate (SC), wettable powder (WP), capsule suspension (CS), wettable granules …

Wa Insecticide Guide 2026 - Winter Spring, Svetlana Micic, Cindy L. Webster, Rebecca Severtson

PestFacts WA

Registered chemicals for broadacre crops in Western Australia.

The insecticides listed in the tables within this guide can be used on any crop appearing on the chemical label, if the rate used does not exceed the highest rate that is registered for use on that crop.

There are many products with different trade names that contain the same active ingredient. This list is not exhaustive and does not imply any specific recommendations of brand names.

Unless otherwise specified, all insecticides listed are emulsifiable concentrates (EC). Other insecticide formulations are suspension concentrate (SC), wettable powder (WP), capsule suspension (CS), wettable granules …

Managing The Legacy Of Historical Land Use In Central Appalachia: Soil Health, Carbon Storage, And Restoration Across Disturbed Ecosystems, Kyra R. Dukich

Graduate Theses, Dissertations, and Problem Reports (ETD)

Historical mining, intensive timber harvesting, agriculture, and atmospheric acid deposition have left lasting impacts on soil health throughout the Central Appalachian region, reducing soil productivity, carbon storage, and ecosystem resilience. This thesis evaluated restoration strategies across two long-term research systems in West Virginia to determine how land-use history and soil amendments influence soil health, carbon dynamics, and ecosystem recovery. The first study examined reclaimed mine lands and marginal agricultural soils planted with switchgrass (Panicum virgatum) or willow (Salix spp.) and treated with biochar or inorganic fertilizer. Soil greenhouse gas production, aggregate stability, total soil C:N, pH, and soil organic matter …

The Effect Of Cover Crop Management Strategies On Nutrient Availability In No-Till Corn, Emily C. Marsh

Theses and Dissertations--Plant and Soil Sciences

Cover crops are reported to have long-term soil health improvements, one of which is reducing erosion. However, popular cereal cover crops, such as rye (Secale cereale L.), have the potential to cause a yield penalty in the following corn (Zea mays L.) crop due to a reduction in available nitrogen. Legumes, such as Austrian winter pea (Pisum sativum L. var. arvense), are thought to reduce this yield penalty due to their capacity to fix nitrogen. Sulfur is another nutrient of interest, especially as rates of atmospheric deposition of sulfur have declined, leading to more deficiencies being …

Kentucky Bluegrass (Poa Pratensis L.) As A Perennial Groundcover: Establishment And Weed Management In Corn, Kiera S. Searcy

Theses and Dissertations--Plant and Soil Sciences

Perennial groundcover (PGC) systems offer a cost-effective alternative to annual cover crops, by providing continuous soil cover, reducing soil erosion, and contributing to integrated weed management (IWM) in corn (Zea mays L.) production systems. Kentucky bluegrass (Poa pratensis L.) has been proposed as a perennial groundcover for corn due to its low growth habit and seasonal dormancy; however, successful adoption is limited by challenges associated with establishment-phase weed competition and compatibility with weed management programs during corn production. The objectives of this research were to (1) evaluate weed management strategies that support Kentucky bluegrass establishment and (2) assess …

Soil Nutrient Sufficiency Versus Plant Nutrient Status In Compost-Amended Soils: Plant Tissue Analysis As A Diagnostic Tool, Chandralekha Joga Miss

Murray State Theses and Dissertations

This study evaluated whether Mehlich III soil nutrient sufficiency ratings reliably predict plant nutrient status and chlorophyll response across contrasting compost application histories. A greenhouse pot experiment was conducted with Chijimisai (Brassica rapa) planted in three treatment soils that had no compost (T1), moderate compost history (T2), and long-term hog manure compost application (T3). Plant performance was assessed through weekly shoot length and chlorophyll content (SPAD) measurements, leaf number at maturity, and leaf tissue nutrient analysis conducted at harvest. Soil test results indicated adequate to high nutrient levels across all three treatments. Leaf tissue analysis, however, revealed substantial …

Hydroponics In The Classroom: Cultivating Plants, Captivating Young People, Stacy A. Adams, Christian Stephenson, Theresa James, Kim Todd

Department of Agronomy and Horticulture: Faculty Publications

Few students take the initiative to pursue coursework beyond that required for progression to graduation. Limited are opportunities that connect educational content to industry application, potentially inspiring young people towards impactful careers. The United States government has emphasized the importance of STEM education to ensure national security and to maintain economic competitiveness globally. STEM education is not a defined discipline but an approach for building knowledge through application and engagement. Developing and managing a hydroponics prototype provides numerous opportunities for embedding STEM content into a fun and interactive project. This poster provides inspiration for constructing a simple deep water culture …

An Analysis Of Systemic And Contact Herbicide Usage Trends In Illinois Corn Production Systems, Paige E. Mckittrick

Murray State Theses and Dissertations

Herbicide use is central to weed management in Illinois corn production; however, long-term changes in the balance between systemic and contact herbicides have not been well quantified at the statewide scale. This study analyzes herbicide trends in Illinois corn from 1982 to 2016 using secondary data from the USDA Agricultural Chemical Use Survey, paired with climate, regulatory, and herbicide resistance information. Herbicide active ingredients were classified into systemic and contact functional categories and grouped according to Weed Science Society of America (WSSA) mode-of-action (MOA) codes. For each survey year, total herbicide load (lb a.i./acre), functional proportions, MOA-specific contributions, and a …

Effects Of Compost Incorporated Versus Surface Applied On Soybean Yield And Soil Health, Maheshwari Kuchanapally

Theses and Dissertations

Compost application is increasingly recognized as a sustainable soil management practice that enhances soil health and crop production. However, the method of application, incorporated versus surface applied, may influence its effectiveness in improving soil properties and crop productivity. This study evaluated the effects of compost application method on soybean (Glycine max L. Merr.) yield and soil health at Illinois State University Research Farm in Lexington, Illinois, across two growing seasons, 2024 and 2025. The 2024 experiment used a Completely Randomized Design comparing incorporated versus surface-applied compost (n = 4; 8 plots). The 2025 experiment used a Randomized Complete Block Design …

Comparative Analysis Of Color, Texture, And Water Content In Three Shallot Cultivars At Different Harvest Ages, Rahma Wati Lestari, Kusumiyati, Syariful Mubarok

Jurnal Kultivasi

Shallots are a major horticultural commodity with high economic value. The quality of shallots is determined not only by the quantity of the harvest but also by physical characteristics such as bulb color, texture, and water content. This study aims to evaluate the differences in these physical parameters in three popular local cultivars: Brebes, Sumenep, and Tuktuk, harvested at 56, 63, and 70 days after planting (DAP), respectively. This research uses a Randomized Block Design consisting of 9 treatment combinations and analyzed using the SmartstatXL application. Color measurements are conducted using the CIELAB method and converted to CIELCH and RGB …

Antioxidant Enzymes And Osmolyte Accumulation In Okra Cultivars Under Drought Stress, Jawad Ali, Ibadullah Jan, Hidayat Ullah, Muhammad Adnan, Shah Fahad, Hassan Alsberi, Khulud Albalawi, Hakki Akdeniz, Manzoor Ahmmad, Beena Saeed, Noor Us Sabah, Mian Sayed Khan, Abdul Basir, Muhammad Romman, Ayman El Sabagh

The Philippine Agricultural Scientist

Drought stress brought about by worsening environmental conditions due to climate change has increasingly damaging effects on crop production systems. To mitigate these effects, several physiological and biochemical aspects of plants could be used as markers in breeding for the selection of drought-resistant cultivars. Therefore, this study aimed to evaluate the performance of 8 okra cultivars (Arka Anamika, Punjab Selection, Posaswami, Tulsi, Subz Pari, Super Green, Local Multani, and Green Star) under well-watered (control), mild drought stress, and severe drought stress conditions by irrigating plants at an interval of 3, 6, and 9 d after 30 d of planting. Results …

Comparative Effects Of Organic-Based Seed Treatments On Seed Viability And Vigor Of Rice (Oryza Sativa L.) Varieties, Cielo Luz C. Mondejar

The Philippine Agricultural Scientist

Access to high-quality rice seeds remains limited for small and marginal farmers due to high costs, while traditional rice varieties favored by many farmers often suffer from poor seed viability. Seed treatment presents a practical and low-cost approach to enhance seed performance. This study conducted 2 independent experiments to evaluate the effectiveness of 3 organic-based seed treatments: vermitea, a Trichoderma solution, and a water hyacinth decoction. In the first experiment, seeds from 4 traditional rice varieties (Redrice, Dinorado, Calatrava, and Arabon) were treated with distilled water (control) and 75% dilute solutions of each treatment. The second experiment involved different seed …

Oviposition Preference Of The Asian Corn Borer, Ostrinia Furnacalis (Guenée) (Lepidoptera: Crambidae), Towards Bt And Non-Bt Corn, And Under Confined Conditions, Merdelyn T. Caasi-Lit, Jessica B. Baroga-Barbecho, John David C. Cortez, Edwin A. Benigno

The Philippine Agricultural Scientist

Several experiments were conducted on the ovipositional preference and behavior of the Asian corn borer (ACB), Ostrinia furnacalis (Guenée). Confirmatory tests were conducted in table cages (1.5 m²) to determine if the results would align with those obtained from experiments on semi-field (285 m²) and mini-screen cage (90 m²) spatial scales. Preference for Bt and non-Bt corn was then observed under confined conditions. Table cage test results showed similar oviposition behavior to that observed in prior studies on larger test areas. There is no preference for either Bt or non-Bt corn plants. ACB adults …

Basic Studies On The Asian Corn Borer, Ostrinia Furnacalis (Guenée), Are Crucial For Insect Resistance Management For Bt Corn In The Philippines, Merdelyn T. Caasi-Lit, Aimee Lynn A. Barrion-Dupo

The Philippine Agricultural Scientist

The Philippines is considered to be “at the forefront of biotech research and commercialization in Southeast Asia and a model for science-based and thorough regulatory policy in the region” (ISAAA 2016). This is evident in the country's pioneering adoption of Bt corn technology in Asia and in the effective handling and implementation of rules and regulations on biosafety and the application of transgenic crops through the regulatory function of the Bureau of Plant Industry (BPI) under the Department of Agriculture.

Patch Mow Grazing: Investigating The Effects Of Mowing On Forage Nutritive Value, The Biomass–Nutritive Value Relationship, And Herbivore Selection, Trace R. Stauble

Department of Agronomy and Horticulture: Dissertations, Theses, and Student Research

Herbivore foraging behavior plays a critical role in shaping grassland structural heterogeneity, with selection often driven by forage biomass and nutritive value. Currently, it is thought that herbivores primarily select areas that are greater in nutritive value, and low in biomass. More specifically, disturbances like fire and grazing have been thoroughly studied showing that recently burned and grazed areas are not only higher in nutritive value but disproportionately selected by herbivores in comparison to undisturbed areas. However, most studies address only narrow ranges of defoliation, comparing intensely defoliated sites (< 10 cm) to those that are either not defoliated or have experienced a much longer time since defoliation, thereby decreasing grazing pressure as biomass increases. However, one of the most widely used methods of defoliation in grasslands, mowing, hasn’t been thoroughly studied for its effects on nutritive value, and how it impacts herbivore selection. Our study aimed to (1) evaluate how mowing treatments—i.e., short (5 cm), medium (18 cm), and tall (>30 cm, unmown)—affect nutritive value and herbivore selection, (2) assess …

Cover Crop Influence On Arthropod Biodiversity And Soil–Water Dynamics In A Semi-Arid Maize–Soybean Sequence Of The Nebraska High Plains, Carlos Eduardo De Oliveira Martins

Department of Agronomy and Horticulture: Dissertations, Theses, and Student Research

With the expansion of cover crop (CC) use in semi-arid regions, producers in the Nebraska High Plains are increasingly interested in understanding how CCs influence both beneficial arthropods and soil-water within maize-soybean (Zea mays L., Glycine max [L.] Merr.) rotations. Integrating CCs in these systems can enhance soil water availability and beneficial insect activity, but potential trade-offs include higher early-season water use by CCs and the risk of increasing potential pest populations. This thesis addresses these questions through two complementary studies conducted under field conditions near Brule, Nebraska. The first study evaluated the effects of a multi-species CC mixture …

Assessing Crop Rotation Productivity, Soil Health, And Fertility, And Economic Performance, To Enhance Semi-Arid High Plains Cropping Systems Sustainability, Ezequiel Maria Villamil

Dissertations and Doctoral Documents, University of Nebraska-Lincoln, 2023–

Sustainable crop production in the semi-arid High Plains of Nebraska faces challenges from limited precipitation, high interannual variability, and economic risk. This dissertation investigates the long-term productivity, water use, soil health, and economic sustainability of dryland crop rotations, with emphasis on the role of pulses as alternatives to fallow.

Chapter 1 analyzes nearly three decades (1995–2023) of on-farm data from the High Plains Agricultural Laboratory (Sidney, Nebraska) to compare seven crop rotations, including wheat, corn, millet, sunflower, and field peas. Results showed that wheat–corn–fallow (W–C–F) consistently outperformed traditional wheat–fallow (W–F) and more intensified four-year rotations, providing the highest grain yields, …

Nutrient Utilization Efficiency And Antioxidant Profile Of Bc2 Abaca (Musa Textilis Née) Hybrids, Roberto Barba Jr, Antonio Lalusin

The Philippine Agricultural Scientist

Abaca (Musa textilis Née) is an important fiber crop widely recognized for its superior tensile strength, yet its productivity remains constrained by nutrient inefficiency, poor cropping management, and climatic stresses under manual production systems. Efficient nutrient utilization and an understanding of antioxidant compositions are practically relevant to the productivity of the abaca fiber crop. However, despite the crop’s economic importance, limited studies have examined nutrient uptake dynamics and internal utilization efficiency related to fiber synthesis. This study aimed to demonstrate the nutrient utilization efficiency and antioxidant profiles of BC₂ abaca hybrids in relation to fiber yield and quality. Fiber …

Evaluating Metamitron Efficacy For Glyphosate-Resistant Palmer Amaranth (Amaranthus Palmeri) Management In Sugarbeet Across The Central High Plains, Abraham Akuoko

Department of Agronomy and Horticulture: Dissertations, Theses, and Student Research

Herbicide-resistant (HR) Palmer amaranth (Amaranthus palmeri S. Watson) is regarded as one of the most prominent weeds within sugarbeet fields across the Central High Plains, with limited chemical control options. Although a few herbicides are available, their use is restrictive due to crop injury concerns and can only be applied at or after the 2–4 true leaf (TL) growth stage, which will provide no control for already emerged weeds. However, Palmer amaranth often emerges between sugarbeet planting and the 2 TL sugarbeet growth stage. Consequently, as of 2023, there were no herbicide options to control Palmer amaranth in sugarbeet …

Proso Millet In Us High Plains Dryland Agriculture: Systems Resilience, Phenology, And Consumer Preferences For Alternative Grains, Pratiksha Baishya

Dissertations and Doctoral Documents, University of Nebraska-Lincoln, 2023–

Dryland crop production in Nebraska's semi-arid High Plains faces challenges from fluctuating weather impacts of climate change, including extreme temperatures, short growing seasons, and recurring droughts. Proso millet is an alternative crop used to build a more robust three-year rotation in the region, rather than the traditional two-year wheat-fallow cycle. This dissertation provides a systems-level assessment of proso millet, a climate-resilient crop with great potential to support sustainable cropping systems in the US High Plains. Using a field-to-consumer approach, it highlights its agronomic and environmental advantages in dryland rotations, develops a phenological framework to aid future research on production, crop …

Evaluation Of The Suitability Of Tomato (Solanum Lycopersicum L.) Accessions Grown In A Vertical Container System, Darel Kenth S. Antesco, Lourdes Edano Ma., Renerio Gentallan Jr, Roselyn F. Paelmo, Annalissa L. Aquino

The Philippine Agricultural Scientist

Growing tomatoes in vertical container systems such as hanging pots presents a promising production system for urban gardening. However, horticultural selections of tomato with traits suited for this system are still limited. The success of different genotypes grown in this system depends on the combination of morphological characters, including plant form, vegetative growth, and root development, as well as yield. This study assessed the morphological characters of 10 tomato accessions to identify those with ideal traits for this system. Results showed that some accessions possess unique traits that enhance their performance in hanging pots. Among the 10 accessions, T2 from …