Ecology and Evolutionary Biology Commons^™

The Genomic Landscape Of Molecular Responses To Natural Drought Stress In Panicum Hallii., John T. Lovell, Jerry Jenkins, David B. Lowry, Sujan Mamidi, Avinash Sreedasyam, Xiaoyu Weng, Kerrie Barry, Jason Bonnette, Brandon Campitelli, Chris Daum, Sean P. Gordon, Billie A. Gould, Albina Khasanova, Anna Lipzen, Alice Macqueen, Juan Diego Palacio-Mejía, Christopher Plott, Eugene V. Shakirov, Shengqiang Shu, Yuko Yoshinaga, Matt Zane, Dave Kudrna, Jason D. Talag, Daniel Rokhsar, Jane Grimwood, Jeremy Schmutz, Thomas E. Juenger

Biological Sciences Faculty Research

Environmental stress is a major driver of ecological community dynamics and agricultural productivity. This is especially true for soil water availability, because drought is the greatest abiotic inhibitor of worldwide crop yields. Here, we test the genetic basis of drought responses in the genetic model for C4 perennial grasses, Panicum hallii, through population genomics, field-scale gene-expression (eQTL) analysis, and comparison of two complete genomes. While gene expression networks are dominated by local cis-regulatory elements, we observe three genomic hotspots of unlinked trans-regulatory loci. These regulatory hubs are four times more drought responsive than the genome-wide average. Additionally, cis- and trans-regulatory …

Ncer Assistance Agreement Annual Progress Report For Grant #83582401 - Assessment Of Stormwater Harvesting Via Manage Aquifer Recharge (Mar) To Develop New Water Supplies In The Arid West: The Salt Lake Valley Example, Ryan Dupont, Joan E. Mclean, Richard C. Peralta, Sarah E. Null, Douglas B. Jackson-Smith

Civil and Environmental Engineering Faculty Publications

The goals of the original proposed project remain the same, that is, to test the hypothesis that Managed Aquifer Recharge (MAR) for stormwater harvesting is a technically feasible, socially and environmentally acceptable, economically viable, and legally feasible option for developing new water supplies for arid Western urban ecosystems experiencing increasing population, and climate change pressures on existing water resources. The project is being carried out via three distinct but integrated components that include: 1) Monitoring of existing distributed MAR harvesting schemes involving a growing number of demonstration Green Infrastructure (GI) test sites; 2) Integrated stormwater/vadose zone/groundwater/ ecosystem services modeling; and …

Long-Term Trends Of Stream Fish Community Assemblages In Southern Missouri With Contemporary Land Use Impacts, Stephanie Marie Sickler

MSU Graduate Theses

Stream fish communities in the Ozarks are structured via a number of different mechanisms, including basin, stream size, and human land use. The purpose of this study was to understand the structuring mechanisms of stream fish communities in southern Missouri. I compiled 48 years of historical fish collections performed by the Ichthyology class at Missouri State University consisting of 140 sites. I resampled 45 of these sites in summer of 2016. First, I tested whether communities are different between basins and stream size. Next, I tested associations of land use at three spatial scales to local fish communities. Last, I …

Salmon-Safe Farms, Ellen Southard, Amelia Bahr

Salish Sea Ecosystem Conference

Stewardship Partners recognizes the crucial role farmers play in the protection of our watersheds and salmon populations, leading us to implement the Salmon-Safe program in Washington in 2004 to support landowners who are promoting and practicing sustainable land management to combat environmental degradation. To date, we have added more than 100 different Washington State farms and vineyards to the program — ensuring the restoration and maintenance of watershed health across tens of thousands of agricultural acres. Since the major salmon streams in the Puget Sound basin flow through the most productive agricultural valleys, conservation efforts aimed at protecting salmon and …

Listening To Farmers: The Farming In The Floodplain Project, Spencer Easton

Salish Sea Ecosystem Conference

The Farming in the Floodplain Project (FFP) is an effort to engage farmers in the Clear Creek area, just east of Tacoma, in the planning and design of a multiple-benefit floodplain reconnection project. The foundation of the FFP is to understand and document technical information on the needs of the agricultural community in the area so that those needs can be incorporated into the project. Environmental Science Associates (ESA) conducted technical work on the FFP on behalf of PCC Farmland Trust. Over the course of the FFP, we learned to let the viewpoints of farmers guide how we conducted our …

Soil Conductivity Study And Implications For Fish And Farming Compatibility In The Swinomish Agricultural Area, Nicole Casper, Todd A. Mitchell, Karen J.R. Mitchell, Jason J. Thompson

Salish Sea Ecosystem Conference

The Swinomish agricultural area, along the Swinomish Channel, is part of the Skagit River Delta, a major agrarian region in Puget Sound. Historically a complex system of tidal channels serving as salmon habitat, the tidelands have since been diked and drained. In 2005, the Swinomish Indian Tribal Community (SITC) began restoration to demonstrate compatibility of fish habitat and agriculture. Muted tidal regulators (MTRs) operated to optimize tidal inundation and fish passage, replaced traditional tidegates, and prompted a study to evaluate soil conductivity impacts on agriculture. Objectives included electromagnetic (EM) surveying of soil conductivity, qualitatively assessing EM results utilizing two additional …

Integrating Watershed-Scale And River-Reach Protection And Restoration Planning To Promote Climate Resilience In The South Fork Nooksack River (Sfnr), Oliver Grah, Susan Dickerson-Lange

Salish Sea Ecosystem Conference

The Nooksack Indian Tribe reservation is located at the foot of the North Cascades Mountains, approximately 13 miles east of Bellingham, WA and the Salish Sea. The Tribe relies on a harvestable surplus of Pacific salmon in the Nooksack River for cultural, subsistence, and commercial purposes. Today, Pacific salmon runs are less than 10 percent of the runs in the late 1800’s. Causes of the declines are complex; however, it is well understood that the legacy of commercial forestry, agriculture, and development has increased sediment loading and water temperature. Climate impacts will cumulatively add to the legacy impacts, which are …

Integrated Agricultural Riparian Stewardship In The Stillaguamish And Snohomish Watersheds, Kristin Marshall, Cindy Dittbrenner, Carrie Byron, Colin Hume

Salish Sea Ecosystem Conference

The Stillaguamish and Snohomish River watersheds are regionally important to the health of Puget Sound and the Salish Sea and in particular for the recovery of salmon. The habitat gains needed to achieve salmon recovery in these watersheds include much of the agricultural landscape in Snohomish County, a situation that often results in conflicts between salmon recovery and agricultural communities. The Snohomish Conservation District’s National Estuary Program-funded Integrated Riparian Stewardship project is one of several efforts aimed at simultaneously achieving agricultural land preservation and salmon habitat protection and restoration in one of the fastest growing counties in the United States, …

Solution & Effects Of Agricultural Practices, Ryan Talusan '20, Caitlyn Castillo '20

UN Sustainable Development Goals Infographics

A potential solution of vertical farming

• PROFITABLE
• SCALABLE
• YEAR-ROUND

Agricultural Practices Destroying The Environment, Ayan Mallik '20, Ethan Talreja '20

UN Sustainable Development Goals Infographics

• 50% of the world's habitable land has been converted for farming (Farming: Habitat Conversion, 2017)
• Indonesia rain forests have been cleared for the construction of palm oil plantations
• This threatens the habitats of endangered species such as the Asian elephant

Agricultural Information Needs And Food Access In The Stann Creek District Of Belize, Sam E. Harris, Donna L. Graham

Discovery, The Student Journal of Dale Bumpers College of Agricultural, Food and Life Sciences

The purpose of this study was to describe agricultural information sources available to farmers and to describe food access and availability for the people of Dangriga, Stann Creek, Belize. This study used descriptive survey research methods with convenience sampling of the general public (n=22) and of farmers (n = 38) in the summer of 2017. Farmers use a variety of agricultural information sources with the extension service cited most often, followed by friends and fellow farmers. Weather, lack of information, pests, and inadequate access to capital were of primary concern for farmers. Face-to-face meetings were used most often by extension …

No Farm Is An Island: Pollinators And Pollination In Agricultural Landscapes, Charles C. Nicholson

Graduate College Dissertations and Theses

Productive, resilient and sustainable agricultural systems are required to meet the immediate needs of a burgeoning human population, while avoiding ecosystem collapse. Agriculture provides food, fiber, fuels and other products for our current population of 7 billion and is still the major livelihood for 40% of people worldwide. By replacing natural habitat and employing chemical inputs, agriculture also negatively impacts biodiversity and impairs the provision of ecosystem services. This poses a challenge for agriculture as these impacted services are often those required for high yielding and high-quality crop production. Evidence is accumulating that agricultural management can safeguard biodiversity and ecosystem …