Cell and Developmental Biology Commons^™

All Nuts And No Bolts: The Evolution Of Undergraduate Research At A Small State School, James Hawker

Florida Statewide Symposium: Best Practices in Undergraduate Research

In fall of 2017, students first started doing research with their biology instructor, and just a few terms later, two students have earned Portz Interdisciplinary Fellowships. In some ways, the program is going well with students participating in high numbers, but organizers still have questions about the “nuts and bolts” of establishing the program within the institution. Enthusiasm is high! However, key metrics are not being tracked and the workload needs to be distributed more evenly. The organizers will be talking with the audience about different ways to integrate UGR into the institution.

Sperm Motility In Groups, Julie Simons

Annual Symposium on Biomathematics and Ecology Education and Research

No abstract provided.

Modeling Collective Migration Of Neural Crest Cells With A Cucker-Smale Velocity Alignment Process, Claire Evensen

Annual Symposium on Biomathematics and Ecology Education and Research

No abstract provided.

Regulation Of Endoplasmic Reticulum Stress Sensitivity By Torc1 Signalling In Yeast, Khadija Ahmed, Patrick Lajoie

Western Research Forum

Incorrect folding of secretory proteins in the endoplasmic reticulum (ER) results in an aberrant accumulation of misfolded proteins (ER stress) and activates a coping mechanism known as the unfolded protein response (UPR). While the mechanisms of UPR activation have been well established, how it integrates with other stress responses remains unclear.

Given that TORC1 is an important regulator of cell growth during protein misfolding stress, we sought to investigate how TORC1 signalling acts in parallel with the UPR to regulate ER stress sensitivity. Our studies employ the budding yeast, Saccharomyces cerevisiae, a biochemically traceable model organism that allows for …

Uncovering The Role Of Ovol1 In Placental Stem Cell Differentiation Using Saccharomyces Cerevisiae, Maram Albakri, Patrick Lajoie, Stephen Renaud, Gargi Jaju, Hazel Dhaliwal

Western Research Forum

OVOL1 is a conserved transcription factor involved in regulating cytrophoblast differentiation in the placenta. Our objective for this study is to use Saccharomyces cerevisiae to uncover the role of OVOL1 in placental stem cell differentiation and proliferation. Previous research suggests that OVOL1 regulates cytotrophoblast progenitor state by regulating genome acetylation. Therefore, our study aims to determine how OVOL1 effect yeast growth and the yeast acetylome, and to use the yeast model to determine downstream targets of OVOL1. In order to understand the role of OVOL1, we will develop a yeast model and employ growth assays to assess growth defects and …

Knocking Out A Negative Regulator Of Hedgehog Signaling Blocks Differentiation Of Cells Into Neurons, Danielle Margaret Spice, Gregory M. Kelly Ph.D.

Western Research Forum

Hedgehog (Hh) signaling, one of many different protein signaling pathways found in mammals, is vital in many stage of neural development. A major negative regulator of Hh signaling is a protein known as Suppressor of Fused (SUFU), which acts to sequester the full length Gli transcription factors, proteins that can turn genes on and off, in the cytoplasm or facilitates its conversion to a repressive form. The P19 embryonal carcinoma cell line is a model of hind-brain neuronal differentiation and the involvement of Hh signaling, in particular the role of SUFU in this process has yet to be explored. We …

Network Analyses Of Glomerular Capillaries, Jason Cory Brunson, Justin Sardi, Mark Terasaki

Biology and Medicine Through Mathematics Conference

No abstract provided.

Times Of Action And Evolutionary Conservation Of Heterochronic Genes, Maria Ivanova, Eric G. Moss

Rowan-Virtua Research Day

Specific genes called heterochronic genes control the timing and sequence of developmental events during larval stages of C. elegans. Mutations in heterochronic genes can cause skipping or reiteration of cell fates associated with certain larval stages. lin-14 and lin-28 are two well-studied heterochronic genes. LIN-14 acts during the first larval stage (L1) and controls events of the L1 and L2 stages, LIN-28 acts during the L2 stage and controls its events.

Yfmk Is A Novel Nε-Lysine Acetyltransferase That Directly Acetylates The Histone-Like Protein Hbsu In Bacillus Subtilis, Valerie J. Carabetta, Todd M. Greco, Ileana M. Cristea, David Dubnau

Rowan-Virtua Research Day

Recently, N^e-lysine acetylation was realized to be a prevalent bacterial post-translational modification (PTM), contrary to the historical notion that this was a rare occurrence. Acetylation can impact protein function in multiple ways, by modifying conformation, interactions, subcellular localization or activity. In bacteria, hundreds of proteins are known to be acetylated, including those involved essential processes such as DNA replication, nucleoid organization, translation, cell shape, central carbon metabolism, and even several virulence factors. Despite the growing recognition that numerous proteins are acetylated, the biological significance of the vast majority of these modifications in any bacteria remains largely unknown. Previously, …

The Function Of Ecdysone And Inhibiting Programmed Cell Death In Death Class Iii Neurons Of Drosophila Melanogaster, Nikolas Richard Likourentzos

EURēCA: Exhibition of Undergraduate Research and Creative Achievement

The inhibition of programmed cell death is a factor believed to be responsible for the survival of cancer cells. Using Drosophila as models, factors contributing to the process of programmed cell death can be studied. Neurons die throughout Drosophila melanogaster development to allow the addition of new neurons. The groups of neurons programmed to die are Death Class I neurons, Death Class II neurons, and Death Class III neurons. Ecdysone is a hormone responsible for the timing of programmed cell death (PCD) in the Death Class neurons. Elevated levels of ecdysone are associated with the initiation of PCD of Death …

A Cell Cycle Cue Triggers Cell Growth Resumption After Division, Afton R. Russell

EURēCA: Exhibition of Undergraduate Research and Creative Achievement

The decoupling of the fundamental processes of cell division and growth is important for maintaining cell integrity. Through a chemical approach, we delayed the clock that controls when cells separate, uncoupling cell division and cell growth. This led to polarized cell growth before the cells completed separation. Using fluorescent markers to denote the cell’s stage in the cell cycle, we observed that only cells that were in mitosis exhibited this uncoupling. Previously it was thought that growth resumption occurred after completion of cell division, but this observation suggests that growth is triggered earlier, from a mitotic cue. This mitotic cue …

Hexavalent Chromium: Elucidating Its Carcinogenic Mechanism, And Testing Potential Preventative Treatments, Ryan Himes, Timothy Mayotte

Scholar Week 2016 - present

Cr(VI) (hexavalent chromium) has recently been found in the drinking water of over 250 million Americans. It is a powerful oxidizing agent, and is known to cause cancer, although the specific mechanism has yet to be elucidated. There is no known preventative treatment for Cr(VI) exposure, and the US EPA is currently determining what concentration of Cr(VI) in drinking water can be safely tolerated. This study sought to test the hypothesis that Cr(VI) cytotoxicity can be prevented by various antioxidants. We tested this hypothesis by exposing human embryonic kidney and human intestinal epithelial cells to Cr(VI), with and without the …

Alpha Mangostin As A Chemoprotective Agent Via Activation Of The P53 Pathway For Breast Cancer, Vanessa Van Oost

Scholar Week 2016 - present

Breast carcinoma is the most frequently diagnosed cancer among women and causes over 400,000 deaths yearly worldwide. Current treatments such as chemotherapy are not selective for cancerous tissues but are destructive to normal tissues as well. This causes a range of side effects including pain, nausea, hair loss, weakness, and more. Inactivation of p53 is an almost universal mutation within human cancer cells. The ability to activate the p53 pathway which protects cells from tumor formation is lost in 50% of cancers. Due to the prevalence of this mutation, p53 is a uniquely valuable target for applied research. Alpha mangostin …

Therapeutic Peptide Sequences And Gatekeepers Loaded With Mesoporous Silica Nanoparticles, Dursitu Hassen

Kansas State University Undergraduate Research Conference

The research community is developing and looking into new ways of effectively delivering anti-cancer treatment. According to National Cancer Institute over 1.5 million new cases of cancer are predicted in the United States, just alone in 2018. The major hurdles that have been identified by scientists are finding mechanisms that assist in decreasing the side effects of cancer treatment and to increase the effectiveness of the drug. In our lab, a highly toxic peptide sequence, SA-K₆L₉-AS is encapsulated in MSNs (mesoporous silica nanoparticles) and capped with a gatekeeper. The function of a gatekeeper is preventing the …

Establishment Of 3-D Human Colorectal Cancer Spheroids, India Barnett

Kansas State University Undergraduate Research Conference

Three-Dimensional (3D) cell culture plays an important role in cancer biology by providing a life-like microenvironment as a model for drug discovery and treatment. Hydrogels, like many other 3D scaffolds, demonstrate a unique property as matrices for 3D cell culture. The goal of this project is to establish a 3D cell culture for colorectal cancer and apply this 3D model to drug testing. Colorectal cancer is one of the most common cancers in the United States with an early detection rate of 39%. Previously, 2D cell culture of human colorectal cancer cells, SW480, was used to determine the efficacy of …

A Screen For Genetic Modifiers Of Protein Phosphatase 1 Function In Drosophila Collective Cell Cohesion And Migration, Carmen F. Del Real, Yujun Chen, Marissa Komp, Jocelyn A. Mcdonald

Kansas State University Undergraduate Research Conference

Cells can migrate collectively in tightly or loosely-associated groups during tissue and organ formation, during embryonic development, in tumor metastases, and in wound healing. Drosophilaborder cellsserve as an excellent genetic model of collective cell migration inside a developing tissue. During ovarian development, 6-8 cells form the border cell cluster and migrate together as a cohesive group to reach the large oocyte. Previous experiments have shown that Nuclear inhibitor of Protein Serine Threonine Phosphatase 1 (NiPP1) causes border cells to separate into single cells, rather than stay in a group, and limits their ability to migrate. NiPP1 inhibits the …

Tetrahymena Thermophila Lack A Homologue Of The Caenorhabditis Elegans Lin-4 Mirna, Bryce H. Childers, Sorrel Paris, Emma Wessels, Heather G. Kuruvilla

The Research and Scholarship Symposium (2013-2019)

The netrin family of proteins was first discovered because of their role in axonal guidance during development. Netrin homologues are important developmental signals in organisms ranging from vertebrates to the nematode, Caenorhabditis elegans, and netrin-like proteins have even been found in the ciliated protozoan, Tetrahymena thermophila. Since the lin-4 miRNA regulates netrin signaling in C. elegans, we hypothesized that a lin-4 homologue might exists in Tetrahymena thermophila. In order to test this hypothesis, we purified total miRNA from T. thermophila, used this miRNA to make cDNA, then used RT-PCR to quantitate the amount of lin-4 specific cDNA we obtained. Our …

Recombinant Netrin-4 Does Not Signal Through The Netrin-1 Or Netrin-3 Pathway In Tetrahymena Thermophila, Nicholas Bradley, Heather G. Kuruvilla

The Research and Scholarship Symposium (2013-2019)

Netrin 4 protein and its homologs are found throughout the animal kingdom. Netrin-4 is known to have a protective role against vascular damage. Previous studies have shown that human netrin-1 has a role in angiogenesis. This information about human netrin-1 and netrin-4 led us to research the pathway of netrin-4 in Tetrahymena thermophila. Our previous studies of the netrin proteins show that netrin-1 and netrin-3 are both repellents in Tetrahymena thermophila. The data in this study show that netrin-4 is also a repellent of Tetrahymena thermophila. These data suggest that netrin-4 could signal through the same pathway as netrin-1 and …

Arterial Distribution Of The Human Aorta: An Examination Of The Evolutionary, Developmental, And Physiological Bases Of Asymmetry., Brandon Oddo, Cooker Storm

Seaver College Research And Scholarly Achievement Symposium

The study of anatomy contends that “form follows function”; a disciplinary theme purporting that anatomical structures (i.e., cells, tissues, and organs) have a shape that serves its proper function. With this in mind, it is unclear why human arterial distribution off the aortic arch is asymmetrical, while the corresponding venous anatomy is symmetrical. We investigated the evolutionary, developmental, and physiological bases for the asymmetry of aortic arch branches in humans. First, we investigated the cardiovascular anatomy of ancestral species to determine if, and at what level, anatomical divergence (from aortic symmetry to asymmetry) occurs. Second, we examined the formation of …

Ultrafine Carbon Nanoparticles Activate Inflammasome Signaling And Cell Death In Murine Macrophages, Alexander Soloniuk, Hadley Lamascus, Jay Brewster, John Mann

Seaver College Research And Scholarly Achievement Symposium

Carbon black (CB) is the primary nanoparticulate component of air pollution from fossil fuel combustion. This work examines the cellular impact of ultrafine carbon (carbon black, CB) nanoparticles, that range in size down to 30 nm, upon murine macrophages. The size analysis of the carbon black nanoparticles was performed using atomic force microscopy (AFM) and transmission electron microscopy (TEM) techniques. RAW246.7 macrophage cells were exposed to CB doses ranging from 50 – 200 ug/ml in complete media. Analysis of cell survival over time revealed elevated rates of significant nuclear degradation and cell lifting after 48 hours of exposure, and in …

Analyzing Neuronal Dendritic Trees With Convolutional Neural Networks, Olivier Trottier, Jonathon Howard

Yale Day of Data

In the biological sciences, image analysis software are used to detect, segment or classify a variety of features encountered in living matter. However, the algorithms that accomplish these tasks are often designed for a specific dataset, making them hardly portable to accomplish the same tasks on images of different biological structures. Recently, convolutional neural networks have been used to perform complex image analysis on a multitude of datasets. While applications of these networks abound in the technology industry and computer science, use cases are not as common in the academic sciences. Motivated by the generalizability of neural networks, we aim …

A Three State Model Can Explain The Dynamics Of Class Iv Drosophila Dendritic Tips, Sabyasachi Sutradhar

Yale Day of Data

No abstract provided.

Exploring The Ipf Lung Through The Lens Of Single Cell Rna Sequencing, Taylor Adams, Jonas Schupp

Yale Day of Data

This poster illustrates the differences between the IPF disease-specific variety of lung macrophages and the two varieties of macrophages known to reside in the normal human lung.